RLG00000010863

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0004946
Physical Location & Seq
Reverse (-)
4858228 .. 4860747
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010863

Sequence Viewer

Length: 1833 bp
ATGCTAGTTTTGATATTTTTAACCACACAGGAAATTTATCCGGATGATAAGAATCAATTGCATCTAGATTCAAAGTCATTAGATTCATTGAATCAGCCCCATTGCCTTGTATGCATGAACAAAGAAAGTTGCCGAATTGTGCGTTCAAGAACAAAACTAATGAACACATTAATAGAAAGGGGGAAGCCGCAGGAGGTCCAGTCCATTTTCAATGCTTTAATTGAAGAAGGACACAGACCATCATTGATATCGTACACTACCCTCCTGACTGCTTTGACCATCCAGAAGCACTTCGAGTCCATTCCTTCGGTTATATCACAGGTGGAAGAGAATGGTATGAAGCCTGATTCGATATTTTTCAATGCTGTTATTAATGCTTTTTCTGAAGCTGGGAAAATGGAGGAAGCCATGGACACAGTTCAGAAGATGAAGGAGAGTGGATTGAAACCCACTACTAGCACTTACAATACATTGATCAAAGGGTATGGGATTTCAGGTAAGCCTGAAGAGTCTTTGAAACTGCTTGAGATGATGTCCGGCGAGGAAAATGTGAGACCGAATATAAGGACTTTTAATGTACTAGTCAGAGCATGGTGTAAGAAGAAGAACATTATGGAGGCATGGAATGTGGTGCATAAGATCGTAGCCTCTGGAATGCTACCTGATGCTGTTACTTACAACACATTAGCAACAGCTTATGCTCAAAATGGAGAAACATGTCAGGCCGAAGGTTTGATTGTTGAGATGCAGAACAATAGAGTGCAACCGAATGATAGAACTTGTGGCATCATCATAGGTGGGTATTGTAAAGAAGGTAAACTGAAGGAGGCCTTAAGGTTTATGCACAGGAAAGATCTTGGACTGCGTCCTAACGTTGTTGTCTTTAACTCACTGGTTAAGGGTTTTGTTGACACCATGGATAGAGACGGGGTTGATCAGGTCCTGAAGTTGATGAAAGATTTCGGGGTTAAACCGGATGTTATAACATATAGCACCATCATGAATGCATGGAGCTCAGCAGGATTCATGGAGAAGTGTAGGGAAATCTTTGATGACATGGTGAAGGCTGGCATAAAACCTGATGGGCATGTGTACAGCATTCTTGCTAAAGGTTATGTCCGAAATCAAGAAGTAGAGAAAGCCGAAGAGCTGTTGACAGCCATGATTAAAGCAGGAGTTCATCCAAACGTTGTGATTTTCACGACCATCATGAGTGGATGGTGCAGTTCTGGCAGAATGGAGCATGCAATCAAAGTTTTTGACAAAATGTGTGAATATAGCATTTCTCCCAATTTGAAGACATTTGAGACCCTGATATGGGGATTTGGAGAAGCAAAGCTGCCGTGGAAAGCTGAAGAAATACTCCAGATTATGAAGGAGTTTGGTGTTCAGCCAGAGAAATCTACTGTCTTGCTTGTTGCAGATGCTTGGCGTTCAATAGGATTAACAAAAGAGGCAAATAGGATGCTGGGTGTTCTGAAAACTAAAGAAAAGACCAACCAGGTGAAAACAGAAGAGATGCCCTTTGAGAGCTTGGAGAAAATTTATCAAAAGAAATCTGCTAATGCCTATCAGCCCAATATTCTCCAGATACCACCAGTAGTTACAAATGATCAAAAAGGGCCAGCTTCAGCAACTAGGAAAGGCACAATGATGATGAGAGATGGTGATTTTTCATTAGAGATCTCATCACTTGCTGCAAAATCTATGAATCTGTCTCATACTTGTAAATTTGGGGAAAGATTGCCGATCATATGCCAGAAGCAGTCTCGTGGGCAGCTTGGTGTGTATGGTCAGTTTCCACAGTCATGTACAGTTGTGTTCTTGAACTGA

Protein Analysis

611

Amino Acids

68.49

Weight (kDa)

8.49

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 69 - 127 9e-08 Pentatricopeptide repeat domain
TPR_24 PF23276 103 - 210 2.8e-09 Fungal tetratrico peptide repeats
