SNF2 domain-containing protein CLASSY
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G42670 AT3G42670 AT3G42670 AT3G42670 AT5G20420 |
| fragaria_vesca | FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 |
| prunus_persica | Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 |
| pyrus_communis | pycom07g20580 |
| rosa_chinensis | RchiOBHm_Chr1g0371111 |
| rosa_laevigata | RLG00000026985 |
| rosa_multiflora | Rmu_sc0003714.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00285980 |
| rosa_rugosa | Rorug01G0361300 Rorug01G0361300 Rorug01G0361400 Rorug01G0361500 Rorug01G0361500 |
| rosa_samantha | Rh1AG371800 Rh1BG335000 Rh1CG348400 Rh1DG366300 |
| rosa_wichuraiana | Rw1G032690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1457 |
| Acc16I | TGCGCA | 1 cut(s) | 3439 |
| Acc36I | ACCTGC | 2 cut(s) | 1457, 1794 |
| AccB1I | GGYRCC | 1 cut(s) | 2776 |
| AccI | GTMKAC | 1 cut(s) | 2956 |
| AccII | CGCG | 2 cut(s) | 1021, 1399 |
| AciI | CCGC | 7 cut(s) | 197, 907, 1399, 1982, 3137, 3459, 3665 |
| AclI | AACGTT | 1 cut(s) | 2001 |
| AcsI | RAATTY | 5 cut(s) | 360, 1579, 2747, 3125, 3383 |
| AcuI | CTGAAG | 6 cut(s) | 1629, 1953, 2007, 2103, 3002, 3050 |
| AcyI | GRCGYC | 1 cut(s) | 2777 |
| AdeI | CACNNNGTG | 1 cut(s) | 2767 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1561, 2120, 2162, 2299 |
| AflII | CTTAAG | 2 cut(s) | 2024, 2632 |
| AflIII | ACRYGT | 1 cut(s) | 2038 |
| AgeI | ACCGGT | 2 cut(s) | 280, 3341 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 123 |
| AjnI | CCWGG | 5 cut(s) | 1359, 2155, 2950, 3394, 3417 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 429, 461, 680, 712, 2213, 2245 |
| AleI | CACNNNNGTG | 1 cut(s) | 1169 |
| Alw21I | GWGCWC | 2 cut(s) | 1767, 2803 |
| Alw26I | GTCTC | 7 cut(s) | 185, 844, 1256, 1634, 1874, 2876, 3637 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2090 |
| Ama87I | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| AoxI | GGCC | 3 cut(s) | 227, 2607, 3420 |
| ApeKI | GCWGC | 4 cut(s) | 378, 1523, 3080, 3461 |
| ApoI | RAATTY | 5 cut(s) | 360, 1579, 2747, 3125, 3383 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 163, 195, 2486, 2518 |
| AseI | ATTAAT | 1 cut(s) | 2012 |
| AsiGI | ACCGGT | 2 cut(s) | 280, 3341 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2862, 3302 |
| AspLEI | GCGC | 3 cut(s) | 2779, 3268, 3440 |
| AspS9I | GGNCC | 3 cut(s) | 831, 1352, 1872 |
| AsuC2I | CCSGG | 5 cut(s) | 2217, 2218, 2547, 2548, 3540 |
| AsuHPI | GGTGA | 7 cut(s) | 998, 1375, 1643, 2145, 2501, 2951, 3356 |
| AsuII | TTCGAA | 2 cut(s) | 1740, 3387 |
| AvaI | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| AvaII | GGWCC | 3 cut(s) | 831, 1352, 1872 |
| BamHI | GGATCC | 2 cut(s) | 2110, 3667 |
