AT5G22620

Phosphoglycerate bisphosphoglycerate mutase family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
7516949 .. 7520281
3333 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G22620.3

Sequence Viewer

Length: 1449 bp
ATGATTTCTCTACCACTCACTACACCGATTTTACCCAGCCGGTGTCTTCTCCACAAAACCCGCCGGCAAAACTCGACTCGCCGCCGCTTATTGATTCGATCATCATCGAGCTTACAAGACCAATTCACCGTGGAGACGACGAAGCGAGTGGTTCTTGTGAGACATGGACAGAGCACGTGGAACGAAGAAGGGAGGATTCAAGGAAGCTCCGATTTCTCCGTTTTGACGAAGAAAGGCGAGTCTCAGGCTGAAATTTCTCGTCAGATGCTTATCGACGACTCCTTCGATGTCTGCTTCACCAGTCCATTGAAGAGATCAAAGAAAACAGCTGAAATCATATGGGGAAGTAGAGAAAGTGAGATGATTTTCGATTACGATCTCAGAGAAATCGATCTCTACTCTTTTCAAGGTCTACTTAAGAAAGAAGGGAAAGAGAAGTTTGGGGAAGCTTTTAAGCAATGGCAAGAAGATCCGGCGAACTTTATCATCGATGGTCATTATCCCGTAAGAGAGTTATGGTCACGTGCTAGAAGCTGTTGGCCTGGTATTCTTGCTCATGAGAGCAAGTCTGTTCTCGTTGTTGCTCATAATGCTGTTAATCAGGCTCTTCTGGCAACAGCAATTGGACTGGGAACAGAATATTTTAGGAGTTTGTTGCAGAGCAATTGTGGTGTAAGTGTATTGGACTTCATACCAAGAGCTGACGGTGGATCTCCTCACGTATGTCTTAATCGACTAAATCAGACACCTAATTCGCCTCTAGCTGGTGGAAGTTCTGGTGGCCGGAAAGCTAGTAAGCAGATTATACTTGTCTGCCATGGTCAGGGGAATAATGAGGATTCTGCTGTTATTAACCAAGCAGCTAATAATGATCAGGCAATGAACATGCTTGGTGTGATACATTCACAGAAAACCGCAGAGCTTCTACTTGATCTAAGGGTTAGTTCAATAGTTTGCAGCCCTAAAACAGCCTCCATTGAGTCTTCTGGAGTAATATCCCGGGTGCAAGAAGCTGCGGGTTGTTTAGGTGTAGATAATGTGCCTCACTACGTGAAAACGAAACAAATGAATGAGCTTGATGTTGAGAGTGTTCTTCGCAAATCCAATAAGGACAATGATGTGATTGCAAGTCAATTAGACGAAGAAGCGTTTTCAGCTCTGTGGAACAGATCCGAGAAAGCATGGGAATCACTCTTAGACGAACTATCGGATGAGAAGTCAAACCCTGGAGAAATCATGGTGGTGGTTGGTCCTGCAATGACTCACATTTCACTCATAGCACAATGCCTTAACCTCACTAAAGAAGCGCTCGGGTTGTTTCACCTAGACGCAGGTAGCATCAGTGTCATAGATTTCCCGGATGGTCCTAGTAGCAAAGGAGTAATCCGTTGCACAAACTACACCGCTCATCTTGGAAGATGGTCCATCCCTATCACAAAACCCGCCTGA

Protein Analysis

482

Amino Acids

53.11

Weight (kDa)

6.65

Isoelectric Point (pI)

