Rh5AG290700

Phosphoglycerate mutase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
39838415 .. 39842395
3981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG290700.1

Sequence Viewer

Length: 1512 bp
ATGCTATCAGTCACTCCCCATCTCCTTCTCCACAGAAACTCCACCCTCTTCTTCTTCCCATCATTCCCAATCCGTACGAGGCCTCCGAGCCCCTTGAGTATCTCACGATGCTCTTCGGGCCTCCAAGAGGCCAAGGACACAGATCAGCTCCGATCGGACGAGCTCTCCGCCTCGTCTCCGTTCCCCGCCGTCAAGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAGAGCACGTGGAACGAGGAAGGTAGGATCCAAGGCAGCTCCAATTTCTCAGTGCTCACCAACAAAGGCGAGGCTCAGGCCCAGACTTCCCGCCAAATGCTCATCGGAGATGCCTTCGATGTCTGCTTCGCCAGTCCCTTGGCACGGTCAAAGAGAACAGCTGAAATTATATGGGGCACTCGCAAAGAGGAAATGATTATGGATTTTGATTTGAGGGAAATCGACTTGTACTCATTTCAAGGCCTCTTAAAGCATGAGGGAAAAGAAAAGTTTGGTGCAGCTTTTCAGAAATGGCAGGTAGATGCTCCAAATTTTAGCATTGATGATCATTATCCAGTGAGAGAGTTATGGGCACGTGCTAGGAGCTGCTGGACTAGAATACTATTGCATGAAAGCAGGTCTGTTCTTGTGGTTGCTCATAATGCTGTTAATCAGGCTCTCGTTGCAACAGCCATTGGACTGGGAACAGAGTATTTCAGGACTTTAGTTCAGGGCAATTGTGGTGTAAGCGTACTGGACTTCACCCCACGTGCTGAGGGTGGATCACCATATATCTGCCTCAATCGTCTAAACCAGACCCCAAGTTCACCTATTGAAGCTGGAAGTTCAGGGGGAAGGAAAACTAGCAAGCGGATCATACTTGTTTGTCATGGATCCACACAAATAAATGCAGAGCCAATGGACATGCTTGGAGTTATAAAGGCCCAGAAAATTGCCGAGCTACTTCTTGATTTAAAAGTGAACTCTATAGTTAGCAGTCCTAAGGAAGCTTGTGTTGAAACAGCGATTGCCATCTCCAGAGTACAAGAAGCTGCAGATCGTTTGGGAGCTGACTCTGTGCCACGCTCTGTGGAGATGAAGCAGATGGAGAACCTTGATGTTGAAAACATTCTTCAGCAGTCAAATAAGAATGAAATGAAGATTCCATCTCTTCAACCCGGTTGGCTTAATGGGTTTGAGGATAGAGTCGTGGAAGCTGTGTGGGATCAATCTGAGAAGGCCTGGCAGTCTCTGCTAGAAGAAGTAGCTGATGAAGCAGCACCGGAAAAAAATGTTGTTGCAGTTGGTCATCCTGCATTGCACATAGCATTGCTGGGGCACTGCCTGAATTTGACAAAAGAATGGTTGGGATCATTTCATCTTGATACGGGAAGCATCAGTATCATTGATTTTCCAGATGGTCCTAGTGGGAGAGGAGTTATTCGGTGCATAAACTATACTGCCCATTTGGGGAGATGGTCAGTACCTATAGCCAAATCAACAGTAAACGATAAAAATATTTAG

Protein Analysis

503

Amino Acids

55.5

Weight (kDa)

