Phosphoglycerate mutase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22620 AT5G22620 AT5G22620 AT5G22620 AT5G22620 AT5G22620 |
| fragaria_vesca | FvH4_3g24210 |
| malus_domestica | MD11G1158000.v1.1 |
| prunus_persica | Prupe.6G119800_v2.0.a1 Prupe.6G119800_v2.0.a1 Prupe.6G119800_v2.0.a1 |
| pyrus_communis | pycom03g09120 pycom03g09130 pycom11g12830 |
| rosa_chinensis | RchiOBHm_Chr5g0043311 |
| rosa_laevigata | RLG00000034178 |
| rosa_multiflora | Rmu_sc0000060.1_g000001 Rmu_sc0000060.1_g000024 Rmu_sc0017676.1_g000001 Rmu_sc0025644.1_g000001 Rmu_sc0042577.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00037510 Rroxscaffold_7G00214910 |
| rosa_rugosa | Rorug05G0205200 |
| rosa_samantha | Rh5AG290700 Rh5AG290900 Rh5BG297300 Rh5CG327100 Rh5DG306900 |
| rosa_wichuraiana | Rw5G026900 Rw5G026970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 935 |
| AatII | GACGTC | 1 cut(s) | 369 |
| Acc36I | ACCTGC | 1 cut(s) | 633 |
| AccB1I | GGYRCC | 1 cut(s) | 1276 |
| AccI | GTMKAC | 1 cut(s) | 1503 |
| AccII | CGCG | 1 cut(s) | 118 |
| AciI | CCGC | 6 cut(s) | 76, 86, 215, 337, 786, 868 |
| AclWI | GGATC | 8 cut(s) | 119, 268, 281, 878, 885, 898, 1230, 1375 |
| AcsI | RAATTY | 1 cut(s) | 556 |
| AcuI | CTGAAG | 1 cut(s) | 1115 |
| AcvI | CACGTG | 2 cut(s) | 255, 602 |
| AcyI | GRCGYC | 1 cut(s) | 366 |
| AfaI | GTAC | 2 cut(s) | 476, 1041 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 139, 390, 1035, 1467 |
| AflIII | ACRYGT | 1 cut(s) | 186 |
| AgsI | TTSAA | 5 cut(s) | 533, 833, 973, 1016, 1121 |
| AhlI | ACTAGT | 1 cut(s) | 860 |
| AjiI | CACGTC | 1 cut(s) | 189 |
| AjnI | CCWGG | 1 cut(s) | 1034 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1144, 1176 |
| Alw21I | GWGCWC | 3 cut(s) | 183, 254, 303 |
| Alw26I | GTCTC | 1 cut(s) | 1251 |
| AlwI | GGATC | 8 cut(s) | 119, 268, 281, 878, 885, 898, 1230, 1375 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1249 |
| AoxI | GGCC | 4 cut(s) | 129, 324, 487, 939 |
| ApeKI | GCWGC | 5 cut(s) | 282, 524, 541, 612, 1049 |
| ApoI | RAATTY | 1 cut(s) | 556 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 356, 388 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1125 |
| AspLEI | GCGC | 1 cut(s) | 1078 |
| AspS9I | GGNCC | 8 cut(s) | 130, 142, 170, 325, 487, 618, 940, 1418 |
| AsuC2I | CCSGG | 2 cut(s) | 203, 1176 |
| AsuHPI | GGTGA | 7 cut(s) | 247, 295, 365, 760, 783, 1163, 1298 |
| AvaII | GGWCC | 4 cut(s) | 142, 170, 618, 1418 |
| AxyI | CCTNAGG | 1 cut(s) | 107 |
| BaeGI | GKGCMC | 2 cut(s) | 601, 1338 |
| BamHI | GGATCC | 2 cut(s) | 273, 890 |
| BanI | GGYRCC | 1 cut(s) | 1276 |
| BanII | GRGCYC | 1 cut(s) | 183 |
| BbrPI | CACGTG | 2 cut(s) | 255, 602 |
| Bbv12I | GWGCWC | 3 cut(s) | 183, 254, 303 |