57.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 50 - 231 5.4e-42 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1322
AccBSI CCGCTC 1 cut(s) 1406
AccI GTMKAC 1 cut(s) 412
AciI CCGC 7 cut(s) 61, 82, 85, 915, 1016, 1404, 1443
AclWI GGATC 3 cut(s) 464, 718, 1164
AcoI YGGCCR 1 cut(s) 781
AcsI RAATTY 1 cut(s) 252
AcvI CACGTG 2 cut(s) 177, 524
AdeI CACNNNGTG 1 cut(s) 1051
AfeI AGCGCT 1 cut(s) 1308
AfiI CCNNNNNNNGG 2 cut(s) 764, 823
AflII CTTAAG 1 cut(s) 416
AgsI TTSAA 4 cut(s) 200, 310, 407, 948
AjnI CCWGG 2 cut(s) 541, 1225
Alw21I GWGCWC 1 cut(s) 176
Alw26I GTCTC 3 cut(s) 128, 154, 246
AlwI GGATC 3 cut(s) 464, 718, 1164
Ama87I CYCGRG 2 cut(s) 999, 1310
Aor51HI AGCGCT 1 cut(s) 1308
AoxI GGCC 2 cut(s) 539, 781
ApeKI GCWGC 3 cut(s) 860, 957, 1013
ApoI RAATTY 1 cut(s) 252
ArsI GACNNNNNNTTYG 4 cut(s) 266, 298, 736, 768
AspLEI GCGC 1 cut(s) 1309
AspS9I GGNCC 3 cut(s) 1250, 1364, 1422
AsuC2I CCSGG 3 cut(s) 1000, 1001, 1358
AsuHPI GGTGA 3 cut(s) 118, 289, 1313
AvaI CYCGRG 2 cut(s) 999, 1310
AvaII GGWCC 3 cut(s) 1250, 1364, 1422
BbrPI CACGTG 2 cut(s) 177, 524
BbsI GAAGAC 2 cut(s) 38, 975
Bbv12I GWGCWC 1 cut(s) 176
BbvI GCAGC 3 cut(s) 872, 969, 1000
BccI CCATC 4 cut(s) 485, 1355, 1413, 1433
BciT130I CCWGG 2 cut(s) 543, 1227
BclI TGATCA 1 cut(s) 871
BcnI CCSGG 3 cut(s) 1000, 1001, 1358
BcoDI GTCTC 3 cut(s) 128, 154, 246
BfaI CTAG 5 cut(s) 528, 761, 792, 1325, 1368
BfoI RGCGCY 1 cut(s) 1310
BfrI CTTAAG 1 cut(s) 416
BfuAI ACCTGC 1 cut(s) 1322
BisI GCNGC 5 cut(s) 82, 85, 861, 958, 1014
BlsI GCNGC 5 cut(s) 83, 86, 862, 959, 1015
Bme1390I CCNGG 5 cut(s) 543, 1000, 1001, 1227, 1358
Bme18I GGWCC 3 cut(s) 1250, 1364, 1422
BmeT110I CYCGRG 2 cut(s) 999, 1310
BmgT120I GGNCC 3 cut(s) 1250, 1364, 1422
BmrFI CCNGG 5 cut(s) 543, 1000, 1001, 1227, 1358
BmrI ACTGGG 1 cut(s) 638
BmsI GCATC 2 cut(s) 255, 1347
BmuI ACTGGG 1 cut(s) 638
BpiI GAAGAC 2 cut(s) 38, 975
BpmI CTGGAG 2 cut(s) 1008, 1248
BpuMI CCSGG 3 cut(s) 1000, 1001, 1358
Bsa29I ATCGAT 2 cut(s) 390, 489
BsaAI YACGTR 4 cut(s) 177, 524, 721, 1051
BsaBI GATNNNNATC 3 cut(s) 103, 269, 375
BsaJI CCNNGG 4 cut(s) 129, 817, 999, 1225
Bsc4I CCNNNNNNNGG 2 cut(s) 764, 823
Bse118I RCCGGY 2 cut(s) 39, 63
Bse1I ACTGG 2 cut(s) 300, 633
Bse3DI GCAATG 3 cut(s) 464, 885, 1263
Bse8I GATNNNNATC 3 cut(s) 103, 269, 375
BseBI CCWGG 2 cut(s) 543, 1227
BseCI ATCGAT 2 cut(s) 390, 489
BseDI CCNNGG 4 cut(s) 129, 817, 999, 1225
BseGI GGATG 3 cut(s) 1216, 1366, 1425
BseJI GATNNNNATC 3 cut(s) 103, 269, 375
BseLI CCNNNNNNNGG 2 cut(s) 764, 823
BseMI GCAATG 3 cut(s) 464, 885, 1263
BseMII CTCAG 2 cut(s) 257, 394
BseNI ACTGG 2 cut(s) 300, 633
BseRI GAGGAG 1 cut(s) 705
BseXI GCAGC 3 cut(s) 872, 969, 1000
BseYI CCCAGC 1 cut(s) 35
