Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0008291

Physical Location & Seq

Genomic Coordinates Reverse (-)

23075473 .. 23078639

Gene Structure 3167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0246400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGAAATCACAAGCTGGCCCTAATCCCCAGGAGGACTACAAACTAAAGGACACGAAACCCCAGCTTGGGGAACGATGGCCACATGGAGGAGTTCGTGGTGGAGGAGGGTGGATAAGCAGCGAAAGAGCTACAAGCACTTACGACCTTGTTGAGCAGATGTTCTATCTCTATGTTAGAGTTGTTAAAGCCAAAAATCTTCCAACAAATCCTTTAACAGGAAGCTGTGATCCTTACGTAGAAGTGAAGCTCGGAAATTACAAGGGAAAAACACACCACTTTGAGAAGAGAACAAACCCTGAATGGAAGCAGGTGTTTGCATTCTCAAAGGAGAAGATTCAGTCTTCCATACTTGAAGTATATGTCAGAGAAAAAGACATGGTAGCAAGAGATGACTATATAGGGAAAGTGGTGTTTGACATGCATGAAGTGCCAACTAGAGTTCCACCGGATAGCCCTTTGGCTCCTCAGTGGTATAGATTAGAACACCGGACAAGCGATAGCAAGGTTAGAGGAGAGGTTATGCTTGCAGTTTGGATGGGAACACAGGCTGATGAAGCTTTCCCAGAAGCTTGGCACTCGGATGCTGCTTCAGTTCATGGAGAAGGAGTTTTCAGCATTCGGTCCAAAGTTTACGTTTCACCAAAACTTTGGTATCTCAGAGTCAATGTAATTGAAGCTCAAGATGTGGAGCCGCATGACAAAAGCCAAACACCACAAGCTTTTGTGAAGGTTCATGTTGGAAATCAGACACTCAAGACAAAGTTATGTCCAACTAAAACCCCCAATCCAATGTGGAATGAAGACTTGATCTTCGTAGCAGCAGAGCCTTTCGAAGAACTGCTTGTACTTACGGTTGAAAACAAAGTAAGCTCTGCAAAAGATGAACAAGTGGGGAAAATAAGCCTTCCACTGACCATGTTCGAAAGGCGCTTGGATCACAGGCCAGTCCATTCTCGCTGGTTCACCCTCGAAAGATTTGGTTTTGGTGCATTGGAGGGAGACAAGAGGCATGAGCACAAGTTCTCAACCAGAGTCCATCTAAGAGTCTGCCTTGAGGGTGCTTACCATGTTCTAGATGAATCAACCTTGTACATCAGTGATGTGAGGCCTACTGCTAGGCAGCTATGGAAGCAGCCAATTGGGATTCTTGAAGTGGGGATCTTAAGTGCTCAAGGGCTTCTTCCAATGAAGACCAAGGATGGTAAATCAACAACTGATGCTTACTGTGTAGCCAAGTATGGGCAGAAATGGGTGAGGACCAGAACAATCATCGAAAGCTTCAGTCCGAAATGGAATGAGCAATACACATGGGAGGTCTATGACCCTTGCACCGTGATCACACTAGGAGTTTTCGACAACTGCCACCTGGGTGGAAATGAGAAACCAACTTCTGGCAGTGGAGCTAAAAATGACTCAAGAATTGGCAAGGTAAGAATCCGGTTATCAACTCTTGAAATGGATAGGATTTACACCAACTCCTATCCACTTCTTGTTCTTCACCCATCTGGATTGAAAAAGATGGGGGAACTACAACTAGCAGTAAGGTTTACCTGTCTCTCATTAGCAAATATAATCTACCTCTACGGCCATCCCTTGCTTCCCAAAATGCATTACCTGCATCCATTCACTGTAAACCAGTTAGATAGTCTGAGATATCAGGCAATGAACATTGTAGCTGCGAGACTTGGCAGAGCTGAGCCACCGCTAAGAAAAGAGGTGGTGGAGTACATGCTTGATGTAGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTTTTCAGAATTGTTTCGCTCTTCTCTGGCCTAATCTCCATGAGCAGGTGGCTTGGCGAAGTTCGTCACTGGAAAAACCCAATCACTACAGTTCTAGTTCATGTTCTGTTTGTCCTCCTGATCTGCTACCCAGAATTGATCCTCCCTACGATCTTCCTTTACATGTTTCTCATCGGAATATGGAATTTCCGTTTCCGCCCGAGAGTTCCACCTAGTATGGATACTAAACTTTCATGGGCAGAAGCTGTTCACCCAGATGAAATGGATGAAGAGTTTGACACCTTCCCTACATCGAAGGCCCAAGACGTGGTGCGAATGAGGTATGATAGACTACGAAGTGTTGCAGGAAGAATTCAAACGGTGGTTGGAGACATTGCAACTCAGGGGGAGAGATTCCAGGCAGTGCTCAGTTGGAGAGACCCAAGAGCAAGCAGCTTGTTCGTATTTTTGTGCCTTATTATCGCTGTAGTGCTCTATGTGACACCCTTCAAGATGATTGCTCTGATTTCCGGCATAGTTTGGCTACGCCACCCTAGATTCCGAAGCAAGCTACCTTCAGTGCCCAGCAATTTCTTCAGAAGACTGCCATCTCGTGCTGATAGCATGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Stress-antifung

Protein Analysis

796

Amino Acids

91.47

Weight (kDa)

9.27

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	55 - 160	4.3e-21	C2 domain
C2	PF00168	217 - 323	4.7e-19	C2 domain
C2	PF00168	381 - 496	1.1e-19	C2 domain
PRT_C	PF08372	641 - 796	4.2e-79	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37660 AT5G37660
fragaria_vesca	FvH4_1g30260 FvH4_1g30260
malus_domestica	MD09G1271000.v1.1 MD17G1269100.v1.1
prunus_persica	Prupe.3G017500_v2.0.a1
pyrus_communis	pycom09g18200 pycom17g26780
rosa_chinensis	RchiOBHm_Chr3g0491121 RchiOBHm_Chr3g0491131 RchiOBHm_Chr3g0491141
rosa_laevigata	RLG00000022860 RLG00000022861
rosa_multiflora	Rmu_sc0005038.1_g000032
rosa_roxburghii	Rroxscaffold_6G00393130
rosa_rugosa	Rorug03G0246400
rosa_samantha	Rh3AG296600 Rh3AG296700 Rh3BG332700 Rh3CG329900 Rh3DG330400
rosa_wichuraiana	Rw3G026180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	298, 1815
Acc36I	ACCTGC	3 cut(s)	298, 1623, 1815
AccB7I	CCANNNNNTGG	2 cut(s)	1391, 2086
AciI	CCGC	3 cut(s)	692, 1703, 1975
AclWI	GGATC	4 cut(s)	221, 942, 1166, 1912
AcoI	YGGCCR	2 cut(s)	77, 1585
AcsI	RAATTY	2 cut(s)	1963, 2130
AcuI	CTGAAG	4 cut(s)	573, 1264, 2319, 2338
AfaI	GTAC	3 cut(s)	846, 1091, 1727
AflII	CTTAAG	1 cut(s)	1162
AflIII	ACRYGT	2 cut(s)	1749, 1941
AgsI	TTSAA	8 cut(s)	353, 674, 857, 1151, 1454, 1513, 2135, 2269
AjiI	CACGTC	1 cut(s)	2086
AjnI	CCWGG	3 cut(s)	27, 1365, 2175
AleI	CACNNNNGTG	1 cut(s)	1368
Alw21I	GWGCWC	4 cut(s)	1017, 1171, 2187, 2253
Alw26I	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
AlwI	GGATC	4 cut(s)	221, 942, 1166, 1912
AlwNI	CAGNNNCTG	1 cut(s)	2024
Ama87I	CYCGRG	1 cut(s)	1978
AoxI	GGCC	7 cut(s)	16, 77, 941, 1106, 1585, 1807, 2076
ApeKI	GCWGC	7 cut(s)	117, 584, 818, 1120, 1132, 1676, 2211
ApoI	RAATTY	2 cut(s)	1963, 2130
ArsI	GACNNNNNNTTYG	2 cut(s)	794, 826
Asp700I	GAANNNNTTC	2 cut(s)	1792, 2025
AspLEI	GCGC	1 cut(s)	930
AspS9I	GGNCC	4 cut(s)	17, 621, 1257, 2077
