Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008291

Physical Location & Seq

Genomic Coordinates Forward (+)

14959614 .. 14961620

Gene Structure 2007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G37660.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 867 bp

ATGCCAATGGCAAAACTAAGGAACATCATCAAAACTCTCTCCATCTTCTTCTTTCTCATCGCAGCAACCGCTCCTTCACTCTCCTCTGCCACCTCCGCCACAGACACCTTCGTCTTTGGCGGCTGCTCCCAGCAAAAATTCTCTCCGGCGTCTGCGTATGAGTCAAACCTCAACTCTCTTCTTACTTCTCTAGTTAACTCAGCCACATACTCTTCCTACAACAACTTCACCATCATGGGCTCTTCATCCTCCGACACAGCACGTGGCCTCTTCCAATGCCGCGGTGACCTCTCCATGCCGGACTGCGCCACGTGTGTGGCACGTGCCGTCTCTCAAGTAGGTCCTCTTTGCCCTTTCACTTGTGGTGGAGCCCTCCAGCTAGCTGGCTGCTACATCAAATACGATAACATCAGCTTCCTTGGCCAAGAAGACAAGACCGTTGTCCTAAAGAAGTGTGGATCCTCTGAGGGTTATAATACCGACGGTATCAGCCGGAGAGACGCAGTTCTCACGGAGCTAGTCAATGGCGGAGGGTATTTTCGAGCCGGAGGGTCCGGTGATGTTCAAGGTATGGGACAATGTGTAGGAGATCTAACGGTGTCAGAGTGCCAAGATTGTTTAGGAACGGCCATTGGACGGCTTAAGAATGATTGTGGCACGGCCGTCTTCGGAGACATGTTCTTGGCTAAGTGTTACGCTAGATATTCAACTGATGGTGCACAACATTACGCCAAGTCTCATAATTATAAAACAAACTACGGAGGAGAAAAGACGTTCGCGATCATCATAGGACTACTAGCTGCGGTTGTTCTTCTAATTATCTTCCTTCTTTTCCTCAGAGGCGTTTGCAGTCGCGGAGGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Stress-antifung

Protein Analysis

288

Amino Acids

30.46

Weight (kDa)