BshFI GGCC 2 cut(s) 541, 783
BshVI ATCGAT 2 cut(s) 390, 489
BsiHKAI GWGCWC 1 cut(s) 176
BsiHKCI CYCGRG 2 cut(s) 999, 1310
BsiSI CCGG 6 cut(s) 40, 64, 473, 784, 1000, 1358
BslI CCNNNNNNNGG 2 cut(s) 764, 823
BsmAI GTCTC 3 cut(s) 128, 154, 246
BsmBI CGTCTC 1 cut(s) 128
BsnI GGCC 2 cut(s) 541, 783
BsoBI CYCGRG 2 cut(s) 999, 1310
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
Bsp19I CCATGG 1 cut(s) 817
BspACI CCGC 7 cut(s) 61, 82, 85, 915, 1016, 1404, 1443
BspANI GGCC 2 cut(s) 541, 783
BspCNI CTCAG 2 cut(s) 256, 393
BspDI ATCGAT 2 cut(s) 390, 489
BspHI TCATGA 1 cut(s) 556
BspMI ACCTGC 1 cut(s) 1322
BspPI GGATC 3 cut(s) 464, 718, 1164
BspQI GCTCTTC 1 cut(s) 612
BspTI CTTAAG 1 cut(s) 416
BsrBI CCGCTC 1 cut(s) 1406
BsrDI GCAATG 3 cut(s) 464, 885, 1263
BsrFI RCCGGY 2 cut(s) 39, 63
BsrI ACTGG 2 cut(s) 300, 633
BssAI RCCGGY 2 cut(s) 39, 63
BssECI CCNNGG 4 cut(s) 129, 817, 999, 1225
BssMI GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
BssT1I CCWWGG 1 cut(s) 817
Bst2UI CCWGG 2 cut(s) 543, 1227
Bst4CI ACNGT 2 cut(s) 130, 707
Bst6I CTCTTC 2 cut(s) 305, 612
BstAFI CTTAAG 1 cut(s) 416
BstBAI YACGTR 4 cut(s) 177, 524, 721, 1051
BstC8I GCNNGC 1 cut(s) 65
BstDEI CTNAG 4 cut(s) 243, 380, 935, 1195
BstDSI CCRYGG 2 cut(s) 129, 817
BstF5I GGATG 3 cut(s) 1216, 1366, 1425
BstH2I RGCGCY 1 cut(s) 1310
BstHHI GCGC 1 cut(s) 1309
BstKTI GATC 9 cut(s) 101, 317, 379, 394, 472, 713, 874, 934, 1172
BstMAI GTCTC 3 cut(s) 128, 154, 246
BstMBI GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
BstMWI GCNNNNNNNGC 3 cut(s) 590, 611, 1154
BstNI CCWGG 2 cut(s) 543, 1227
BstNSI RCATGY 1 cut(s) 889
BstSCI CCNGG 5 cut(s) 541, 998, 999, 1225, 1356
BstV1I GCAGC 3 cut(s) 872, 969, 1000
BstV2I GAAGAC 2 cut(s) 38, 975
BstX2I RGATCY 3 cut(s) 469, 710, 1169
BstYI RGATCY 3 cut(s) 469, 710, 1169
Bsu15I ATCGAT 2 cut(s) 390, 489
BsuRI GGCC 2 cut(s) 541, 783
BsuTUI ATCGAT 2 cut(s) 390, 489
BtgI CCRYGG 2 cut(s) 129, 817
BtsCI GGATG 3 cut(s) 1216, 1366, 1425
BtsIMutI CAGTG 1 cut(s) 1348
BveI ACCTGC 1 cut(s) 1322
Cac8I GCNNGC 1 cut(s) 65
CciI TCATGA 1 cut(s) 556
CfoI GCGC 1 cut(s) 1309
Cfr10I RCCGGY 2 cut(s) 39, 63
Cfr13I GGNCC 3 cut(s) 1250, 1364, 1422
Cfr9I CCCGGG 1 cut(s) 999
ClaI ATCGAT 2 cut(s) 390, 489
CseI GACGC 1 cut(s) 1337
CviAII CATG 6 cut(s) 164, 557, 818, 886, 1182, 1237
DdeI CTNAG 4 cut(s) 243, 380, 935, 1195
DpnI GATC 9 cut(s) 100, 316, 378, 393, 471, 712, 873, 933, 1171
DpnII GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
DraIII CACNNNGTG 1 cut(s) 1051
EaeI YGGCCR 1 cut(s) 781
Eam1104I CTCTTC 2 cut(s) 305, 612
EarI CTCTTC 2 cut(s) 305, 612
Eco130I CCWWGG 1 cut(s) 817
Eco47I GGWCC 3 cut(s) 1250, 1364, 1422
Eco47III AGCGCT 1 cut(s) 1308
Eco72I CACGTG 2 cut(s) 177, 524