| BbvCI | CCTCAGC | 1 cut(s) | 780 |
| BbvI | GCAGC | 5 cut(s) | 294, 536, 553, 599, 1036 |
| BccI | CCATC | 6 cut(s) | 70, 563, 1037, 1096, 1409, 1467 |
| BceAI | ACGGC | 3 cut(s) | 163, 181, 1290 |
| BciT130I | CCWGG | 1 cut(s) | 1036 |
| BcnI | CCSGG | 2 cut(s) | 203, 1176 |
| BcoDI | GTCTC | 1 cut(s) | 1251 |
| BcuI | ACTAGT | 1 cut(s) | 860 |
| BfaI | CTAG | 5 cut(s) | 96, 606, 653, 861, 1422 |
| BfmI | CTRYAG | 2 cut(s) | 984, 1050 |
| BfuAI | ACCTGC | 1 cut(s) | 633 |
| BisI | GCNGC | 6 cut(s) | 216, 283, 525, 542, 613, 1050 |
| BlpI | GCTNAGC | 1 cut(s) | 954 |
| BlsI | GCNGC | 6 cut(s) | 217, 284, 526, 543, 614, 1051 |
| Bme1390I | CCNGG | 3 cut(s) | 203, 1036, 1176 |
| Bme18I | GGWCC | 4 cut(s) | 142, 170, 618, 1418 |
| BmgBI | CACGTC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 8 cut(s) | 130, 142, 170, 325, 487, 618, 940, 1418 |
| BmiI | GGNNCC | 4 cut(s) | 151, 275, 892, 1278 |
| BmrFI | CCNGG | 3 cut(s) | 203, 1036, 1176 |
| BmrI | ACTGGG | 2 cut(s) | 575, 716 |
| BmsI | GCATC | 4 cut(s) | 110, 538, 1372, 1401 |
| BmuI | ACTGGG | 2 cut(s) | 575, 716 |
| BpmI | CTGGAG | 1 cut(s) | 1018 |
| Bpu10I | CCTNAGC | 2 cut(s) | 321, 780 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 954 |
| BpuMI | CCSGG | 2 cut(s) | 203, 1176 |
| BsaAI | YACGTR | 2 cut(s) | 255, 602 |
| BsaHI | GRCGYC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 7 cut(s) | 145, 277, 384, 999, 1035, 1079, 1174 |
| BsaWI | WCCGGW | 2 cut(s) | 172, 1279 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 23, 53, 137, 167 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 139, 390, 1035, 1467 |
| Bse1I | ACTGG | 3 cut(s) | 378, 581, 711 |
| Bse21I | CCTNAGG | 1 cut(s) | 107 |
| Bse3DI | GCAATG | 2 cut(s) | 1313, 1325 |
| BseBI | CCWGG | 1 cut(s) | 1036 |
| BseDI | CCNNGG | 7 cut(s) | 145, 277, 384, 999, 1035, 1079, 1174 |
| BseGI | GGATG | 2 cut(s) | 62, 181 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 139, 390, 1035, 1467 |
| BseMI | GCAATG | 2 cut(s) | 1313, 1325 |
| BseMII | CTCAG | 5 cut(s) | 121, 335, 771, 945, 1221 |
| BseNI | ACTGG | 3 cut(s) | 378, 581, 711 |
| BseRI | GAGGAG | 2 cut(s) | 142, 145 |
| BseSI | GKGCMC | 2 cut(s) | 601, 1338 |
| BseXI | GCAGC | 5 cut(s) | 294, 536, 553, 599, 1036 |
| BseYI | CCCAGC | 1 cut(s) | 1330 |
| BsgI | GTGCAG | 2 cut(s) | 543, 927 |
| Bsh1236I | CGCG | 1 cut(s) | 118 |
| BshFI | GGCC | 4 cut(s) | 131, 326, 489, 941 |
| BshNI | GGYRCC | 1 cut(s) | 1276 |
| BsiHKAI | GWGCWC | 3 cut(s) | 183, 254, 303 |
| BsiSI | CCGG | 4 cut(s) | 173, 203, 1176, 1280 |
| BslFI | GGGAC | 3 cut(s) | 366, 434, 981 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 139, 390, 1035, 1467 |
| BsmAI | GTCTC | 1 cut(s) | 1251 |
| BsmFI | GGGAC | 3 cut(s) | 366, 434, 981 |
