DNA repair and recombination protein RAD54-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G42670 AT3G42670 AT3G42670 AT3G42670 AT5G20420 |
| fragaria_vesca | FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 |
| prunus_persica | Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 |
| pyrus_communis | pycom07g20580 |
| rosa_chinensis | RchiOBHm_Chr1g0371111 |
| rosa_laevigata | RLG00000026985 |
| rosa_multiflora | Rmu_sc0003714.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00285980 |
| rosa_rugosa | Rorug01G0361300 Rorug01G0361300 Rorug01G0361400 Rorug01G0361500 Rorug01G0361500 |
| rosa_samantha | Rh1AG371800 Rh1BG335000 Rh1CG348400 Rh1DG366300 |
| rosa_wichuraiana | Rw1G032690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1226 |
| Acc36I | ACCTGC | 1 cut(s) | 1226 |
| Acc65I | GGTACC | 1 cut(s) | 454 |
| AccB1I | GGYRCC | 1 cut(s) | 454 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2554 |
| AccI | GTMKAC | 3 cut(s) | 1202, 2225, 2716 |
| AciI | CCGC | 1 cut(s) | 559 |
| AcuI | CTGAAG | 4 cut(s) | 162, 1470, 1988, 3222 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1145, 1816, 1925, 2062, 2355, 2554 |
| AflII | CTTAAG | 1 cut(s) | 1556 |
| AflIII | ACRYGT | 1 cut(s) | 1597 |
| AgeI | ACCGGT | 1 cut(s) | 2062 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1994 |
| AjnI | CCWGG | 8 cut(s) | 1513, 1918, 1978, 2024, 2305, 2970, 3154, 3298 |
| AleI | CACNNNNGTG | 1 cut(s) | 1719 |
| Alw26I | GTCTC | 2 cut(s) | 2645, 3028 |
| Ama87I | CYCGRG | 1 cut(s) | 2562 |
| AoxI | GGCC | 5 cut(s) | 631, 647, 2131, 2465, 3296 |
| ApeKI | GCWGC | 4 cut(s) | 1481, 2870, 3073, 3221 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1495, 1527, 2246, 2278 |
| AsiGI | ACCGGT | 1 cut(s) | 2062 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 28, 1325, 1973, 2429 |
| Asp718I | GGTACC | 1 cut(s) | 454 |
| AspS9I | GGNCC | 8 cut(s) | 101, 632, 977, 1224, 1312, 1511, 2132, 2500 |
| AsuC2I | CCSGG | 3 cut(s) | 452, 2712, 3103 |
| AsuHPI | GGTGA | 4 cut(s) | 509, 1472, 2824, 3497 |
| AsuII | TTCGAA | 1 cut(s) | 640 |
| AvaI | CYCGRG | 1 cut(s) | 2562 |
| AvaII | GGWCC | 6 cut(s) | 101, 977, 1224, 1312, 1511, 2500 |
| AxyI | CCTNAGG | 1 cut(s) | 2294 |
| BaeGI | GKGCMC | 1 cut(s) | 2334 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2174, 2207 |
| BamHI | GGATCC | 2 cut(s) | 447, 3427 |
| BanI | GGYRCC | 1 cut(s) | 454 |
| BanII | GRGCYC | 1 cut(s) | 2313 |
| BauI | CACGAG | 1 cut(s) | 3285 |