| BanI | GGYRCC | 1 cut(s) | 2776 |
| BanII | GRGCYC | 1 cut(s) | 2803 |
| BauI | CACGAG | 3 cut(s) | 263, 3525, 3634 |
| BbsI | GAAGAC | 5 cut(s) | 708, 966, 1580, 2499, 3603 |
| Bbv12I | GWGCWC | 2 cut(s) | 1767, 2803 |
| BbvI | GCAGC | 4 cut(s) | 365, 1535, 3092, 3448 |
| BccI | CCATC | 8 cut(s) | 101, 486, 625, 977, 1321, 1622, 3412, 3679 |
| BceAI | ACGGC | 1 cut(s) | 901 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2807, 2841 |
| BciT130I | CCWGG | 5 cut(s) | 1361, 2157, 2952, 3396, 3419 |
| BciVI | GTATCC | 2 cut(s) | 269, 3057 |
| BclI | TGATCA | 2 cut(s) | 478, 3753 |
| BcnI | CCSGG | 5 cut(s) | 2217, 2218, 2547, 2548, 3540 |
| BcoDI | GTCTC | 7 cut(s) | 185, 844, 1256, 1634, 1874, 2876, 3637 |
| BfaI | CTAG | 4 cut(s) | 666, 2196, 2414, 2703 |
| BfmI | CTRYAG | 4 cut(s) | 309, 487, 2957, 3519 |
| BfoI | RGCGCY | 1 cut(s) | 2780 |
| BfrI | CTTAAG | 2 cut(s) | 2024, 2632 |
| BfuAI | ACCTGC | 2 cut(s) | 1457, 1794 |
| BfuI | GTATCC | 2 cut(s) | 269, 3057 |
| BglII | AGATCT | 4 cut(s) | 766, 2961, 3240, 3327 |
| BisI | GCNGC | 6 cut(s) | 198, 379, 1524, 1983, 3081, 3462 |
| BlsI | GCNGC | 6 cut(s) | 199, 380, 1525, 1984, 3082, 3463 |
| BmcAI | AGTACT | 3 cut(s) | 475, 1253, 2681 |
| Bme18I | GGWCC | 3 cut(s) | 831, 1352, 1872 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 123 |
| BmeT110I | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| BmgT120I | GGNCC | 3 cut(s) | 831, 1352, 1872 |
| BmiI | GGNNCC | 6 cut(s) | 279, 2097, 2112, 2778, 3497, 3669 |
| BmrI | ACTGGG | 1 cut(s) | 2288 |
| BmsI | GCATC | 6 cut(s) | 40, 283, 903, 2053, 2830, 2932 |
| BmuI | ACTGGG | 1 cut(s) | 2288 |
| BpiI | GAAGAC | 5 cut(s) | 708, 966, 1580, 2499, 3603 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 307, 339, 3617, 3649 |
| BpmI | CTGGAG | 3 cut(s) | 1799, 2092, 2178 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2019 |
| Bpu14I | TTCGAA | 2 cut(s) | 1740, 3387 |
| BpuEI | CTTGAG | 6 cut(s) | 747, 1225, 1639, 3074, 3149, 3371 |
| BpuMI | CCSGG | 5 cut(s) | 2217, 2218, 2547, 2548, 3540 |
| Bsa29I | ATCGAT | 1 cut(s) | 237 |
| BsaAI | YACGTR | 2 cut(s) | 827, 2603 |
| BsaBI | GATNNNNATC | 2 cut(s) | 795, 3245 |
| BsaHI | GRCGYC | 1 cut(s) | 2777 |
| BsaI | GGTCTC | 3 cut(s) | 844, 2876, 3637 |
| BsaJI | CCNNGG | 9 cut(s) | 373, 417, 1436, 1527, 2216, 2314, 2546, 2579, 3092 |
| BsaWI | WCCGGW | 7 cut(s) | 280, 853, 866, 1168, 2299, 2511, 3341 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 425, 455, 2914, 2944 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1561, 2120, 2162, 2299 |
| Bse118I | RCCGGY | 2 cut(s) | 280, 3341 |
| Bse1I | ACTGG | 5 cut(s) | 922, 1249, 1542, 1555, 2294 |
| Bse3DI | GCAATG | 2 cut(s) | 2181, 3261 |
| Bse8I | GATNNNNATC | 2 cut(s) | 795, 3245 |