6.52

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 70 - 253 1.7e-39 Histidine phosphatase superfamily (branch 1)
His_Phos_1 PF00300 288 - 470 3e-12 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 926
Acc36I ACCTGC 2 cut(s) 514, 615
AciI CCGC 5 cut(s) 168, 186, 197, 319, 859
AclWI GGATC 8 cut(s) 250, 263, 778, 869, 876, 889, 1221, 1366
AcsI RAATTY 2 cut(s) 538, 1336
AcuI CTGAAG 1 cut(s) 1106
AcvI CACGTG 3 cut(s) 237, 584, 758
AfaI GTAC 5 cut(s) 76, 458, 741, 1032, 1473
AfiI CCNNNNNNNGG 3 cut(s) 127, 372, 1458
AgsI TTSAA 5 cut(s) 467, 824, 1007, 1112, 1163
AjnI CCWGG 1 cut(s) 1229
Alw21I GWGCWC 3 cut(s) 165, 236, 285
Alw26I GTCTC 2 cut(s) 180, 1242
AlwI GGATC 8 cut(s) 250, 263, 778, 869, 876, 889, 1221, 1366
AlwNI CAGNNNCTG 1 cut(s) 1240
AoxI GGCC 7 cut(s) 80, 118, 129, 306, 469, 930, 1227
ApeKI GCWGC 5 cut(s) 264, 506, 594, 1040, 1265
ApoI RAATTY 2 cut(s) 538, 1336
Asp700I GAANNNNTTC 1 cut(s) 1116
AspS9I GGNCC 4 cut(s) 118, 307, 931, 1409
AsuC2I CCSGG 1 cut(s) 1167
AsuHPI GGTGA 5 cut(s) 229, 277, 742, 765, 807
AvaII GGWCC 1 cut(s) 1409
AxyI CCTNAGG 1 cut(s) 990
BaeGI GKGCMC 3 cut(s) 407, 583, 1329
BamHI GGATCC 2 cut(s) 255, 881
BanII GRGCYC 2 cut(s) 92, 165
BbrPI CACGTG 3 cut(s) 237, 584, 758
Bbv12I GWGCWC 3 cut(s) 165, 236, 285
BbvCI CCTCAGC 1 cut(s) 762
BbvI GCAGC 5 cut(s) 276, 518, 581, 1027, 1277
BccI CCATC 7 cut(s) 27, 67, 1028, 1087, 1162, 1400, 1458
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 1 cut(s) 1231
BclI TGATCA 1 cut(s) 553
BcnI CCSGG 1 cut(s) 1167
BcoDI GTCTC 2 cut(s) 180, 1242
BfaI CTAG 5 cut(s) 588, 603, 852, 1244, 1413
BfmI CTRYAG 3 cut(s) 975, 1041, 1476
BfuAI ACCTGC 2 cut(s) 514, 615
BglI GCCNNNNNGGC 1 cut(s) 194
BisI GCNGC 6 cut(s) 198, 265, 507, 595, 1041, 1266
BlsI GCNGC 6 cut(s) 199, 266, 508, 596, 1042, 1267
Bme1390I CCNGG 2 cut(s) 1167, 1231
Bme18I GGWCC 1 cut(s) 1409
BmgT120I GGNCC 4 cut(s) 118, 307, 931, 1409
BmiI GGNNCC 2 cut(s) 257, 883
BmrFI CCNGG 2 cut(s) 1167, 1231
BmrI ACTGGG 1 cut(s) 698
BmsI GCATC 4 cut(s) 98, 328, 520, 1392
BmuI ACTGGG 1 cut(s) 698
BpmI CTGGAG 1 cut(s) 1009
Bpu10I CCTNAGC 2 cut(s) 303, 762
BpuEI CTTGAG 1 cut(s) 115
BpuMI CCSGG 1 cut(s) 1167
BsaAI YACGTR 3 cut(s) 237, 584, 758
BsaBI GATNNNNATC 2 cut(s) 558, 1019
BsaJI CCNNGG 3 cut(s) 132, 259, 366
BsaWI WCCGGW 1 cut(s) 1270
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 67, 97, 149, 179
Bsc4I CCNNNNNNNGG 3 cut(s) 127, 372, 1458
Bse1I ACTGG 4 cut(s) 360, 563, 693, 747
Bse21I CCTNAGG 1 cut(s) 990
Bse3DI GCAATG 2 cut(s) 1304, 1316
Bse8I GATNNNNATC 2 cut(s) 558, 1019
BseBI CCWGG 1 cut(s) 1231
BseDI CCNNGG 3 cut(s) 132, 259, 366
BseGI GGATG 1 cut(s) 1297
BseJI GATNNNNATC 2 cut(s) 558, 1019