| BbsI | GAAGAC | 6 cut(s) | 157, 1092, 1589, 2259, 3363, 3495 |
| BbvI | GCAGC | 4 cut(s) | 1468, 2882, 3085, 3208 |
| BccI | CCATC | 7 cut(s) | 403, 538, 743, 1106, 1864, 2548, 2902 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1010, 1044 |
| BciT130I | CCWGG | 8 cut(s) | 1515, 1920, 1980, 2026, 2307, 2972, 3156, 3300 |
| BciVI | GTATCC | 2 cut(s) | 2817, 3403 |
| BclI | TGATCA | 6 cut(s) | 157, 901, 937, 1941, 2829, 3513 |
| BcnI | CCSGG | 3 cut(s) | 452, 2712, 3103 |
| BcoDI | GTCTC | 2 cut(s) | 2645, 3028 |
| BfaI | CTAG | 8 cut(s) | 21, 2174, 2205, 2315, 2321, 2819, 3044, 3228 |
| BfmI | CTRYAG | 4 cut(s) | 2092, 2717, 2868, 3279 |
| BfrI | CTTAAG | 1 cut(s) | 1556 |
| BfuAI | ACCTGC | 1 cut(s) | 1226 |
| BfuI | GTATCC | 2 cut(s) | 2817, 3403 |
| BisI | GCNGC | 5 cut(s) | 560, 1482, 2871, 3074, 3222 |
| BlsI | GCNGC | 5 cut(s) | 561, 1483, 2872, 3075, 3223 |
| BmcAI | AGTACT | 2 cut(s) | 209, 1039 |
| Bme18I | GGWCC | 6 cut(s) | 101, 977, 1224, 1312, 1511, 2500 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1994 |
| BmeT110I | CYCGRG | 1 cut(s) | 2562 |
| BmgT120I | GGNCC | 8 cut(s) | 101, 632, 977, 1224, 1312, 1511, 2132, 2500 |
| BmrI | ACTGGG | 1 cut(s) | 795 |
| BmsI | GCATC | 9 cut(s) | 7, 475, 598, 1130, 1451, 2145, 2235, 3191, 3233 |
| BmuI | ACTGGG | 1 cut(s) | 795 |
| BpiI | GAAGAC | 6 cut(s) | 157, 1092, 1589, 2259, 3363, 3495 |
| BpmI | CTGGAG | 4 cut(s) | 1111, 1227, 1941, 3131 |
| Bpu14I | TTCGAA | 1 cut(s) | 640 |
| BpuEI | CTTGAG | 2 cut(s) | 2271, 2936 |
| BpuMI | CCSGG | 3 cut(s) | 452, 2712, 3103 |
| BsaI | GGTCTC | 1 cut(s) | 2645 |
| BsaJI | CCNNGG | 8 cut(s) | 97, 949, 1978, 2306, 2811, 2836, 2852, 3102 |
| BsaWI | WCCGGW | 1 cut(s) | 2062 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1382, 1397, 1412, 1427 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1145, 1816, 1925, 2062, 2355, 2554 |
| Bse118I | RCCGGY | 1 cut(s) | 2062 |
| Bse1I | ACTGG | 5 cut(s) | 70, 801, 1128, 1210, 1315 |
| Bse21I | CCTNAGG | 1 cut(s) | 2294 |
| Bse3DI | GCAATG | 2 cut(s) | 1944, 3021 |
| BseBI | CCWGG | 8 cut(s) | 1515, 1920, 1980, 2026, 2307, 2972, 3156, 3300 |
| BseDI | CCNNGG | 8 cut(s) | 97, 949, 1978, 2306, 2811, 2836, 2852, 3102 |
| BseGI | GGATG | 8 cut(s) | 754, 855, 1099, 1117, 1121, 1168, 1741, 2848 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1145, 1816, 1925, 2062, 2355, 2554 |
| BseMI | GCAATG | 2 cut(s) | 1944, 3021 |