8.34

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	42 - 136	1.5e-18	Salt stress response/antifungal
Stress-antifung	PF01657	178 - 237	3.5e-09	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37660 AT5G37660
fragaria_vesca	FvH4_1g30260 FvH4_1g30260
malus_domestica	MD09G1271000.v1.1 MD17G1269100.v1.1
prunus_persica	Prupe.3G017500_v2.0.a1
pyrus_communis	pycom09g18200 pycom17g26780
rosa_chinensis	RchiOBHm_Chr3g0491121 RchiOBHm_Chr3g0491131 RchiOBHm_Chr3g0491141
rosa_laevigata	RLG00000022860 RLG00000022861
rosa_multiflora	Rmu_sc0005038.1_g000032
rosa_roxburghii	Rroxscaffold_6G00393130
rosa_rugosa	Rorug03G0246400
rosa_samantha	Rh3AG296600 Rh3AG296700 Rh3BG332700 Rh3CG329900 Rh3DG330400
rosa_wichuraiana	Rw3G026180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	474, 747
AasI	GACNNNNNNGTC	1 cut(s)	110
AccBSI	CCGCTC	1 cut(s)	71
AccII	CGCG	3 cut(s)	282, 779, 855
AciI	CCGC	8 cut(s)	69, 96, 120, 280, 282, 528, 803, 855
AclWI	GGATC	2 cut(s)	453, 466
AcoI	YGGCCR	3 cut(s)	421, 627, 660
AcsI	RAATTY	1 cut(s)	137
AcvI	CACGTG	3 cut(s)	263, 312, 323
AcyI	GRCGYC	1 cut(s)	149
AfiI	CCNNNNNNNGG	1 cut(s)	636
AflII	CTTAAG	1 cut(s)	641
AflIII	ACRYGT	2 cut(s)	311, 675
AgsI	TTSAA	2 cut(s)	566, 708
AleI	CACNNNNGTG	1 cut(s)	314
AluBI	AGCT	5 cut(s)	379, 383, 414, 517, 800
AluI	AGCT	5 cut(s)	379, 383, 414, 517, 800
Alw21I	GWGCWC	1 cut(s)	721
Alw26I	GTCTC	4 cut(s)	334, 492, 666, 741
Alw44I	GTGCAC	1 cut(s)	717
AlwI	GGATC	2 cut(s)	453, 466
AoxI	GGCC	4 cut(s)	265, 421, 627, 660
ApaLI	GTGCAC	1 cut(s)	717
ApeKI	GCWGC	4 cut(s)	62, 123, 387, 800
ApoI	RAATTY	1 cut(s)	137
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	2 cut(s)	341, 552
AsuHPI	GGTGA	3 cut(s)	220, 296, 569
AsuNHI	GCTAGC	1 cut(s)	379
AvaII	GGWCC	2 cut(s)	341, 552
BaeGI	GKGCMC	1 cut(s)	721
BalI	TGGCCA	1 cut(s)	423
BamHI	GGATCC	1 cut(s)	458
BanII	GRGCYC	2 cut(s)	242, 373
BbrPI	CACGTG	3 cut(s)	263, 312, 323
BbsI	GAAGAC	2 cut(s)	435, 658
Bbv12I	GWGCWC	1 cut(s)	721
BbvI	GCAGC	4 cut(s)	74, 110, 374, 787
BccI	CCATC	3 cut(s)	50, 239, 707
BceAI	ACGGC	5 cut(s)	311, 642, 647, 653, 675
BcoDI	GTCTC	4 cut(s)	334, 492, 666, 741
BfaI	CTAG	5 cut(s)	191, 380, 518, 699, 797
BfrI	CTTAAG	1 cut(s)	641
BglII	AGATCT	1 cut(s)	589
BisI	GCNGC	6 cut(s)	63, 121, 124, 280, 388, 801
BlsI	GCNGC	6 cut(s)	64, 122, 125, 281, 389, 802
Bme18I	GGWCC	2 cut(s)	341, 552
BmgT120I	GGNCC	2 cut(s)	341, 552
BmiI	GGNNCC	3 cut(s)	370, 460, 553
BmtI	GCTAGC	1 cut(s)	383
BoxI	GACNNNNGTC	1 cut(s)	440
BpiI	GAAGAC	2 cut(s)	435, 658
BpmI	CTGGAG	1 cut(s)	359
BpuEI	CTTGAG	1 cut(s)	318
BsaAI	YACGTR	3 cut(s)	263, 312, 323
