FvH4_2g36130

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0004946
Physical Location & Seq
Reverse (-)
26508133 .. 26511017
2885 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36130.t1

Sequence Viewer

Length: 1899 bp
ATGGGAGAATCGAGGGAAGTGAAGTCTTTTTCTAGAGCAACTAAAACAAGTGAAGAAGCAACTGTTACCAATGGACGTGTTCAATCGCTACCAATCAAGGAAACTTATCAGGATGATAAGAATCGATTGCGTCTAGACTCAAAGTCATTGGATTCATTGAGTCAGCCCCATTGCCTTGTATGCATGAACAGAGATAGTTGCCGAATTGTGCGTTCAAGAACAAAACTAATGAACACTTTAATAGAAAGGGGGAAGCCGCAGGAAGTCCAGTCCATTTTCAATGCTTTGATTGAGGAAGGACACAGACCATCATTGATATCCTACACTACTCTCCTGGCTGCCTTGACCATCCAGAAGCGCTTCGAGTCCATTCCTTCAGTTATATCACAGGTGGAAGAGAATGGTATGAAGCCTGATTCGATATTTTTCAATGCTGTTGTTAATGCTTTTTCTGAAGCTGGGAAAATGGAGGAAGCAATGGATGCGGTTAGGAAGATGAAGGAGAGTGGATTGAAACCCACTACTAGCACTTATAATACATTAATCAAAGGGTATGGGATTTCGGGTAAGCCTGAAGAGTCTTTGAAACTGCTTGAGATGATGTCTGGCGAGGAAAATGTGAGACCGAATATAAGGACTTTTAATGTACTAGTCAGAGCATGGTGTAAGAAGAAGAACATTATGGAGGCATGGAATGTGGTGCATAAGATCGTAGCTTCTGGAATGCAACCCGATGCTGTTACTTACAACACATTAGCAACTGCTTATGCTCAAAATGGAGAGACGTGTCAGGCCGAAGCATTGATTGTTGAGATGCAGAACAATAGAGTGCAACCGAATGATAGAACTTGTGGCATCATCATAGGTGGGTATTGCAAAGAAGGTAAATTGAAGGAGGCCTTAAGGTTTATGCACAGGAAAGATCTTGGACTGCGTCCTAATGTAGTTGTCTTTAATTCACTGGTTAAGGGTTTTGTTGACACCATGGACAAAGATGGGGTTGATCAGGTCCTGAAGTTGATGGAAGAATTCGGGGTTAAACCTGATATCATAACATTTAGCACCATCATGAATGCATGGAGCTCAGCAGGATTCATGGAGAAGTGTAAGGAAGTCTTCGATAACATGGTGAAGGCTGGCATAAAACCTGATGTTCATGTGTACAGCATTCTTGCTAAAGGTTATGTTCGAGCTCAAGAAGTCGAGAAAGCCGAAGAACTGTTGACAGCCATGATTAAAGCAGGAGTCCATCCAAACGTTGTGATTTTCACAACCATCATGAGTGGATGGTGCGGATCTGGCAGAATGGAGCATGCAATCAAAGTTTTTGATAAAATGTGTGAATATAGCATTTCTCCCAACTTGAAGACATTTGAGACCGTGATATGGGGATTTGCAGAAGCAAAGCTGCCGTGGAAAGCTGAAGAAATACTCCAGATCATGAAGGAGTTTGGTGTTCAGCCAGAGAAATCTACTCTCTTGCTTGTTGCAGATGCTTGGCGTTCAATTGGATTAACAAAAGAGGCAAACAGGATACTGGGTGTTCTGAAAACTAAAGTAAAGACCAACCAGGTGAAAACAGAAGAGATGACTTTTGAGAGCTTAGAGAAAATTTATCAAAAGAAATCTGCTAGTGCCTATCAGCCGAACATTCTACAGATACCACCAGTAACAAATGATCAAAAAGGGCCAGCTTCAGCAAATAGGAAAGGCACAATGATGATGAGAGATGGTGATTTTTCATTAGAGGTCTCATCACTTGCTGCAAAATCTATGAATCTATCTCATACTTGTAAATTTGGGGAAAGATTGCCGATCATATGCCAGAAGCAGTCTGGTGGGCAGCTTGGTGTGTATGGTCAGTTTGCACTGTCATGTACAGCTGTGTTCTTGAACTAA

Protein Analysis

633

Amino Acids

70.57

Weight (kDa)

8.86

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 92 - 150 2.4e-06 Pentatricopeptide repeat domain
TPR_24 PF23276 126 - 232 2.1e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 127 - 186 1.1e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 138 - 185 8.7e-13 PPR repeat family
