PHD finger family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22760 AT5G22760 AT5G22760 AT5G35210 AT5G35210 |
| fragaria_vesca | FvH4_3g30100 FvH4_3g30100 FvH4_3g30100 FvH4_3g30100 FvH4_3g30100 |
| malus_domestica | MD03G1132800.v1.1 MD11G1155100.v1.1 |
| prunus_persica | Prupe.6G117600_v2.0.a1 |
| pyrus_communis | pycom11g12660 |
| rosa_chinensis | RchiOBHm_Chr5g0055621 |
| rosa_laevigata | RLG00000035000 |
| rosa_multiflora | Rmu_sc0008989.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00024660 |
| rosa_rugosa | Rorug05G0294400 |
| rosa_samantha | Rh5AG363900 Rh5BG375800 Rh5CG398300 Rh5DG389000 |
| rosa_wichuraiana | Rw5G034220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1404 |
| AatII | GACGTC | 1 cut(s) | 966 |
| Acc36I | ACCTGC | 1 cut(s) | 3389 |
| Acc65I | GGTACC | 2 cut(s) | 2343, 3801 |
| AccB1I | GGYRCC | 4 cut(s) | 391, 2343, 3595, 3801 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1588 |
| AccI | GTMKAC | 3 cut(s) | 31, 2533, 3880 |
| AccII | CGCG | 1 cut(s) | 3075 |
| AccIII | TCCGGA | 1 cut(s) | 3580 |
| AciI | CCGC | 7 cut(s) | 712, 1508, 1772, 2315, 2755, 2772, 3815 |
| AclI | AACGTT | 1 cut(s) | 1271 |
| AcoI | YGGCCR | 2 cut(s) | 2081, 4435 |
| AcyI | GRCGYC | 1 cut(s) | 963 |
| AdeI | CACNNNGTG | 1 cut(s) | 3452 |
| AfeI | AGCGCT | 1 cut(s) | 2500 |
| AflII | CTTAAG | 1 cut(s) | 595 |
| AflIII | ACRYGT | 4 cut(s) | 398, 3073, 3795, 4592 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1711 |
| AjiI | CACGTC | 1 cut(s) | 4524 |
| AjnI | CCWGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1002, 1034, 3635, 3667 |
| Alw21I | GWGCWC | 2 cut(s) | 3409, 4523 |
| Alw26I | GTCTC | 6 cut(s) | 504, 730, 1664, 2312, 2888, 4183 |
| Alw44I | GTGCAC | 1 cut(s) | 4519 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1943, 2510, 4583 |
| Ama87I | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| Aor13HI | TCCGGA | 1 cut(s) | 3580 |
| Aor51HI | AGCGCT | 1 cut(s) | 2500 |
| ApaLI | GTGCAC | 1 cut(s) | 4519 |
| ApeKI | GCWGC | 9 cut(s) | 842, 1931, 1940, 1943, 2018, 2180, 2270, 2678, 3482 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4364, 4396 |
| AseI | ATTAAT | 2 cut(s) | 1497, 1905 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3988 |
| Asp718I | GGTACC | 2 cut(s) | 2343, 3801 |
| AspLEI | GCGC | 3 cut(s) | 808, 1840, 2501 |
| AsuHPI | GGTGA | 7 cut(s) | 115, 242, 909, 1528, 1736, 2735, 3879 |
| AsuII | TTCGAA | 2 cut(s) | 489, 4383 |
| AvaI | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| AvaII | GGWCC | 8 cut(s) | 671, 1064, 1075, 1202, 1811, 2888, 4166, 4580 |
| AxyI | CCTNAGG | 3 cut(s) | 555, 1795, 4497 |
| BaeGI | GKGCMC | 3 cut(s) | 396, 718, 4523 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1553, 1586, 4050, 4083 |
| BalI | TGGCCA | 2 cut(s) | 2083, 4437 |
| BamHI | GGATCC | 2 cut(s) | 1441, 3907 |
| BanI | GGYRCC | 4 cut(s) | 391, 2343, 3595, 3801 |
| BbsI | GAAGAC | 3 cut(s) | 3506, 4212, 4377 |