| BseMII | CTCAG | 7 cut(s) | 534, 609, 747, 1392, 2285, 2642, 3438 |
| BseNI | ACTGG | 5 cut(s) | 70, 801, 1128, 1210, 1315 |
| BseRI | GAGGAG | 5 cut(s) | 1397, 1400, 1403, 1418, 1712 |
| BseSI | GKGCMC | 1 cut(s) | 2334 |
| BseXI | GCAGC | 4 cut(s) | 1468, 2882, 3085, 3208 |
| BseYI | CCCAGC | 1 cut(s) | 1925 |
| BsgI | GTGCAG | 1 cut(s) | 365 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2083 |
| BshFI | GGCC | 5 cut(s) | 633, 649, 2133, 2467, 3298 |
| BshNI | GGYRCC | 1 cut(s) | 454 |
| BshTI | ACCGGT | 1 cut(s) | 2062 |
| BsiEI | CGRYCG | 1 cut(s) | 2083 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2562 |
| BsiSI | CCGG | 4 cut(s) | 452, 2063, 2712, 3102 |
| BslFI | GGGAC | 1 cut(s) | 2880 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1145, 1816, 1925, 2062, 2355, 2554 |
| BsmAI | GTCTC | 2 cut(s) | 2645, 3028 |
| BsmFI | GGGAC | 1 cut(s) | 2880 |
| BsmI | GAATGC | 2 cut(s) | 830, 3503 |
| BsnI | GGCC | 5 cut(s) | 633, 649, 2133, 2467, 3298 |
| Bso31I | GGTCTC | 1 cut(s) | 2645 |
| BsoBI | CYCGRG | 1 cut(s) | 2562 |
| Bsp119I | TTCGAA | 1 cut(s) | 640 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2313, 2334 |
| BspACI | CCGC | 1 cut(s) | 559 |
| BspANI | GGCC | 5 cut(s) | 633, 649, 2133, 2467, 3298 |
| BspCNI | CTCAG | 7 cut(s) | 535, 610, 748, 1393, 2286, 2643, 3439 |
| BspHI | TCATGA | 2 cut(s) | 49, 3516 |
| BspMAI | CTGCAG | 1 cut(s) | 2872 |
| BspMI | ACCTGC | 1 cut(s) | 1226 |
| BspT104I | TTCGAA | 1 cut(s) | 640 |
| BspT107I | GGYRCC | 1 cut(s) | 454 |
| BspTI | CTTAAG | 1 cut(s) | 1556 |
| BspTNI | GGTCTC | 1 cut(s) | 2645 |
| BsrDI | GCAATG | 2 cut(s) | 1944, 3021 |
| BsrFI | RCCGGY | 1 cut(s) | 2062 |
| BsrI | ACTGG | 5 cut(s) | 70, 801, 1128, 1210, 1315 |
| BssAI | RCCGGY | 1 cut(s) | 2062 |
| BssECI | CCNNGG | 8 cut(s) | 97, 949, 1978, 2306, 2811, 2836, 2852, 3102 |
| BssNAI | GTATAC | 2 cut(s) | 1203, 2226 |
| BssSI | CACGAG | 1 cut(s) | 3285 |
| BssT1I | CCWWGG | 5 cut(s) | 97, 949, 2811, 2836, 2852 |
| Bst1107I | GTATAC | 2 cut(s) | 1203, 2226 |
| Bst2BI | CACGAG | 1 cut(s) | 3285 |
| Bst2UI | CCWGG | 8 cut(s) | 1515, 1920, 1980, 2026, 2307, 2972, 3156, 3300 |
| Bst4CI | ACNGT | 7 cut(s) | 215, 705, 1001, 1800, 2081, 2981, 3039 |
| Bst6I | CTCTTC | 2 cut(s) | 738, 1138 |
| BstAFI | CTTAAG | 1 cut(s) | 1556 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 608, 2876 |
| BstBI | TTCGAA | 1 cut(s) | 640 |
| BstDEI | CTNAG | 9 cut(s) | 543, 618, 756, 780, 1401, 1787, 2294, 2651, 3447 |