| BsnI | GGCC | 4 cut(s) | 131, 326, 489, 941 |
| Bsp1286I | GDGCHC | 5 cut(s) | 183, 254, 303, 601, 1338 |
| Bsp143I | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 954 |
| Bsp68I | TCGCGA | 1 cut(s) | 118 |
| BspACI | CCGC | 6 cut(s) | 76, 86, 215, 337, 786, 868 |
| BspANI | GGCC | 4 cut(s) | 131, 326, 489, 941 |
| BspCNI | CTCAG | 5 cut(s) | 120, 334, 772, 946, 1222 |
| BspFNI | CGCG | 1 cut(s) | 118 |
| BspLI | GGNNCC | 4 cut(s) | 151, 275, 892, 1278 |
| BspMAI | CTGCAG | 1 cut(s) | 1054 |
| BspMI | ACCTGC | 1 cut(s) | 633 |
| BspPI | GGATC | 8 cut(s) | 119, 268, 281, 878, 885, 898, 1230, 1375 |
| BspQI | GCTCTTC | 1 cut(s) | 130 |
| BspT107I | GGYRCC | 1 cut(s) | 1276 |
| BsrDI | GCAATG | 2 cut(s) | 1313, 1325 |
| BsrI | ACTGG | 3 cut(s) | 378, 581, 711 |
| BssECI | CCNNGG | 7 cut(s) | 145, 277, 384, 999, 1035, 1079, 1174 |
| BssMI | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| BssNI | GRCGYC | 1 cut(s) | 366 |
| BssT1I | CCWWGG | 3 cut(s) | 277, 384, 999 |
| Bst2UI | CCWGG | 1 cut(s) | 1036 |
| Bst4CI | ACNGT | 3 cut(s) | 393, 1083, 1501 |
| Bst6I | CTCTTC | 5 cut(s) | 27, 53, 130, 215, 1173 |
| BstACI | GRCGYC | 1 cut(s) | 366 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1249 |
| BstBAI | YACGTR | 2 cut(s) | 255, 602 |
| BstC8I | GCNNGC | 1 cut(s) | 758 |
| BstDEI | CTNAG | 5 cut(s) | 107, 321, 780, 954, 1230 |
| BstDSI | CCRYGG | 2 cut(s) | 145, 1079 |
| BstEII | GGTNACC | 1 cut(s) | 789 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 137 |
| BstF5I | GGATG | 2 cut(s) | 62, 181 |
| BstFNI | CGCG | 1 cut(s) | 118 |
| BstHHI | GCGC | 1 cut(s) | 1078 |
| BstKTI | GATC | 7 cut(s) | 114, 163, 276, 873, 893, 1225, 1370 |
| BstMAI | GTCTC | 1 cut(s) | 1251 |
| BstMBI | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 212, 238, 668, 689, 1073, 1249 |
| BstNI | CCWGG | 1 cut(s) | 1036 |
| BstNSI | RCATGY | 1 cut(s) | 925 |
| BstPI | GGTNACC | 1 cut(s) | 789 |
| BstSCI | CCNGG | 3 cut(s) | 201, 1034, 1174 |
| BstSFI | CTRYAG | 2 cut(s) | 984, 1050 |
| BstSLI | GKGCMC | 2 cut(s) | 601, 1338 |
| BstUI | CGCG | 1 cut(s) | 118 |
| BstV1I | GCAGC | 5 cut(s) | 294, 536, 553, 599, 1036 |
| BstX2I | RGATCY | 3 cut(s) | 111, 273, 890 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 385 |
| BstYI | RGATCY | 3 cut(s) | 111, 273, 890 |
| Bsu36I | CCTNAGG | 1 cut(s) | 107 |
| BsuRI | GGCC | 4 cut(s) | 131, 326, 489, 941 |
| BtgI | CCRYGG | 2 cut(s) | 145, 1079 |
| BtgZI | GCGATG | 1 cut(s) | 133 |
| BtrI | CACGTC | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 62, 181 |
| BtsI | GCAGTG | 1 cut(s) | 1336 |
| BtsIMutI | CAGTG | 2 cut(s) | 588, 1336 |
| BtuMI | TCGCGA | 1 cut(s) | 118 |
| BveI | ACCTGC | 1 cut(s) | 633 |
| Cac8I | GCNNGC | 1 cut(s) | 758 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1249 |