| Bbv12I | GWGCWC | 2 cut(s) | 3409, 4523 |
| BbvCI | CCTCAGC | 1 cut(s) | 1099 |
| BbvI | GCAGC | 9 cut(s) | 829, 1918, 1927, 1930, 2005, 2192, 2282, 2690, 3494 |
| BceAI | ACGGC | 5 cut(s) | 677, 1336, 2589, 3736, 4671 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2637, 2671 |
| BciT130I | CCWGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| BciVI | GTATCC | 1 cut(s) | 560 |
| BclI | TGATCA | 3 cut(s) | 3090, 3459, 3709 |
| BcoDI | GTCTC | 6 cut(s) | 504, 730, 1664, 2312, 2888, 4183 |
| BfaI | CTAG | 7 cut(s) | 24, 120, 309, 1068, 2262, 2922, 3218 |
| BfmI | CTRYAG | 4 cut(s) | 921, 2039, 2218, 4697 |
| BfoI | RGCGCY | 1 cut(s) | 2502 |
| BfrI | CTTAAG | 1 cut(s) | 595 |
| BfuAI | ACCTGC | 1 cut(s) | 3389 |
| BfuI | GTATCC | 1 cut(s) | 560 |
| BglII | AGATCT | 2 cut(s) | 122, 1222 |
| BmcAI | AGTACT | 2 cut(s) | 836, 3304 |
| Bme1390I | CCNGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| Bme18I | GGWCC | 8 cut(s) | 671, 1064, 1075, 1202, 1811, 2888, 4166, 4580 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1711 |
| BmeT110I | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| BmgBI | CACGTC | 1 cut(s) | 4524 |
| BmrFI | CCNGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| BmrI | ACTGGG | 4 cut(s) | 210, 1636, 3366, 3444 |
| BmuI | ACTGGG | 4 cut(s) | 210, 1636, 3366, 3444 |
| BpiI | GAAGAC | 3 cut(s) | 3506, 4212, 4377 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 725, 757 |
| BpmI | CTGGAG | 5 cut(s) | 892, 1659, 2487, 3155, 4690 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1099 |
| Bpu14I | TTCGAA | 2 cut(s) | 489, 4383 |
| BpuEI | CTTGAG | 5 cut(s) | 752, 796, 2432, 2627, 3902 |
| BsaAI | YACGTR | 3 cut(s) | 305, 2303, 4653 |
| BsaHI | GRCGYC | 1 cut(s) | 963 |
| BsaI | GGTCTC | 2 cut(s) | 2312, 4183 |
| BsaJI | CCNNGG | 8 cut(s) | 35, 846, 1107, 1144, 1352, 2578, 3310, 4634 |
| BsaWI | WCCGGW | 2 cut(s) | 3580, 3980 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 375, 405, 4663, 4693 |
| Bse118I | RCCGGY | 1 cut(s) | 91 |
| Bse21I | CCTNAGG | 3 cut(s) | 555, 1795, 4497 |
| Bse3DI | GCAATG | 2 cut(s) | 2310, 4515 |
| BseAI | TCCGGA | 1 cut(s) | 3580 |
| BseBI | CCWGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| BseDI | CCNNGG | 8 cut(s) | 35, 846, 1107, 1144, 1352, 2578, 3310, 4634 |
| BseMI | GCAATG | 2 cut(s) | 2310, 4515 |
| BseMII | CTCAG | 9 cut(s) | 450, 546, 759, 1113, 1429, 1649, 1809, 2813, 4511 |
| BseRI | GAGGAG | 7 cut(s) | 492, 572, 733, 2630, 3842, 4201, 4655 |
| BseSI | GKGCMC | 3 cut(s) | 396, 718, 4523 |
| BseXI | GCAGC | 9 cut(s) | 829, 1918, 1927, 1930, 2005, 2192, 2282, 2690, 3494 |
| Bsh1236I | CGCG | 1 cut(s) | 3075 |
| BshNI | GGYRCC | 4 cut(s) | 391, 2343, 3595, 3801 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3409, 4523 |
| BsiHKCI | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| BsiSI | CCGG | 3 cut(s) | 92, 3581, 3981 |
| BslFI | GGGAC | 2 cut(s) | 864, 3245 |