| BseBI | CCWGG | 5 cut(s) | 1361, 2157, 2952, 3396, 3419 |
| BseCI | ATCGAT | 1 cut(s) | 237 |
| BseDI | CCNNGG | 9 cut(s) | 373, 417, 1436, 1527, 2216, 2314, 2546, 2579, 3092 |
| BseJI | GATNNNNATC | 2 cut(s) | 795, 3245 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1561, 2120, 2162, 2299 |
| BseMI | GCAATG | 2 cut(s) | 2181, 3261 |
| BseMII | CTCAG | 4 cut(s) | 196, 495, 3501, 3678 |
| BseNI | ACTGG | 5 cut(s) | 922, 1249, 1542, 1555, 2294 |
| BseRI | GAGGAG | 4 cut(s) | 1120, 1577, 2596, 3668 |
| BseXI | GCAGC | 4 cut(s) | 365, 1535, 3092, 3448 |
| BsgI | GTGCAG | 3 cut(s) | 496, 1485, 1830 |
| Bsh1236I | CGCG | 2 cut(s) | 1021, 1399 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2320 |
| BshFI | GGCC | 3 cut(s) | 229, 2609, 3422 |
| BshNI | GGYRCC | 1 cut(s) | 2776 |
| BshTI | ACCGGT | 2 cut(s) | 280, 3341 |
| BshVI | ATCGAT | 1 cut(s) | 237 |
| BsiEI | CGRYCG | 1 cut(s) | 2320 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1767, 2803 |
| BsiHKCI | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| BslFI | GGGAC | 2 cut(s) | 2529, 3555 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1561, 2120, 2162, 2299 |
| BsmAI | GTCTC | 7 cut(s) | 185, 844, 1256, 1634, 1874, 2876, 3637 |
| BsmBI | CGTCTC | 1 cut(s) | 185 |
| BsmFI | GGGAC | 2 cut(s) | 2529, 3555 |
| BsmI | GAATGC | 2 cut(s) | 341, 3530 |
| BsnI | GGCC | 3 cut(s) | 229, 2609, 3422 |
| Bso31I | GGTCTC | 3 cut(s) | 844, 2876, 3637 |
| BsoBI | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| Bsp119I | TTCGAA | 2 cut(s) | 1740, 3387 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1767, 2803 |
| Bsp1407I | TGTACA | 1 cut(s) | 2256 |
| BspACI | CCGC | 7 cut(s) | 197, 907, 1399, 1982, 3137, 3459, 3665 |
| BspANI | GGCC | 3 cut(s) | 229, 2609, 3422 |
| BspCNI | CTCAG | 4 cut(s) | 195, 496, 3500, 3679 |
| BspDI | ATCGAT | 1 cut(s) | 237 |
| BspFNI | CGCG | 2 cut(s) | 1021, 1399 |
| BspHI | TCATGA | 3 cut(s) | 325, 2719, 3756 |
| BspLI | GGNNCC | 6 cut(s) | 279, 2097, 2112, 2778, 3497, 3669 |
| BspMI | ACCTGC | 2 cut(s) | 1457, 1794 |
| BspQI | GCTCTTC | 2 cut(s) | 2047, 2952 |
| BspT104I | TTCGAA | 2 cut(s) | 1740, 3387 |
| BspT107I | GGYRCC | 1 cut(s) | 2776 |
| BspTI | CTTAAG | 2 cut(s) | 2024, 2632 |
| BspTNI | GGTCTC | 3 cut(s) | 844, 2876, 3637 |
| BsrDI | GCAATG | 2 cut(s) | 2181, 3261 |
| BsrFI | RCCGGY | 2 cut(s) | 280, 3341 |
| BsrGI | TGTACA | 1 cut(s) | 2256 |
| BsrI | ACTGG | 5 cut(s) | 922, 1249, 1542, 1555, 2294 |
| BssAI | RCCGGY | 2 cut(s) | 280, 3341 |
| BssECI | CCNNGG | 9 cut(s) | 373, 417, 1436, 1527, 2216, 2314, 2546, 2579, 3092 |
| BssNI | GRCGYC | 1 cut(s) | 2777 |
| BssSI | CACGAG | 3 cut(s) | 263, 3525, 3634 |
| BssT1I | CCWWGG | 2 cut(s) | 373, 1527 |
