AT5G25630

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004946
Physical Location & Seq
Forward (+)
8947223 .. 8949741
2519 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G25630.3

Sequence Viewer

Length: 1725 bp
ATGGAAGATGTTAATCAGGAGAAGAAGAAAGTACCTCCAATGTCTGAACCAGAAAGATCCACACCGATTAAGACTACAGGAGGACAGTATCGTTTCTGCAAGTCATGTGTTGAAGGAAGTAGTTGCAGGACAGTGAGGTCAAGAACCAAGCTTATGAACGTTTTGATAGAACGTGGAAGACCTCACGAGGCTCAAACTGTTTTCAAAACATTGGCAGAGACGGGACATAGACCGTCTTTGATCAGTTACACAACTCTTTTAGCTGCAATGACGGTTCAGAAACAGTATGGTTCCATAAGCTCTATAGTCTCTGAGGTGGAACAGAGCGGAACCAAACTTGATTCTATATTCTTCAATGCTGTTATTAACGCTTTCTCTGAGTCCGGTAACATGGAAGATGCGGTGCAAGCTCTGTTGAAAATGAAAGAACTTGGTCTAAATCCGACTACGAGTACTTACAACACTTTGATTAAAGGGTATGGGATTGCAGGTAAGCCTGAGAGATCATCTGAGTTACTGGATCTTATGTTGGAAGAGGGCAACGTCGATGTTGGACCGAATATAAGGACGTTTAATGTGTTGGTGCAAGCCTGGTGCAAGAAGAAGAAGGTGGAGGAGGCGTGGGAAGTGGTGAAGAAGATGGAGGAGTGTGGAGTTAGGCCGGATACGGTGACTTATAACACGATTGCAACTTGTTATGTGCAGAAAGGAGAGACCGTGAGAGCTGAGAGTGAGGTGGTTGAGAAGATGGTTATGAAGGAGAAGGCGAAACCGAACGGAAGAACGTGTGGGATTGTTGTGGGAGGGTATTGCAGAGAAGGGAGAGTGAGAGATGGTTTGAGGTTTGTGCGGAGAATGAAGGAAATGAGAGTGGAAGCGAATCTTGTGGTCTTCAATTCTTTGATCAATGGCTTTGTTGAAGTCATGGACCGTGATGGTATCGATGAGGTTCTTACCTTGATGAAGGAGTGTAACGTGAAGGCAGATGTAATCACGTACAGTACTGTGATGAACGCTTGGAGCTCAGCTGGATACATGGAGAAAGCTGCACAAGTGTTTAAAGAAATGGTTAAAGCAGGAGTCAAACCAGACGCTCACGCGTACAGCATTTTAGCTAAAGGGTACGTTAGAGCAAAAGAGCCAAAGAAAGCAGAGGAGCTTCTTGAGACATTGATAGTTGAATCCAGGCCTAACGTTGTGATCTTCACCACTGTGATTAGCGGGTGGTGTAGCAATGGAAGTATGGATGATGCAATGAGGGTTTTCAACAAGATGTGCAAGTTCGGGGTTTCGCCAAATATAAAGACGTTTGAGACTCTGATGTGGGGTTACCTAGAGGTGAAGCAACCATGGAAAGCAGAAGAAGTTTTGCAGATGATGAGAGGATGTGGTGTAAAGCCTGAGAATTCTACCTTCTTGCTGTTAGCAGAAGCTTGGCGTGTCGCGGGACTCACTGATGAGTCGAACAAAGCTATCAATGCATTGAAATGTAAAGACATAGAGATCGCAAAGTTAGAGAAGCTGTACCAAAAACAGTCCTCTGGTAGTAGTTTTAACCTATTGCAGATTCCAGTCGGGAAACGGGAGCTTCCAACCGCAAAAGCGATGAATCTTTCTGCTTGTAAACTCGGAGCTCGAGTGCCAATCATATGCCAGAAGCAGTCCCAAGCACAGTTTGGGATCAGTGGACAGTTTGTACATTCTTGTACAGTGTTCTTGAGCTGA

Protein Analysis

574

Amino Acids

63.89

Weight (kDa)

8.91

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 50 - 110 8.8e-11 Pentatricopeptide repeat domain
PPR_long PF17177 56 - 188 6.7e-10 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 63 - 109 1.9e-11 PPR repeat family
PPR_1 PF12854 94 - 125 3.6e-06 PPR repeat
PPR PF01535 100 - 129 2.2e-06 PPR repeat