PPR_2 PF13041 115 - 162 3.4e-14 PPR repeat family
PPR PF01535 120 - 148 4.6e-06 PPR repeat
PPR_3 PF13812 120 - 163 5.6e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 147 - 178 5.8e-07 PPR repeat
PPR_2 PF13041 150 - 200 2.2e-10 PPR repeat family
PPR PF01535 153 - 179 1.8e-06 PPR repeat
PPR_2 PF13041 186 - 234 3.2e-10 PPR repeat family
PPR_3 PF13812 210 - 268 1.8e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 221 - 270 6.4e-11 PPR repeat family
PPR_2 PF13041 260 - 303 4.6e-07 PPR repeat family
PPR_long PF17177 280 - 369 1.9e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 284 - 337 2e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 290 - 336 9.5e-09 PPR repeat family
PPR_2 PF13041 325 - 373 1.1e-11 PPR repeat family
PPR_long PF17177 347 - 423 6.2e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 349 - 405 1.8e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 392 - 423 1.5e-10 PPR repeat
PPR_2 PF13041 395 - 442 2.5e-13 PPR repeat family
PPR PF01535 398 - 426 1e-05 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 983
AccIII TCCGGA 1 cut(s) 40
AciI CCGC 1 cut(s) 188
AclI AACGTT 2 cut(s) 873, 1188
AcsI RAATTY 3 cut(s) 33, 1542, 1730
AcuI CTGAAG 6 cut(s) 405, 525, 842, 965, 1374, 1614
AfaI GTAC 4 cut(s) 254, 579, 1094, 1813
AfiI CCNNNNNNNGG 2 cut(s) 1317, 1318
AflII CTTAAG 1 cut(s) 832
AflIII ACRYGT 1 cut(s) 716
AhlI ACTAGT 1 cut(s) 580
AjnI CCWGG 1 cut(s) 1500
AluBI AGCT 9 cut(s) 389, 695, 1014, 1150, 1339, 1352, 1533, 1628, 1780
AluI AGCT 9 cut(s) 389, 695, 1014, 1150, 1339, 1352, 1533, 1628, 1780
Alw21I GWGCWC 1 cut(s) 1016
Alw26I GTCTC 5 cut(s) 547, 918, 1301, 1722, 1773
AlwNI CAGNNNCTG 1 cut(s) 943
Aor13HI TCCGGA 1 cut(s) 40
AoxI GGCC 3 cut(s) 723, 828, 1622
ApeKI GCWGC 3 cut(s) 1339, 1697, 1777
ApoI RAATTY 3 cut(s) 33, 1542, 1730
AseI ATTAAT 2 cut(s) 170, 372
Asp700I GAANNNNTTC 2 cut(s) 290, 959
AspS9I GGNCC 3 cut(s) 196, 940, 1622
AsuHPI GGTGA 3 cut(s) 1072, 1516, 1679
AvaII GGWCC 2 cut(s) 196, 940
BanII GRGCYC 1 cut(s) 1016
BauI CACGAG 1 cut(s) 1770
BbsI GAAGAC 1 cut(s) 1304
Bbv12I GWGCWC 1 cut(s) 1016
BbvI GCAGC 3 cut(s) 1326, 1684, 1789
BccI CCATC 7 cut(s) 247, 287, 1004, 1076, 1212, 1214, 1658
BceAI ACGGC 1 cut(s) 1327
BciT130I CCWGG 1 cut(s) 1502
BclI TGATCA 3 cut(s) 474, 934, 1612
BcoDI GTCTC 5 cut(s) 547, 918, 1301, 1722, 1773