| Bst2BI | CACGAG | 3 cut(s) | 263, 3525, 3634 |
| Bst2UI | CCWGG | 5 cut(s) | 1361, 2157, 2952, 3396, 3419 |
| Bst6I | CTCTTC | 3 cut(s) | 1314, 2047, 2952 |
| BstACI | GRCGYC | 1 cut(s) | 2777 |
| BstAFI | CTTAAG | 2 cut(s) | 2024, 2632 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1853 |
| BstAUI | TGTACA | 1 cut(s) | 2256 |
| BstBAI | YACGTR | 2 cut(s) | 827, 2603 |
| BstBI | TTCGAA | 2 cut(s) | 1740, 3387 |
| BstC8I | GCNNGC | 6 cut(s) | 1980, 2436, 2845, 3436, 3516, 3684 |
| BstDSI | CCRYGG | 4 cut(s) | 417, 1436, 2314, 3092 |
| BstFNI | CGCG | 2 cut(s) | 1021, 1399 |
| BstH2I | RGCGCY | 1 cut(s) | 2780 |
| BstHHI | GCGC | 3 cut(s) | 2779, 3268, 3440 |
| BstMAI | GTCTC | 7 cut(s) | 185, 844, 1256, 1634, 1874, 2876, 3637 |
| BstMCI | CGRYCG | 1 cut(s) | 2320 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 384, 913, 1853, 2785 |
| BstNI | CCWGG | 5 cut(s) | 1361, 2157, 2952, 3396, 3419 |
| BstNSI | RCATGY | 3 cut(s) | 2042, 2402, 2438 |
| BstSFI | CTRYAG | 4 cut(s) | 309, 487, 2957, 3519 |
| BstSNI | TACGTA | 2 cut(s) | 827, 2603 |
| BstUI | CGCG | 2 cut(s) | 1021, 1399 |
| BstV1I | GCAGC | 4 cut(s) | 365, 1535, 3092, 3448 |
| BstV2I | GAAGAC | 5 cut(s) | 708, 966, 1580, 2499, 3603 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3678 |
| Bsu15I | ATCGAT | 1 cut(s) | 237 |
| BsuI | GTATCC | 2 cut(s) | 269, 3057 |
| BsuRI | GGCC | 3 cut(s) | 229, 2609, 3422 |
| BsuTUI | ATCGAT | 1 cut(s) | 237 |
| BtgI | CCRYGG | 4 cut(s) | 417, 1436, 2314, 3092 |
| BtsIMutI | CAGTG | 4 cut(s) | 624, 1549, 1562, 3655 |
| BveI | ACCTGC | 2 cut(s) | 1457, 1794 |
| Cac8I | GCNNGC | 6 cut(s) | 1980, 2436, 2845, 3436, 3516, 3684 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2090 |
| CciI | TCATGA | 3 cut(s) | 325, 2719, 3756 |
| CfoI | GCGC | 3 cut(s) | 2779, 3268, 3440 |
| Cfr10I | RCCGGY | 2 cut(s) | 280, 3341 |
| Cfr13I | GGNCC | 3 cut(s) | 831, 1352, 1872 |
| Cfr9I | CCCGGG | 2 cut(s) | 2216, 2546 |
| ClaI | ATCGAT | 1 cut(s) | 237 |
| CseI | GACGC | 1 cut(s) | 3182 |
| CsiI | ACCWGGT | 1 cut(s) | 1359 |
| CspAI | ACCGGT | 2 cut(s) | 280, 3341 |
| DinI | GGCGCC | 1 cut(s) | 2778 |
| DraI | TTTAAA | 1 cut(s) | 1591 |
| DraIII | CACNNNGTG | 1 cut(s) | 2767 |
| DriI | GACNNNNNGTC | 1 cut(s) | 123 |
| Eam1104I | CTCTTC | 3 cut(s) | 1314, 2047, 2952 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 123 |
| EarI | CTCTTC | 3 cut(s) | 1314, 2047, 2952 |
| Ecl136II | GAGCTC | 1 cut(s) | 2801 |
| Eco105I | TACGTA | 2 cut(s) | 827, 2603 |
| Eco130I | CCWWGG | 2 cut(s) | 373, 1527 |
| Eco147I | AGGCCT | 1 cut(s) | 2609 |
| Eco24I | GRGCYC | 1 cut(s) | 2803 |
| Eco31I | GGTCTC | 3 cut(s) | 844, 2876, 3637 |
| Eco32I | GATATC | 3 cut(s) | 157, 235, 859 |
| Eco47I | GGWCC | 3 cut(s) | 831, 1352, 1872 |
