Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004928

Physical Location & Seq

Genomic Coordinates Reverse (-)

12782066 .. 12789686

Gene Structure 7621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG155900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5379 bp

ATGATGACAAAACACCGCTTTCGGGAGTCTATTAAGTCCTTGTTTGGAAGTCACATCGATGCAGAGAAGGATGAACAGCTCAAAGGGACTAAAATAGATATGGAGGACAAAGTGAATAGAATATTGAAGCTTCTAAAAGATGAAGATCTTGAAGAAAAAGATTCCAACCCGGTGGAGAACTCCAAAAAGGAACCTCTTGCAGAGCTAATTCAGGATTTCCACAAACAATACCAATCCCTCTATGCAGAATATGATCATCTAACAGGAGTGCTAAAGAAAAAAATGCGTGGCAAGCAAGATAAGGATAACAGTTCTTCATCGAGCTCAGAGTCTGATTCAGAATATTCTTCAAATGACAAGAAAAGTAAGAATGGACTACTGGAAGGTGACTATCAGAAAATAGCTGATGTTAAGCAAGAACTCGAATCAGCACATCTAGAAGTTGCTGACCTGAAGAGGAAACTGACGGCTACAATTGAAGAAAAAGAGGCGTTAAACTTGGAATATGCGACAGCTTTGAGCAAGATAGAAGAAACAGAGAAGATTTCCAAAGATTTGAAGACTGAAGCTGAAAGATTAGATGTTGAAAAACTGAAACTTTTGGCTGAGAATAGTGAACTAGATCAAAAACTTGAGACTGGTGGAAAGAAAGAAGCTGAACTGAGTCGAAAAGTGGAAGATTTGGAAAGAGAGAGAGATAATCTGATTAAGGAGAAAGAGACTAGTCTAAGAAGGATTGAAGATGGAGAAAATATTTCAGCAGACTTGAGAAGTTTGGTTGATCACATGAAAGATGAAAAAGTAATCCTCGAGCAACAACTAGAATCTCTTAGAGGGGACATCTCAAATATGAAGCATGAGCTGGAATCTTCAGAGCAGCAAGTGTCAGATTTAAGCAAAGCTAAGGAGGAAGAAACCTTGAAAGTTTTGGAGATCTCAAGTGAGATTCAGCAGGCACAGAATGTGATACAAGAACTCACAGATGAAGCTAGTCAGCTTAAGGAAAAACTCGATCAGAAGGAGCAGGACCTTGAATCTTTGCAAGGTCAGAAAAGAGATTTGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGTTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTACTCAACTCTGTCTGAGAGGCACAAGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAATCTTTGCAAGGCGAGAAAAGAAATATGGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTACTCAACTCTGTCTGAGAGGCACAAGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAATCTTTGCAAGGCGAGAAAAGAAATATAGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTTGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGGGAGAGAAGCTGAACTTTTTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAGCGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCAAATCAATGTCAAAAGAGAGAGAAGCTGACCTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGGTATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAATTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGGAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTTTGAGAAGCATACACTGCATGAGAACAAAACTTTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAATAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGGAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGCAATGGAGTATTCAACTCTGTTTGAGAAGCATACACTGCATGAGAACAAAACTTTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGGAACTTGAGGAGACCAATAATGAACATGGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTTTGAGAAGCATACACTGCATGAGAACAAAACTTTGGTGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTTGAGTCTTTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGTGGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGGGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAAACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAACTGGAGTATTCAACTCTGTCTGAGAAGCATATGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGATAGAGCTGAAATCTGACCTCGAATTTTTGCAAGGCGAGAAAAGAGATGTGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTGACAAAGAAACTTCAGGATAGCAATGATGAATCATCGTCTACTGTAGCAGATTTGACAGCACAGATCAACAATCTGCTAGCAGACTTAAGTTCTGTGCGCCGTGAGAAAGTTGAATTGGAGGAAAATATGGCATCTAAAAGTGATGAAGCATCGACTCAGGTCAAGGGCTTAATGGAACAGATAAATGTATTGCAGCAGCAATTGGAGTCCCTACACAGCCAGAAAGCTGAATTGCAAGTGCAGCTTGAGAATAAAACTCGAGAAATTTCAGAGTACTTGATCCAGGTACAAATTCTGAATGAAGAGATAGCAAACAAGACGACGGATCATCAGAAGATTCTGGAAGAGAAAGAGATTTTGATAGCAGAAATGAAAGATCTTAAGCTAAAAGTGGAATCCATGCAGAATCAGAAGAATGAACTTGAAGAGGATATCAGAACGAAAATCCTAGAGCATGATCAGTTGAGAGCAGAAATGTTGGAGCTAAAGGATCATTTTTCTGTATTTGAGAAGACAATAGCACAAAGAGAGCTAGAATTCTCCTCTCTCCAAGAGAAACATGAAAGTGGACAGAACGAAGCCTCTGCTCAAGTAGTGGCCCTTGTGGCACAGGTTAACGGTCTACAAGAAGAGTTGGAGTCATTGCAAACCCAGAATAAGCAAATGGAGTTGCAGTTTGAGAGGGAAAAACAAGAACTTCTAGAGAGCTTGACACAGTTGCAAACTGATAAGATCGAGTTAACGAGCAAGATCACTGATCTTCAGAGACTGCTTAATGAACAGGAGGATTTATACACCAAGTTAAATGAGGAACATAAACAGCTTGAAGGCAAGTGTCAGGACTACGAGGTTAGCATTGAATCCAAAGATCAGATAATAGCTGATTTGGAACAAATGTCTGAAGACCTGAAAAGAGACCTTGAAGAAAAAGGTGACGAACTTGGTTCTTTGGTAGAGAAATCTCGCAATACTGAAGTTAAGCTTCGTCTGTCAAACCAGAAGCTCCGGGTTACAGAGCAAGTACTGGCCGAGAAGGAACACAACTTCAGAATTGCTGAGCTGAAATTCCAAGAAGAACAAAGAGTGCTCGAAGACAGGATTGCTGCATTGTCTGGTATAATCTCTGCAAACAATGAAGCTTATCAGAGAAACATCAACTGTATTTCAGACAATGTGAACAGTTCTTTGACTGCACTGGAATCTGTGATTAAGAAATTTGTGGATGACTATGCGAAGTATGAGAGGTGTATTGCTGAAACATCGGAGCAGCTTCAGACTGCAAAGAAATGGGTTGCGGAAACAAATGATGAGAGAGAGAAGTTGAAGAGGGAGGTGGGGGCCCTAAGCAAACAACTGCAAGATAAAAAAGCGGAAGCATTGGTGTTTAGAGAGAGGGTTGAGAAGTTGGAGACAGAGGCGAGCAAGGAACAAGTGGAGAAGGGGGGTCTGATCAAAGCTGTGAATCAGCTTGAAAAGAAGGTAGAGGAGTTGAAGCAGATTGTGGAAGAGAAGAACAAGGGCATATTGGGTCTGGGAGAGGAGAAGCGAGAAGCCATAAGGCAGCTGTGCATATGGATCGAGTATCATCAGAGTCGCTATGATCATCTCAAGGAGGTGCTTTTAAAGATGGCTCCAAGAGGCCAGAGGAGGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031090 GO:0032386 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0042221 GO:0042306 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046822 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051223 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0090087 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1900180 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903827 GO:1904589 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