| CfoI | GCGC | 1 cut(s) | 1078 |
| Cfr13I | GGNCC | 8 cut(s) | 130, 142, 170, 325, 487, 618, 940, 1418 |
| CpoI | CGGWCCG | 1 cut(s) | 170 |
| Csp6I | GTAC | 2 cut(s) | 475, 1040 |
| CspI | CGGWCCG | 1 cut(s) | 170 |
| CviAII | CATG | 5 cut(s) | 635, 776, 887, 922, 1239 |
| CviQI | GTAC | 2 cut(s) | 475, 1040 |
| DdeI | CTNAG | 5 cut(s) | 107, 321, 780, 954, 1230 |
| DpnI | GATC | 7 cut(s) | 113, 162, 275, 872, 892, 1224, 1369 |
| DpnII | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| DraI | TTTAAA | 1 cut(s) | 210 |
| Eam1104I | CTCTTC | 5 cut(s) | 27, 53, 130, 215, 1173 |
| EarI | CTCTTC | 5 cut(s) | 27, 53, 130, 215, 1173 |
| Ecl136II | GAGCTC | 1 cut(s) | 181 |
| Eco130I | CCWWGG | 3 cut(s) | 277, 384, 999 |
| Eco24I | GRGCYC | 1 cut(s) | 183 |
| Eco47I | GGWCC | 4 cut(s) | 142, 170, 618, 1418 |
| Eco53kI | GAGCTC | 1 cut(s) | 181 |
| Eco57I | CTGAAG | 1 cut(s) | 1115 |
| Eco72I | CACGTG | 2 cut(s) | 255, 602 |
| Eco81I | CCTNAGG | 1 cut(s) | 107 |
| Eco91I | GGTNACC | 1 cut(s) | 789 |
| EcoICRI | GAGCTC | 1 cut(s) | 181 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 137 |
| EcoO109I | RGGNCCY | 1 cut(s) | 487 |
| EcoO65I | GGTNACC | 1 cut(s) | 789 |
| EcoRII | CCWGG | 1 cut(s) | 1034 |
| EcoT14I | CCWWGG | 3 cut(s) | 277, 384, 999 |
| EcoT38I | GRGCYC | 1 cut(s) | 183 |
| ErhI | CCWWGG | 3 cut(s) | 277, 384, 999 |
| FaeI | CATG | 5 cut(s) | 638, 779, 890, 925, 1242 |
| FaqI | GGGAC | 3 cut(s) | 366, 434, 981 |
| FatI | CATG | 5 cut(s) | 634, 775, 886, 921, 1238 |
| FauI | CCCGC | 3 cut(s) | 93, 344, 779 |
| FblI | GTMKAC | 1 cut(s) | 1503 |
| Fnu4HI | GCNGC | 6 cut(s) | 216, 283, 525, 542, 613, 1050 |
| FokI | GGATG | 2 cut(s) | 49, 188 |
| FriOI | GRGCYC | 1 cut(s) | 183 |
| Fsp4HI | GCNGC | 6 cut(s) | 216, 283, 525, 542, 613, 1050 |
| FspBI | CTAG | 5 cut(s) | 96, 606, 653, 861, 1422 |
| GlaI | GCGC | 1 cut(s) | 1077 |
| GluI | GCNGC | 6 cut(s) | 216, 283, 525, 542, 613, 1050 |
| GsaI | CCCAGC | 1 cut(s) | 1334 |
| GsuI | CTGGAG | 1 cut(s) | 1018 |
| HaeIII | GGCC | 4 cut(s) | 131, 326, 489, 941 |
| HapII | CCGG | 4 cut(s) | 173, 203, 1176, 1280 |
| HhaI | GCGC | 1 cut(s) | 1078 |
| Hin1I | GRCGYC | 1 cut(s) | 366 |
| Hin1II | CATG | 5 cut(s) | 638, 779, 890, 925, 1242 |
| Hin6I | GCGC | 1 cut(s) | 1076 |
| HinP1I | GCGC | 1 cut(s) | 1076 |
| HindIII | AAGCTT | 1 cut(s) | 1005 |
| HinfI | GANTC | 3 cut(s) | 1070, 1159, 1203 |
| HpaII | CCGG | 4 cut(s) | 173, 203, 1176, 1280 |
| HphI | GGTGA | 7 cut(s) | 247, 295, 365, 760, 783, 1163, 1298 |
| Hpy166II | GTNNAC | 3 cut(s) | 145, 979, 1504 |
| Hpy188I | TCNGA | 5 cut(s) | 160, 170, 738, 1134, 1231 |
| Hpy188III | TCNNGA | 7 cut(s) | 109, 117, 724, 846, 965, 1379, 1412 |