AsuHPI	GGTGA	5 cut(s)	630, 955, 1264, 1490, 2021
AsuII	TTCGAA	2 cut(s)	831, 921
AvaI	CYCGRG	1 cut(s)	1978
AvaII	GGWCC	2 cut(s)	621, 1257
BaeGI	GKGCMC	1 cut(s)	2343
BaeI	ACNNNNGTAYC	2 cut(s)	635, 668
BalI	TGGCCA	1 cut(s)	79
BauI	CACGAG	1 cut(s)	2370
BbsI	GAAGAC	4 cut(s)	333, 807, 1196, 2365
Bbv12I	GWGCWC	4 cut(s)	1017, 1171, 2187, 2253
BbvI	GCAGC	7 cut(s)	129, 571, 830, 1132, 1144, 1663, 2223
BccI	CCATC	8 cut(s)	69, 529, 1044, 1193, 1510, 1513, 1596, 2374
BceAI	ACGGC	1 cut(s)	1600
BcgI	CGANNNNNNTGC	2 cut(s)	2200, 2234
BciT130I	CCWGG	3 cut(s)	29, 1367, 2177
BciVI	GTATCC	1 cut(s)	1993
BclI	TGATCA	1 cut(s)	1335
BcoDI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BfaI	CTAG	8 cut(s)	435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
BfmI	CTRYAG	2 cut(s)	1866, 2244
BfoI	RGCGCY	1 cut(s)	931
BfrI	CTTAAG	1 cut(s)	1162
BfuAI	ACCTGC	3 cut(s)	298, 1623, 1815
BfuI	GTATCC	1 cut(s)	1993
BisI	GCNGC	8 cut(s)	118, 585, 692, 819, 1121, 1133, 1677, 2212
BlpI	GCTNAGC	1 cut(s)	1695
BlsI	GCNGC	8 cut(s)	119, 586, 693, 820, 1122, 1134, 1678, 2213
Bme1390I	CCNGG	3 cut(s)	29, 1367, 2177
Bme18I	GGWCC	2 cut(s)	621, 1257
BmeT110I	CYCGRG	1 cut(s)	1978
BmgBI	CACGTC	1 cut(s)	2086
BmgT120I	GGNCC	4 cut(s)	17, 621, 1257, 2077
BmiI	GGNNCC	2 cut(s)	462, 690
BmrFI	CCNGG	3 cut(s)	29, 1367, 2177
BmsI	GCATC	3 cut(s)	571, 1207, 1627
BpiI	GAAGAC	4 cut(s)	333, 807, 1196, 2365
Bpu1102I	GCTNAGC	1 cut(s)	1695
Bpu14I	TTCGAA	2 cut(s)	831, 921
BpuEI	CTTGAG	5 cut(s)	663, 737, 1073, 1155, 1399
BsaAI	YACGTR	1 cut(s)	235
BsaI	GGTCTC	1 cut(s)	2190
BsaJI	CCNNGG	3 cut(s)	27, 1194, 1366
BsaWI	WCCGGW	3 cut(s)	445, 486, 1437
BsaXI	ACNNNNNCTCC	4 cut(s)	591, 621, 1460, 1490
Bse1I	ACTGG	3 cut(s)	944, 1636, 1853
Bse3DI	GCAATG	2 cut(s)	1668, 2151
BseBI	CCWGG	3 cut(s)	29, 1367, 2177
BseDI	CCNNGG	3 cut(s)	27, 1194, 1366
BseGI	GGATG	6 cut(s)	540, 586, 1204, 1588, 1618, 2050
BseMI	GCAATG	2 cut(s)	1668, 2151
BseMII	CTCAG	6 cut(s)	479, 670, 1640, 1686, 2174, 2200
BseNI	ACTGG	3 cut(s)	944, 1636, 1853
BseRI	GAGGAG	4 cut(s)	102, 117, 453, 525
BseSI	GKGCMC	1 cut(s)	2343
BseXI	GCAGC	7 cut(s)	129, 571, 830, 1132, 1144, 1663, 2223
BseYI	CCCAGC	2 cut(s)	60, 2342
BshFI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 2078
BsiHKAI	GWGCWC	4 cut(s)	1017, 1171, 2187, 2253
BsiHKCI	CYCGRG	1 cut(s)	1978
BsiSI	CCGG	4 cut(s)	446, 487, 1438, 2289
BsmAI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BsmI	GAATGC	2 cut(s)	317, 615