| Eco53kI | GAGCTC | 1 cut(s) | 2801 |
| Eco57I | CTGAAG | 6 cut(s) | 1629, 1953, 2007, 2103, 3002, 3050 |
| Eco88I | CYCGRG | 7 cut(s) | 67, 1053, 2216, 2546, 2578, 2789, 3408 |
| EcoICRI | GAGCTC | 1 cut(s) | 2801 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1352 |
| EcoRII | CCWGG | 5 cut(s) | 1359, 2155, 2950, 3394, 3417 |
| EcoRV | GATATC | 3 cut(s) | 157, 235, 859 |
| EcoT14I | CCWWGG | 2 cut(s) | 373, 1527 |
| EcoT22I | ATGCAT | 1 cut(s) | 2400 |
| EcoT38I | GRGCYC | 1 cut(s) | 2803 |
| EgeI | GGCGCC | 1 cut(s) | 2778 |
| EheI | GGCGCC | 1 cut(s) | 2778 |
| ErhI | CCWWGG | 2 cut(s) | 373, 1527 |
| Esp3I | CGTCTC | 1 cut(s) | 185 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 523, 555, 1951, 1983, 3023, 3055 |
| FaqI | GGGAC | 2 cut(s) | 2529, 3555 |
| FauI | CCCGC | 1 cut(s) | 3144 |
| FauNDI | CATATG | 1 cut(s) | 3750 |
| FbaI | TGATCA | 2 cut(s) | 478, 3753 |
| FblI | GTMKAC | 1 cut(s) | 2956 |
| Fnu4HI | GCNGC | 6 cut(s) | 198, 379, 1524, 1983, 3081, 3462 |
| FriOI | GRGCYC | 1 cut(s) | 2803 |
| Fsp4HI | GCNGC | 6 cut(s) | 198, 379, 1524, 1983, 3081, 3462 |
| FspBI | CTAG | 4 cut(s) | 666, 2196, 2414, 2703 |
| FspI | TGCGCA | 1 cut(s) | 3439 |
| GlaI | GCGC | 3 cut(s) | 2778, 3267, 3439 |
| GluI | GCNGC | 6 cut(s) | 198, 379, 1524, 1983, 3081, 3462 |
| GsuI | CTGGAG | 3 cut(s) | 1799, 2092, 2178 |
| HaeII | RGCGCY | 1 cut(s) | 2780 |
| HaeIII | GGCC | 3 cut(s) | 229, 2609, 3422 |
| HgaI | GACGC | 1 cut(s) | 3182 |
| HhaI | GCGC | 3 cut(s) | 2779, 3268, 3440 |
| Hin1I | GRCGYC | 1 cut(s) | 2777 |
| Hin6I | GCGC | 3 cut(s) | 2777, 3266, 3438 |
| HinP1I | GCGC | 3 cut(s) | 2777, 3266, 3438 |
| HincII | GTYRAC | 2 cut(s) | 573, 1552 |
| HindII | GTYRAC | 2 cut(s) | 573, 1552 |
| HindIII | AAGCTT | 1 cut(s) | 2021 |
| HphI | GGTGA | 7 cut(s) | 998, 1375, 1643, 2145, 2501, 2951, 3356 |
| Hpy166II | GTNNAC | 8 cut(s) | 573, 1515, 1552, 2259, 2475, 2957, 3282, 3559 |
| Hpy8I | GTNNAC | 8 cut(s) | 573, 1515, 1552, 2259, 2475, 2957, 3282, 3559 |
| Hpy99I | CGWCG | 2 cut(s) | 2989, 3176 |
| HpyAV | CCTTC | 9 cut(s) | 233, 653, 2347, 2561, 2873, 2912, 3437, 3510, 3763 |
| HpyCH4IV | ACGT | 8 cut(s) | 124, 674, 826, 846, 2001, 2602, 3035, 3561 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 384, 913, 1853, 2785 |
| HpySE526I | ACGT | 8 cut(s) | 124, 674, 826, 846, 2001, 2602, 3035, 3561 |
| Hsp92I | GRCGYC | 1 cut(s) | 2777 |
| HspAI | GCGC | 3 cut(s) | 2777, 3266, 3438 |
| KasI | GGCGCC | 1 cut(s) | 2776 |
| Ksp22I | TGATCA | 2 cut(s) | 478, 3753 |
| LguI | GCTCTTC | 2 cut(s) | 2047, 2952 |
| LmnI | GCTCC | 3 cut(s) | 1414, 2159, 2245 |
| Lsp1109I | GCAGC | 4 cut(s) | 365, 1535, 3092, 3448 |
| LweI | GCATC | 6 cut(s) | 40, 283, 903, 2053, 2830, 2932 |
| MabI | ACCWGGT | 1 cut(s) | 1359 |