TPR_24 PF23276 155 - 265 2.2e-07 Fungal tetratrico peptide repeats
PPR_long PF17177 165 - 261 2.2e-07 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 170 - 201 6e-07 PPR repeat
PPR_2 PF13041 173 - 223 2.3e-10 PPR repeat family
PPR PF01535 176 - 202 1.9e-06 PPR repeat
PPR_2 PF13041 209 - 257 8.3e-11 PPR repeat family
PPR_3 PF13812 233 - 291 4.4e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 244 - 293 3.7e-11 PPR repeat family
PPR_2 PF13041 283 - 326 4.8e-07 PPR repeat family
PPR_long PF17177 305 - 392 6.9e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 307 - 360 2.8e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 313 - 359 3e-07 PPR repeat family
PPR_2 PF13041 348 - 396 2.7e-11 PPR repeat family
PPR_long PF17177 371 - 446 4.5e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 372 - 428 8.1e-09 Pentatricopeptide repeat domain
PPR_long PF17177 401 - 527 2.3e-06 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 415 - 446 1.8e-09 PPR repeat
PPR_2 PF13041 418 - 466 7.2e-13 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 534
AciI CCGC 3 cut(s) 257, 485, 1293
AclI AACGTT 1 cut(s) 1257
AclWI GGATC 1 cut(s) 1303
AcsI RAATTY 3 cut(s) 1028, 1611, 1796
AcuI CTGAAG 6 cut(s) 360, 474, 594, 1034, 1443, 1680
AfaI GTAC 3 cut(s) 648, 1163, 1879
AfeI AGCGCT 1 cut(s) 359
AfiI CCNNNNNNNGG 1 cut(s) 1386
AflII CTTAAG 1 cut(s) 901
AflIII ACRYGT 2 cut(s) 76, 785
AhdI GACNNNNNGTC 1 cut(s) 142
AhlI ACTAGT 1 cut(s) 649
AjiI CACGTC 2 cut(s) 77, 786
AjnI CCWGG 2 cut(s) 333, 1569
Alw21I GWGCWC 2 cut(s) 1085, 1195
Alw26I GTCTC 4 cut(s) 616, 776, 1370, 1756
AlwI GGATC 1 cut(s) 1303
AlwNI CAGNNNCTG 1 cut(s) 1012
Aor51HI AGCGCT 1 cut(s) 359
AoxI GGCC 3 cut(s) 792, 897, 1688
ApeKI GCWGC 4 cut(s) 338, 1408, 1763, 1843
ApoI RAATTY 3 cut(s) 1028, 1611, 1796
AseI ATTAAT 1 cut(s) 542
Asp700I GAANNNNTTC 1 cut(s) 359
AspLEI GCGC 1 cut(s) 360
AspS9I GGNCC 2 cut(s) 1009, 1688
AsuHPI GGTGA 3 cut(s) 1141, 1585, 1745
AvaII GGWCC 1 cut(s) 1009
BanII GRGCYC 2 cut(s) 1085, 1195
BbsI GAAGAC 2 cut(s) 1108, 1373
Bbv12I GWGCWC 2 cut(s) 1085, 1195
BbvI GCAGC 4 cut(s) 325, 1395, 1750, 1855
BccI CCATC 9 cut(s) 316, 356, 989, 1015, 1073, 1257, 1281, 1283, 1724
BceAI ACGGC 1 cut(s) 1396
BciT130I CCWGG 2 cut(s) 335, 1571
BciVI GTATCC 1 cut(s) 1527
BclI TGATCA 2 cut(s) 1003, 1678
BcoDI GTCTC 4 cut(s) 616, 776, 1370, 1756
BcuI ACTAGT 1 cut(s) 649