BsnI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 2078
Bso31I	GGTCTC	1 cut(s)	2190
BsoBI	CYCGRG	1 cut(s)	1978
Bsp119I	TTCGAA	2 cut(s)	831, 921
Bsp1286I	GDGCHC	5 cut(s)	1017, 1171, 2187, 2253, 2343
Bsp1407I	TGTACA	1 cut(s)	1089
Bsp143I	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
Bsp1720I	GCTNAGC	1 cut(s)	1695
BspACI	CCGC	3 cut(s)	692, 1703, 1975
BspANI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 2078
BspCNI	CTCAG	6 cut(s)	478, 669, 1641, 1687, 2173, 2199
BspLI	GGNNCC	2 cut(s)	462, 690
BspMI	ACCTGC	3 cut(s)	298, 1623, 1815
BspPI	GGATC	4 cut(s)	221, 942, 1166, 1912
BspQI	GCTCTTC	1 cut(s)	1805
BspT104I	TTCGAA	2 cut(s)	831, 921
BspTI	CTTAAG	1 cut(s)	1162
BspTNI	GGTCTC	1 cut(s)	2190
BsrDI	GCAATG	2 cut(s)	1668, 2151
BsrGI	TGTACA	1 cut(s)	1089
BsrI	ACTGG	3 cut(s)	944, 1636, 1853
BssECI	CCNNGG	3 cut(s)	27, 1194, 1366
BssMI	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
BssSI	CACGAG	1 cut(s)	2370
BssT1I	CCWWGG	1 cut(s)	1194
Bst2BI	CACGAG	1 cut(s)	2370
Bst2UI	CCWGG	3 cut(s)	29, 1367, 2177
Bst4CI	ACNGT	6 cut(s)	853, 1226, 1333, 1630, 1870, 2140
Bst6I	CTCTTC	3 cut(s)	278, 1805, 2043
BstAFI	CTTAAG	1 cut(s)	1162
BstAPI	GCANNNNNTGC	2 cut(s)	427, 1615
BstAUI	TGTACA	1 cut(s)	1089
BstBAI	YACGTR	1 cut(s)	235
BstBI	TTCGAA	2 cut(s)	831, 921
BstC8I	GCNNGC	5 cut(s)	16, 525, 2209, 2327, 2384
BstDEI	CTNAG	8 cut(s)	465, 656, 1040, 1649, 1695, 1706, 2160, 2186
BstENI	CCTNNNNNAGG	1 cut(s)	213
BstF5I	GGATG	6 cut(s)	540, 586, 1204, 1588, 1618, 2050
BstH2I	RGCGCY	1 cut(s)	931
BstHHI	GCGC	1 cut(s)	930
BstKTI	GATC	8 cut(s)	229, 810, 937, 1161, 1338, 1902, 1920, 1932
BstMAI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BstMBI	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
BstMWI	GCNNNNNNNGC	4 cut(s)	427, 554, 1129, 1615
BstNI	CCWGG	3 cut(s)	29, 1367, 2177
BstNSI	RCATGY	5 cut(s)	421, 1732, 1753, 1945, 2386
BstSCI	CCNGG	3 cut(s)	27, 1365, 2175
BstSFI	CTRYAG	2 cut(s)	1866, 2244
BstSLI	GKGCMC	1 cut(s)	2343
BstSNI	TACGTA	1 cut(s)	235
BstV1I	GCAGC	7 cut(s)	129, 571, 830, 1132, 1144, 1663, 2223
BstV2I	GAAGAC	4 cut(s)	333, 807, 1196, 2365
BstX2I	RGATCY	1 cut(s)	1158
BstXI	CCANNNNNNTGG	3 cut(s)	570, 648, 1370
BstYI	RGATCY	1 cut(s)	1158
BsuI	GTATCC	1 cut(s)	1993
BsuRI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 2078
BtrI	CACGTC	1 cut(s)	2086
