cop1-interactive protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64330 AT5G41790 AT5G41790 |
| fragaria_vesca | FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 |
| malus_domestica | MD06G1102300.v1.1 MD14G1121500.v1.1 |
| prunus_persica | Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 |
| pyrus_communis | pycom06g09710 |
| rosa_chinensis | RchiOBHm_Chr7g0195431 |
| rosa_laevigata | RLG00000004121 |
| rosa_multiflora | Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00260490 |
| rosa_rugosa | Rorug07G0023200 |
| rosa_samantha | Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700 |
| rosa_wichuraiana | Rw7G012850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 147 |
| Acc36I | ACCTGC | 1 cut(s) | 1339 |
| AccB1I | GGYRCC | 1 cut(s) | 386 |
| AccII | CGCG | 1 cut(s) | 1836 |
| AciI | CCGC | 6 cut(s) | 223, 840, 1619, 1876, 2698, 2702 |
| AclI | AACGTT | 1 cut(s) | 3448 |
| AclWI | GGATC | 5 cut(s) | 901, 1886, 1905, 3514, 4673 |
| AcsI | RAATTY | 4 cut(s) | 194, 1942, 2655, 2670 |
| AcuI | CTGAAG | 6 cut(s) | 413, 1922, 2915, 2931, 3830, 4020 |
| AcyI | GRCGYC | 1 cut(s) | 144 |
| AdeI | CACNNNGTG | 3 cut(s) | 587, 1240, 2233 |
| AfaI | GTAC | 8 cut(s) | 221, 230, 971, 1539, 2451, 2532, 2979, 4239 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2446 |
| AflIII | ACRYGT | 1 cut(s) | 2196 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 571 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 104, 136 |
| AleI | CACNNNNGTG | 1 cut(s) | 1835 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3504, 3536 |
| Alw21I | GWGCWC | 1 cut(s) | 2430 |
| AlwI | GGATC | 5 cut(s) | 901, 1886, 1905, 3514, 4673 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 217, 613, 638, 2101, 2629, 4219 |
| Ama87I | CYCGRG | 2 cut(s) | 3515, 4728 |
| AoxI | GGCC | 6 cut(s) | 2436, 2538, 3352, 3486, 3783, 4732 |
| ApoI | RAATTY | 4 cut(s) | 194, 1942, 2655, 2670 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 35, 194 |
| AspLEI | GCGC | 3 cut(s) | 1183, 2848, 3205 |
| AspS9I | GGNCC | 2 cut(s) | 2437, 2539 |
| AvaI | CYCGRG | 2 cut(s) | 3515, 4728 |
| BaeGI | GKGCMC | 2 cut(s) | 391, 3142 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 691, 724 |
| BanI | GGYRCC | 1 cut(s) | 386 |
| BanII | GRGCYC | 1 cut(s) | 2430 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 182, 214, 953, 985 |
| BauI | CACGAG | 7 cut(s) | 1541, 1730, 1805, 2270, 2534, 3611, 4502 |
| BbsI | GAAGAC | 3 cut(s) | 3251, 3312, 3762 |
| Bbv12I | GWGCWC | 1 cut(s) | 2430 |
| BbvI | GCAGC | 9 cut(s) | 397, 808, 811, 829, 1366, 2359, 2887, 3028, 3928 |
| BccI | CCATC | 4 cut(s) | 3344, 4108, 4379, 4609 |
| BclI | TGATCA | 4 cut(s) | 55, 763, 3798, 4347 |