BfaI CTAG 5 cut(s) 33, 134, 525, 650, 1632
BfmI CTRYAG 1 cut(s) 1655
BfoI RGCGCY 1 cut(s) 361
BfrI CTTAAG 1 cut(s) 901
BfuI GTATCC 1 cut(s) 1527
BglII AGATCT 1 cut(s) 922
BisI GCNGC 5 cut(s) 257, 339, 1409, 1764, 1844
BlpI GCTNAGC 1 cut(s) 1084
BlsI GCNGC 5 cut(s) 258, 340, 1410, 1765, 1845
Bme1390I CCNGG 2 cut(s) 335, 1571
Bme18I GGWCC 1 cut(s) 1009
BmeRI GACNNNNNGTC 1 cut(s) 142
BmgBI CACGTC 2 cut(s) 77, 786
BmgT120I GGNCC 2 cut(s) 1009, 1688
BmrFI CCNGG 2 cut(s) 335, 1571
BmrI ACTGGG 1 cut(s) 1547
BmsI GCATC 5 cut(s) 472, 724, 804, 864, 1483
BmuI ACTGGG 1 cut(s) 1547
BpiI GAAGAC 2 cut(s) 1108, 1373
BpmI CTGGAG 1 cut(s) 1418
Bpu1102I GCTNAGC 1 cut(s) 1084
BpuEI CTTGAG 2 cut(s) 614, 1179
Bsa29I ATCGAT 1 cut(s) 124
BsaBI GATNNNNATC 1 cut(s) 120
BsaI GGTCTC 3 cut(s) 616, 1370, 1756
BsaJI CCNNGG 2 cut(s) 984, 1412
Bsc4I CCNNNNNNNGG 1 cut(s) 1386
Bse1I ACTGG 4 cut(s) 268, 966, 1542, 1667
Bse3DI GCAATG 2 cut(s) 169, 483
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 2 cut(s) 335, 1571
BseCI ATCGAT 1 cut(s) 124
BseDI CCNNGG 2 cut(s) 984, 1412
BseGI GGATG 5 cut(s) 118, 348, 487, 1249, 1292
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 1386
BseMI GCAATG 2 cut(s) 169, 483
BseMII CTCAG 1 cut(s) 1098
BseNI ACTGG 4 cut(s) 268, 966, 1542, 1667
BseXI GCAGC 4 cut(s) 325, 1395, 1750, 1855
BseYI CCCAGC 1 cut(s) 458
BshFI GGCC 3 cut(s) 794, 899, 1690
BshVI ATCGAT 1 cut(s) 124
BsiHKAI GWGCWC 2 cut(s) 1085, 1195
BslI CCNNNNNNNGG 1 cut(s) 1386
BsmAI GTCTC 4 cut(s) 616, 776, 1370, 1756
BsmBI CGTCTC 1 cut(s) 776
BsmI GAATGC 3 cut(s) 729, 1078, 1167
BsnI GGCC 3 cut(s) 794, 899, 1690
Bso31I GGTCTC 3 cut(s) 616, 1370, 1756
Bsp1286I GDGCHC 2 cut(s) 1085, 1195
Bsp1407I TGTACA 2 cut(s) 1161, 1877
Bsp143I GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
Bsp1720I GCTNAGC 1 cut(s) 1084
Bsp19I CCATGG 1 cut(s) 984
BspACI CCGC 3 cut(s) 257, 485, 1293
BspANI GGCC 3 cut(s) 794, 899, 1690
BspCNI CTCAG 1 cut(s) 1097
BspDI ATCGAT 1 cut(s) 124
BspHI TCATGA 3 cut(s) 1068, 1278, 1440
BspPI GGATC 1 cut(s) 1303
BspTI CTTAAG 1 cut(s) 901
BspTNI GGTCTC 3 cut(s) 616, 1370, 1756
BsrDI GCAATG 2 cut(s) 169, 483
BsrGI TGTACA 2 cut(s) 1161, 1877
BsrI ACTGG 4 cut(s) 268, 966, 1542, 1667
BssECI CCNNGG 2 cut(s) 984, 1412
BssMI GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
BssT1I CCWWGG 1 cut(s) 984
Bst2UI CCWGG 2 cut(s) 335, 1571
Bst4CI ACNGT 4 cut(s) 64, 1221, 1381, 1872
Bst6I CTCTTC 3 cut(s) 390, 570, 1578
BstAFI CTTAAG 1 cut(s) 901