| BstF5I | GGATG | 8 cut(s) | 754, 855, 1099, 1117, 1121, 1168, 1741, 2848 |
| BstMAI | GTCTC | 2 cut(s) | 2645, 3028 |
| BstMCI | CGRYCG | 1 cut(s) | 2083 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 568, 608, 834, 2876, 3304 |
| BstNI | CCWGG | 8 cut(s) | 1515, 1920, 1980, 2026, 2307, 2972, 3156, 3300 |
| BstNSI | RCATGY | 5 cut(s) | 517, 606, 1601, 2162, 2198 |
| BstSFI | CTRYAG | 4 cut(s) | 2092, 2717, 2868, 3279 |
| BstSLI | GKGCMC | 1 cut(s) | 2334 |
| BstV1I | GCAGC | 4 cut(s) | 1468, 2882, 3085, 3208 |
| BstV2I | GAAGAC | 6 cut(s) | 157, 1092, 1589, 2259, 3363, 3495 |
| BstX2I | RGATCY | 7 cut(s) | 447, 1663, 1675, 1850, 2052, 3106, 3427 |
| BstYI | RGATCY | 7 cut(s) | 447, 1663, 1675, 1850, 2052, 3106, 3427 |
| BstZ17I | GTATAC | 2 cut(s) | 1203, 2226 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2294 |
| BsuI | GTATCC | 2 cut(s) | 2817, 3403 |
| BsuRI | GGCC | 5 cut(s) | 633, 649, 2133, 2467, 3298 |
| BtsCI | GGATG | 8 cut(s) | 754, 855, 1099, 1117, 1121, 1168, 1741, 2848 |
| BtsI | GCAGTG | 1 cut(s) | 3189 |
| BtsIMutI | CAGTG | 9 cut(s) | 348, 701, 808, 1006, 1322, 2745, 3074, 3189, 3415 |
| BveI | ACCTGC | 1 cut(s) | 1226 |
| CciI | TCATGA | 2 cut(s) | 49, 3516 |
| Cfr10I | RCCGGY | 1 cut(s) | 2062 |
| Cfr13I | GGNCC | 8 cut(s) | 101, 632, 977, 1224, 1312, 1511, 2132, 2500 |
| CseI | GACGC | 2 cut(s) | 560, 912 |
| CsiI | ACCWGGT | 3 cut(s) | 2024, 2970, 3154 |
| CspAI | ACCGGT | 1 cut(s) | 2062 |
| DdeI | CTNAG | 9 cut(s) | 543, 618, 756, 780, 1401, 1787, 2294, 2651, 3447 |
| DraI | TTTAAA | 1 cut(s) | 418 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1994 |
| Eam1104I | CTCTTC | 2 cut(s) | 738, 1138 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1994 |
| EarI | CTCTTC | 2 cut(s) | 738, 1138 |
| Eco130I | CCWWGG | 5 cut(s) | 97, 949, 2811, 2836, 2852 |
| Eco147I | AGGCCT | 1 cut(s) | 3298 |
| Eco24I | GRGCYC | 1 cut(s) | 2313 |
| Eco31I | GGTCTC | 1 cut(s) | 2645 |
| Eco47I | GGWCC | 6 cut(s) | 101, 977, 1224, 1312, 1511, 2500 |
| Eco57I | CTGAAG | 4 cut(s) | 162, 1470, 1988, 3222 |
| Eco81I | CCTNAGG | 1 cut(s) | 2294 |
| Eco88I | CYCGRG | 1 cut(s) | 2562 |
| EcoO109I | RGGNCCY | 3 cut(s) | 101, 632, 1224 |
| EcoRI | GAATTC | 2 cut(s) | 190, 2036 |
| EcoRII | CCWGG | 8 cut(s) | 1513, 1918, 1978, 2024, 2305, 2970, 3154, 3298 |
| EcoT14I | CCWWGG | 5 cut(s) | 97, 949, 2811, 2836, 2852 |
| EcoT22I | ATGCAT | 2 cut(s) | 519, 2160 |