| BfaI | CTAG | 9 cut(s) | 996, 1524, 2052, 2517, 3092, 3125, 3225, 3623, 3683 |
| BfmI | CTRYAG | 5 cut(s) | 199, 1380, 2373, 2901, 3830 |
| BfuAI | ACCTGC | 1 cut(s) | 1339 |
| BglII | AGATCT | 3 cut(s) | 1780, 2350, 3151 |
| BlpI | GCTNAGC | 1 cut(s) | 4278 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 571 |
| BmeT110I | CYCGRG | 2 cut(s) | 3515, 4728 |
| BmgT120I | GGNCC | 2 cut(s) | 2437, 2539 |
| BmiI | GGNNCC | 2 cut(s) | 388, 2753 |
| BmsI | GCATC | 4 cut(s) | 613, 818, 1897, 4463 |
| BpiI | GAAGAC | 3 cut(s) | 3251, 3312, 3762 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3416, 3448, 3498, 3530 |
| BpmI | CTGGAG | 3 cut(s) | 264, 1352, 3134 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4278 |
| Bsa29I | ATCGAT | 2 cut(s) | 3348, 4668 |
| BsaAI | YACGTR | 1 cut(s) | 4127 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1779, 2690 |
| BsaHI | GRCGYC | 1 cut(s) | 144 |
| BsaI | GGTCTC | 1 cut(s) | 1357 |
| BsaJI | CCNNGG | 2 cut(s) | 2227, 3540 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 4554, 4584, 4694, 4724 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2446 |
| Bse1I | ACTGG | 9 cut(s) | 211, 226, 247, 618, 1335, 1863, 2257, 2856, 3117 |
| Bse3DI | GCAATG | 1 cut(s) | 4298 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1779, 2690 |
| BseCI | ATCGAT | 2 cut(s) | 3348, 4668 |
| BseDI | CCNNGG | 2 cut(s) | 2227, 3540 |
| BseJI | GATNNNNATC | 2 cut(s) | 1779, 2690 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2446 |
| BseMI | GCAATG | 1 cut(s) | 4298 |
| BseNI | ACTGG | 9 cut(s) | 211, 226, 247, 618, 1335, 1863, 2257, 2856, 3117 |
| BseRI | GAGGAG | 9 cut(s) | 274, 1924, 3269, 3557, 3599, 3725, 4070, 4304, 4715 |
| BseSI | GKGCMC | 2 cut(s) | 391, 3142 |
| BseXI | GCAGC | 9 cut(s) | 397, 808, 811, 829, 1366, 2359, 2887, 3028, 3928 |
| BsgI | GTGCAG | 2 cut(s) | 873, 3857 |
| Bsh1236I | CGCG | 1 cut(s) | 1836 |
| BshFI | GGCC | 6 cut(s) | 2438, 2540, 3354, 3488, 3785, 4734 |
| BshNI | GGYRCC | 1 cut(s) | 386 |
| BshVI | ATCGAT | 2 cut(s) | 3348, 4668 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2430 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3515, 4728 |
| BslFI | GGGAC | 8 cut(s) | 199, 713, 930, 1283, 1811, 2276, 2377, 4632 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2446 |
| BsmBI | CGTCTC | 3 cut(s) | 135, 4103, 4143 |
| BsmFI | GGGAC | 8 cut(s) | 199, 713, 930, 1283, 1811, 2276, 2377, 4632 |
| BsmI | GAATGC | 2 cut(s) | 991, 2374 |
| BsnI | GGCC | 6 cut(s) | 2438, 2540, 3354, 3488, 3785, 4734 |
| Bso31I | GGTCTC | 1 cut(s) | 1357 |
| BsoBI | CYCGRG | 2 cut(s) | 3515, 4728 |
| Bsp1286I | GDGCHC | 3 cut(s) | 391, 2430, 3142 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4278 |