BstAPI GCANNNNNTGC 1 cut(s) 482
BstAUI TGTACA 2 cut(s) 1161, 1877
BstC8I GCNNGC 3 cut(s) 1138, 1314, 1692
BstDEI CTNAG 2 cut(s) 1084, 1603
BstDSI CCRYGG 2 cut(s) 984, 1412
BstF5I GGATG 5 cut(s) 118, 348, 487, 1249, 1292
BstH2I RGCGCY 1 cut(s) 361
BstHHI GCGC 1 cut(s) 360
BstKTI GATC 7 cut(s) 711, 925, 1006, 1298, 1440, 1681, 1818
BstMAI GTCTC 4 cut(s) 616, 776, 1370, 1756
BstMBI GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
BstMWI GCNNNNNNNGC 3 cut(s) 180, 482, 1299
BstNI CCWGG 2 cut(s) 335, 1571
BstNSI RCATGY 1 cut(s) 1316
BstSCI CCNGG 2 cut(s) 333, 1569
BstSFI CTRYAG 1 cut(s) 1655
BstV1I GCAGC 4 cut(s) 325, 1395, 1750, 1855
BstV2I GAAGAC 2 cut(s) 1108, 1373
BstX2I RGATCY 2 cut(s) 922, 1295
BstYI RGATCY 2 cut(s) 922, 1295
Bsu15I ATCGAT 1 cut(s) 124
BsuI GTATCC 1 cut(s) 1527
BsuRI GGCC 3 cut(s) 794, 899, 1690
BsuTUI ATCGAT 1 cut(s) 124
BtgI CCRYGG 2 cut(s) 984, 1412
BtrI CACGTC 2 cut(s) 77, 786
BtsCI GGATG 5 cut(s) 118, 348, 487, 1249, 1292
BtsIMutI CAGTG 2 cut(s) 959, 1868
Cac8I GCNNGC 3 cut(s) 1138, 1314, 1692
CaiI CAGNNNCTG 1 cut(s) 1012
CciI TCATGA 3 cut(s) 1068, 1278, 1440
CfoI GCGC 1 cut(s) 360
Cfr13I GGNCC 2 cut(s) 1009, 1688
ClaI ATCGAT 1 cut(s) 124
CseI GACGC 2 cut(s) 119, 923
CsiI ACCWGGT 1 cut(s) 1569
Csp6I GTAC 3 cut(s) 647, 1162, 1878
CviQI GTAC 3 cut(s) 647, 1162, 1878
DdeI CTNAG 2 cut(s) 1084, 1603
DpnI GATC 7 cut(s) 710, 924, 1005, 1297, 1439, 1680, 1817
DpnII GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
DriI GACNNNNNGTC 1 cut(s) 142
Eam1104I CTCTTC 3 cut(s) 390, 570, 1578
Eam1105I GACNNNNNGTC 1 cut(s) 142
EarI CTCTTC 3 cut(s) 390, 570, 1578
Ecl136II GAGCTC 2 cut(s) 1083, 1193
Eco130I CCWWGG 1 cut(s) 984
Eco147I AGGCCT 1 cut(s) 899
Eco24I GRGCYC 2 cut(s) 1085, 1195
Eco31I GGTCTC 3 cut(s) 616, 1370, 1756
Eco32I GATATC 2 cut(s) 318, 1048
Eco47I GGWCC 1 cut(s) 1009
Eco47III AGCGCT 1 cut(s) 359
Eco53kI GAGCTC 2 cut(s) 1083, 1193
Eco57I CTGAAG 6 cut(s) 360, 474, 594, 1034, 1443, 1680
EcoICRI GAGCTC 2 cut(s) 1083, 1193
EcoO109I RGGNCCY 1 cut(s) 1009
EcoRI GAATTC 1 cut(s) 1028
EcoRII CCWGG 2 cut(s) 333, 1569
EcoRV GATATC 2 cut(s) 318, 1048
EcoT14I CCWWGG 1 cut(s) 984
EcoT22I ATGCAT 2 cut(s) 185, 1078
EcoT38I GRGCYC 2 cut(s) 1085, 1195
ErhI CCWWGG 1 cut(s) 984
Esp3I CGTCTC 1 cut(s) 776
FalI AAGNNNNNCTT 4 cut(s) 884, 916, 1100, 1132
FauNDI CATATG 1 cut(s) 1820
FbaI TGATCA 2 cut(s) 1003, 1678
Fnu4HI GCNGC 5 cut(s) 257, 339, 1409, 1764, 1844
FokI GGATG 5 cut(s) 125, 335, 494, 1236, 1299