BsaHI	GRCGYC	1 cut(s)	149
BsaJI	CCNNGG	2 cut(s)	280, 418
BsaWI	WCCGGW	1 cut(s)	554
Bsc4I	CCNNNNNNNGG	1 cut(s)	636
BseDI	CCNNGG	2 cut(s)	280, 418
BseGI	GGATG	1 cut(s)	245
BseLI	CCNNNNNNNGG	1 cut(s)	636
BseMII	CTCAG	3 cut(s)	213, 456, 850
BseRI	GAGGAG	2 cut(s)	73, 777
BseSI	GKGCMC	1 cut(s)	721
BseX3I	CGGCCG	1 cut(s)	660
BseXI	GCAGC	4 cut(s)	74, 110, 374, 787
BseYI	CCCAGC	1 cut(s)	129
Bsh1236I	CGCG	3 cut(s)	282, 779, 855
Bsh1285I	CGRYCG	1 cut(s)	663
BshFI	GGCC	4 cut(s)	267, 423, 629, 662
BsiEI	CGRYCG	1 cut(s)	663
BsiHKAI	GWGCWC	1 cut(s)	721
BsiSI	CCGG	5 cut(s)	146, 299, 493, 546, 555
BslFI	GGGAC	1 cut(s)	588
BslI	CCNNNNNNNGG	1 cut(s)	636
BsmAI	GTCTC	4 cut(s)	334, 492, 666, 741
BsmBI	CGTCTC	2 cut(s)	334, 492
BsmFI	GGGAC	1 cut(s)	588
BsnI	GGCC	4 cut(s)	267, 423, 629, 662
Bsp1286I	GDGCHC	3 cut(s)	242, 373, 721
Bsp143I	GATC	3 cut(s)	458, 589, 780
Bsp68I	TCGCGA	1 cut(s)	779
BspACI	CCGC	8 cut(s)	69, 96, 120, 280, 282, 528, 803, 855
BspANI	GGCC	4 cut(s)	267, 423, 629, 662
BspCNI	CTCAG	3 cut(s)	212, 457, 849
BspFNI	CGCG	3 cut(s)	282, 779, 855
BspLI	GGNNCC	3 cut(s)	370, 460, 553
BspOI	GCTAGC	1 cut(s)	383
BspPI	GGATC	2 cut(s)	453, 466
BspQI	GCTCTTC	1 cut(s)	247
BspTI	CTTAAG	1 cut(s)	641
BsrBI	CCGCTC	1 cut(s)	71
BssECI	CCNNGG	2 cut(s)	280, 418
BssMI	GATC	3 cut(s)	458, 589, 780
BssNI	GRCGYC	1 cut(s)	149
BssT1I	CCWWGG	1 cut(s)	418
Bst4CI	ACNGT	3 cut(s)	439, 485, 598
Bst6I	CTCTTC	4 cut(s)	183, 217, 247, 275
BstACI	GRCGYC	1 cut(s)	149
BstAFI	CTTAAG	1 cut(s)	641
BstBAI	YACGTR	3 cut(s)	263, 312, 323
BstC8I	GCNNGC	2 cut(s)	381, 385
BstDEI	CTNAG	5 cut(s)	17, 199, 465, 687, 836
BstDSI	CCRYGG	1 cut(s)	280
BstEII	GGTNACC	1 cut(s)	284
BstF5I	GGATG	1 cut(s)	245
BstFNI	CGCG	3 cut(s)	282, 779, 855
BstHHI	GCGC	1 cut(s)	308
BstKTI	GATC	3 cut(s)	461, 592, 783
BstMAI	GTCTC	4 cut(s)	334, 492, 666, 741
BstMBI	GATC	3 cut(s)	458, 589, 780
BstMCI	CGRYCG	1 cut(s)	663
BstMWI	GCNNNNNNNGC	3 cut(s)	68, 95, 420
BstNSI	RCATGY	1 cut(s)	679
BstPAI	GACNNNNGTC	1 cut(s)	440
BstPI	GGTNACC	1 cut(s)	284
BstSLI	GKGCMC	1 cut(s)	721
BstUI	CGCG	3 cut(s)	282, 779, 855
BstV1I	GCAGC	4 cut(s)	74, 110, 374, 787
BstV2I	GAAGAC	2 cut(s)	435, 658
BstX2I	RGATCY	2 cut(s)	458, 589
BstXI	CCANNNNNNTGG	2 cut(s)	316, 383
BstYI	RGATCY	2 cut(s)	458, 589
BstZI	CGGCCG	1 cut(s)	660
BsuRI	GGCC	4 cut(s)	267, 423, 629, 662
BtgI	CCRYGG	1 cut(s)	280
BtgZI	GCGATG	1 cut(s)	43
BtsCI	GGATG	1 cut(s)	245
BtuMI	TCGCGA	1 cut(s)	779
Cac8I	GCNNGC	2 cut(s)	381, 385
CfoI	GCGC	1 cut(s)	308
Cfr13I	GGNCC	2 cut(s)	341, 552
Cfr42I	CCGCGG	1 cut(s)	283
CseI	GACGC	2 cut(s)	138, 509
CviAII	CATG	3 cut(s)	235, 295, 676