| EcoT38I | GRGCYC | 1 cut(s) | 2313 |
| ErhI | CCWWGG | 5 cut(s) | 97, 949, 2811, 2836, 2852 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 90, 122, 721, 753, 1211, 1243, 2564, 2596 |
| FaqI | GGGAC | 1 cut(s) | 2880 |
| FauNDI | CATATG | 2 cut(s) | 1627, 3510 |
| FbaI | TGATCA | 6 cut(s) | 157, 901, 937, 1941, 2829, 3513 |
| FblI | GTMKAC | 3 cut(s) | 1202, 2225, 2716 |
| Fnu4HI | GCNGC | 5 cut(s) | 560, 1482, 2871, 3074, 3222 |
| FokI | GGATG | 8 cut(s) | 761, 862, 1106, 1108, 1124, 1155, 1748, 2835 |
| FriOI | GRGCYC | 1 cut(s) | 2313 |
| Fsp4HI | GCNGC | 5 cut(s) | 560, 1482, 2871, 3074, 3222 |
| FspBI | CTAG | 8 cut(s) | 21, 2174, 2205, 2315, 2321, 2819, 3044, 3228 |
| GluI | GCNGC | 5 cut(s) | 560, 1482, 2871, 3074, 3222 |
| GsaI | CCCAGC | 1 cut(s) | 1929 |
| GsuI | CTGGAG | 4 cut(s) | 1111, 1227, 1941, 3131 |
| HaeIII | GGCC | 5 cut(s) | 633, 649, 2133, 2467, 3298 |
| HapII | CCGG | 4 cut(s) | 452, 2063, 2712, 3102 |
| HgaI | GACGC | 2 cut(s) | 560, 912 |
| HincII | GTYRAC | 2 cut(s) | 82, 94 |
| HindII | GTYRAC | 2 cut(s) | 82, 94 |
| HinfI | GANTC | 7 cut(s) | 53, 677, 1469, 2255, 2606, 3245, 3256 |
| HpaI | GTTAAC | 1 cut(s) | 94 |
| HpaII | CCGG | 4 cut(s) | 452, 2063, 2712, 3102 |
| HphI | GGTGA | 4 cut(s) | 509, 1472, 2824, 3497 |
| Hpy166II | GTNNAC | 9 cut(s) | 82, 94, 232, 1203, 1635, 2226, 2269, 2717, 2977 |
| Hpy8I | GTNNAC | 9 cut(s) | 82, 94, 232, 1203, 1635, 2226, 2269, 2717, 2977 |
| Hpy99I | CGWCG | 1 cut(s) | 576 |
| HpyCH4III | ACNGT | 7 cut(s) | 215, 705, 1001, 1800, 2081, 2981, 3039 |
| HpyCH4IV | ACGT | 2 cut(s) | 1720, 3124 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 568, 608, 834, 2876, 3304 |
| HpyF3I | CTNAG | 9 cut(s) | 543, 618, 756, 780, 1401, 1787, 2294, 2651, 3447 |
| HpySE526I | ACGT | 2 cut(s) | 1720, 3124 |
| KpnI | GGTACC | 1 cut(s) | 458 |
| Ksp22I | TGATCA | 6 cut(s) | 157, 901, 937, 1941, 2829, 3513 |
| KspAI | GTTAAC | 1 cut(s) | 94 |
| LmnI | GCTCC | 9 cut(s) | 43, 616, 1208, 1249, 1922, 2008, 2316, 2911, 3161 |
| Lsp1109I | GCAGC | 4 cut(s) | 1468, 2882, 3085, 3208 |
| LweI | GCATC | 9 cut(s) | 7, 475, 598, 1130, 1451, 2145, 2235, 3191, 3233 |
| MabI | ACCWGGT | 3 cut(s) | 2024, 2970, 3154 |
| MaeI | CTAG | 8 cut(s) | 21, 2174, 2205, 2315, 2321, 2819, 3044, 3228 |
| MaeII | ACGT | 2 cut(s) | 1720, 3124 |
| MaeIII | GTNAC | 6 cut(s) | 301, 509, 803, 1600, 2116, 2983 |
| MflI | RGATCY | 7 cut(s) | 447, 1663, 1675, 1850, 2052, 3106, 3427 |