PPR_3 PF13812 131 - 183 1.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 135 - 182 4.3e-14 PPR repeat family
PPR_1 PF12854 135 - 164 2.2e-07 PPR repeat
PPR PF01535 139 - 168 2.5e-06 PPR repeat
PPR_2 PF13041 211 - 255 6.4e-07 PPR repeat family
PPR_long PF17177 225 - 358 3e-08 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 232 - 289 3.6e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 243 - 288 1.3e-06 PPR repeat family
TPR_24 PF23276 265 - 373 2.3e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 267 - 324 8.2e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 274 - 306 1e-05 PPR repeat
PPR_2 PF13041 278 - 325 7e-14 PPR repeat family
PPR PF01535 280 - 310 2.2e-06 PPR repeat
PPR_1 PF12854 345 - 374 9.6e-11 PPR repeat
PPR_3 PF13812 345 - 390 4.4e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 346 - 390 9.3e-14 PPR repeat family
PPR PF01535 349 - 379 6.9e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AasI GACNNNNNNGTC 1 cut(s) 136
Acc36I ACCTGC 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 327
AccII CGCG 2 cut(s) 1100, 1445
AciI CCGC 6 cut(s) 327, 401, 850, 1221, 1445, 1596
AclI AACGTT 2 cut(s) 159, 1194
AclWI GGATC 3 cut(s) 51, 528, 1688
AcsI RAATTY 1 cut(s) 1405
AfaI GTAC 9 cut(s) 33, 454, 998, 1003, 1103, 1124, 1526, 1698, 1708
AflIII ACRYGT 2 cut(s) 785, 1098
AgsI TTSAA 9 cut(s) 113, 205, 355, 418, 895, 920, 1181, 1267, 1486
AjnI CCWGG 2 cut(s) 590, 1184
AleI CACNNNNGTG 1 cut(s) 1211
Alw21I GWGCWC 2 cut(s) 1025, 1636
Alw26I GTCTC 5 cut(s) 212, 313, 707, 1160, 1307
AlwI GGATC 3 cut(s) 51, 528, 1688
Ama87I CYCGRG 1 cut(s) 1635
AoxI GGCC 2 cut(s) 659, 1187
ApeKI GCWGC 2 cut(s) 263, 1046
ApoI RAATTY 1 cut(s) 1405
AspS9I GGNCC 2 cut(s) 554, 928
AsuHPI GGTGA 4 cut(s) 643, 682, 1198, 1351
AvaI CYCGRG 1 cut(s) 1635
AvaII GGWCC 2 cut(s) 554, 928
BanII GRGCYC 2 cut(s) 1025, 1636
BauI CACGAG 1 cut(s) 185
BbsI GAAGAC 2 cut(s) 184, 883
Bbv12I GWGCWC 2 cut(s) 1025, 1636
BbvI GCAGC 2 cut(s) 250, 1033
BccI CCATC 4 cut(s) 634, 742, 827, 929
BciT130I CCWGG 2 cut(s) 592, 1186
BciVI GTATCC 2 cut(s) 658, 1025
BclI TGATCA 2 cut(s) 240, 903
BcoDI GTCTC 5 cut(s) 212, 313, 707, 1160, 1307
BfaI CTAG 1 cut(s) 1334
BfmI CTRYAG 2 cut(s) 75, 303
BfuAI ACCTGC 1 cut(s) 479
BfuI GTATCC 2 cut(s) 658, 1025
BisI GCNGC 2 cut(s) 264, 1047
BlpI GCTNAGC 1 cut(s) 1024