DdeI	CTNAG	5 cut(s)	17, 199, 465, 687, 836
DpnI	GATC	3 cut(s)	460, 591, 782
DpnII	GATC	3 cut(s)	458, 589, 780
DrdI	GACNNNNNNGTC	1 cut(s)	110
DseDI	GACNNNNNNGTC	1 cut(s)	110
EaeI	YGGCCR	3 cut(s)	421, 627, 660
EagI	CGGCCG	1 cut(s)	660
Eam1104I	CTCTTC	4 cut(s)	183, 217, 247, 275
EarI	CTCTTC	4 cut(s)	183, 217, 247, 275
EciI	GGCGGA	2 cut(s)	85, 543
EclXI	CGGCCG	1 cut(s)	660
Eco130I	CCWWGG	1 cut(s)	418
Eco24I	GRGCYC	2 cut(s)	242, 373
Eco47I	GGWCC	2 cut(s)	341, 552
Eco52I	CGGCCG	1 cut(s)	660
Eco72I	CACGTG	3 cut(s)	263, 312, 323
Eco91I	GGTNACC	1 cut(s)	284
EcoO109I	RGGNCCY	1 cut(s)	341
EcoO65I	GGTNACC	1 cut(s)	284
EcoT14I	CCWWGG	1 cut(s)	418
EcoT38I	GRGCYC	2 cut(s)	242, 373
ErhI	CCWWGG	1 cut(s)	418
Esp3I	CGTCTC	2 cut(s)	334, 492
FaeI	CATG	3 cut(s)	238, 298, 679
FaqI	GGGAC	1 cut(s)	588
FatI	CATG	3 cut(s)	234, 294, 675
Fnu4HI	GCNGC	6 cut(s)	63, 121, 124, 280, 388, 801
FokI	GGATG	1 cut(s)	232
FriOI	GRGCYC	2 cut(s)	242, 373
Fsp4HI	GCNGC	6 cut(s)	63, 121, 124, 280, 388, 801
FspBI	CTAG	5 cut(s)	191, 380, 518, 699, 797
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	6 cut(s)	63, 121, 124, 280, 388, 801
GsaI	CCCAGC	1 cut(s)	133
GsuI	CTGGAG	1 cut(s)	359
HaeIII	GGCC	4 cut(s)	267, 423, 629, 662
HapII	CCGG	5 cut(s)	146, 299, 493, 546, 555
HgaI	GACGC	2 cut(s)	138, 509
HhaI	GCGC	1 cut(s)	308
Hin1I	GRCGYC	1 cut(s)	149
Hin1II	CATG	3 cut(s)	238, 298, 679
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HinfI	GANTC	1 cut(s)	161
HpaI	GTTAAC	1 cut(s)	196
HpaII	CCGG	5 cut(s)	146, 299, 493, 546, 555
HphI	GGTGA	3 cut(s)	220, 296, 569
Hpy166II	GTNNAC	2 cut(s)	196, 719
Hpy188I	TCNGA	5 cut(s)	253, 466, 604, 671, 839
Hpy188III	TCNNGA	1 cut(s)	778
Hpy8I	GTNNAC	2 cut(s)	196, 719
Hpy99I	CGWCG	1 cut(s)	485
HpyAV	CCTTC	3 cut(s)	84, 118, 836
HpyCH4III	ACNGT	3 cut(s)	439, 485, 598
HpyCH4IV	ACGT	4 cut(s)	262, 311, 322, 773
HpyCH4V	TGCA	2 cut(s)	719, 849
HpyF10VI	GCNNNNNNNGC	3 cut(s)	68, 95, 420
HpyF3I	CTNAG	5 cut(s)	17, 199, 465, 687, 836
HpySE526I	ACGT	4 cut(s)	262, 311, 322, 773
Hsp92I	GRCGYC	1 cut(s)	149
Hsp92II	CATG	3 cut(s)	238, 298, 679
HspAI	GCGC	1 cut(s)	306
KspAI	GTTAAC	1 cut(s)	196
KspI	CCGCGG	1 cut(s)	283
Kzo9I	GATC	3 cut(s)	458, 589, 780
LguI	GCTCTTC	1 cut(s)	247
LmnI	GCTCC	4 cut(s)	76, 131, 368, 514
LpnPI	CCDG	8 cut(s)	143, 159, 312, 369, 389, 506, 559, 568
Lsp1109I	GCAGC	4 cut(s)	74, 110, 374, 787
MaeI	CTAG	5 cut(s)	191, 380, 518, 699, 797
MaeII	ACGT	4 cut(s)	262, 311, 322, 773
MaeIII	GTNAC	2 cut(s)	284, 692
MalI	GATC	3 cut(s)	460, 591, 782
MbiI	CCGCTC	1 cut(s)	71
MboI	GATC	3 cut(s)	458, 589, 780
MflI	RGATCY	2 cut(s)	458, 589