| BspACI | CCGC | 6 cut(s) | 223, 840, 1619, 1876, 2698, 2702 |
| BspANI | GGCC | 6 cut(s) | 2438, 2540, 3354, 3488, 3785, 4734 |
| BspDI | ATCGAT | 2 cut(s) | 3348, 4668 |
| BspFNI | CGCG | 1 cut(s) | 1836 |
| BspHI | TCATGA | 2 cut(s) | 58, 4102 |
| BspLI | GGNNCC | 2 cut(s) | 388, 2753 |
| BspMAI | CTGCAG | 3 cut(s) | 1384, 2377, 2905 |
| BspMI | ACCTGC | 1 cut(s) | 1339 |
| BspPI | GGATC | 5 cut(s) | 901, 1886, 1905, 3514, 4673 |
| BspQI | GCTCTTC | 2 cut(s) | 1581, 3836 |
| BspT107I | GGYRCC | 1 cut(s) | 386 |
| BspTNI | GGTCTC | 1 cut(s) | 1357 |
| BsrDI | GCAATG | 1 cut(s) | 4298 |
| BsrI | ACTGG | 9 cut(s) | 211, 226, 247, 618, 1335, 1863, 2257, 2856, 3117 |
| BssECI | CCNNGG | 2 cut(s) | 2227, 3540 |
| BssNI | GRCGYC | 1 cut(s) | 144 |
| BssSI | CACGAG | 7 cut(s) | 1541, 1730, 1805, 2270, 2534, 3611, 4502 |
| Bst2BI | CACGAG | 7 cut(s) | 1541, 1730, 1805, 2270, 2534, 3611, 4502 |
| BstACI | GRCGYC | 1 cut(s) | 144 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4300 |
| BstBAI | YACGTR | 1 cut(s) | 4127 |
| BstC8I | GCNNGC | 5 cut(s) | 625, 2700, 3021, 3172, 4296 |
| BstDSI | CCRYGG | 1 cut(s) | 2227 |
| BstFNI | CGCG | 1 cut(s) | 1836 |
| BstHHI | GCGC | 3 cut(s) | 1183, 2848, 3205 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 3104, 4300 |
| BstNSI | RCATGY | 1 cut(s) | 2200 |
| BstSFI | CTRYAG | 5 cut(s) | 199, 1380, 2373, 2901, 3830 |
| BstSLI | GKGCMC | 2 cut(s) | 391, 3142 |
| BstSNI | TACGTA | 1 cut(s) | 4127 |
| BstUI | CGCG | 1 cut(s) | 1836 |
| BstV1I | GCAGC | 9 cut(s) | 397, 808, 811, 829, 1366, 2359, 2887, 3028, 3928 |
| BstV2I | GAAGAC | 3 cut(s) | 3251, 3312, 3762 |
| BstX2I | RGATCY | 6 cut(s) | 1780, 1878, 1897, 2350, 3151, 3519 |
| BstYI | RGATCY | 6 cut(s) | 1780, 1878, 1897, 2350, 3151, 3519 |
| Bsu15I | ATCGAT | 2 cut(s) | 3348, 4668 |
| BsuRI | GGCC | 6 cut(s) | 2438, 2540, 3354, 3488, 3785, 4734 |
| BsuTUI | ATCGAT | 2 cut(s) | 3348, 4668 |
| BtgI | CCRYGG | 1 cut(s) | 2227 |
| BtsIMutI | CAGTG | 5 cut(s) | 581, 1243, 1771, 3110, 3441 |
| BveI | ACCTGC | 1 cut(s) | 1339 |
| Cac8I | GCNNGC | 5 cut(s) | 625, 2700, 3021, 3172, 4296 |
| CaiI | CAGNNNCTG | 6 cut(s) | 217, 613, 638, 2101, 2629, 4219 |
| CciI | TCATGA | 2 cut(s) | 58, 4102 |
| CfoI | GCGC | 3 cut(s) | 1183, 2848, 3205 |
| Cfr13I | GGNCC | 2 cut(s) | 2437, 2539 |
| ClaI | ATCGAT | 2 cut(s) | 3348, 4668 |
| CseI | GACGC | 1 cut(s) | 3756 |
| Csp6I | GTAC | 8 cut(s) | 220, 229, 970, 1538, 2450, 2531, 2978, 4238 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3169, 3204 |
| CviQI | GTAC | 8 cut(s) | 220, 229, 970, 1538, 2450, 2531, 2978, 4238 |
| DraI | TTTAAA | 1 cut(s) | 3991 |
| DraIII | CACNNNGTG | 3 cut(s) | 587, 1240, 2233 |
| DriI | GACNNNNNGTC | 1 cut(s) | 571 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 571 |