Eco88I CYCGRG 2 cut(s) 999, 1310
EcoRII CCWGG 2 cut(s) 541, 1225
EcoT14I CCWWGG 1 cut(s) 817
ErhI CCWWGG 1 cut(s) 817
Esp3I CGTCTC 1 cut(s) 128
FaeI CATG 6 cut(s) 167, 560, 821, 889, 1185, 1240
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FatI CATG 6 cut(s) 163, 556, 817, 885, 1181, 1236
FauI CCCGC 2 cut(s) 68, 1009
FauNDI CATATG 1 cut(s) 338
FbaI TGATCA 1 cut(s) 871
FblI GTMKAC 1 cut(s) 412
Fnu4HI GCNGC 5 cut(s) 82, 85, 861, 958, 1014
FokI GGATG 3 cut(s) 1223, 1373, 1412
Fsp4HI GCNGC 5 cut(s) 82, 85, 861, 958, 1014
FspBI CTAG 5 cut(s) 528, 761, 792, 1325, 1368
GlaI GCGC 1 cut(s) 1308
GluI GCNGC 5 cut(s) 82, 85, 861, 958, 1014
GsaI CCCAGC 1 cut(s) 39
GsuI CTGGAG 2 cut(s) 1008, 1248
HaeII RGCGCY 1 cut(s) 1310
HaeIII GGCC 2 cut(s) 541, 783
HapII CCGG 6 cut(s) 40, 64, 473, 784, 1000, 1358
HgaI GACGC 1 cut(s) 1337
HhaI GCGC 1 cut(s) 1309
Hin1II CATG 6 cut(s) 167, 560, 821, 889, 1185, 1240
Hin6I GCGC 1 cut(s) 1307
HinP1I GCGC 1 cut(s) 1307
HindIII AAGCTT 1 cut(s) 447
HinfI GANTC 9 cut(s) 76, 94, 196, 239, 278, 839, 980, 1187, 1261
HpaII CCGG 6 cut(s) 40, 64, 473, 784, 1000, 1358
HphI GGTGA 3 cut(s) 118, 289, 1313
Hpy166II GTNNAC 1 cut(s) 413
Hpy188I TCNGA 6 cut(s) 211, 264, 383, 744, 1174, 1210
Hpy188III TCNNGA 2 cut(s) 557, 987
Hpy8I GTNNAC 1 cut(s) 413
Hpy99I CGWCG 2 cut(s) 142, 278
HpyAV CCTTC 3 cut(s) 182, 292, 419
HpyCH4III ACNGT 2 cut(s) 130, 707
HpyCH4IV ACGT 4 cut(s) 176, 523, 720, 1050
HpyCH4V TGCA 6 cut(s) 658, 957, 1006, 1127, 1256, 1392
HpyF10VI GCNNNNNNNGC 3 cut(s) 590, 611, 1154
HpyF3I CTNAG 4 cut(s) 243, 380, 935, 1195
HpySE526I ACGT 4 cut(s) 176, 523, 720, 1050
Hsp92II CATG 6 cut(s) 167, 560, 821, 889, 1185, 1240
HspAI GCGC 1 cut(s) 1307
KroI GCCGGC 1 cut(s) 63
KroNI GCCGGC 1 cut(s) 65
Ksp22I TGATCA 1 cut(s) 871
Kzo9I GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 1 cut(s) 212
Lsp1109I GCAGC 3 cut(s) 872, 969, 1000
LweI GCATC 2 cut(s) 255, 1347
MaeI CTAG 5 cut(s) 528, 761, 792, 1325, 1368
MaeII ACGT 4 cut(s) 176, 523, 720, 1050
MaeIII GTNAC 1 cut(s) 519
MalI GATC 9 cut(s) 100, 316, 378, 393, 471, 712, 873, 933, 1171
MbiI CCGCTC 1 cut(s) 1406
MboI GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
MfeI CAATTG 2 cut(s) 621, 664
MflI RGATCY 3 cut(s) 469, 710, 1169
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 6 cut(s) 122, 252, 621, 664, 751, 1133
MlyI GAGTC 5 cut(s) 70, 248, 272, 989, 1255
MnlI CCTC 7 cut(s) 186, 726, 768, 829, 982, 1053, 1304
MroNI GCCGGC 1 cut(s) 63
MseI TTAA 6 cut(s) 417, 453, 597, 729, 852, 1290
MslI CAYNNNNRTG 1 cut(s) 1241
MspA1I CMGCKG 1 cut(s) 329
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 6 cut(s) 40, 64, 473, 784, 1000, 1358
MspR9I CCNGG 5 cut(s) 543, 1000, 1001, 1227, 1358