BcuI ACTAGT 1 cut(s) 580
BfaI CTAG 5 cut(s) 5, 65, 456, 581, 1638
BfrI CTTAAG 1 cut(s) 832
BglII AGATCT 2 cut(s) 853, 1683
BisI GCNGC 4 cut(s) 188, 1340, 1698, 1778
BlpI GCTNAGC 1 cut(s) 1015
BlsI GCNGC 4 cut(s) 189, 1341, 1699, 1779
Bme1390I CCNGG 1 cut(s) 1502
Bme18I GGWCC 2 cut(s) 196, 940
BmgT120I GGNCC 3 cut(s) 196, 940, 1622
BmrFI CCNGG 1 cut(s) 1502
BmsI GCATC 7 cut(s) 70, 655, 735, 795, 1414, 1455, 1509
BpiI GAAGAC 1 cut(s) 1304
BpmI CTGGAG 2 cut(s) 1349, 1571
Bpu1102I GCTNAGC 1 cut(s) 1015
BpuEI CTTGAG 1 cut(s) 545
BsaBI GATNNNNATC 1 cut(s) 51
BsaI GGTCTC 2 cut(s) 547, 1301
BsaJI CCNNGG 3 cut(s) 408, 915, 1343
BsaWI WCCGGW 2 cut(s) 40, 973
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 2 cut(s) 1317, 1318
Bse1I ACTGG 3 cut(s) 199, 897, 1598
Bse3DI GCAATG 1 cut(s) 100
Bse8I GATNNNNATC 1 cut(s) 51
BseAI TCCGGA 1 cut(s) 40
BseBI CCWGG 1 cut(s) 1502
BseDI CCNNGG 3 cut(s) 408, 915, 1343
BseGI GGATG 6 cut(s) 49, 279, 982, 1180, 1223, 1470
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 2 cut(s) 1317, 1318
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 1 cut(s) 1029
BseNI ACTGG 3 cut(s) 199, 897, 1598
BseXI GCAGC 3 cut(s) 1326, 1684, 1789
BseYI CCCAGC 2 cut(s) 389, 1468
BsgI GTGCAG 1 cut(s) 1243
BshFI GGCC 3 cut(s) 725, 830, 1624
BsiHKAI GWGCWC 1 cut(s) 1016
BsiSI CCGG 3 cut(s) 41, 537, 974
BslI CCNNNNNNNGG 2 cut(s) 1317, 1318
BsmAI GTCTC 5 cut(s) 547, 918, 1301, 1722, 1773
BsmBI CGTCTC 1 cut(s) 918
BsmI GAATGC 3 cut(s) 660, 1009, 1098
BsnI GGCC 3 cut(s) 725, 830, 1624
Bso31I GGTCTC 2 cut(s) 547, 1301
Bsp1286I GDGCHC 1 cut(s) 1016
Bsp13I TCCGGA 1 cut(s) 40
Bsp1407I TGTACA 2 cut(s) 1092, 1811
Bsp143I GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
Bsp1720I GCTNAGC 1 cut(s) 1015
Bsp19I CCATGG 2 cut(s) 408, 915
BspACI CCGC 1 cut(s) 188
BspANI GGCC 3 cut(s) 725, 830, 1624
BspCNI CTCAG 1 cut(s) 1028
BspEI TCCGGA 1 cut(s) 40
BspHI TCATGA 2 cut(s) 999, 1209
BspQI GCTCTTC 1 cut(s) 1140
BspTI CTTAAG 1 cut(s) 832
BspTNI GGTCTC 2 cut(s) 547, 1301
BsrDI GCAATG 1 cut(s) 100
BsrGI TGTACA 2 cut(s) 1092, 1811
BsrI ACTGG 3 cut(s) 199, 897, 1598
BssECI CCNNGG 3 cut(s) 408, 915, 1343
BssMI GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
BssSI CACGAG 1 cut(s) 1770
BssT1I CCWWGG 2 cut(s) 408, 915
Bst2BI CACGAG 1 cut(s) 1770
Bst2UI CCWGG 1 cut(s) 1502