| Hpy8I | GTNNAC | 3 cut(s) | 145, 979, 1504 |
| Hpy99I | CGWCG | 3 cut(s) | 193, 196, 368 |
| HpyAV | CCTTC | 5 cut(s) | 260, 370, 497, 846, 1228 |
| HpyCH4III | ACNGT | 3 cut(s) | 393, 1083, 1501 |
| HpyCH4IV | ACGT | 4 cut(s) | 188, 254, 366, 601 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 212, 238, 668, 689, 1073, 1249 |
| HpyF3I | CTNAG | 5 cut(s) | 107, 321, 780, 954, 1230 |
| HpySE526I | ACGT | 4 cut(s) | 188, 254, 366, 601 |
| Hsp92I | GRCGYC | 1 cut(s) | 366 |
| Hsp92II | CATG | 5 cut(s) | 638, 779, 890, 925, 1242 |
| HspAI | GCGC | 1 cut(s) | 1076 |
| Kzo9I | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| LguI | GCTCTTC | 1 cut(s) | 130 |
| LmnI | GCTCC | 4 cut(s) | 155, 290, 609, 1064 |
| Lsp1109I | GCAGC | 5 cut(s) | 294, 536, 553, 599, 1036 |
| LweI | GCATC | 4 cut(s) | 110, 538, 1372, 1401 |
| MaeI | CTAG | 5 cut(s) | 96, 606, 653, 861, 1422 |
| MaeII | ACGT | 4 cut(s) | 188, 254, 366, 601 |
| MaeIII | GTNAC | 4 cut(s) | 10, 353, 789, 1304 |
| MalI | GATC | 7 cut(s) | 113, 162, 275, 872, 892, 1224, 1369 |
| MboI | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| MboII | GAAGA | 9 cut(s) | 14, 17, 40, 43, 46, 117, 232, 1121, 1160 |
| MfeI | CAATTG | 1 cut(s) | 742 |
| MflI | RGATCY | 3 cut(s) | 111, 273, 890 |
| MhlI | GDGCHC | 5 cut(s) | 183, 254, 303, 601, 1338 |
| MluCI | AATT | 5 cut(s) | 289, 411, 556, 742, 948 |
| MlyI | GAGTC | 1 cut(s) | 1064 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1125 |
| MseI | TTAA | 4 cut(s) | 209, 494, 675, 1185 |
| MslI | CAYNNNNRTG | 2 cut(s) | 899, 1380 |
| MspA1I | CMGCKG | 1 cut(s) | 407 |
| MspI | CCGG | 4 cut(s) | 173, 203, 1176, 1280 |
| MspR9I | CCNGG | 3 cut(s) | 203, 1036, 1176 |
| MunI | CAATTG | 1 cut(s) | 742 |
| MvaI | CCWGG | 1 cut(s) | 1036 |
| MvnI | CGCG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 212, 238, 668, 689, 1073, 1249 |
| NciI | CCSGG | 2 cut(s) | 203, 1176 |
| NdeII | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| NlaIII | CATG | 5 cut(s) | 638, 779, 890, 925, 1242 |
| NlaIV | GGNNCC | 4 cut(s) | 151, 275, 892, 1278 |
| NmuCI | GTSAC | 4 cut(s) | 10, 353, 789, 1304 |
| NruI | TCGCGA | 1 cut(s) | 118 |
| NspI | RCATGY | 1 cut(s) | 925 |
| PciSI | GCTCTTC | 1 cut(s) | 130 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1125 |
| PfeI | GAWTC | 2 cut(s) | 1159, 1203 |
| PkrI | GCNGC | 6 cut(s) | 217, 284, 526, 543, 614, 1051 |
| PleI | GAGTC | 1 cut(s) | 1064 |
| PmaCI | CACGTG | 2 cut(s) | 255, 602 |
| PmlI | CACGTG | 2 cut(s) | 255, 602 |
| PpsI | GAGTC | 1 cut(s) | 1064 |
| Ppu21I | YACGTR | 2 cut(s) | 255, 602 |
| PsiI | TTATAA | 1 cut(s) | 935 |
| Psp124BI | GAGCTC | 1 cut(s) | 183 |
| Psp6I | CCWGG | 1 cut(s) | 1034 |
| PspCI | CACGTG | 2 cut(s) | 255, 602 |
| PspEI | GGTNACC | 1 cut(s) | 789 |