BseLI CCNNNNNNNGG 3 cut(s) 127, 372, 1458
BseMI GCAATG 2 cut(s) 1304, 1316
BseMII CTCAG 4 cut(s) 291, 317, 753, 1212
BseNI ACTGG 4 cut(s) 360, 563, 693, 747
BseRI GAGGAG 1 cut(s) 1437
BseSI GKGCMC 3 cut(s) 407, 583, 1329
BseXI GCAGC 5 cut(s) 276, 518, 581, 1027, 1277
BseYI CCCAGC 1 cut(s) 1321
BsgI GTGCAG 1 cut(s) 525
Bsh1285I CGRYCG 1 cut(s) 155
BshFI GGCC 7 cut(s) 82, 120, 131, 308, 471, 932, 1229
BsiEI CGRYCG 1 cut(s) 155
BsiHKAI GWGCWC 3 cut(s) 165, 236, 285
BsiSI CCGG 2 cut(s) 1167, 1271
BsiWI CGTACG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 348
BslI CCNNNNNNNGG 3 cut(s) 127, 372, 1458
BsmAI GTCTC 2 cut(s) 180, 1242
BsmBI CGTCTC 1 cut(s) 180
BsmFI GGGAC 1 cut(s) 348
BsnI GGCC 7 cut(s) 82, 120, 131, 308, 471, 932, 1229
Bsp1286I GDGCHC 7 cut(s) 92, 165, 236, 285, 407, 583, 1329
BspACI CCGC 5 cut(s) 168, 186, 197, 319, 859
BspANI GGCC 7 cut(s) 82, 120, 131, 308, 471, 932, 1229
BspCNI CTCAG 4 cut(s) 290, 316, 754, 1213
BspLI GGNNCC 2 cut(s) 257, 883
BspMAI CTGCAG 1 cut(s) 1045
BspMI ACCTGC 2 cut(s) 514, 615
BspPI GGATC 8 cut(s) 250, 263, 778, 869, 876, 889, 1221, 1366
BspQI GCTCTTC 1 cut(s) 118
BsrDI GCAATG 2 cut(s) 1304, 1316
BsrI ACTGG 4 cut(s) 360, 563, 693, 747
BssECI CCNNGG 3 cut(s) 132, 259, 366
BssT1I CCWWGG 3 cut(s) 132, 259, 366
Bst2UI CCWGG 1 cut(s) 1231
Bst4CI ACNGT 2 cut(s) 375, 1492
Bst6I CTCTTC 4 cut(s) 53, 118, 197, 1164
BstAPI GCANNNNNTGC 1 cut(s) 1240
BstBAI YACGTR 3 cut(s) 237, 584, 758
BstC8I GCNNGC 1 cut(s) 857
BstDEI CTNAG 5 cut(s) 277, 303, 762, 990, 1221
BstENI CCTNNNNNAGG 1 cut(s) 125
BstF5I GGATG 1 cut(s) 1297
BstMAI GTCTC 2 cut(s) 180, 1242
BstMCI CGRYCG 1 cut(s) 155
BstMWI GCNNNNNNNGC 6 cut(s) 117, 194, 650, 671, 1240, 1262
BstNI CCWGG 1 cut(s) 1231
BstNSI RCATGY 1 cut(s) 916
BstSCI CCNGG 2 cut(s) 1165, 1229
BstSFI CTRYAG 3 cut(s) 975, 1041, 1476
BstSLI GKGCMC 3 cut(s) 407, 583, 1329
BstV1I GCAGC 5 cut(s) 276, 518, 581, 1027, 1277
BstX2I RGATCY 2 cut(s) 255, 881
BstXI CCANNNNNNTGG 2 cut(s) 367, 688
BstYI RGATCY 2 cut(s) 255, 881
Bsu36I CCTNAGG 1 cut(s) 990
BsuRI GGCC 7 cut(s) 82, 120, 131, 308, 471, 932, 1229
BtsCI GGATG 1 cut(s) 1297
BtsI GCAGTG 1 cut(s) 1327
BtsIMutI CAGTG 3 cut(s) 285, 570, 1327
BveI ACCTGC 2 cut(s) 514, 615
Cac8I GCNNGC 1 cut(s) 857
CaiI CAGNNNCTG 1 cut(s) 1240
Cfr13I GGNCC 4 cut(s) 118, 307, 931, 1409
Csp6I GTAC 5 cut(s) 75, 457, 740, 1031, 1472
CviAII CATG 4 cut(s) 482, 617, 878, 913
CviQI GTAC 5 cut(s) 75, 457, 740, 1031, 1472
DdeI CTNAG 5 cut(s) 277, 303, 762, 990, 1221
DraI TTTAAA 1 cut(s) 963
Eam1104I CTCTTC 4 cut(s) 53, 118, 197, 1164
EarI CTCTTC 4 cut(s) 53, 118, 197, 1164
EciI GGCGGA 1 cut(s) 157
Ecl136II GAGCTC 1 cut(s) 163