| MhlI | GDGCHC | 2 cut(s) | 2313, 2334 |
| MlyI | GAGTC | 3 cut(s) | 47, 2249, 3239 |
| MmeI | TCCRAC | 2 cut(s) | 306, 3222 |
| Mph1103I | ATGCAT | 2 cut(s) | 519, 2160 |
| MroXI | GAANNNNTTC | 4 cut(s) | 28, 1325, 1973, 2429 |
| MseI | TTAA | 8 cut(s) | 93, 129, 417, 843, 1229, 1557, 1775, 2043 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1719 |
| MspA1I | CMGCKG | 1 cut(s) | 3221 |
| MspCI | CTTAAG | 1 cut(s) | 1556 |
| MspI | CCGG | 4 cut(s) | 452, 2063, 2712, 3102 |
| Mva1269I | GAATGC | 2 cut(s) | 830, 3503 |
| MvaI | CCWGG | 8 cut(s) | 1515, 1920, 1980, 2026, 2307, 2972, 3156, 3300 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 568, 608, 834, 2876, 3304 |
| NciI | CCSGG | 3 cut(s) | 452, 2712, 3103 |
| NdeI | CATATG | 2 cut(s) | 1627, 3510 |
| NmuCI | GTSAC | 2 cut(s) | 509, 803 |
| NsiI | ATGCAT | 2 cut(s) | 519, 2160 |
| NspI | RCATGY | 5 cut(s) | 517, 606, 1601, 2162, 2198 |
| NspV | TTCGAA | 1 cut(s) | 640 |
| OliI | CACNNNNGTG | 1 cut(s) | 1719 |
| PaeI | GCATGC | 1 cut(s) | 2198 |
| PaeR7I | CTCGAG | 1 cut(s) | 2562 |
| PagI | TCATGA | 2 cut(s) | 49, 3516 |
| PaqCI | CACCTGC | 1 cut(s) | 1226 |
| PceI | AGGCCT | 1 cut(s) | 3298 |
| PciI | ACATGT | 1 cut(s) | 1597 |
| PctI | GAATGC | 2 cut(s) | 830, 3503 |
| PdmI | GAANNNNTTC | 4 cut(s) | 28, 1325, 1973, 2429 |
| PfeI | GAWTC | 4 cut(s) | 677, 1469, 2606, 3256 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2554 |
| PfoI | TCCNGGA | 1 cut(s) | 1918 |
| PinAI | ACCGGT | 1 cut(s) | 2062 |
| PkrI | GCNGC | 5 cut(s) | 561, 1483, 2872, 3075, 3223 |
| PleI | GAGTC | 3 cut(s) | 47, 2249, 3239 |
| PpsI | GAGTC | 3 cut(s) | 47, 2249, 3239 |
| PpuMI | RGGWCCY | 2 cut(s) | 101, 1224 |
| PscI | ACATGT | 1 cut(s) | 1597 |
| Psp5II | RGGWCCY | 2 cut(s) | 101, 1224 |
| Psp6I | CCWGG | 8 cut(s) | 1513, 1918, 1978, 2024, 2305, 2970, 3154, 3298 |
| PspFI | CCCAGC | 1 cut(s) | 1925 |
| PspGI | CCWGG | 8 cut(s) | 1513, 1918, 1978, 2024, 2305, 2970, 3154, 3298 |
| PspPI | GGNCC | 8 cut(s) | 101, 632, 977, 1224, 1312, 1511, 2132, 2500 |
| PspPPI | RGGWCCY | 2 cut(s) | 101, 1224 |
| PspXI | VCTCGAGB | 1 cut(s) | 2562 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2960, 2992 |
| PstI | CTGCAG | 1 cut(s) | 2872 |
| PsuI | RGATCY | 7 cut(s) | 447, 1663, 1675, 1850, 2052, 3106, 3427 |
| PvuII | CAGCTG | 1 cut(s) | 3221 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1719 |
| SaqAI | TTAA | 8 cut(s) | 93, 129, 417, 843, 1229, 1557, 1775, 2043 |