| BsmAI | GTCTC | 6 cut(s) | 504, 730, 1664, 2312, 2888, 4183 |
| BsmFI | GGGAC | 2 cut(s) | 864, 3245 |
| BsmI | GAATGC | 1 cut(s) | 1373 |
| Bso31I | GGTCTC | 2 cut(s) | 2312, 4183 |
| BsoBI | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| Bsp119I | TTCGAA | 2 cut(s) | 489, 4383 |
| Bsp1286I | GDGCHC | 4 cut(s) | 396, 718, 3409, 4523 |
| Bsp13I | TCCGGA | 1 cut(s) | 3580 |
| Bsp1407I | TGTACA | 2 cut(s) | 207, 3782 |
| Bsp19I | CCATGG | 3 cut(s) | 846, 1144, 4634 |
| BspACI | CCGC | 7 cut(s) | 712, 1508, 1772, 2315, 2755, 2772, 3815 |
| BspCNI | CTCAG | 9 cut(s) | 451, 547, 758, 1112, 1428, 1650, 1808, 2812, 4510 |
| BspEI | TCCGGA | 1 cut(s) | 3580 |
| BspFNI | CGCG | 1 cut(s) | 3075 |
| BspHI | TCATGA | 2 cut(s) | 3006, 3064 |
| BspMI | ACCTGC | 1 cut(s) | 3389 |
| BspQI | GCTCTTC | 1 cut(s) | 2814 |
| BspT104I | TTCGAA | 2 cut(s) | 489, 4383 |
| BspT107I | GGYRCC | 4 cut(s) | 391, 2343, 3595, 3801 |
| BspTI | CTTAAG | 1 cut(s) | 595 |
| BspTNI | GGTCTC | 2 cut(s) | 2312, 4183 |
| BsrDI | GCAATG | 2 cut(s) | 2310, 4515 |
| BsrFI | RCCGGY | 1 cut(s) | 91 |
| BsrGI | TGTACA | 2 cut(s) | 207, 3782 |
| BssAI | RCCGGY | 1 cut(s) | 91 |
| BssECI | CCNNGG | 8 cut(s) | 35, 846, 1107, 1144, 1352, 2578, 3310, 4634 |
| BssNAI | GTATAC | 1 cut(s) | 3881 |
| BssNI | GRCGYC | 1 cut(s) | 963 |
| BssT1I | CCWWGG | 7 cut(s) | 35, 846, 1107, 1144, 2578, 3310, 4634 |
| Bst1107I | GTATAC | 1 cut(s) | 3881 |
| Bst2UI | CCWGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| Bst6I | CTCTTC | 3 cut(s) | 80, 132, 2814 |
| BstACI | GRCGYC | 1 cut(s) | 963 |
| BstAFI | CTTAAG | 1 cut(s) | 595 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1940, 2276, 2872, 3306, 3390 |
| BstAUI | TGTACA | 2 cut(s) | 207, 3782 |
| BstBAI | YACGTR | 3 cut(s) | 305, 2303, 4653 |
| BstBI | TTCGAA | 2 cut(s) | 489, 4383 |
| BstC8I | GCNNGC | 7 cut(s) | 714, 797, 2753, 2805, 3073, 4352, 4565 |
| BstDSI | CCRYGG | 4 cut(s) | 846, 1144, 1352, 4634 |
| BstEII | GGTNACC | 1 cut(s) | 3376 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3226 |
| BstFNI | CGCG | 1 cut(s) | 3075 |
| BstH2I | RGCGCY | 1 cut(s) | 2502 |
| BstHHI | GCGC | 3 cut(s) | 808, 1840, 2501 |
| BstMAI | GTCTC | 6 cut(s) | 504, 730, 1664, 2312, 2888, 4183 |
| BstNI | CCWGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| BstPI | GGTNACC | 1 cut(s) | 3376 |
| BstSCI | CCNGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| BstSFI | CTRYAG | 4 cut(s) | 921, 2039, 2218, 4697 |
| BstSLI | GKGCMC | 3 cut(s) | 396, 718, 4523 |
| BstUI | CGCG | 1 cut(s) | 3075 |
| BstV1I | GCAGC | 9 cut(s) | 829, 1918, 1927, 1930, 2005, 2192, 2282, 2690, 3494 |
| BstV2I | GAAGAC | 3 cut(s) | 3506, 4212, 4377 |
| BstX2I | RGATCY | 9 cut(s) | 58, 122, 478, 939, 1222, 1441, 1630, 3738, 3907 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3735, 4445 |
| BstYI | RGATCY | 9 cut(s) | 58, 122, 478, 939, 1222, 1441, 1630, 3738, 3907 |
| BstZ17I | GTATAC | 1 cut(s) | 3881 |