BlsI GCNGC 2 cut(s) 265, 1048
BmcAI AGTACT 2 cut(s) 454, 1003
Bme1390I CCNGG 2 cut(s) 592, 1186
Bme18I GGWCC 2 cut(s) 554, 928
BmeT110I CYCGRG 1 cut(s) 1635
BmgT120I GGNCC 2 cut(s) 554, 928
BmiI GGNNCC 2 cut(s) 292, 331
BmrFI CCNGG 2 cut(s) 592, 1186
BmsI GCATC 2 cut(s) 388, 1240
BpiI GAAGAC 2 cut(s) 184, 883
Bpu1102I GCTNAGC 1 cut(s) 1024
BpuEI CTTGAG 1 cut(s) 1184
Bsa29I ATCGAT 1 cut(s) 942
BsaAI YACGTR 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 12
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 1 cut(s) 1349
BsaWI WCCGGW 1 cut(s) 383
BsaXI ACNNNNNCTCC 6 cut(s) 605, 635, 702, 732, 1623, 1653
Bse1I ACTGG 2 cut(s) 522, 1571
Bse3DI GCAATG 3 cut(s) 273, 1240, 1260
Bse8I GATNNNNATC 1 cut(s) 12
BseBI CCWGG 2 cut(s) 592, 1186
BseCI ATCGAT 1 cut(s) 942
BseDI CCNNGG 1 cut(s) 1349
BseGI GGATG 2 cut(s) 1252, 1391
BseJI GATNNNNATC 1 cut(s) 12
BseMI GCAATG 3 cut(s) 273, 1240, 1260
BseMII CTCAG 7 cut(s) 303, 369, 489, 501, 717, 1038, 1392
BseNI ACTGG 2 cut(s) 522, 1571
BseRI GAGGAG 3 cut(s) 629, 659, 1169
BseXI GCAGC 2 cut(s) 250, 1033
BsgI GTGCAG 2 cut(s) 722, 1032
Bsh1236I CGCG 2 cut(s) 1100, 1445
BshFI GGCC 2 cut(s) 661, 1189
BshVI ATCGAT 1 cut(s) 942
BsiHKAI GWGCWC 2 cut(s) 1025, 1636
BsiHKCI CYCGRG 1 cut(s) 1635
BsiSI CCGG 2 cut(s) 384, 662
BslFI GGGAC 3 cut(s) 237, 1461, 1648
BsmAI GTCTC 5 cut(s) 212, 313, 707, 1160, 1307
BsmBI CGTCTC 1 cut(s) 212
BsmFI GGGAC 3 cut(s) 237, 1461, 1648
BsnI GGCC 2 cut(s) 661, 1189
Bso31I GGTCTC 1 cut(s) 707
BsoBI CYCGRG 1 cut(s) 1635
Bsp1286I GDGCHC 2 cut(s) 1025, 1636
Bsp1407I TGTACA 2 cut(s) 1696, 1706
Bsp143I GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
Bsp1720I GCTNAGC 1 cut(s) 1024
Bsp19I CCATGG 1 cut(s) 1349
BspACI CCGC 6 cut(s) 327, 401, 850, 1221, 1445, 1596
BspANI GGCC 2 cut(s) 661, 1189
BspCNI CTCAG 7 cut(s) 304, 370, 490, 502, 718, 1037, 1393
BspDI ATCGAT 1 cut(s) 942
BspFNI CGCG 2 cut(s) 1100, 1445
BspLI GGNNCC 2 cut(s) 292, 331
BspMI ACCTGC 1 cut(s) 479
BspPI GGATC 3 cut(s) 51, 528, 1688
BspTNI GGTCTC 1 cut(s) 707
BsrBI CCGCTC 1 cut(s) 327
BsrDI GCAATG 3 cut(s) 273, 1240, 1260
BsrGI TGTACA 2 cut(s) 1696, 1706
BsrI ACTGG 2 cut(s) 522, 1571
BssECI CCNNGG 1 cut(s) 1349
BssMI GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
BssSI CACGAG 1 cut(s) 185
BssT1I CCWWGG 1 cut(s) 1349
Bst2BI CACGAG 1 cut(s) 185
Bst2UI CCWGG 2 cut(s) 592, 1186