1792

Amino Acids

206.22

Weight (kDa)

4.9

Isoelectric Point (pI)

46.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIP1	PF07765	15 - 85	2.9e-17	KIP1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004928)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64330 AT5G41790 AT5G41790
fragaria_vesca	FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072
malus_domestica	MD06G1102300.v1.1 MD14G1121500.v1.1
prunus_persica	Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1
pyrus_communis	pycom06g09710
rosa_chinensis	RchiOBHm_Chr7g0195431
rosa_laevigata	RLG00000004121
rosa_multiflora	Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00260490
rosa_rugosa	Rorug07G0023200
rosa_samantha	Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700
rosa_wichuraiana	Rw7G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	5 cut(s)	1100, 1418, 1736, 3326, 3644
AccI	GTMKAC	2 cut(s)	3761, 4345
AciI	CCGC	3 cut(s)	16, 5018, 5093
AclWI	GGATC	4 cut(s)	3997, 4056, 4221, 5306
AcoI	YGGCCR	1 cut(s)	4749
AcuI	CTGAAG	9 cut(s)	473, 585, 855, 3719, 4469, 4644, 4716, 4753, 4979
AfiI	CCNNNNNNNGG	2 cut(s)	22, 5371
AflII	CTTAAG	3 cut(s)	998, 3808, 4103
AhlI	ACTAGT	1 cut(s)	722
AjnI	CCWGG	1 cut(s)	4005
Alw21I	GWGCWC	2 cut(s)	326, 4812
AlwI	GGATC	4 cut(s)	3997, 4056, 4221, 5306
AlwNI	CAGNNNCTG	2 cut(s)	332, 4492
Ama87I	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
ApaI	GGGCCC	1 cut(s)	5065
AspLEI	GCGC	8 cut(s)	1303, 1621, 1939, 2257, 2575, 2893, 3529, 3822
AsuC2I	CCSGG	2 cut(s)	170, 4730
AsuHPI	GGTGA	2 cut(s)	398, 4667
AsuII	TTCGAA	1 cut(s)	2409
AsuNHI	GCTAGC	1 cut(s)	3799
AvaI	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
AvaII	GGWCC	1 cut(s)	1027
BaeGI	GKGCMC	1 cut(s)	5065
BanII	GRGCYC	2 cut(s)	326, 5065
BbsI	GAAGAC	4 cut(s)	566, 4241, 4632, 4821
Bbv12I	GWGCWC	2 cut(s)	326, 4812
BccI	CCATC	2 cut(s)	737, 5344
BceAI	ACGGC	2 cut(s)	483, 3807
BcgI	CGANNNNNNTGC	4 cut(s)	4289, 4323, 5281, 5315
BciT130I	CCWGG	1 cut(s)	4007
BclI	TGATCA	5 cut(s)	253, 781, 4180, 5172, 5323
BcnI	CCSGG	2 cut(s)	170, 4730
BcuI	ACTAGT	1 cut(s)	722
BfmI	CTRYAG	1 cut(s)	3765
BfrI	CTTAAG	3 cut(s)	998, 3808, 4103
BfuAI	ACCTGC	5 cut(s)	1100, 1418, 1736, 3326, 3644
BglI	GCCNNNNNGGC	1 cut(s)	4328
BglII	AGATCT	3 cut(s)	145, 933, 4099
BlpI	GCTNAGC	1 cut(s)	4779
BmcAI	AGTACT	4 cut(s)	1253, 1571, 3998, 4746
Bme1390I	CCNGG	3 cut(s)	170, 4007, 4730
Bme18I	GGWCC	1 cut(s)	1027
BmeT110I	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