Bst4CI ACNGT 4 cut(s) 418, 1408, 1806, 1816
Bst6I CTCTTC 4 cut(s) 321, 501, 1140, 1509
BstAFI CTTAAG 1 cut(s) 832
BstAUI TGTACA 2 cut(s) 1092, 1811
BstC8I GCNNGC 3 cut(s) 1069, 1245, 1626
BstDEI CTNAG 1 cut(s) 1015
BstDSI CCRYGG 3 cut(s) 408, 915, 1343
BstF5I GGATG 6 cut(s) 49, 279, 982, 1180, 1223, 1470
BstKTI GATC 7 cut(s) 477, 642, 856, 937, 1615, 1686, 1752
BstMAI GTCTC 5 cut(s) 547, 918, 1301, 1722, 1773
BstMBI GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
BstMWI GCNNNNNNNGC 2 cut(s) 111, 1230
BstNI CCWGG 1 cut(s) 1502
BstNSI RCATGY 3 cut(s) 720, 1091, 1247
BstSCI CCNGG 1 cut(s) 1500
BstV1I GCAGC 3 cut(s) 1326, 1684, 1789
BstV2I GAAGAC 1 cut(s) 1304
BstX2I RGATCY 2 cut(s) 853, 1683
BstYI RGATCY 2 cut(s) 853, 1683
BsuRI GGCC 3 cut(s) 725, 830, 1624
BtgI CCRYGG 3 cut(s) 408, 915, 1343
BtsCI GGATG 6 cut(s) 49, 279, 982, 1180, 1223, 1470
BtsIMutI CAGTG 1 cut(s) 890
Cac8I GCNNGC 3 cut(s) 1069, 1245, 1626
CaiI CAGNNNCTG 1 cut(s) 943
CciI TCATGA 2 cut(s) 999, 1209
Cfr13I GGNCC 3 cut(s) 196, 940, 1622
CseI GACGC 1 cut(s) 854
CsiI ACCWGGT 1 cut(s) 1500
Csp6I GTAC 4 cut(s) 253, 578, 1093, 1812
CviQI GTAC 4 cut(s) 253, 578, 1093, 1812
DdeI CTNAG 1 cut(s) 1015
DpnI GATC 7 cut(s) 476, 641, 855, 936, 1614, 1685, 1751
DpnII GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
Eam1104I CTCTTC 4 cut(s) 321, 501, 1140, 1509
EarI CTCTTC 4 cut(s) 321, 501, 1140, 1509
Ecl136II GAGCTC 1 cut(s) 1014
Eco130I CCWWGG 2 cut(s) 408, 915
Eco147I AGGCCT 1 cut(s) 830
Eco24I GRGCYC 1 cut(s) 1016
Eco31I GGTCTC 2 cut(s) 547, 1301
Eco32I GATATC 1 cut(s) 249
Eco47I GGWCC 2 cut(s) 196, 940
Eco53kI GAGCTC 1 cut(s) 1014
Eco57I CTGAAG 6 cut(s) 405, 525, 842, 965, 1374, 1614
EcoICRI GAGCTC 1 cut(s) 1014
EcoO109I RGGNCCY 1 cut(s) 940
EcoRII CCWGG 1 cut(s) 1500
EcoRV GATATC 1 cut(s) 249
EcoT14I CCWWGG 2 cut(s) 408, 915
EcoT22I ATGCAT 2 cut(s) 116, 1009
EcoT38I GRGCYC 1 cut(s) 1016
ErhI CCWWGG 2 cut(s) 408, 915
Esp3I CGTCTC 1 cut(s) 918
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FauNDI CATATG 1 cut(s) 1754
FbaI TGATCA 3 cut(s) 474, 934, 1612
Fnu4HI GCNGC 4 cut(s) 188, 1340, 1698, 1778
FokI GGATG 6 cut(s) 56, 266, 989, 1167, 1230, 1477
FriOI GRGCYC 1 cut(s) 1016
Fsp4HI GCNGC 4 cut(s) 188, 1340, 1698, 1778
FspBI CTAG 5 cut(s) 5, 65, 456, 581, 1638
GluI GCNGC 4 cut(s) 188, 1340, 1698, 1778