| EciI | GGCGGA | 1 cut(s) | 2717 |
| Ecl136II | GAGCTC | 1 cut(s) | 2428 |
| Eco105I | TACGTA | 1 cut(s) | 4127 |
| Eco24I | GRGCYC | 1 cut(s) | 2430 |
| Eco31I | GGTCTC | 1 cut(s) | 1357 |
| Eco32I | GATATC | 3 cut(s) | 2152, 2794, 3549 |
| Eco53kI | GAGCTC | 1 cut(s) | 2428 |
| Eco57I | CTGAAG | 6 cut(s) | 413, 1922, 2915, 2931, 3830, 4020 |
| Eco88I | CYCGRG | 2 cut(s) | 3515, 4728 |
| EcoICRI | GAGCTC | 1 cut(s) | 2428 |
| EcoRI | GAATTC | 1 cut(s) | 194 |
| EcoRV | GATATC | 3 cut(s) | 2152, 2794, 3549 |
| EcoT38I | GRGCYC | 1 cut(s) | 2430 |
| Esp3I | CGTCTC | 3 cut(s) | 135, 4103, 4143 |
| FaqI | GGGAC | 8 cut(s) | 199, 713, 930, 1283, 1811, 2276, 2377, 4632 |
| FauI | CCCGC | 1 cut(s) | 2691 |
| FbaI | TGATCA | 4 cut(s) | 55, 763, 3798, 4347 |
| FriOI | GRGCYC | 1 cut(s) | 2430 |
| FspBI | CTAG | 9 cut(s) | 996, 1524, 2052, 2517, 3092, 3125, 3225, 3623, 3683 |
| GlaI | GCGC | 3 cut(s) | 1182, 2847, 3204 |
| GsuI | CTGGAG | 3 cut(s) | 264, 1352, 3134 |
| HaeIII | GGCC | 6 cut(s) | 2438, 2540, 3354, 3488, 3785, 4734 |
| HgaI | GACGC | 1 cut(s) | 3756 |
| HhaI | GCGC | 3 cut(s) | 1183, 2848, 3205 |
| Hin1I | GRCGYC | 1 cut(s) | 144 |
| Hin6I | GCGC | 3 cut(s) | 1181, 2846, 3203 |
| HinP1I | GCGC | 3 cut(s) | 1181, 2846, 3203 |
| HincII | GTYRAC | 2 cut(s) | 265, 447 |
| HindII | GTYRAC | 2 cut(s) | 265, 447 |
| HindIII | AAGCTT | 3 cut(s) | 1961, 4257, 4556 |
| Hpy99I | CGWCG | 1 cut(s) | 4480 |
| HpyAV | CCTTC | 9 cut(s) | 184, 325, 955, 1897, 2890, 3052, 3056, 4501, 4585 |
| HpyCH4IV | ACGT | 5 cut(s) | 144, 1416, 3448, 3762, 4126 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 3104, 4300 |
| HpySE526I | ACGT | 5 cut(s) | 144, 1416, 3448, 3762, 4126 |
| Hsp92I | GRCGYC | 1 cut(s) | 144 |
| HspAI | GCGC | 3 cut(s) | 1181, 2846, 3203 |
| Ksp22I | TGATCA | 4 cut(s) | 55, 763, 3798, 4347 |
| LguI | GCTCTTC | 2 cut(s) | 1581, 3836 |
| LmnI | GCTCC | 5 cut(s) | 287, 2751, 3115, 3712, 4291 |
| Lsp1109I | GCAGC | 9 cut(s) | 397, 808, 811, 829, 1366, 2359, 2887, 3028, 3928 |
| LweI | GCATC | 4 cut(s) | 613, 818, 1897, 4463 |
| MaeI | CTAG | 9 cut(s) | 996, 1524, 2052, 2517, 3092, 3125, 3225, 3623, 3683 |
| MaeII | ACGT | 5 cut(s) | 144, 1416, 3448, 3762, 4126 |
| MaeIII | GTNAC | 8 cut(s) | 379, 1008, 2461, 4018, 4072, 4127, 4181, 4225 |
| MfeI | CAATTG | 2 cut(s) | 3324, 4092 |
| MflI | RGATCY | 6 cut(s) | 1780, 1878, 1897, 2350, 3151, 3519 |
| MhlI | GDGCHC | 3 cut(s) | 391, 2430, 3142 |
| MmeI | TCCRAC | 4 cut(s) | 934, 3177, 3547, 4032 |
| MroXI | GAANNNNTTC | 2 cut(s) | 35, 194 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1835 |
| MspA1I | CMGCKG | 4 cut(s) | 840, 1876, 2993, 3341 |
| MunI | CAATTG | 2 cut(s) | 3324, 4092 |