BmiI	GGNNCC	4 cut(s)	192, 5062, 5063, 5355
BmrFI	CCNGG	3 cut(s)	170, 4007, 4730
BmsI	GCATC	3 cut(s)	49, 3863, 3881
BmtI	GCTAGC	1 cut(s)	3803
BoxI	GACNNNNGTC	1 cut(s)	3881
BpiI	GAAGAC	4 cut(s)	566, 4241, 4632, 4821
BpmI	CTGGAG	1 cut(s)	3494
Bpu10I	CCTNAGC	2 cut(s)	903, 5066
Bpu1102I	GCTNAGC	1 cut(s)	4779
Bpu14I	TTCGAA	1 cut(s)	2409
BpuMI	CCSGG	2 cut(s)	170, 4730
Bsa29I	ATCGAT	1 cut(s)	57
BsaBI	GATNNNNATC	1 cut(s)	144
BsaI	GGTCTC	8 cut(s)	1190, 1508, 1826, 2144, 2462, 2780, 3098, 4632
BsaXI	ACNNNNNCTCC	2 cut(s)	4382, 4412
Bsc4I	CCNNNNNNNGG	2 cut(s)	22, 5371
Bse3DI	GCAATG	7 cut(s)	1991, 2309, 2627, 2841, 2945, 3751, 4364
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	1 cut(s)	4007
BseCI	ATCGAT	1 cut(s)	57
BseGI	GGATG	2 cut(s)	76, 4951
BseJI	GATNNNNATC	1 cut(s)	144
BseLI	CCNNNNNNNGG	2 cut(s)	22, 5371
BseMI	GCAATG	7 cut(s)	1991, 2309, 2627, 2841, 2945, 3751, 4364
BseSI	GKGCMC	1 cut(s)	5065
BsgI	GTGCAG	2 cut(s)	3983, 4899
BshVI	ATCGAT	1 cut(s)	57
BsiHKAI	GWGCWC	2 cut(s)	326, 4812
BsiHKCI	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
BsiSI	CCGG	2 cut(s)	170, 4729
BslFI	GGGAC	3 cut(s)	100, 851, 3916
BslI	CCNNNNNNNGG	2 cut(s)	22, 5371
BsmFI	GGGAC	3 cut(s)	100, 851, 3916
BsmI	GAATGC	9 cut(s)	1111, 1429, 1747, 2065, 2383, 2701, 3019, 3337, 3655
Bso31I	GGTCTC	8 cut(s)	1190, 1508, 1826, 2144, 2462, 2780, 3098, 4632
BsoBI	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
Bsp119I	TTCGAA	1 cut(s)	2409
Bsp120I	GGGCCC	1 cut(s)	5061
Bsp1286I	GDGCHC	3 cut(s)	326, 4812, 5065
Bsp1720I	GCTNAGC	1 cut(s)	4779
BspACI	CCGC	3 cut(s)	16, 5018, 5093
BspDI	ATCGAT	1 cut(s)	57
BspLI	GGNNCC	4 cut(s)	192, 5062, 5063, 5355
BspMI	ACCTGC	5 cut(s)	1100, 1418, 1736, 3326, 3644
BspOI	GCTAGC	1 cut(s)	3803
BspPI	GGATC	4 cut(s)	3997, 4056, 4221, 5306
BspT104I	TTCGAA	1 cut(s)	2409
BspTI	CTTAAG	3 cut(s)	998, 3808, 4103
BspTNI	GGTCTC	8 cut(s)	1190, 1508, 1826, 2144, 2462, 2780, 3098, 4632
BsrDI	GCAATG	7 cut(s)	1991, 2309, 2627, 2841, 2945, 3751, 4364
Bst2UI	CCWGG	1 cut(s)	4007
Bst4CI	ACNGT	6 cut(s)	311, 3766, 4343, 4440, 4883, 4904
Bst6I	CTCTTC	7 cut(s)	449, 4020, 4062, 4143, 4347, 5042, 5223
BstAFI	CTTAAG	3 cut(s)	998, 3808, 4103
BstAPI	GCANNNNNTGC	8 cut(s)	1279, 1597, 1915, 2233, 2551, 2869, 3187, 3505
BstBI	TTCGAA	1 cut(s)	2409
BstC8I	GCNNGC	8 cut(s)	293, 954, 2065, 2383, 2701, 3019, 3801, 5143
BstF5I	GGATG	2 cut(s)	76, 4951
BstHHI	GCGC	8 cut(s)	1303, 1621, 1939, 2257, 2575, 2893, 3529, 3822
BstNI	CCWGG	1 cut(s)	4007
BstPAI	GACNNNNGTC	1 cut(s)	3881