| Bsu36I | CCTNAGG | 3 cut(s) | 555, 1795, 4497 |
| BsuI | GTATCC | 1 cut(s) | 560 |
| BtgI | CCRYGG | 4 cut(s) | 846, 1144, 1352, 4634 |
| BtgZI | GCGATG | 2 cut(s) | 2402, 4458 |
| BtrI | CACGTC | 1 cut(s) | 4524 |
| BtsI | GCAGTG | 2 cut(s) | 1143, 1431 |
| BveI | ACCTGC | 1 cut(s) | 3389 |
| Cac8I | GCNNGC | 7 cut(s) | 714, 797, 2753, 2805, 3073, 4352, 4565 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1943, 2510, 4583 |
| CciI | TCATGA | 2 cut(s) | 3006, 3064 |
| CfoI | GCGC | 3 cut(s) | 808, 1840, 2501 |
| Cfr10I | RCCGGY | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 3503 |
| CsiI | ACCWGGT | 1 cut(s) | 2536 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 399, 434 |
| DraI | TTTAAA | 2 cut(s) | 660, 1888 |
| DraIII | CACNNNGTG | 1 cut(s) | 3452 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1711 |
| EaeI | YGGCCR | 2 cut(s) | 2081, 4435 |
| Eam1104I | CTCTTC | 3 cut(s) | 80, 132, 2814 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1711 |
| EarI | CTCTTC | 3 cut(s) | 80, 132, 2814 |
| Eco130I | CCWWGG | 7 cut(s) | 35, 846, 1107, 1144, 2578, 3310, 4634 |
| Eco31I | GGTCTC | 2 cut(s) | 2312, 4183 |
| Eco32I | GATATC | 1 cut(s) | 1519 |
| Eco47I | GGWCC | 8 cut(s) | 671, 1064, 1075, 1202, 1811, 2888, 4166, 4580 |
| Eco47III | AGCGCT | 1 cut(s) | 2500 |
| Eco81I | CCTNAGG | 3 cut(s) | 555, 1795, 4497 |
| Eco88I | CYCGRG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| Eco91I | GGTNACC | 1 cut(s) | 3376 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3226 |
| EcoO109I | RGGNCCY | 2 cut(s) | 671, 4580 |
| EcoO65I | GGTNACC | 1 cut(s) | 3376 |
| EcoRI | GAATTC | 1 cut(s) | 4379 |
| EcoRII | CCWGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| EcoRV | GATATC | 1 cut(s) | 1519 |
| EcoT14I | CCWWGG | 7 cut(s) | 35, 846, 1107, 1144, 2578, 3310, 4634 |
| EcoT22I | ATGCAT | 4 cut(s) | 1319, 2171, 4254, 4321 |
| ErhI | CCWWGG | 7 cut(s) | 35, 846, 1107, 1144, 2578, 3310, 4634 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 714, 746, 2636, 2668, 4338, 4370 |
| FaqI | GGGAC | 2 cut(s) | 864, 3245 |
| FauI | CCCGC | 2 cut(s) | 705, 2308 |
| FauNDI | CATATG | 2 cut(s) | 2275, 3635 |
| FbaI | TGATCA | 3 cut(s) | 3090, 3459, 3709 |
| FblI | GTMKAC | 3 cut(s) | 31, 2533, 3880 |
| FspBI | CTAG | 7 cut(s) | 24, 120, 309, 1068, 2262, 2922, 3218 |
| GlaI | GCGC | 3 cut(s) | 807, 1839, 2500 |
| GsuI | CTGGAG | 5 cut(s) | 892, 1659, 2487, 3155, 4690 |
| HaeII | RGCGCY | 1 cut(s) | 2502 |
| HapII | CCGG | 3 cut(s) | 92, 3581, 3981 |
| HgaI | GACGC | 1 cut(s) | 3503 |
| HhaI | GCGC | 3 cut(s) | 808, 1840, 2501 |
| Hin1I | GRCGYC | 1 cut(s) | 963 |
| Hin6I | GCGC | 3 cut(s) | 806, 1838, 2499 |
| HinP1I | GCGC | 3 cut(s) | 806, 1838, 2499 |
| HincII | GTYRAC | 1 cut(s) | 3470 |
| HindII | GTYRAC | 1 cut(s) | 3470 |
| HindIII | AAGCTT | 3 cut(s) | 2296, 2370, 3189 |
| HpaII | CCGG | 3 cut(s) | 92, 3581, 3981 |
| HphI | GGTGA | 7 cut(s) | 115, 242, 909, 1528, 1736, 2735, 3879 |