FriOI GRGCYC 2 cut(s) 1085, 1195
Fsp4HI GCNGC 5 cut(s) 257, 339, 1409, 1764, 1844
FspBI CTAG 5 cut(s) 33, 134, 525, 650, 1632
GlaI GCGC 1 cut(s) 359
GluI GCNGC 5 cut(s) 257, 339, 1409, 1764, 1844
GsaI CCCAGC 1 cut(s) 462
GsuI CTGGAG 1 cut(s) 1418
HaeII RGCGCY 1 cut(s) 361
HaeIII GGCC 3 cut(s) 794, 899, 1690
HgaI GACGC 2 cut(s) 119, 923
HhaI GCGC 1 cut(s) 360
Hin6I GCGC 1 cut(s) 358
HinP1I GCGC 1 cut(s) 358
HincII GTYRAC 2 cut(s) 979, 1224
HindII GTYRAC 2 cut(s) 979, 1224
HphI GGTGA 3 cut(s) 1141, 1585, 1745
Hpy166II GTNNAC 3 cut(s) 979, 1162, 1224
Hpy188I TCNGA 3 cut(s) 454, 656, 1548
Hpy8I GTNNAC 3 cut(s) 979, 1162, 1224
HpyAV CCTTC 7 cut(s) 290, 384, 493, 875, 886, 1126, 1438
HpyCH4III ACNGT 4 cut(s) 64, 1221, 1381, 1872
HpyCH4IV ACGT 3 cut(s) 76, 785, 1257
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 482, 1299
HpyF3I CTNAG 2 cut(s) 1084, 1603
HpySE526I ACGT 3 cut(s) 76, 785, 1257
HspAI GCGC 1 cut(s) 358
Ksp22I TGATCA 2 cut(s) 1003, 1678
Kzo9I GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
LmnI GCTCC 2 cut(s) 1080, 1309
Lsp1109I GCAGC 4 cut(s) 325, 1395, 1750, 1855
LweI GCATC 5 cut(s) 472, 724, 804, 864, 1483
MabI ACCWGGT 1 cut(s) 1569
MaeI CTAG 5 cut(s) 33, 134, 525, 650, 1632
MaeII ACGT 3 cut(s) 76, 785, 1257
MaeIII GTNAC 3 cut(s) 64, 739, 1669
MalI GATC 7 cut(s) 710, 924, 1005, 1297, 1439, 1680, 1817
MboI GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
MfeI CAATTG 1 cut(s) 1506
MflI RGATCY 2 cut(s) 922, 1295
MhlI GDGCHC 2 cut(s) 1085, 1195
MluCI AATT 7 cut(s) 204, 887, 955, 1028, 1506, 1611, 1796
MlyI GAGTC 5 cut(s) 131, 169, 374, 587, 1254
MnlI CCTC 8 cut(s) 6, 286, 463, 604, 679, 889, 1516, 1741
Mph1103I ATGCAT 2 cut(s) 185, 1078
MroXI GAANNNNTTC 1 cut(s) 359
MslI CAYNNNNRTG 3 cut(s) 1067, 1718, 1873
MspA1I CMGCKG 1 cut(s) 1883
MspCI CTTAAG 1 cut(s) 901
MspR9I CCNGG 2 cut(s) 335, 1571
MunI CAATTG 1 cut(s) 1506
Mva1269I GAATGC 3 cut(s) 729, 1078, 1167
MvaI CCWGG 2 cut(s) 335, 1571
MwoI GCNNNNNNNGC 3 cut(s) 180, 482, 1299
NcoI CCATGG 1 cut(s) 984
NdeI CATATG 1 cut(s) 1820
NdeII GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
NsiI ATGCAT 2 cut(s) 185, 1078
NspI RCATGY 1 cut(s) 1316
PaeI GCATGC 1 cut(s) 1316
PagI TCATGA 3 cut(s) 1068, 1278, 1440
PceI AGGCCT 1 cut(s) 899
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PctI GAATGC 3 cut(s) 729, 1078, 1167
PdmI GAANNNNTTC 1 cut(s) 359
PfeI GAWTC 6 cut(s) 8, 121, 152, 416, 1092, 1777
