RchiOBHm_Chr6g0306351

Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65090596 .. 65091025
430 bp
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UTR
Exon/CDS
Intron
PRQ27537

Sequence Viewer

Length: 174 bp
ATGGAAATGGTGTGGAGGCAAGCTGCATGGAGAAGAGTTGTGGGGTTGGCTGTGGCCGCGGGGTTCAATACCCCAGTTGATCGCCCTGGCTCATTTCATACAGAGTGGACTAAACTTGCTCAAAAGAGTTCGGGTGTTGGTGCTCTCAATTGTGCTAGTTCAATTGGCTTGTAA

Protein Analysis

57

Amino Acids

6.12

Weight (kDa)

10.04

Isoelectric Point (pI)

21.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 59
AciI CCGC 2 cut(s) 57, 59
AcoI YGGCCR 1 cut(s) 54
AgsI TTSAA 2 cut(s) 67, 162
AjnI CCWGG 1 cut(s) 85
AluBI AGCT 1 cut(s) 23
AluI AGCT 1 cut(s) 23
Alw21I GWGCWC 1 cut(s) 145
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 1 cut(s) 23
Bbv12I GWGCWC 1 cut(s) 145
BbvI GCAGC 1 cut(s) 10
BciT130I CCWGG 1 cut(s) 87
BfaI CTAG 1 cut(s) 156
BisI GCNGC 2 cut(s) 24, 57
BlsI GCNGC 2 cut(s) 25, 58
Bme1390I CCNGG 1 cut(s) 87
BmrFI CCNGG 1 cut(s) 87
BmrI ACTGGG 1 cut(s) 68
BmuI ACTGGG 1 cut(s) 68
BsaJI CCNNGG 2 cut(s) 57, 85
Bse1I ACTGG 1 cut(s) 74
BseBI CCWGG 1 cut(s) 87
BseDI CCNNGG 2 cut(s) 57, 85
BseNI ACTGG 1 cut(s) 74
BseXI GCAGC 1 cut(s) 10
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 1 cut(s) 56
BsiHKAI GWGCWC 1 cut(s) 145
BsnI GGCC 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 145
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 2 cut(s) 57, 59
BspANI GGCC 1 cut(s) 56
BspFNI CGCG 1 cut(s) 59
BsrI ACTGG 1 cut(s) 74
BssECI CCNNGG 2 cut(s) 57, 85
BssMI GATC 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 87
Bst6I CTCTTC 1 cut(s) 28
BstC8I GCNNGC 1 cut(s) 21
BstDSI CCRYGG 1 cut(s) 57
BstFNI CGCG 1 cut(s) 59
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 1 cut(s) 56
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 1 cut(s) 10
BsuRI GGCC 1 cut(s) 56
BtgI CCRYGG 1 cut(s) 57
Cac8I GCNNGC 1 cut(s) 21
Cfr42I CCGCGG 1 cut(s) 60
CviAII CATG 1 cut(s) 27
CviJI RGCY 5 cut(s) 23, 50, 56, 90, 168
CviKI_1 RGCY 5 cut(s) 23, 50, 56, 90, 168
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
EcoRII CCWGG 1 cut(s) 85
FaeI CATG 1 cut(s) 30
FaiI YATR 2 cut(s) 28, 99
FatI CATG 1 cut(s) 26
FauI CCCGC 1 cut(s) 52
Fnu4HI GCNGC 2 cut(s) 24, 57
Fsp4HI GCNGC 2 cut(s) 24, 57
FspBI CTAG 1 cut(s) 156
GluI GCNGC 2 cut(s) 24, 57
HaeIII GGCC 1 cut(s) 56
Hin1II CATG 1 cut(s) 30
Hpy166II GTNNAC 1 cut(s) 108
Hpy8I GTNNAC 1 cut(s) 108
HpyCH4V TGCA 1 cut(s) 26
HpyF10VI GCNNNNNNNGC 1 cut(s) 56
Hsp92II CATG 1 cut(s) 30
KspI CCGCGG 1 cut(s) 60
Kzo9I GATC 1 cut(s) 79
LpnPI CCDG 3 cut(s) 72, 87, 99
Lsp1109I GCAGC 1 cut(s) 10
MaeI CTAG 1 cut(s) 156
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 1 cut(s) 45
MfeI CAATTG 2 cut(s) 148, 162
MhlI GDGCHC 1 cut(s) 145
MluCI AATT 2 cut(s) 148, 162
MnlI CCTC 1 cut(s) 9
MspA1I CMGCKG 1 cut(s) 59
MspR9I CCNGG 1 cut(s) 87
MunI CAATTG 2 cut(s) 148, 162
MvaI CCWGG 1 cut(s) 87
MvnI CGCG 1 cut(s) 59
MwoI GCNNNNNNNGC 1 cut(s) 56
NdeII GATC 1 cut(s) 79
NlaIII CATG 1 cut(s) 30
PkrI GCNGC 2 cut(s) 25, 58
Psp6I CCWGG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 85
SacII CCGCGG 1 cut(s) 60
SatI GCNGC 2 cut(s) 24, 57
Sau3AI GATC 1 cut(s) 79
ScrFI CCNGG 1 cut(s) 87
SduI GDGCHC 1 cut(s) 145
SetI ASST 1 cut(s) 25
Sfr303I CCGCGG 1 cut(s) 60
SgrBI CCGCGG 1 cut(s) 60
Sse9I AATT 2 cut(s) 148, 162
SsiI CCGC 2 cut(s) 57, 59
SspMI CTAG 1 cut(s) 156
StyD4I CCNGG 1 cut(s) 85
TasI AATT 2 cut(s) 148, 162
TauI GCSGC 1 cut(s) 59
TseI GCWGC 1 cut(s) 23
TspDTI ATGAA 1 cut(s) 86
XspI CTAG 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.