| Hpy99I | CGWCG | 2 cut(s) | 1709, 3879 |
| HpyAV | CCTTC | 9 cut(s) | 306, 337, 537, 743, 1065, 1691, 1867, 2092, 4340 |
| Hsp92I | GRCGYC | 1 cut(s) | 963 |
| HspAI | GCGC | 3 cut(s) | 806, 1838, 2499 |
| Kpn2I | TCCGGA | 1 cut(s) | 3580 |
| KpnI | GGTACC | 2 cut(s) | 2347, 3805 |
| Ksp22I | TGATCA | 3 cut(s) | 3090, 3459, 3709 |
| LguI | GCTCTTC | 1 cut(s) | 2814 |
| LmnI | GCTCC | 9 cut(s) | 653, 792, 1421, 1785, 1835, 2506, 3174, 4288, 4573 |
| Lsp1109I | GCAGC | 9 cut(s) | 829, 1918, 1927, 1930, 2005, 2192, 2282, 2690, 3494 |
| MabI | ACCWGGT | 1 cut(s) | 2536 |
| MaeI | CTAG | 7 cut(s) | 24, 120, 309, 1068, 2262, 2922, 3218 |
| MfeI | CAATTG | 1 cut(s) | 543 |
| MflI | RGATCY | 9 cut(s) | 58, 122, 478, 939, 1222, 1441, 1630, 3738, 3907 |
| MhlI | GDGCHC | 4 cut(s) | 396, 718, 3409, 4523 |
| MlsI | TGGCCA | 2 cut(s) | 2083, 4437 |
| MluI | ACGCGT | 1 cut(s) | 3073 |
| MluNI | TGGCCA | 2 cut(s) | 2083, 4437 |
| MlyI | GAGTC | 7 cut(s) | 732, 1160, 1449, 2344, 3639, 3839, 4016 |
| MmeI | TCCRAC | 3 cut(s) | 666, 1000, 3345 |
| Mox20I | TGGCCA | 2 cut(s) | 2083, 4437 |
| Mph1103I | ATGCAT | 4 cut(s) | 1319, 2171, 4254, 4321 |
| MroI | TCCGGA | 1 cut(s) | 3580 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3988 |
| MscI | TGGCCA | 2 cut(s) | 2083, 4437 |
| MslI | CAYNNNNRTG | 5 cut(s) | 858, 1322, 1509, 3270, 3684 |
| Msp20I | TGGCCA | 2 cut(s) | 2083, 4437 |
| MspA1I | CMGCKG | 2 cut(s) | 1940, 2183 |
| MspCI | CTTAAG | 1 cut(s) | 595 |
| MspI | CCGG | 3 cut(s) | 92, 3581, 3981 |
| MspR9I | CCNGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| MunI | CAATTG | 1 cut(s) | 543 |
| Mva1269I | GAATGC | 1 cut(s) | 1373 |
| MvaI | CCWGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| MvnI | CGCG | 1 cut(s) | 3075 |
| NcoI | CCATGG | 3 cut(s) | 846, 1144, 4634 |
| NdeI | CATATG | 2 cut(s) | 2275, 3635 |
| NmuCI | GTSAC | 5 cut(s) | 915, 1410, 1534, 3320, 3791 |
| NsiI | ATGCAT | 4 cut(s) | 1319, 2171, 4254, 4321 |
| NspV | TTCGAA | 2 cut(s) | 489, 4383 |
| PaeR7I | CTCGAG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| PagI | TCATGA | 2 cut(s) | 3006, 3064 |
| PciI | ACATGT | 3 cut(s) | 398, 3795, 4592 |
| PciSI | GCTCTTC | 1 cut(s) | 2814 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3880 |
| PctI | GAATGC | 1 cut(s) | 1373 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3988 |
| PfeI | GAWTC | 9 cut(s) | 1010, 2980, 3287, 3718, 3989, 3995, 4259, 4476, 4646 |
| PflFI | GACNNNGTC | 1 cut(s) | 3619 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1588 |
| PleI | GAGTC | 7 cut(s) | 732, 1160, 1449, 2343, 3638, 3838, 4016 |
| PpsI | GAGTC | 7 cut(s) | 732, 1160, 1449, 2343, 3638, 3838, 4016 |
| Ppu21I | YACGTR | 3 cut(s) | 305, 2303, 4653 |
| PpuMI | RGGWCCY | 2 cut(s) | 671, 4580 |
| PscI | ACATGT | 3 cut(s) | 398, 3795, 4592 |
| PshBI | ATTAAT | 2 cut(s) | 1497, 1905 |
| PsiI | TTATAA | 1 cut(s) | 1404 |
| Psp1406I | AACGTT | 1 cut(s) | 1271 |