Bst6I CTCTTC 1 cut(s) 528
BstAUI TGTACA 2 cut(s) 1696, 1706
BstBAI YACGTR 1 cut(s) 996
BstC8I GCNNGC 2 cut(s) 408, 588
BstDEI CTNAG 7 cut(s) 312, 378, 498, 510, 726, 1024, 1401
BstDSI CCRYGG 1 cut(s) 1349
BstEII GGTNACC 1 cut(s) 1328
BstF5I GGATG 2 cut(s) 1252, 1391
BstFNI CGCG 2 cut(s) 1100, 1445
BstKTI GATC 8 cut(s) 59, 243, 506, 523, 906, 1203, 1506, 1683
BstMAI GTCTC 5 cut(s) 212, 313, 707, 1160, 1307
BstMBI GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
BstMWI GCNNNNNNNGC 2 cut(s) 407, 1478
BstNI CCWGG 2 cut(s) 592, 1186
BstPI GGTNACC 1 cut(s) 1328
BstSCI CCNGG 2 cut(s) 590, 1184
BstSFI CTRYAG 2 cut(s) 75, 303
BstUI CGCG 2 cut(s) 1100, 1445
BstV1I GCAGC 2 cut(s) 250, 1033
BstV2I GAAGAC 2 cut(s) 184, 883
BstX2I RGATCY 2 cut(s) 56, 520
BstYI RGATCY 2 cut(s) 56, 520
Bsu15I ATCGAT 1 cut(s) 942
BsuI GTATCC 2 cut(s) 658, 1025
BsuRI GGCC 2 cut(s) 661, 1189
BsuTUI ATCGAT 1 cut(s) 942
BtgI CCRYGG 1 cut(s) 1349
BtgZI GCGATG 1 cut(s) 1619
BtsCI GGATG 2 cut(s) 1252, 1391
BtsIMutI CAGTG 5 cut(s) 138, 1209, 1452, 1690, 1716
BveI ACCTGC 1 cut(s) 479
Cac8I GCNNGC 2 cut(s) 408, 588
Cfr13I GGNCC 2 cut(s) 554, 928
ClaI ATCGAT 1 cut(s) 942
CseI GACGC 1 cut(s) 1100
Csp6I GTAC 9 cut(s) 32, 453, 997, 1002, 1102, 1123, 1525, 1697, 1707
CviAII CATG 5 cut(s) 105, 391, 925, 1036, 1350
CviQI GTAC 9 cut(s) 32, 453, 997, 1002, 1102, 1123, 1525, 1697, 1707
DdeI CTNAG 7 cut(s) 312, 378, 498, 510, 726, 1024, 1401
DpnI GATC 8 cut(s) 58, 242, 505, 522, 905, 1202, 1505, 1682
DpnII GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
DraI TTTAAA 1 cut(s) 1060
DrdI GACNNNNNNGTC 1 cut(s) 136
DseDI GACNNNNNNGTC 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Ecl136II GAGCTC 2 cut(s) 1023, 1634
Eco130I CCWWGG 1 cut(s) 1349
Eco147I AGGCCT 1 cut(s) 1189
Eco24I GRGCYC 2 cut(s) 1025, 1636
Eco31I GGTCTC 1 cut(s) 707
Eco47I GGWCC 2 cut(s) 554, 928
Eco53kI GAGCTC 2 cut(s) 1023, 1634
Eco88I CYCGRG 1 cut(s) 1635
Eco91I GGTNACC 1 cut(s) 1328
EcoICRI GAGCTC 2 cut(s) 1023, 1634
EcoO65I GGTNACC 1 cut(s) 1328
EcoRI GAATTC 1 cut(s) 1405
EcoRII CCWGG 2 cut(s) 590, 1184
EcoT14I CCWWGG 1 cut(s) 1349
EcoT22I ATGCAT 1 cut(s) 1483
EcoT38I GRGCYC 2 cut(s) 1025, 1636
ErhI CCWWGG 1 cut(s) 1349
Esp3I CGTCTC 1 cut(s) 212
FaeI CATG 5 cut(s) 108, 394, 928, 1039, 1353
FalI AAGNNNNNCTT 2 cut(s) 867, 899
FaqI GGGAC 3 cut(s) 237, 1461, 1648