MhlI	GDGCHC	3 cut(s)	242, 373, 721
MlsI	TGGCCA	1 cut(s)	423
MluCI	AATT	3 cut(s)	137, 742, 816
MluNI	TGGCCA	1 cut(s)	423
MlyI	GAGTC	1 cut(s)	170
MmeI	TCCRAC	1 cut(s)	276
Mox20I	TGGCCA	1 cut(s)	423
MscI	TGGCCA	1 cut(s)	423
MseI	TTAA	2 cut(s)	195, 642
MslI	CAYNNNNRTG	2 cut(s)	233, 314
Msp20I	TGGCCA	1 cut(s)	423
MspA1I	CMGCKG	1 cut(s)	282
MspCI	CTTAAG	1 cut(s)	641
MspI	CCGG	5 cut(s)	146, 299, 493, 546, 555
MvnI	CGCG	3 cut(s)	282, 779, 855
MwoI	GCNNNNNNNGC	3 cut(s)	68, 95, 420
NdeII	GATC	3 cut(s)	458, 589, 780
NheI	GCTAGC	1 cut(s)	379
NlaIII	CATG	3 cut(s)	238, 298, 679
NlaIV	GGNNCC	3 cut(s)	370, 460, 553
NmuCI	GTSAC	1 cut(s)	284
NruI	TCGCGA	1 cut(s)	779
NspI	RCATGY	1 cut(s)	679
OliI	CACNNNNGTG	1 cut(s)	314
PciI	ACATGT	1 cut(s)	675
PciSI	GCTCTTC	1 cut(s)	247
PkrI	GCNGC	6 cut(s)	64, 122, 125, 281, 389, 802
PleI	GAGTC	1 cut(s)	169
PmaCI	CACGTG	3 cut(s)	263, 312, 323
PmlI	CACGTG	3 cut(s)	263, 312, 323
PpsI	GAGTC	1 cut(s)	169
Ppu21I	YACGTR	3 cut(s)	263, 312, 323
PpuMI	RGGWCCY	1 cut(s)	341
PscI	ACATGT	1 cut(s)	675
PshAI	GACNNNNGTC	1 cut(s)	440
PsiI	TTATAA	2 cut(s)	474, 747
Psp5II	RGGWCCY	1 cut(s)	341
PspCI	CACGTG	3 cut(s)	263, 312, 323
PspEI	GGTNACC	1 cut(s)	284
PspFI	CCCAGC	1 cut(s)	129
PspN4I	GGNNCC	3 cut(s)	370, 460, 553
PspPI	GGNCC	2 cut(s)	341, 552
PspPPI	RGGWCCY	1 cut(s)	341
PsuI	RGATCY	2 cut(s)	458, 589
RruI	TCGCGA	1 cut(s)	779
RseI	CAYNNNNRTG	2 cut(s)	233, 314
SacII	CCGCGG	1 cut(s)	283
SapI	GCTCTTC	1 cut(s)	247
SaqAI	TTAA	2 cut(s)	195, 642
SatI	GCNGC	6 cut(s)	63, 121, 124, 280, 388, 801
Sau3AI	GATC	3 cut(s)	458, 589, 780
Sau96I	GGNCC	2 cut(s)	341, 552
SchI	GAGTC	1 cut(s)	170
SduI	GDGCHC	3 cut(s)	242, 373, 721
Sfr303I	CCGCGG	1 cut(s)	283
SgrBI	CCGCGG	1 cut(s)	283
SinI	GGWCC	2 cut(s)	341, 552
SmiMI	CAYNNNNRTG	2 cut(s)	233, 314
SmlI	CTYRAG	2 cut(s)	333, 641
SmoI	CTYRAG	2 cut(s)	333, 641
Sse9I	AATT	3 cut(s)	137, 742, 816
SsiI	CCGC	8 cut(s)	69, 96, 120, 280, 282, 528, 803, 855
SspMI	CTAG	5 cut(s)	191, 380, 518, 699, 797
StyI	CCWWGG	1 cut(s)	418
TaaI	ACNGT	3 cut(s)	439, 485, 598
TaiI	ACGT	4 cut(s)	265, 314, 325, 776
TaqI	TCGA	1 cut(s)	541
TasI	AATT	3 cut(s)	137, 742, 816
TauI	GCSGC	2 cut(s)	123, 282
Tru1I	TTAA	2 cut(s)	195, 642
Tru9I	TTAA	2 cut(s)	195, 642
TseFI	GTSAC	1 cut(s)	284
TseI	GCWGC	4 cut(s)	62, 123, 387, 800
Tsp45I	GTSAC	1 cut(s)	284
TspDTI	ATGAA	1 cut(s)	234
TspGWI	ACGGA	2 cut(s)	527, 774
Vha464I	CTTAAG	1 cut(s)	641
VneI	GTGCAC	1 cut(s)	717
VpaK11BI	GGWCC	2 cut(s)	341, 552
XapI	RAATTY	1 cut(s)	137
XceI	RCATGY	1 cut(s)	679
XspI	CTAG	5 cut(s)	191, 380, 518, 699, 797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.