BtsCI	GGATG	6 cut(s)	540, 586, 1204, 1588, 1618, 2050
BtsI	GCAGTG	2 cut(s)	1402, 2187
BtsIMutI	CAGTG	8 cut(s)	473, 908, 1102, 1402, 1626, 1846, 2187, 2343
BveI	ACCTGC	3 cut(s)	298, 1623, 1815
Cac8I	GCNNGC	5 cut(s)	16, 525, 2209, 2327, 2384
CaiI	CAGNNNCTG	1 cut(s)	2024
CfoI	GCGC	1 cut(s)	930
Cfr13I	GGNCC	4 cut(s)	17, 621, 1257, 2077
Csp6I	GTAC	3 cut(s)	845, 1090, 1726
CviQI	GTAC	3 cut(s)	845, 1090, 1726
DdeI	CTNAG	8 cut(s)	465, 656, 1040, 1649, 1695, 1706, 2160, 2186
DpnI	GATC	8 cut(s)	228, 809, 936, 1160, 1337, 1901, 1919, 1931
DpnII	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
EaeI	YGGCCR	2 cut(s)	77, 1585
Eam1104I	CTCTTC	3 cut(s)	278, 1805, 2043
EarI	CTCTTC	3 cut(s)	278, 1805, 2043
EciI	GGCGGA	1 cut(s)	1964
Eco105I	TACGTA	1 cut(s)	235
Eco130I	CCWWGG	1 cut(s)	1194
Eco147I	AGGCCT	1 cut(s)	1108
Eco31I	GGTCTC	1 cut(s)	2190
Eco32I	GATATC	1 cut(s)	1655
Eco47I	GGWCC	2 cut(s)	621, 1257
Eco57I	CTGAAG	4 cut(s)	573, 1264, 2319, 2338
Eco88I	CYCGRG	1 cut(s)	1978
EcoNI	CCTNNNNNAGG	1 cut(s)	213
EcoRI	GAATTC	1 cut(s)	2130
EcoRII	CCWGG	3 cut(s)	27, 1365, 2175
EcoRV	GATATC	1 cut(s)	1655
EcoT14I	CCWWGG	1 cut(s)	1194
EcoT22I	ATGCAT	2 cut(s)	423, 1611
ErhI	CCWWGG	1 cut(s)	1194
FalI	AAGNNNNNCTT	4 cut(s)	825, 857, 1164, 1196
FbaI	TGATCA	1 cut(s)	1335
Fnu4HI	GCNGC	8 cut(s)	118, 585, 692, 819, 1121, 1133, 1677, 2212
FokI	GGATG	6 cut(s)	547, 593, 1211, 1575, 1605, 2057
Fsp4HI	GCNGC	8 cut(s)	118, 585, 692, 819, 1121, 1133, 1677, 2212
FspBI	CTAG	8 cut(s)	435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
GlaI	GCGC	1 cut(s)	929
GluI	GCNGC	8 cut(s)	118, 585, 692, 819, 1121, 1133, 1677, 2212
GsaI	CCCAGC	2 cut(s)	64, 2346
HaeII	RGCGCY	1 cut(s)	931
HaeIII	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 2078
HapII	CCGG	4 cut(s)	446, 487, 1438, 2289
HhaI	GCGC	1 cut(s)	930
Hin6I	GCGC	1 cut(s)	928
HinP1I	GCGC	1 cut(s)	928
HindIII	AAGCTT	4 cut(s)	555, 567, 717, 1276
HpaII	CCGG	4 cut(s)	446, 487, 1438, 2289
HphI	GGTGA	5 cut(s)	630, 955, 1264, 1490, 2021
Hpy166II	GTNNAC	5 cut(s)	631, 963, 1548, 1633, 2029
Hpy188III	TCNNGA	9 cut(s)	680, 754, 1073, 1148, 1416, 1451, 1506, 1897, 2269
Hpy8I	GTNNAC	5 cut(s)	631, 963, 1548, 1633, 2029
HpyAV	CCTTC	7 cut(s)	596, 721, 914, 2068, 2071, 2275, 2343
HpyCH4III	ACNGT	6 cut(s)	853, 1226, 1333, 1630, 1870, 2140
HpyCH4IV	ACGT	3 cut(s)	234, 633, 2085