PflFI GACNNNGTC 1 cut(s) 933
PkrI GCNGC 5 cut(s) 258, 340, 1410, 1765, 1845
PleI GAGTC 5 cut(s) 131, 168, 373, 586, 1253
PpsI GAGTC 5 cut(s) 131, 168, 373, 586, 1253
PpuMI RGGWCCY 1 cut(s) 1009
PshBI ATTAAT 1 cut(s) 542
PsiI TTATAA 1 cut(s) 534
Psp124BI GAGCTC 2 cut(s) 1085, 1195
Psp1406I AACGTT 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 1009
Psp6I CCWGG 2 cut(s) 333, 1569
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 2 cut(s) 333, 1569
PspPI GGNCC 2 cut(s) 1009, 1688
PspPPI RGGWCCY 1 cut(s) 1009
PstNI CAGNNNCTG 1 cut(s) 1012
PsuI RGATCY 2 cut(s) 922, 1295
PsyI GACNNNGTC 1 cut(s) 933
PvuII CAGCTG 1 cut(s) 1883
RsaI GTAC 3 cut(s) 648, 1163, 1879
RsaNI GTAC 3 cut(s) 647, 1162, 1878
RseI CAYNNNNRTG 3 cut(s) 1067, 1718, 1873
SacI GAGCTC 2 cut(s) 1085, 1195
SatI GCNGC 5 cut(s) 257, 339, 1409, 1764, 1844
Sau3AI GATC 7 cut(s) 708, 922, 1003, 1295, 1437, 1678, 1815
Sau96I GGNCC 2 cut(s) 1009, 1688
SchI GAGTC 5 cut(s) 131, 169, 374, 587, 1254
ScrFI CCNGG 2 cut(s) 335, 1571
SduI GDGCHC 2 cut(s) 1085, 1195
SexAI ACCWGGT 1 cut(s) 1569
SfaNI GCATC 5 cut(s) 472, 724, 804, 864, 1483
SfcI CTRYAG 1 cut(s) 1655
SinI GGWCC 1 cut(s) 1009
SmiMI CAYNNNNRTG 3 cut(s) 1067, 1718, 1873
SmlI CTYRAG 3 cut(s) 593, 901, 1194
SmoI CTYRAG 3 cut(s) 593, 901, 1194
SpeI ACTAGT 1 cut(s) 649
SphI GCATGC 1 cut(s) 1316
Sse9I AATT 7 cut(s) 204, 887, 955, 1028, 1506, 1611, 1796
SseBI AGGCCT 1 cut(s) 899
SsiI CCGC 3 cut(s) 257, 485, 1293
SspMI CTAG 5 cut(s) 33, 134, 525, 650, 1632
SstI GAGCTC 2 cut(s) 1085, 1195
StuI AGGCCT 1 cut(s) 899
StyD4I CCNGG 2 cut(s) 333, 1569
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 4 cut(s) 64, 1221, 1381, 1872
TaiI ACGT 3 cut(s) 79, 788, 1260
TaqI TCGA 7 cut(s) 11, 124, 363, 419, 1119, 1189, 1203
TaqII GACCGA 1 cut(s) 640
TasI AATT 7 cut(s) 204, 887, 955, 1028, 1506, 1611, 1796
TatI WGTACW 3 cut(s) 646, 1161, 1877
TauI GCSGC 1 cut(s) 259
TfiI GAWTC 6 cut(s) 8, 121, 152, 416, 1092, 1777
TscAI CASTG 2 cut(s) 966, 1875
TseI GCWGC 4 cut(s) 338, 1408, 1763, 1843
TspRI CASTG 2 cut(s) 966, 1875
Tth111I GACNNNGTC 1 cut(s) 933
Vha464I CTTAAG 1 cut(s) 901
VpaK11BI GGWCC 1 cut(s) 1009
VspI ATTAAT 1 cut(s) 542
XapI RAATTY 3 cut(s) 1028, 1611, 1796
XbaI TCTAGA 2 cut(s) 32, 133
XceI RCATGY 1 cut(s) 1316
XcmI CCANNNNNNNNNTGG 1 cut(s) 1832
XmnI GAANNNNTTC 1 cut(s) 359
XspI CTAG 5 cut(s) 33, 134, 525, 650, 1632
Zsp2I ATGCAT 2 cut(s) 185, 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.