BstSCI	CCNGG	3 cut(s)	168, 4005, 4728
BstSFI	CTRYAG	1 cut(s)	3765
BstSLI	GKGCMC	1 cut(s)	5065
BstV2I	GAAGAC	4 cut(s)	566, 4241, 4632, 4821
BstX2I	RGATCY	3 cut(s)	145, 933, 4099
BstXI	CCANNNNNNTGG	1 cut(s)	172
BstYI	RGATCY	3 cut(s)	145, 933, 4099
Bsu15I	ATCGAT	1 cut(s)	57
BsuTUI	ATCGAT	1 cut(s)	57
BtsCI	GGATG	2 cut(s)	76, 4951
BtsI	GCAGTG	3 cut(s)	2549, 2867, 3185
BtsIMutI	CAGTG	5 cut(s)	2549, 2867, 3185, 4476, 4916
BveI	ACCTGC	5 cut(s)	1100, 1418, 1736, 3326, 3644
Cac8I	GCNNGC	8 cut(s)	293, 954, 2065, 2383, 2701, 3019, 3801, 5143
CaiI	CAGNNNCTG	2 cut(s)	332, 4492
CfoI	GCGC	8 cut(s)	1303, 1621, 1939, 2257, 2575, 2893, 3529, 3822
ClaI	ATCGAT	1 cut(s)	57
DraI	TTTAAA	1 cut(s)	5346
EaeI	YGGCCR	1 cut(s)	4749
Eam1104I	CTCTTC	7 cut(s)	449, 4020, 4062, 4143, 4347, 5042, 5223
EarI	CTCTTC	7 cut(s)	449, 4020, 4062, 4143, 4347, 5042, 5223
Ecl136II	GAGCTC	1 cut(s)	324
Eco24I	GRGCYC	2 cut(s)	326, 5065
Eco31I	GGTCTC	8 cut(s)	1190, 1508, 1826, 2144, 2462, 2780, 3098, 4632
Eco32I	GATATC	1 cut(s)	4156
Eco47I	GGWCC	1 cut(s)	1027
Eco53kI	GAGCTC	1 cut(s)	324
Eco57I	CTGAAG	9 cut(s)	473, 585, 855, 3719, 4469, 4644, 4716, 4753, 4979
Eco88I	CYCGRG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
EcoICRI	GAGCTC	1 cut(s)	324
EcoO109I	RGGNCCY	3 cut(s)	1027, 5061, 5062
EcoRI	GAATTC	2 cut(s)	2405, 4259
EcoRII	CCWGG	1 cut(s)	4005
EcoRV	GATATC	1 cut(s)	4156
EcoT38I	GRGCYC	2 cut(s)	326, 5065
FaqI	GGGAC	3 cut(s)	100, 851, 3916
FauNDI	CATATG	2 cut(s)	3501, 5294
FbaI	TGATCA	5 cut(s)	253, 781, 4180, 5172, 5323
FblI	GTMKAC	2 cut(s)	3761, 4345
FokI	GGATG	2 cut(s)	83, 4958
FriOI	GRGCYC	2 cut(s)	326, 5065
GlaI	GCGC	8 cut(s)	1302, 1620, 1938, 2256, 2574, 2892, 3528, 3821
GsuI	CTGGAG	1 cut(s)	3494
HapII	CCGG	2 cut(s)	170, 4729
HhaI	GCGC	8 cut(s)	1303, 1621, 1939, 2257, 2575, 2893, 3529, 3822
Hin6I	GCGC	8 cut(s)	1301, 1619, 1937, 2255, 2573, 2891, 3527, 3820
HinP1I	GCGC	8 cut(s)	1301, 1619, 1937, 2255, 2573, 2891, 3527, 3820
HincII	GTYRAC	2 cut(s)	4339, 4464
HindII	GTYRAC	2 cut(s)	4339, 4464
HindIII	AAGCTT	3 cut(s)	128, 4703, 4860
HpaI	GTTAAC	2 cut(s)	4339, 4464
HpaII	CCGG	2 cut(s)	170, 4729
HphI	GGTGA	2 cut(s)	398, 4667
Hpy99I	CGWCG	1 cut(s)	4048
HpyAV	CCTTC	8 cut(s)	61, 377, 726, 1012, 4544, 4750, 5155, 5194
HpyCH4III	ACNGT	6 cut(s)	311, 3766, 4343, 4440, 4883, 4904
HspAI	GCGC	8 cut(s)	1301, 1619, 1937, 2255, 2573, 2891, 3527, 3820
Ksp22I	TGATCA	5 cut(s)	253, 781, 4180, 5172, 5323
KspAI	GTTAAC	2 cut(s)	4339, 4464
LweI	GCATC	3 cut(s)	49, 3863, 3881
MaeIII	GTNAC	4 cut(s)	50, 386, 4655, 4732