| MaeI | CTAG | 4 cut(s) | 666, 2196, 2414, 2703 |
| MaeII | ACGT | 8 cut(s) | 124, 674, 826, 846, 2001, 2602, 3035, 3561 |
| MaeIII | GTNAC | 7 cut(s) | 577, 646, 1453, 1994, 2123, 2462, 3100 |
| MfeI | CAATTG | 2 cut(s) | 891, 1518 |
| MhlI | GDGCHC | 2 cut(s) | 1767, 2803 |
| Mly113I | GGCGCC | 1 cut(s) | 2777 |
| MlyI | GAGTC | 6 cut(s) | 338, 1520, 2489, 2551, 3420, 3479 |
| MmeI | TCCRAC | 4 cut(s) | 129, 1170, 1325, 3703 |
| Mph1103I | ATGCAT | 1 cut(s) | 2400 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2862, 3302 |
| MslI | CAYNNNNRTG | 5 cut(s) | 267, 1169, 2445, 3200, 3676 |
| MspA1I | CMGCKG | 1 cut(s) | 3461 |
| MspCI | CTTAAG | 2 cut(s) | 2024, 2632 |
| MunI | CAATTG | 2 cut(s) | 891, 1518 |
| Mva1269I | GAATGC | 2 cut(s) | 341, 3530 |
| MvaI | CCWGG | 5 cut(s) | 1361, 2157, 2952, 3396, 3419 |
| MvnI | CGCG | 2 cut(s) | 1021, 1399 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 384, 913, 1853, 2785 |
| NarI | GGCGCC | 1 cut(s) | 2777 |
| NciI | CCSGG | 5 cut(s) | 2217, 2218, 2547, 2548, 3540 |
| NdeI | CATATG | 1 cut(s) | 3750 |
| NlaIV | GGNNCC | 6 cut(s) | 279, 2097, 2112, 2778, 3497, 3669 |
| NmeAIII | GCCGAG | 1 cut(s) | 2411 |
| NmuCI | GTSAC | 2 cut(s) | 1994, 3100 |
| NsbI | TGCGCA | 1 cut(s) | 3439 |
| NsiI | ATGCAT | 1 cut(s) | 2400 |
| NspI | RCATGY | 3 cut(s) | 2042, 2402, 2438 |
| NspV | TTCGAA | 2 cut(s) | 1740, 3387 |
| OliI | CACNNNNGTG | 1 cut(s) | 1169 |
| PaeI | GCATGC | 1 cut(s) | 2438 |
| PaeR7I | CTCGAG | 2 cut(s) | 1053, 2789 |
| PagI | TCATGA | 3 cut(s) | 325, 2719, 3756 |
| PaqCI | CACCTGC | 1 cut(s) | 1457 |
| PceI | AGGCCT | 1 cut(s) | 2609 |
| PciI | ACATGT | 1 cut(s) | 2038 |
| PciSI | GCTCTTC | 2 cut(s) | 2047, 2952 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 680, 1387, 1710, 1737 |
| PctI | GAATGC | 2 cut(s) | 341, 3530 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2862, 3302 |
| PfeI | GAWTC | 6 cut(s) | 402, 413, 498, 758, 1424, 1964 |
| PinAI | ACCGGT | 2 cut(s) | 280, 3341 |
| PkrI | GCNGC | 6 cut(s) | 199, 380, 1525, 1984, 3082, 3463 |
| PleI | GAGTC | 6 cut(s) | 337, 1519, 2489, 2550, 3419, 3479 |
| PluTI | GGCGCC | 1 cut(s) | 2780 |
| PpsI | GAGTC | 6 cut(s) | 337, 1519, 2489, 2550, 3419, 3479 |
| Ppu21I | YACGTR | 2 cut(s) | 827, 2603 |
| PpuMI | RGGWCCY | 1 cut(s) | 1352 |
| PscI | ACATGT | 1 cut(s) | 2038 |
| PshBI | ATTAAT | 1 cut(s) | 2012 |
| Psp124BI | GAGCTC | 1 cut(s) | 2803 |
| Psp1406I | AACGTT | 1 cut(s) | 2001 |
| Psp5II | RGGWCCY | 1 cut(s) | 1352 |
| Psp6I | CCWGG | 5 cut(s) | 1359, 2155, 2950, 3394, 3417 |
| PspGI | CCWGG | 5 cut(s) | 1359, 2155, 2950, 3394, 3417 |
| PspN4I | GGNNCC | 6 cut(s) | 279, 2097, 2112, 2778, 3497, 3669 |
| PspPI | GGNCC | 3 cut(s) | 831, 1352, 1872 |