| Mva1269I | GAATGC | 2 cut(s) | 991, 2374 |
| MvnI | CGCG | 1 cut(s) | 1836 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 3104, 4300 |
| NlaIV | GGNNCC | 2 cut(s) | 388, 2753 |
| NmuCI | GTSAC | 2 cut(s) | 2461, 4072 |
| NspI | RCATGY | 1 cut(s) | 2200 |
| OliI | CACNNNNGTG | 1 cut(s) | 1835 |
| PaeR7I | CTCGAG | 2 cut(s) | 3515, 4728 |
| PagI | TCATGA | 2 cut(s) | 58, 4102 |
| PciI | ACATGT | 1 cut(s) | 2196 |
| PciSI | GCTCTTC | 2 cut(s) | 1581, 3836 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1451 |
| PctI | GAATGC | 2 cut(s) | 991, 2374 |
| PdmI | GAANNNNTTC | 2 cut(s) | 35, 194 |
| Ppu21I | YACGTR | 1 cut(s) | 4127 |
| PscI | ACATGT | 1 cut(s) | 2196 |
| Psp124BI | GAGCTC | 1 cut(s) | 2430 |
| Psp1406I | AACGTT | 1 cut(s) | 3448 |
| PspN4I | GGNNCC | 2 cut(s) | 388, 2753 |
| PspPI | GGNCC | 2 cut(s) | 2437, 2539 |
| PspXI | VCTCGAGB | 1 cut(s) | 4728 |
| PstI | CTGCAG | 3 cut(s) | 1384, 2377, 2905 |
| PstNI | CAGNNNCTG | 6 cut(s) | 217, 613, 638, 2101, 2629, 4219 |
| PsuI | RGATCY | 6 cut(s) | 1780, 1878, 1897, 2350, 3151, 3519 |
| PvuII | CAGCTG | 2 cut(s) | 2993, 3341 |
| RsaI | GTAC | 8 cut(s) | 221, 230, 971, 1539, 2451, 2532, 2979, 4239 |
| RsaNI | GTAC | 8 cut(s) | 220, 229, 970, 1538, 2450, 2531, 2978, 4238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1835 |
| SacI | GAGCTC | 1 cut(s) | 2430 |
| SapI | GCTCTTC | 2 cut(s) | 1581, 3836 |
| Sau96I | GGNCC | 2 cut(s) | 2437, 2539 |
| SduI | GDGCHC | 3 cut(s) | 391, 2430, 3142 |
| SfaNI | GCATC | 4 cut(s) | 613, 818, 1897, 4463 |
| SfcI | CTRYAG | 5 cut(s) | 199, 1380, 2373, 2901, 3830 |
| Sfr274I | CTCGAG | 2 cut(s) | 3515, 4728 |
| SlaI | CTCGAG | 2 cut(s) | 3515, 4728 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1835 |
| SnaBI | TACGTA | 1 cut(s) | 4127 |
| SsiI | CCGC | 6 cut(s) | 223, 840, 1619, 1876, 2698, 2702 |
| SspMI | CTAG | 9 cut(s) | 996, 1524, 2052, 2517, 3092, 3125, 3225, 3623, 3683 |
| SstI | GAGCTC | 1 cut(s) | 2430 |
| TaiI | ACGT | 5 cut(s) | 147, 1419, 3451, 3765, 4129 |
| TaqII | GACCGA | 1 cut(s) | 2037 |
| TatI | WGTACW | 2 cut(s) | 969, 1537 |
| TscAI | CASTG | 5 cut(s) | 588, 1243, 1771, 3117, 3441 |
| TseFI | GTSAC | 2 cut(s) | 2461, 4072 |
| Tsp45I | GTSAC | 2 cut(s) | 2461, 4072 |
| TspGWI | ACGGA | 3 cut(s) | 2435, 2977, 4430 |
| TspRI | CASTG | 5 cut(s) | 588, 1243, 1771, 3117, 3441 |
| XapI | RAATTY | 4 cut(s) | 194, 1942, 2655, 2670 |
| XbaI | TCTAGA | 1 cut(s) | 3622 |
| XceI | RCATGY | 1 cut(s) | 2200 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 169 |
| XhoI | CTCGAG | 2 cut(s) | 3515, 4728 |
| XmnI | GAANNNNTTC | 2 cut(s) | 35, 194 |
| XspI | CTAG | 9 cut(s) | 996, 1524, 2052, 2517, 3092, 3125, 3225, 3623, 3683 |
| ZraI | GACGTC | 1 cut(s) | 145 |