MunI CAATTG 2 cut(s) 621, 664
MvaI CCWGG 2 cut(s) 543, 1227
MwoI GCNNNNNNNGC 3 cut(s) 590, 611, 1154
NaeI GCCGGC 1 cut(s) 65
NciI CCSGG 3 cut(s) 1000, 1001, 1358
NcoI CCATGG 1 cut(s) 817
NdeI CATATG 1 cut(s) 338
NdeII GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
NgoMIV GCCGGC 1 cut(s) 63
NlaIII CATG 6 cut(s) 167, 560, 821, 889, 1185, 1240
NmuCI GTSAC 1 cut(s) 519
NspI RCATGY 1 cut(s) 889
PagI TCATGA 1 cut(s) 556
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PdiI GCCGGC 1 cut(s) 65
PfeI GAWTC 4 cut(s) 94, 196, 839, 1187
PfoI TCCNGGA 1 cut(s) 1356
PkrI GCNGC 5 cut(s) 83, 86, 862, 959, 1015
PleI GAGTC 5 cut(s) 70, 247, 272, 988, 1255
PmaCI CACGTG 2 cut(s) 177, 524
PmlI CACGTG 2 cut(s) 177, 524
PpsI GAGTC 5 cut(s) 70, 247, 272, 988, 1255
Ppu21I YACGTR 4 cut(s) 177, 524, 721, 1051
Psp6I CCWGG 2 cut(s) 541, 1225
PspCI CACGTG 2 cut(s) 177, 524
PspFI CCCAGC 1 cut(s) 35
PspGI CCWGG 2 cut(s) 541, 1225
PspPI GGNCC 3 cut(s) 1250, 1364, 1422
PsuI RGATCY 3 cut(s) 469, 710, 1169
PvuII CAGCTG 1 cut(s) 329
RseI CAYNNNNRTG 1 cut(s) 1241
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 6 cut(s) 417, 453, 597, 729, 852, 1290
SatI GCNGC 5 cut(s) 82, 85, 861, 958, 1014
Sau3AI GATC 9 cut(s) 98, 314, 376, 391, 469, 710, 871, 931, 1169
Sau96I GGNCC 3 cut(s) 1250, 1364, 1422
SchI GAGTC 5 cut(s) 70, 248, 272, 989, 1255
ScrFI CCNGG 5 cut(s) 543, 1000, 1001, 1227, 1358
SduI GDGCHC 1 cut(s) 176
SfaNI GCATC 2 cut(s) 255, 1347
SinI GGWCC 3 cut(s) 1250, 1364, 1422
SmaI CCCGGG 1 cut(s) 1001
SmiMI CAYNNNNRTG 1 cut(s) 1241
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
Sse9I AATT 6 cut(s) 122, 252, 621, 664, 751, 1133
SsiI CCGC 7 cut(s) 61, 82, 85, 915, 1016, 1404, 1443
SspI AATATT 1 cut(s) 641
SspMI CTAG 5 cut(s) 528, 761, 792, 1325, 1368
StyD4I CCNGG 5 cut(s) 541, 998, 999, 1225, 1356
StyI CCWWGG 1 cut(s) 817
TaaI ACNGT 2 cut(s) 130, 707
TaiI ACGT 4 cut(s) 179, 526, 723, 1053
TaqI TCGA 9 cut(s) 74, 97, 107, 273, 285, 369, 390, 489, 733
TasI AATT 6 cut(s) 122, 252, 621, 664, 751, 1133
TauI GCSGC 2 cut(s) 84, 87
TfiI GAWTC 4 cut(s) 94, 196, 839, 1187
Tru1I TTAA 6 cut(s) 417, 453, 597, 729, 852, 1290
Tru9I TTAA 6 cut(s) 417, 453, 597, 729, 852, 1290
TscAI CASTG 1 cut(s) 1348
TseFI GTSAC 1 cut(s) 519
TseI GCWGC 3 cut(s) 860, 957, 1013
Tsp45I GTSAC 1 cut(s) 519
TspDTI ATGAA 3 cut(s) 679, 896, 1082
TspGWI ACGGA 2 cut(s) 208, 1376
TspMI CCCGGG 1 cut(s) 999
TspRI CASTG 1 cut(s) 1348
Vha464I CTTAAG 1 cut(s) 416
VpaK11BI GGWCC 3 cut(s) 1250, 1364, 1422
XapI RAATTY 1 cut(s) 252
XceI RCATGY 1 cut(s) 889
XmaI CCCGGG 1 cut(s) 999
XmiI GTMKAC 1 cut(s) 412
XspI CTAG 5 cut(s) 528, 761, 792, 1325, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.