Eco130I CCWWGG 3 cut(s) 132, 259, 366
Eco147I AGGCCT 3 cut(s) 82, 471, 1229
Eco24I GRGCYC 2 cut(s) 92, 165
Eco47I GGWCC 1 cut(s) 1409
Eco53kI GAGCTC 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 1106
Eco72I CACGTG 3 cut(s) 237, 584, 758
Eco81I CCTNAGG 1 cut(s) 990
EcoICRI GAGCTC 1 cut(s) 163
EcoNI CCTNNNNNAGG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 1229
EcoT14I CCWWGG 3 cut(s) 132, 259, 366
EcoT38I GRGCYC 2 cut(s) 92, 165
ErhI CCWWGG 3 cut(s) 132, 259, 366
Esp3I CGTCTC 1 cut(s) 180
FaeI CATG 4 cut(s) 485, 620, 881, 916
FaqI GGGAC 1 cut(s) 348
FatI CATG 4 cut(s) 481, 616, 877, 912
FauI CCCGC 2 cut(s) 193, 326
FbaI TGATCA 1 cut(s) 553
Fnu4HI GCNGC 6 cut(s) 198, 265, 507, 595, 1041, 1266
FokI GGATG 1 cut(s) 1284
FriOI GRGCYC 2 cut(s) 92, 165
Fsp4HI GCNGC 6 cut(s) 198, 265, 507, 595, 1041, 1266
FspBI CTAG 5 cut(s) 588, 603, 852, 1244, 1413
GluI GCNGC 6 cut(s) 198, 265, 507, 595, 1041, 1266
GsaI CCCAGC 1 cut(s) 1325
GsuI CTGGAG 1 cut(s) 1009
HaeIII GGCC 7 cut(s) 82, 120, 131, 308, 471, 932, 1229
HapII CCGG 2 cut(s) 1167, 1271
Hin1II CATG 4 cut(s) 485, 620, 881, 916
HindIII AAGCTT 1 cut(s) 996
HinfI GANTC 3 cut(s) 1061, 1150, 1194
HpaII CCGG 2 cut(s) 1167, 1271
HphI GGTGA 5 cut(s) 229, 277, 742, 765, 807
Hpy166II GTNNAC 3 cut(s) 815, 970, 1495
Hpy188I TCNGA 6 cut(s) 87, 152, 157, 335, 516, 1222
Hpy188III TCNNGA 6 cut(s) 105, 706, 956, 1026, 1370, 1403
Hpy8I GTNNAC 3 cut(s) 815, 970, 1495
HpyAV CCTTC 5 cut(s) 35, 242, 352, 837, 1219
HpyCH4III ACNGT 2 cut(s) 375, 1492
HpyCH4IV ACGT 3 cut(s) 236, 583, 757
HpyCH4V TGCA 9 cut(s) 506, 616, 674, 899, 1043, 1289, 1304, 1309, 1437
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 194, 650, 671, 1240, 1262
HpyF3I CTNAG 5 cut(s) 277, 303, 762, 990, 1221
HpySE526I ACGT 3 cut(s) 236, 583, 757
Hsp92II CATG 4 cut(s) 485, 620, 881, 916
Ksp22I TGATCA 1 cut(s) 553
LguI GCTCTTC 1 cut(s) 118
LmnI GCTCC 5 cut(s) 153, 272, 538, 591, 1055
Lsp1109I GCAGC 5 cut(s) 276, 518, 581, 1027, 1277
LweI GCATC 4 cut(s) 98, 328, 520, 1392
MaeI CTAG 5 cut(s) 588, 603, 852, 1244, 1413
MaeII ACGT 3 cut(s) 236, 583, 757
MaeIII GTNAC 1 cut(s) 10
MboII GAAGA 9 cut(s) 40, 43, 46, 105, 214, 1112, 1151, 1159, 1259
MfeI CAATTG 1 cut(s) 724
MflI RGATCY 2 cut(s) 255, 881
MhlI GDGCHC 7 cut(s) 92, 165, 236, 285, 407, 583, 1329
MluCI AATT 6 cut(s) 271, 393, 538, 724, 939, 1336
MlyI GAGTC 2 cut(s) 1055, 1203
MroXI GAANNNNTTC 1 cut(s) 1116
MseI TTAA 4 cut(s) 476, 657, 962, 1176
MspA1I CMGCKG 1 cut(s) 389
MspI CCGG 2 cut(s) 1167, 1271
MspR9I CCNGG 2 cut(s) 1167, 1231
MunI CAATTG 1 cut(s) 724
MvaI CCWGG 1 cut(s) 1231
MwoI GCNNNNNNNGC 6 cut(s) 117, 194, 650, 671, 1240, 1262