GsaI CCCAGC 2 cut(s) 393, 1472
GsuI CTGGAG 2 cut(s) 1349, 1571
HaeIII GGCC 3 cut(s) 725, 830, 1624
HapII CCGG 3 cut(s) 41, 537, 974
HgaI GACGC 1 cut(s) 854
HincII GTYRAC 2 cut(s) 910, 1155
HindII GTYRAC 2 cut(s) 910, 1155
HinfI GANTC 9 cut(s) 52, 68, 83, 91, 296, 347, 509, 1023, 1711
HpaII CCGG 3 cut(s) 41, 537, 974
HphI GGTGA 3 cut(s) 1072, 1516, 1679
Hpy166II GTNNAC 5 cut(s) 255, 818, 910, 1093, 1155
Hpy188I TCNGA 5 cut(s) 385, 423, 587, 1121, 1479
Hpy8I GTNNAC 5 cut(s) 255, 818, 910, 1093, 1155
HpyAV CCTTC 8 cut(s) 221, 315, 424, 722, 806, 817, 1057, 1369
HpyCH4III ACNGT 4 cut(s) 418, 1408, 1806, 1816
HpyCH4IV ACGT 2 cut(s) 873, 1188
HpyF10VI GCNNNNNNNGC 2 cut(s) 111, 1230
HpyF3I CTNAG 1 cut(s) 1015
HpySE526I ACGT 2 cut(s) 873, 1188
Kpn2I TCCGGA 1 cut(s) 40
Ksp22I TGATCA 3 cut(s) 474, 934, 1612
Kzo9I GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
LguI GCTCTTC 1 cut(s) 1140
LmnI GCTCC 2 cut(s) 1011, 1240
Lsp1109I GCAGC 3 cut(s) 1326, 1684, 1789
LweI GCATC 7 cut(s) 70, 655, 735, 795, 1414, 1455, 1509
MabI ACCWGGT 1 cut(s) 1500
MaeI CTAG 5 cut(s) 5, 65, 456, 581, 1638
MaeII ACGT 2 cut(s) 873, 1188
MaeIII GTNAC 2 cut(s) 670, 1603
MalI GATC 7 cut(s) 476, 641, 855, 936, 1614, 1685, 1751
MboI GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
MfeI CAATTG 1 cut(s) 56
MflI RGATCY 2 cut(s) 853, 1683
MhlI GDGCHC 1 cut(s) 1016
MluCI AATT 7 cut(s) 33, 56, 135, 219, 1291, 1542, 1730
MlyI GAGTC 2 cut(s) 305, 518
MnlI CCTC 8 cut(s) 187, 272, 394, 535, 610, 658, 820, 1447
Mph1103I ATGCAT 2 cut(s) 116, 1009
MroI TCCGGA 1 cut(s) 40
MroXI GAANNNNTTC 2 cut(s) 290, 959
MslI CAYNNNNRTG 3 cut(s) 998, 1652, 1807
MspCI CTTAAG 1 cut(s) 832
MspI CCGG 3 cut(s) 41, 537, 974
MspR9I CCNGG 1 cut(s) 1502
MunI CAATTG 1 cut(s) 56
Mva1269I GAATGC 3 cut(s) 660, 1009, 1098
MvaI CCWGG 1 cut(s) 1502
MwoI GCNNNNNNNGC 2 cut(s) 111, 1230
NcoI CCATGG 2 cut(s) 408, 915
NdeI CATATG 1 cut(s) 1754
NdeII GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
NsiI ATGCAT 2 cut(s) 116, 1009
NspI RCATGY 3 cut(s) 720, 1091, 1247
PaeI GCATGC 1 cut(s) 1247
PagI TCATGA 2 cut(s) 999, 1209
PceI AGGCCT 1 cut(s) 830
PciI ACATGT 1 cut(s) 716
PciSI GCTCTTC 1 cut(s) 1140
PctI GAATGC 3 cut(s) 660, 1009, 1098
PdmI GAANNNNTTC 2 cut(s) 290, 959
PfeI GAWTC 7 cut(s) 52, 68, 83, 91, 347, 1023, 1711