| Psp5II | RGGWCCY | 2 cut(s) | 671, 4580 |
| Psp6I | CCWGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| PspEI | GGTNACC | 1 cut(s) | 3376 |
| PspGI | CCWGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| PspPPI | RGGWCCY | 2 cut(s) | 671, 4580 |
| PspXI | VCTCGAGB | 2 cut(s) | 2068, 3824 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1974, 2006, 3325, 3357 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1943, 2510, 4583 |
| PsuI | RGATCY | 9 cut(s) | 58, 122, 478, 939, 1222, 1441, 1630, 3738, 3907 |
| PsyI | GACNNNGTC | 1 cut(s) | 3619 |
| PvuII | CAGCTG | 2 cut(s) | 1940, 2183 |
| RseI | CAYNNNNRTG | 5 cut(s) | 858, 1322, 1509, 3270, 3684 |
| SapI | GCTCTTC | 1 cut(s) | 2814 |
| ScaI | AGTACT | 2 cut(s) | 836, 3304 |
| SchI | GAGTC | 7 cut(s) | 732, 1160, 1449, 2344, 3639, 3839, 4016 |
| ScrFI | CCNGG | 8 cut(s) | 1559, 1638, 2538, 2561, 2825, 3762, 4164, 4578 |
| SduI | GDGCHC | 4 cut(s) | 396, 718, 3409, 4523 |
| SexAI | ACCWGGT | 1 cut(s) | 2536 |
| SfcI | CTRYAG | 4 cut(s) | 921, 2039, 2218, 4697 |
| Sfr274I | CTCGAG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| SfuI | TTCGAA | 2 cut(s) | 489, 4383 |
| SinI | GGWCC | 8 cut(s) | 671, 1064, 1075, 1202, 1811, 2888, 4166, 4580 |
| SlaI | CTCGAG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 858, 1322, 1509, 3270, 3684 |
| SsiI | CCGC | 7 cut(s) | 712, 1508, 1772, 2315, 2755, 2772, 3815 |
| SspI | AATATT | 3 cut(s) | 908, 1526, 2422 |
| SspMI | CTAG | 7 cut(s) | 24, 120, 309, 1068, 2262, 2922, 3218 |
| StyD4I | CCNGG | 8 cut(s) | 1557, 1636, 2536, 2559, 2823, 3760, 4162, 4576 |
| StyI | CCWWGG | 7 cut(s) | 35, 846, 1107, 1144, 2578, 3310, 4634 |
| TaqII | GACCGA | 1 cut(s) | 4424 |
| TatI | WGTACW | 6 cut(s) | 207, 834, 1865, 3302, 3332, 3782 |
| TauI | GCSGC | 1 cut(s) | 2774 |
| TfiI | GAWTC | 9 cut(s) | 1010, 2980, 3287, 3718, 3989, 3995, 4259, 4476, 4646 |
| TseFI | GTSAC | 5 cut(s) | 915, 1410, 1534, 3320, 3791 |
| TseI | GCWGC | 9 cut(s) | 842, 1931, 1940, 1943, 2018, 2180, 2270, 2678, 3482 |
| Tsp45I | GTSAC | 5 cut(s) | 915, 1410, 1534, 3320, 3791 |
| TspGWI | ACGGA | 4 cut(s) | 2979, 3254, 4226, 4496 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3619 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1588 |
| Vha464I | CTTAAG | 1 cut(s) | 595 |
| VneI | GTGCAC | 1 cut(s) | 4519 |
| VpaK11BI | GGWCC | 8 cut(s) | 671, 1064, 1075, 1202, 1811, 2888, 4166, 4580 |
| VspI | ATTAAT | 2 cut(s) | 1497, 1905 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3226 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 272, 1350 |
| XhoI | CTCGAG | 4 cut(s) | 2068, 2288, 3195, 3824 |
| XmiI | GTMKAC | 3 cut(s) | 31, 2533, 3880 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3988 |
| XspI | CTAG | 7 cut(s) | 24, 120, 309, 1068, 2262, 2922, 3218 |
| ZraI | GACGTC | 1 cut(s) | 964 |
| ZrmI | AGTACT | 2 cut(s) | 836, 3304 |
| Zsp2I | ATGCAT | 4 cut(s) | 1319, 2171, 4254, 4321 |