HpyF10VI	GCNNNNNNNGC	4 cut(s)	427, 554, 1129, 1615
HpyF3I	CTNAG	8 cut(s)	465, 656, 1040, 1649, 1695, 1706, 2160, 2186
HpySE526I	ACGT	3 cut(s)	234, 633, 2085
HspAI	GCGC	1 cut(s)	928
Ksp22I	TGATCA	1 cut(s)	1335
Kzo9I	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
LguI	GCTCTTC	1 cut(s)	1805
LmnI	GCTCC	4 cut(s)	466, 688, 1400, 1755
Lsp1109I	GCAGC	7 cut(s)	129, 571, 830, 1132, 1144, 1663, 2223
LweI	GCATC	3 cut(s)	571, 1207, 1627
MaeI	CTAG	8 cut(s)	435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
MaeII	ACGT	3 cut(s)	234, 633, 2085
MaeIII	GTNAC	2 cut(s)	1844, 2257
MalI	GATC	8 cut(s)	228, 809, 936, 1160, 1337, 1901, 1919, 1931
MboI	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	1 cut(s)	1158
MhlI	GDGCHC	5 cut(s)	1017, 1171, 2187, 2253, 2343
MlsI	TGGCCA	1 cut(s)	79
MluCI	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
MluNI	TGGCCA	1 cut(s)	79
MlyI	GAGTC	4 cut(s)	669, 1041, 1053, 1406
MmeI	TCCRAC	5 cut(s)	224, 718, 794, 2125, 2171
Mox20I	TGGCCA	1 cut(s)	79
Mph1103I	ATGCAT	2 cut(s)	423, 1611
MroXI	GAANNNNTTC	2 cut(s)	1792, 2025
MscI	TGGCCA	1 cut(s)	79
MseI	TTAA	3 cut(s)	183, 212, 1163
MslI	CAYNNNNRTG	3 cut(s)	579, 1368, 2034
Msp20I	TGGCCA	1 cut(s)	79
MspCI	CTTAAG	1 cut(s)	1162
MspI	CCGG	4 cut(s)	446, 487, 1438, 2289
MspR9I	CCNGG	3 cut(s)	29, 1367, 2177
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	317, 615
MvaI	CCWGG	3 cut(s)	29, 1367, 2177
MwoI	GCNNNNNNNGC	4 cut(s)	427, 554, 1129, 1615
NdeII	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
NlaIV	GGNNCC	2 cut(s)	462, 690
NmuCI	GTSAC	2 cut(s)	1844, 2257
NsiI	ATGCAT	2 cut(s)	423, 1611
NspI	RCATGY	5 cut(s)	421, 1732, 1753, 1945, 2386
NspV	TTCGAA	2 cut(s)	831, 921
OliI	CACNNNNGTG	1 cut(s)	1368
PaeI	GCATGC	1 cut(s)	2386
PaqCI	CACCTGC	2 cut(s)	298, 1815
PceI	AGGCCT	1 cut(s)	1108
PciI	ACATGT	2 cut(s)	1749, 1941
PciSI	GCTCTTC	1 cut(s)	1805
PctI	GAATGC	2 cut(s)	317, 615
PdmI	GAANNNNTTC	2 cut(s)	1792, 2025
PfeI	GAWTC	7 cut(s)	334, 1079, 1144, 1434, 1742, 2172, 2316
PflMI	CCANNNNNTGG	2 cut(s)	1391, 2086
PkrI	GCNGC	8 cut(s)	119, 586, 693, 820, 1122, 1134, 1678, 2213
PleI	GAGTC	4 cut(s)	668, 1040, 1052, 1406
PpsI	GAGTC	4 cut(s)	668, 1040, 1052, 1406
Ppu21I	YACGTR	1 cut(s)	235
PscI	ACATGT	2 cut(s)	1749, 1941
Psp6I	CCWGG	3 cut(s)	27, 1365, 2175
PspFI	CCCAGC	2 cut(s)	60, 2342
PspGI	CCWGG	3 cut(s)	27, 1365, 2175
PspN4I	GGNNCC	2 cut(s)	462, 690