PflFI GACNNNGTC 1 cut(s) 864
PkrI GCNGC 4 cut(s) 189, 1341, 1699, 1779
PleI GAGTC 2 cut(s) 304, 517
PpsI GAGTC 2 cut(s) 304, 517
PpuMI RGGWCCY 1 cut(s) 940
PscI ACATGT 1 cut(s) 716
PshBI ATTAAT 2 cut(s) 170, 372
PsiI TTATAA 1 cut(s) 983
Psp124BI GAGCTC 1 cut(s) 1016
Psp1406I AACGTT 2 cut(s) 873, 1188
Psp5II RGGWCCY 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 1500
PspFI CCCAGC 2 cut(s) 389, 1468
PspGI CCWGG 1 cut(s) 1500
PspPI GGNCC 3 cut(s) 196, 940, 1622
PspPPI RGGWCCY 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 943
PsuI RGATCY 2 cut(s) 853, 1683
PsyI GACNNNGTC 1 cut(s) 864
RsaI GTAC 4 cut(s) 254, 579, 1094, 1813
RsaNI GTAC 4 cut(s) 253, 578, 1093, 1812
RseI CAYNNNNRTG 3 cut(s) 998, 1652, 1807
SacI GAGCTC 1 cut(s) 1016
SapI GCTCTTC 1 cut(s) 1140
SatI GCNGC 4 cut(s) 188, 1340, 1698, 1778
Sau3AI GATC 7 cut(s) 474, 639, 853, 934, 1612, 1683, 1749
Sau96I GGNCC 3 cut(s) 196, 940, 1622
SchI GAGTC 2 cut(s) 305, 518
ScrFI CCNGG 1 cut(s) 1502
SduI GDGCHC 1 cut(s) 1016
SexAI ACCWGGT 1 cut(s) 1500
SfaNI GCATC 7 cut(s) 70, 655, 735, 795, 1414, 1455, 1509
SinI GGWCC 2 cut(s) 196, 940
SmiMI CAYNNNNRTG 3 cut(s) 998, 1652, 1807
SmlI CTYRAG 2 cut(s) 524, 832
SmoI CTYRAG 2 cut(s) 524, 832
SpeI ACTAGT 1 cut(s) 580
SphI GCATGC 1 cut(s) 1247
Sse9I AATT 7 cut(s) 33, 56, 135, 219, 1291, 1542, 1730
SseBI AGGCCT 1 cut(s) 830
SsiI CCGC 1 cut(s) 188
SspI AATATT 1 cut(s) 1582
SspMI CTAG 5 cut(s) 5, 65, 456, 581, 1638
SstI GAGCTC 1 cut(s) 1016
StuI AGGCCT 1 cut(s) 830
StyD4I CCNGG 1 cut(s) 1500
StyI CCWWGG 2 cut(s) 408, 915
TaaI ACNGT 4 cut(s) 418, 1408, 1806, 1816
TaiI ACGT 2 cut(s) 876, 1191
TaqI TCGA 2 cut(s) 294, 350
TaqII GACCGA 1 cut(s) 571
TasI AATT 7 cut(s) 33, 56, 135, 219, 1291, 1542, 1730
TatI WGTACW 3 cut(s) 577, 1092, 1811
TauI GCSGC 1 cut(s) 190
TfiI GAWTC 7 cut(s) 52, 68, 83, 91, 347, 1023, 1711
TscAI CASTG 1 cut(s) 897
TseI GCWGC 3 cut(s) 1339, 1697, 1777
TspRI CASTG 1 cut(s) 897
Tth111I GACNNNGTC 1 cut(s) 864
Vha464I CTTAAG 1 cut(s) 832
VpaK11BI GGWCC 2 cut(s) 196, 940
VspI ATTAAT 2 cut(s) 170, 372
XapI RAATTY 3 cut(s) 33, 1542, 1730
XbaI TCTAGA 1 cut(s) 64
XceI RCATGY 3 cut(s) 720, 1091, 1247
XmnI GAANNNNTTC 2 cut(s) 290, 959
XspI CTAG 5 cut(s) 5, 65, 456, 581, 1638
Zsp2I ATGCAT 2 cut(s) 116, 1009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.