FatI CATG 5 cut(s) 104, 390, 924, 1035, 1349
FauI CCCGC 2 cut(s) 1214, 1438
FauNDI CATATG 1 cut(s) 1649
FbaI TGATCA 2 cut(s) 240, 903
Fnu4HI GCNGC 2 cut(s) 264, 1047
FokI GGATG 2 cut(s) 1259, 1398
FriOI GRGCYC 2 cut(s) 1025, 1636
Fsp4HI GCNGC 2 cut(s) 264, 1047
FspBI CTAG 1 cut(s) 1334
GluI GCNGC 2 cut(s) 264, 1047
HaeIII GGCC 2 cut(s) 661, 1189
HapII CCGG 2 cut(s) 384, 662
HgaI GACGC 1 cut(s) 1100
Hin1II CATG 5 cut(s) 108, 394, 928, 1039, 1353
HindIII AAGCTT 2 cut(s) 149, 1431
HpaII CCGG 2 cut(s) 384, 662
HphI GGTGA 4 cut(s) 643, 682, 1198, 1351
Hpy166II GTNNAC 2 cut(s) 1625, 1688
Hpy188I TCNGA 8 cut(s) 46, 279, 313, 379, 444, 511, 1320, 1631
Hpy188III TCNNGA 6 cut(s) 17, 141, 185, 1163, 1576, 1717
Hpy8I GTNNAC 2 cut(s) 1625, 1688
Hpy99I CGWCG 1 cut(s) 548
HpyAV CCTTC 9 cut(s) 107, 601, 751, 757, 812, 853, 958, 973, 1423
HpyF10VI GCNNNNNNNGC 2 cut(s) 407, 1478
HpyF3I CTNAG 7 cut(s) 312, 378, 498, 510, 726, 1024, 1401
Hsp92II CATG 5 cut(s) 108, 394, 928, 1039, 1353
Ksp22I TGATCA 2 cut(s) 240, 903
Kzo9I GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
LmnI GCTCC 4 cut(s) 1020, 1156, 1585, 1631
Lsp1109I GCAGC 2 cut(s) 250, 1033
LweI GCATC 2 cut(s) 388, 1240
MaeI CTAG 1 cut(s) 1334
MaeIII GTNAC 6 cut(s) 245, 386, 513, 670, 971, 1328
MalI GATC 8 cut(s) 58, 242, 505, 522, 905, 1202, 1505, 1682
MbiI CCGCTC 1 cut(s) 327
MboI GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
MflI RGATCY 2 cut(s) 56, 520
MhlI GDGCHC 2 cut(s) 1025, 1636
MluCI AATT 2 cut(s) 895, 1405
MluI ACGCGT 1 cut(s) 1098
MlyI GAGTC 5 cut(s) 389, 1089, 1309, 1443, 1469
MmeI TCCRAC 4 cut(s) 467, 510, 532, 1616
Mph1103I ATGCAT 1 cut(s) 1483
MseI TTAA 8 cut(s) 12, 69, 366, 471, 573, 1059, 1071, 1554
MslI CAYNNNNRTG 2 cut(s) 1211, 1486
MspA1I CMGCKG 1 cut(s) 1028
MspI CCGG 2 cut(s) 384, 662
MspR9I CCNGG 2 cut(s) 592, 1186
MvaI CCWGG 2 cut(s) 592, 1186
MvnI CGCG 2 cut(s) 1100, 1445
MwoI GCNNNNNNNGC 2 cut(s) 407, 1478
NcoI CCATGG 1 cut(s) 1349
NdeI CATATG 1 cut(s) 1649
NdeII GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
NlaIII CATG 5 cut(s) 108, 394, 928, 1039, 1353
NlaIV GGNNCC 2 cut(s) 292, 331
NmuCI GTSAC 1 cut(s) 670
NsiI ATGCAT 1 cut(s) 1483
OliI CACNNNNGTG 1 cut(s) 1211
PaeR7I CTCGAG 1 cut(s) 1635
PceI AGGCCT 1 cut(s) 1189
PfeI GAWTC 5 cut(s) 341, 880, 1181, 1567, 1609
PkrI GCNGC 2 cut(s) 265, 1048