PspPI	GGNCC	4 cut(s)	17, 621, 1257, 2077
PsrI	GAACNNNNNNTAC	2 cut(s)	828, 860
PstNI	CAGNNNCTG	1 cut(s)	2024
PsuI	RGATCY	1 cut(s)	1158
RsaI	GTAC	3 cut(s)	846, 1091, 1727
RsaNI	GTAC	3 cut(s)	845, 1090, 1726
RseI	CAYNNNNRTG	3 cut(s)	579, 1368, 2034
SapI	GCTCTTC	1 cut(s)	1805
SaqAI	TTAA	3 cut(s)	183, 212, 1163
SatI	GCNGC	8 cut(s)	118, 585, 692, 819, 1121, 1133, 1677, 2212
Sau3AI	GATC	8 cut(s)	226, 807, 934, 1158, 1335, 1899, 1917, 1929
Sau96I	GGNCC	4 cut(s)	17, 621, 1257, 2077
SchI	GAGTC	4 cut(s)	669, 1041, 1053, 1406
ScrFI	CCNGG	3 cut(s)	29, 1367, 2177
SduI	GDGCHC	5 cut(s)	1017, 1171, 2187, 2253, 2343
SfaNI	GCATC	3 cut(s)	571, 1207, 1627
SfcI	CTRYAG	2 cut(s)	1866, 2244
SfuI	TTCGAA	2 cut(s)	831, 921
SinI	GGWCC	2 cut(s)	621, 1257
SmiMI	CAYNNNNRTG	3 cut(s)	579, 1368, 2034
SmlI	CTYRAG	6 cut(s)	678, 752, 1052, 1162, 1170, 1414
SmoI	CTYRAG	6 cut(s)	678, 752, 1052, 1162, 1170, 1414
SnaBI	TACGTA	1 cut(s)	235
SphI	GCATGC	1 cut(s)	2386
Sse9I	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
SseBI	AGGCCT	1 cut(s)	1108
SsiI	CCGC	3 cut(s)	692, 1703, 1975
SspMI	CTAG	8 cut(s)	435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
StuI	AGGCCT	1 cut(s)	1108
StyD4I	CCNGG	3 cut(s)	27, 1365, 2175
StyI	CCWWGG	1 cut(s)	1194
TaaI	ACNGT	6 cut(s)	853, 1226, 1333, 1630, 1870, 2140
TaiI	ACGT	3 cut(s)	237, 636, 2088
TaqI	TCGA	6 cut(s)	831, 921, 969, 1272, 1353, 2072
TaqII	GACCGA	1 cut(s)	609
TasI	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
TatI	WGTACW	3 cut(s)	844, 1089, 1725
TauI	GCSGC	1 cut(s)	694
TfiI	GAWTC	7 cut(s)	334, 1079, 1144, 1434, 1742, 2172, 2316
Tru1I	TTAA	3 cut(s)	183, 212, 1163
Tru9I	TTAA	3 cut(s)	183, 212, 1163
TscAI	CASTG	8 cut(s)	473, 915, 1102, 1402, 1633, 1853, 2187, 2343
TseFI	GTSAC	2 cut(s)	1844, 2257
TseI	GCWGC	7 cut(s)	117, 584, 818, 1120, 1132, 1676, 2211
Tsp45I	GTSAC	2 cut(s)	1844, 2257
TspGWI	ACGGA	1 cut(s)	1958
TspRI	CASTG	8 cut(s)	473, 915, 1102, 1402, 1633, 1853, 2187, 2343
Van91I	CCANNNNNTGG	2 cut(s)	1391, 2086
Vha464I	CTTAAG	1 cut(s)	1162
VpaK11BI	GGWCC	2 cut(s)	621, 1257
XagI	CCTNNNNNAGG	1 cut(s)	213
XapI	RAATTY	2 cut(s)	1963, 2130
XbaI	TCTAGA	1 cut(s)	1072
XceI	RCATGY	5 cut(s)	421, 1732, 1753, 1945, 2386
XmnI	GAANNNNTTC	2 cut(s)	1792, 2025
XspI	CTAG	8 cut(s)	435, 1073, 1116, 1343, 1535, 1874, 1992, 2313
Zsp2I	ATGCAT	2 cut(s)	423, 1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.