| PspPPI | RGGWCCY | 1 cut(s) | 1352 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 664, 696, 2258, 2290, 2317, 2349 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2090 |
| RseI | CAYNNNNRTG | 5 cut(s) | 267, 1169, 2445, 3200, 3676 |
| SacI | GAGCTC | 1 cut(s) | 2803 |
| SapI | GCTCTTC | 2 cut(s) | 2047, 2952 |
| SatI | GCNGC | 6 cut(s) | 198, 379, 1524, 1983, 3081, 3462 |
| Sau96I | GGNCC | 3 cut(s) | 831, 1352, 1872 |
| ScaI | AGTACT | 3 cut(s) | 475, 1253, 2681 |
| SchI | GAGTC | 6 cut(s) | 338, 1520, 2489, 2551, 3420, 3479 |
| SduI | GDGCHC | 2 cut(s) | 1767, 2803 |
| SexAI | ACCWGGT | 1 cut(s) | 1359 |
| SfaNI | GCATC | 6 cut(s) | 40, 283, 903, 2053, 2830, 2932 |
| SfcI | CTRYAG | 4 cut(s) | 309, 487, 2957, 3519 |
| SfoI | GGCGCC | 1 cut(s) | 2778 |
| Sfr274I | CTCGAG | 2 cut(s) | 1053, 2789 |
| SfuI | TTCGAA | 2 cut(s) | 1740, 3387 |
| SinI | GGWCC | 3 cut(s) | 831, 1352, 1872 |
| SlaI | CTCGAG | 2 cut(s) | 1053, 2789 |
| SmaI | CCCGGG | 2 cut(s) | 2218, 2548 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 267, 1169, 2445, 3200, 3676 |
| SnaBI | TACGTA | 2 cut(s) | 827, 2603 |
| SphI | GCATGC | 1 cut(s) | 2438 |
| SseBI | AGGCCT | 1 cut(s) | 2609 |
| SsiI | CCGC | 7 cut(s) | 197, 907, 1399, 1982, 3137, 3459, 3665 |
| SspDI | GGCGCC | 1 cut(s) | 2776 |
| SspI | AATATT | 1 cut(s) | 691 |
| SspMI | CTAG | 4 cut(s) | 666, 2196, 2414, 2703 |
| SstI | GAGCTC | 1 cut(s) | 2803 |
| StuI | AGGCCT | 1 cut(s) | 2609 |
| StyI | CCWWGG | 2 cut(s) | 373, 1527 |
| TaiI | ACGT | 8 cut(s) | 127, 677, 829, 849, 2004, 2605, 3038, 3564 |
| TaqII | GACCGA | 1 cut(s) | 416 |
| TatI | WGTACW | 6 cut(s) | 473, 1111, 1251, 2256, 2679, 3603 |
| TauI | GCSGC | 2 cut(s) | 200, 1985 |
| TfiI | GAWTC | 6 cut(s) | 402, 413, 498, 758, 1424, 1964 |
| TscAI | CASTG | 4 cut(s) | 624, 1549, 1562, 3655 |
| TseFI | GTSAC | 2 cut(s) | 1994, 3100 |
| TseI | GCWGC | 4 cut(s) | 378, 1523, 3080, 3461 |
| Tsp45I | GTSAC | 2 cut(s) | 1994, 3100 |
| TspGWI | ACGGA | 6 cut(s) | 149, 406, 1325, 3002, 3081, 3263 |
| TspMI | CCCGGG | 2 cut(s) | 2216, 2546 |
| TspRI | CASTG | 4 cut(s) | 624, 1549, 1562, 3655 |
| Vha464I | CTTAAG | 2 cut(s) | 2024, 2632 |
| VpaK11BI | GGWCC | 3 cut(s) | 831, 1352, 1872 |
| VspI | ATTAAT | 1 cut(s) | 2012 |
| XapI | RAATTY | 5 cut(s) | 360, 1579, 2747, 3125, 3383 |
| XceI | RCATGY | 3 cut(s) | 2042, 2402, 2438 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 380 |
| XhoI | CTCGAG | 2 cut(s) | 1053, 2789 |
| XmaI | CCCGGG | 2 cut(s) | 2216, 2546 |
| XmiI | GTMKAC | 1 cut(s) | 2956 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2862, 3302 |
| XspI | CTAG | 4 cut(s) | 666, 2196, 2414, 2703 |
| ZrmI | AGTACT | 3 cut(s) | 475, 1253, 2681 |
| Zsp2I | ATGCAT | 1 cut(s) | 2400 |