PleI GAGTC 5 cut(s) 388, 1088, 1309, 1443, 1468
PpsI GAGTC 5 cut(s) 388, 1088, 1309, 1443, 1468
Ppu21I YACGTR 1 cut(s) 996
PsiI TTATAA 1 cut(s) 678
Psp124BI GAGCTC 2 cut(s) 1025, 1636
Psp1406I AACGTT 2 cut(s) 159, 1194
Psp6I CCWGG 2 cut(s) 590, 1184
PspEI GGTNACC 1 cut(s) 1328
PspGI CCWGG 2 cut(s) 590, 1184
PspN4I GGNNCC 2 cut(s) 292, 331
PspPI GGNCC 2 cut(s) 554, 928
PspXI VCTCGAGB 1 cut(s) 1635
PsuI RGATCY 2 cut(s) 56, 520
PvuII CAGCTG 1 cut(s) 1028
RsaI GTAC 9 cut(s) 33, 454, 998, 1003, 1103, 1124, 1526, 1698, 1708
RsaNI GTAC 9 cut(s) 32, 453, 997, 1002, 1102, 1123, 1525, 1697, 1707
RseI CAYNNNNRTG 2 cut(s) 1211, 1486
SacI GAGCTC 2 cut(s) 1025, 1636
SaqAI TTAA 8 cut(s) 12, 69, 366, 471, 573, 1059, 1071, 1554
SatI GCNGC 2 cut(s) 264, 1047
Sau3AI GATC 8 cut(s) 56, 240, 503, 520, 903, 1200, 1503, 1680
Sau96I GGNCC 2 cut(s) 554, 928
ScaI AGTACT 2 cut(s) 454, 1003
SchI GAGTC 5 cut(s) 389, 1089, 1309, 1443, 1469
ScrFI CCNGG 2 cut(s) 592, 1186
SduI GDGCHC 2 cut(s) 1025, 1636
SfaNI GCATC 2 cut(s) 388, 1240
SfcI CTRYAG 2 cut(s) 75, 303
Sfr274I CTCGAG 1 cut(s) 1635
SinI GGWCC 2 cut(s) 554, 928
SlaI CTCGAG 1 cut(s) 1635
SmiMI CAYNNNNRTG 2 cut(s) 1211, 1486
SmlI CTYRAG 3 cut(s) 1163, 1635, 1717
SmoI CTYRAG 3 cut(s) 1163, 1635, 1717
Sse9I AATT 2 cut(s) 895, 1405
SseBI AGGCCT 1 cut(s) 1189
SsiI CCGC 6 cut(s) 327, 401, 850, 1221, 1445, 1596
SspMI CTAG 1 cut(s) 1334
SstI GAGCTC 2 cut(s) 1025, 1636
StuI AGGCCT 1 cut(s) 1189
StyD4I CCNGG 2 cut(s) 590, 1184
StyI CCWWGG 1 cut(s) 1349
TaqI TCGA 4 cut(s) 546, 942, 1463, 1636
TaqII GACCGA 1 cut(s) 571
TasI AATT 2 cut(s) 895, 1405
TatI WGTACW 4 cut(s) 452, 1001, 1696, 1706
TfiI GAWTC 5 cut(s) 341, 880, 1181, 1567, 1609
Tru1I TTAA 8 cut(s) 12, 69, 366, 471, 573, 1059, 1071, 1554
Tru9I TTAA 8 cut(s) 12, 69, 366, 471, 573, 1059, 1071, 1554
TscAI CASTG 5 cut(s) 138, 1216, 1459, 1690, 1716
TseFI GTSAC 1 cut(s) 670
TseI GCWGC 2 cut(s) 263, 1046
Tsp45I GTSAC 1 cut(s) 670
TspDTI ATGAA 7 cut(s) 170, 437, 770, 872, 977, 1025, 1622
TspGWI ACGGA 1 cut(s) 792
TspRI CASTG 5 cut(s) 138, 1216, 1459, 1690, 1716
VpaK11BI GGWCC 2 cut(s) 554, 928
XapI RAATTY 1 cut(s) 1405
XcmI CCANNNNNNNNNTGG 1 cut(s) 1673
XhoI CTCGAG 1 cut(s) 1635
XspI CTAG 1 cut(s) 1334
ZrmI AGTACT 2 cut(s) 454, 1003
Zsp2I ATGCAT 1 cut(s) 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.