| PspFI | CCCAGC | 1 cut(s) | 1330 |
| PspGI | CCWGG | 1 cut(s) | 1034 |
| PspN4I | GGNNCC | 4 cut(s) | 151, 275, 892, 1278 |
| PspPI | GGNCC | 8 cut(s) | 130, 142, 170, 325, 487, 618, 940, 1418 |
| PstI | CTGCAG | 1 cut(s) | 1054 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1249 |
| PsuI | RGATCY | 3 cut(s) | 111, 273, 890 |
| PvuII | CAGCTG | 1 cut(s) | 407 |
| RruI | TCGCGA | 1 cut(s) | 118 |
| RsaI | GTAC | 2 cut(s) | 476, 1041 |
| RsaNI | GTAC | 2 cut(s) | 475, 1040 |
| RseI | CAYNNNNRTG | 2 cut(s) | 899, 1380 |
| Rsr2I | CGGWCCG | 1 cut(s) | 170 |
| RsrII | CGGWCCG | 1 cut(s) | 170 |
| SacI | GAGCTC | 1 cut(s) | 183 |
| SapI | GCTCTTC | 1 cut(s) | 130 |
| SaqAI | TTAA | 4 cut(s) | 209, 494, 675, 1185 |
| SatI | GCNGC | 6 cut(s) | 216, 283, 525, 542, 613, 1050 |
| Sau3AI | GATC | 7 cut(s) | 111, 160, 273, 870, 890, 1222, 1367 |
| Sau96I | GGNCC | 8 cut(s) | 130, 142, 170, 325, 487, 618, 940, 1418 |
| SchI | GAGTC | 1 cut(s) | 1064 |
| ScrFI | CCNGG | 3 cut(s) | 203, 1036, 1176 |
| SduI | GDGCHC | 5 cut(s) | 183, 254, 303, 601, 1338 |
| SfaNI | GCATC | 4 cut(s) | 110, 538, 1372, 1401 |
| SfcI | CTRYAG | 2 cut(s) | 984, 1050 |
| SinI | GGWCC | 4 cut(s) | 142, 170, 618, 1418 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 899, 1380 |
| SpeI | ACTAGT | 1 cut(s) | 860 |
| Sse9I | AATT | 5 cut(s) | 289, 411, 556, 742, 948 |
| SsiI | CCGC | 6 cut(s) | 76, 86, 215, 337, 786, 868 |
| SspI | AATATT | 1 cut(s) | 719 |
| SspMI | CTAG | 5 cut(s) | 96, 606, 653, 861, 1422 |
| SstI | GAGCTC | 1 cut(s) | 183 |
| StyD4I | CCNGG | 3 cut(s) | 201, 1034, 1174 |
| StyI | CCWWGG | 3 cut(s) | 277, 384, 999 |
| TaaI | ACNGT | 3 cut(s) | 393, 1083, 1501 |
| TaiI | ACGT | 4 cut(s) | 191, 257, 369, 604 |
| TaqI | TCGA | 3 cut(s) | 363, 468, 1380 |
| TasI | AATT | 5 cut(s) | 289, 411, 556, 742, 948 |
| TatI | WGTACW | 1 cut(s) | 474 |
| TauI | GCSGC | 1 cut(s) | 218 |
| TfiI | GAWTC | 2 cut(s) | 1159, 1203 |
| Tru1I | TTAA | 4 cut(s) | 209, 494, 675, 1185 |
| Tru9I | TTAA | 4 cut(s) | 209, 494, 675, 1185 |
| TscAI | CASTG | 2 cut(s) | 588, 1343 |
| TseFI | GTSAC | 4 cut(s) | 10, 353, 789, 1304 |
| TseI | GCWGC | 5 cut(s) | 282, 524, 541, 612, 1049 |
| Tsp45I | GTSAC | 4 cut(s) | 10, 353, 789, 1304 |
| TspDTI | ATGAA | 4 cut(s) | 651, 1109, 1284, 1364 |
| TspGWI | ACGGA | 2 cut(s) | 1164, 1169 |
| TspRI | CASTG | 2 cut(s) | 588, 1343 |
| VpaK11BI | GGWCC | 4 cut(s) | 142, 170, 618, 1418 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 137 |
| XapI | RAATTY | 1 cut(s) | 556 |
| XceI | RCATGY | 1 cut(s) | 925 |
| XmiI | GTMKAC | 1 cut(s) | 1503 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1125 |
| XspI | CTAG | 5 cut(s) | 96, 606, 653, 861, 1422 |
| ZraI | GACGTC | 1 cut(s) | 367 |