MfeI	CAATTG	2 cut(s)	474, 3923
MflI	RGATCY	3 cut(s)	145, 933, 4099
MhlI	GDGCHC	3 cut(s)	326, 4812, 5065
MmeI	TCCRAC	4 cut(s)	189, 4182, 4338, 5109
MslI	CAYNNNNRTG	2 cut(s)	57, 4287
MspA1I	CMGCKG	1 cut(s)	5287
MspCI	CTTAAG	3 cut(s)	998, 3808, 4103
MspI	CCGG	2 cut(s)	170, 4729
MspR9I	CCNGG	3 cut(s)	170, 4007, 4730
MunI	CAATTG	2 cut(s)	474, 3923
Mva1269I	GAATGC	9 cut(s)	1111, 1429, 1747, 2065, 2383, 2701, 3019, 3337, 3655
MvaI	CCWGG	1 cut(s)	4007
NciI	CCSGG	2 cut(s)	170, 4730
NdeI	CATATG	2 cut(s)	3501, 5294
NheI	GCTAGC	1 cut(s)	3799
NlaIV	GGNNCC	4 cut(s)	192, 5062, 5063, 5355
NmeAIII	GCCGAG	1 cut(s)	4777
NmuCI	GTSAC	3 cut(s)	50, 386, 4655
NspV	TTCGAA	1 cut(s)	2409
PaeR7I	CTCGAG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
PctI	GAATGC	9 cut(s)	1111, 1429, 1747, 2065, 2383, 2701, 3019, 3337, 3655
PpuMI	RGGWCCY	1 cut(s)	1027
PshAI	GACNNNNGTC	1 cut(s)	3881
Psp124BI	GAGCTC	1 cut(s)	326
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	1 cut(s)	4005
PspGI	CCWGG	1 cut(s)	4005
PspN4I	GGNNCC	4 cut(s)	192, 5062, 5063, 5355
PspOMI	GGGCCC	1 cut(s)	5061
PspPPI	RGGWCCY	1 cut(s)	1027
PspXI	VCTCGAGB	5 cut(s)	809, 1985, 2303, 2621, 2939
PstNI	CAGNNNCTG	2 cut(s)	332, 4492
PsuI	RGATCY	3 cut(s)	145, 933, 4099
PvuII	CAGCTG	1 cut(s)	5287
RseI	CAYNNNNRTG	2 cut(s)	57, 4287
SacI	GAGCTC	1 cut(s)	326
ScaI	AGTACT	4 cut(s)	1253, 1571, 3998, 4746
ScrFI	CCNGG	3 cut(s)	170, 4007, 4730
SduI	GDGCHC	3 cut(s)	326, 4812, 5065
SfaNI	GCATC	3 cut(s)	49, 3863, 3881
SfcI	CTRYAG	1 cut(s)	3765
Sfr274I	CTCGAG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
SfuI	TTCGAA	1 cut(s)	2409
SinI	GGWCC	1 cut(s)	1027
SlaI	CTCGAG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
SmiMI	CAYNNNNRTG	2 cut(s)	57, 4287
SpeI	ACTAGT	1 cut(s)	722
SsiI	CCGC	3 cut(s)	16, 5018, 5093
SspI	AATATT	3 cut(s)	123, 344, 754
SstI	GAGCTC	1 cut(s)	326
StyD4I	CCNGG	3 cut(s)	168, 4005, 4728
TaaI	ACNGT	6 cut(s)	311, 3766, 4343, 4440, 4883, 4904
TatI	WGTACW	4 cut(s)	1251, 1569, 3996, 4744
TscAI	CASTG	5 cut(s)	2556, 2874, 3192, 4483, 4923
TseFI	GTSAC	3 cut(s)	50, 386, 4655
Tsp45I	GTSAC	3 cut(s)	50, 386, 4655
TspGWI	ACGGA	1 cut(s)	4061
TspRI	CASTG	5 cut(s)	2556, 2874, 3192, 4483, 4923
Vha464I	CTTAAG	3 cut(s)	998, 3808, 4103
VpaK11BI	GGWCC	1 cut(s)	1027
XbaI	TCTAGA	2 cut(s)	436, 4423
XhoI	CTCGAG	6 cut(s)	809, 1985, 2303, 2621, 2939, 3981
XmiI	GTMKAC	2 cut(s)	3761, 4345
ZrmI	AGTACT	4 cut(s)	1253, 1571, 3998, 4746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.