NciI CCSGG 1 cut(s) 1167
NlaIII CATG 4 cut(s) 485, 620, 881, 916
NlaIV GGNNCC 2 cut(s) 257, 883
NmeAIII GCCGAG 1 cut(s) 970
NmuCI GTSAC 1 cut(s) 10
NspI RCATGY 1 cut(s) 916
PceI AGGCCT 3 cut(s) 82, 471, 1229
PciSI GCTCTTC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 1116
PfeI GAWTC 1 cut(s) 1150
Pfl23II CGTACG 1 cut(s) 74
PkrI GCNGC 6 cut(s) 199, 266, 508, 596, 1042, 1267
Ple19I CGATCG 1 cut(s) 155
PleI GAGTC 2 cut(s) 1055, 1202
PmaCI CACGTG 3 cut(s) 237, 584, 758
PmlI CACGTG 3 cut(s) 237, 584, 758
PpsI GAGTC 2 cut(s) 1055, 1202
Ppu21I YACGTR 3 cut(s) 237, 584, 758
PsiI TTATAA 1 cut(s) 926
Psp124BI GAGCTC 1 cut(s) 165
Psp6I CCWGG 1 cut(s) 1229
PspCI CACGTG 3 cut(s) 237, 584, 758
PspFI CCCAGC 1 cut(s) 1321
PspGI CCWGG 1 cut(s) 1229
PspLI CGTACG 1 cut(s) 74
PspN4I GGNNCC 2 cut(s) 257, 883
PspPI GGNCC 4 cut(s) 118, 307, 931, 1409
PstI CTGCAG 1 cut(s) 1045
PstNI CAGNNNCTG 1 cut(s) 1240
PsuI RGATCY 2 cut(s) 255, 881
PvuI CGATCG 1 cut(s) 155
PvuII CAGCTG 1 cut(s) 389
RsaI GTAC 5 cut(s) 76, 458, 741, 1032, 1473
RsaNI GTAC 5 cut(s) 75, 457, 740, 1031, 1472
SacI GAGCTC 1 cut(s) 165
SapI GCTCTTC 1 cut(s) 118
SaqAI TTAA 4 cut(s) 476, 657, 962, 1176
SatI GCNGC 6 cut(s) 198, 265, 507, 595, 1041, 1266
Sau96I GGNCC 4 cut(s) 118, 307, 931, 1409
SchI GAGTC 2 cut(s) 1055, 1203
ScrFI CCNGG 2 cut(s) 1167, 1231
SduI GDGCHC 7 cut(s) 92, 165, 236, 285, 407, 583, 1329
SfaNI GCATC 4 cut(s) 98, 328, 520, 1392
SfcI CTRYAG 3 cut(s) 975, 1041, 1476
SinI GGWCC 1 cut(s) 1409
SmlI CTYRAG 1 cut(s) 94
SmoI CTYRAG 1 cut(s) 94
Sse9I AATT 6 cut(s) 271, 393, 538, 724, 939, 1336
SseBI AGGCCT 3 cut(s) 82, 471, 1229
SsiI CCGC 5 cut(s) 168, 186, 197, 319, 859
SspI AATATT 1 cut(s) 1507
SspMI CTAG 5 cut(s) 588, 603, 852, 1244, 1413
SstI GAGCTC 1 cut(s) 165
StuI AGGCCT 3 cut(s) 82, 471, 1229
StyD4I CCNGG 2 cut(s) 1165, 1229
StyI CCWWGG 3 cut(s) 132, 259, 366
TaaI ACNGT 2 cut(s) 375, 1492
TaiI ACGT 3 cut(s) 239, 586, 760
TaqI TCGA 2 cut(s) 345, 450
TasI AATT 6 cut(s) 271, 393, 538, 724, 939, 1336
TatI WGTACW 2 cut(s) 456, 1030
TauI GCSGC 1 cut(s) 200
TfiI GAWTC 1 cut(s) 1150
Tru1I TTAA 4 cut(s) 476, 657, 962, 1176
Tru9I TTAA 4 cut(s) 476, 657, 962, 1176
TscAI CASTG 3 cut(s) 285, 570, 1334
TseFI GTSAC 1 cut(s) 10
TseI GCWGC 5 cut(s) 264, 506, 594, 1040, 1265
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 6 cut(s) 633, 1100, 1155, 1160, 1275, 1355
TspGWI ACGGA 2 cut(s) 62, 168
TspRI CASTG 3 cut(s) 285, 570, 1334
VpaK11BI GGWCC 1 cut(s) 1409
XagI CCTNNNNNAGG 1 cut(s) 125
XapI RAATTY 2 cut(s) 538, 1336
XceI RCATGY 1 cut(s) 916
XmnI GAANNNNTTC 1 cut(s) 1116
XspI CTAG 5 cut(s) 588, 603, 852, 1244, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.