| SatI | GCNGC | 5 cut(s) | 560, 1482, 2871, 3074, 3222 |
| Sau96I | GGNCC | 8 cut(s) | 101, 632, 977, 1224, 1312, 1511, 2132, 2500 |
| ScaI | AGTACT | 2 cut(s) | 209, 1039 |
| SchI | GAGTC | 3 cut(s) | 47, 2249, 3239 |
| SduI | GDGCHC | 2 cut(s) | 2313, 2334 |
| SexAI | ACCWGGT | 3 cut(s) | 2024, 2970, 3154 |
| SfaNI | GCATC | 9 cut(s) | 7, 475, 598, 1130, 1451, 2145, 2235, 3191, 3233 |
| SfcI | CTRYAG | 4 cut(s) | 2092, 2717, 2868, 3279 |
| Sfr274I | CTCGAG | 1 cut(s) | 2562 |
| SfuI | TTCGAA | 1 cut(s) | 640 |
| SinI | GGWCC | 6 cut(s) | 101, 977, 1224, 1312, 1511, 2500 |
| SlaI | CTCGAG | 1 cut(s) | 2562 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1719 |
| SmlI | CTYRAG | 4 cut(s) | 1556, 2286, 2562, 2915 |
| SmoI | CTYRAG | 4 cut(s) | 1556, 2286, 2562, 2915 |
| SphI | GCATGC | 1 cut(s) | 2198 |
| SseBI | AGGCCT | 1 cut(s) | 3298 |
| SsiI | CCGC | 1 cut(s) | 559 |
| SspI | AATATT | 2 cut(s) | 1843, 2400 |
| SspMI | CTAG | 8 cut(s) | 21, 2174, 2205, 2315, 2321, 2819, 3044, 3228 |
| StuI | AGGCCT | 1 cut(s) | 3298 |
| StyI | CCWWGG | 5 cut(s) | 97, 949, 2811, 2836, 2852 |
| TaaI | ACNGT | 7 cut(s) | 215, 705, 1001, 1800, 2081, 2981, 3039 |
| TaiI | ACGT | 2 cut(s) | 1723, 3127 |
| TatI | WGTACW | 3 cut(s) | 207, 1037, 2796 |
| TauI | GCSGC | 1 cut(s) | 562 |
| TfiI | GAWTC | 4 cut(s) | 677, 1469, 2606, 3256 |
| Tru1I | TTAA | 8 cut(s) | 93, 129, 417, 843, 1229, 1557, 1775, 2043 |
| Tru9I | TTAA | 8 cut(s) | 93, 129, 417, 843, 1229, 1557, 1775, 2043 |
| TscAI | CASTG | 9 cut(s) | 348, 708, 808, 1006, 1322, 2752, 3074, 3196, 3415 |
| TseFI | GTSAC | 2 cut(s) | 509, 803 |
| TseI | GCWGC | 4 cut(s) | 1481, 2870, 3073, 3221 |
| Tsp45I | GTSAC | 2 cut(s) | 509, 803 |
| TspGWI | ACGGA | 1 cut(s) | 1208 |
| TspRI | CASTG | 9 cut(s) | 348, 708, 808, 1006, 1322, 2752, 3074, 3196, 3415 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2554 |
| Vha464I | CTTAAG | 1 cut(s) | 1556 |
| VpaK11BI | GGWCC | 6 cut(s) | 101, 977, 1224, 1312, 1511, 2500 |
| XbaI | TCTAGA | 2 cut(s) | 2320, 3043 |
| XceI | RCATGY | 5 cut(s) | 517, 606, 1601, 2162, 2198 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 104 |
| XhoI | CTCGAG | 1 cut(s) | 2562 |
| XmiI | GTMKAC | 3 cut(s) | 1202, 2225, 2716 |
| XmnI | GAANNNNTTC | 4 cut(s) | 28, 1325, 1973, 2429 |
| XspI | CTAG | 8 cut(s) | 21, 2174, 2205, 2315, 2321, 2819, 3044, 3228 |
| ZrmI | AGTACT | 2 cut(s) | 209, 1039 |
| Zsp2I | ATGCAT | 2 cut(s) | 519, 2160 |