RLG00000004121

Intracellular protein transport protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
56370864 .. 56383275
12412 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004121

Sequence Viewer

Length: 8274 bp
ATGATTAAGCATCGCTGGAGGGAGCTAGCAAAGTCCTTTGGGGATCATGTTGATCCTGATAAAACTGAACAGTTGAAGAGGACTAAATCAGATATTGAAAATAATGTGACAAGGATCTTCAAGCTTATAAAAAGTGAAGACCTCGGAAAGAAAGATGGGAACCGAAAAGATGGGAACCGAAGAGATTCAAAGAATGAGAGTGAACTTGTTGGACTCATTGAGAATTTCTACCAACAGTACCAGTCACTCTATGCATTGTATGATCATCTAATAGGAGAGTCGGGAAGAATAGTTCGGAGAAGAAAAGTGAGAACAGGCTCTTCTCCCTTGTCTCCCTCCAGCTCTGGCTCAGACTCTGAGTATTTTTCCTCAGACGAAATTGACAATAATAATGTCAAGCCGGAAAATCATGAGCATCAGAAGATGGCAGACAGCGATAATCAAGACCTTAAAACTGAGAATTTGGGTCTGAAGCAACTAACGTTGTCTAGGAGTTCTAGTGAAGGAAAGGACGCAATAAATACAGAATATTTGGCAGCACTGAAAAAAGTACATGCAGATGATATTACAAATGAAGATCGCAGGAATGAAGTGGATGCAAGAGTAAAGGAACTTTCAGCTCTTGTTGAGGCGCATGAACATCACGGGACTCAATCATCAGCTAGGGTGAAAGAGTTAGAGGCCCAGTTAGCTGGCTTCAAAACTGATTTGGAGTCATTGTGCAGCCAGAAAAGAGATTTGGAAGCATGGAAAGAAGACAGAGTTGCTGAAGCTAAACAGCTAGGAGATAAAAACATGGGTCTCCATGCCCGGATTTTGGAACTCGAGTTAGTTTTAAAAGAAAAAAATGATGAAATATCTGATCTCGTGAAGAAACTCGAAAATGAGAGTAGTTCAACACCGAAAGTTGCATATTTGATGGCACAGACCAGCAATCTGCAACTGGAAGTTGAGTCATTGCACGCTCAAAAAGGGGAAATGGAAGAAAGGATGGCTACTGTGAAAACTGAATCATCGGATCAAGTTGAGGAACTCACAGATAAGATCAATGCAATGAAGCAGGAATTAGAGACCCTGAGCAGGGAGAGAGCCGAAACAGGAGTGCAACTAGATAGGAAGAACAAAGAAATCTCCCAAGAACTGCACCAGATAGAAACTTTGAAGGAGGAACTGAAAAGAAAAGATGTAGCTGAAAAGAAAATATCGGAAGAAAGACAACGTTTTCTTAAGCAGGTGAAGGACATGGAATTAGAAGTGGACTCTCTACGCAGCCACAAAAAAAATCTGGAAAAGCAAAAAAGAAGTAAAATGCATGAGGCGGATAAGCTGAGAAGGGAAAGTGAGGGTTTGCGTGCCAAGATAGTCAACTTGGAGAAAACTTTGTCCCAGAGAGGGGAGGAGGTTTCTGCTCTTCGTAAAGAATGTGAGGATGGAAAGAATGAAGCTTCTACTCAACTTATGACTTTGATGACAGAAGTCAGCAGTTTGAAACAGGAGTTGGATTCCGTAAAGCTCCAAAAGAGCCAGCTAGAATTGCAGTGTGAGAAAGAGAACAAGGAATGGTCGAATAGACTAACTGAGATGGAAAATGAAACCGAAAAGAAAATGCTGGAAGAAAGACAGCGGTTTCTTGATCAGATAAAGGACATGGAAAAGGAAGTGGACTCTCTATGCAGCCAAAATACCAATTTGAAAAATCAGATAACAAGTAAAATCCATGACACTGACATGCTGCAGCGTGAAAATGAGGGTCTAAATGCTAGAATTTTTGAGTTGGATAAGACATTGACCGAGAGAGGGGATGAGGTTGAAGCTCTTCGTAGAGAATGCGAGGATGGACACAAGGAAGCTGCTAATAAACTTATGGCCTTAACAACACAGGTACGCGATTTGAAACAGGAGTTGGATACCTTGACCAAGAAAAGCCAGTTGGAGTTACAGAGTGCCACAGAGAACAAAGAATATAAGGAAAGACAGACCGAGATGGAAGGAAAGATTGCTGATCAGCAGAGAGTTATTAAGGAACAGGAAGATACTATCAAGAAGATCACTAAGGAGTATAAAAACGCTAAAATGTGGTTTCCTGAATCCAAGCTAAATCTGCAGCTTGCCGAAAGAAAGATGGAGGAATTGGCAAAAAAGCACCGCGTACAGTTTGAAGACAATGTCCGGCTCTTATACCAGAGAATCCGGGTGGCAGAACATATACACAATGACACAAAAGAGAGCTACTGGAGAATGAAAGAGGAGTATGAGAAAGAAACAAGAGAGATCAGAGAAAAGCTTGCATTTTACGAAAATCCACTCAAAAAGATGAAGGAGGTATCCGAAACAGCAAAGAGAACTCTGAACCGATTGGATAGGGTGGCATGTTGGTTTGATAAGGAGCACAGCAACTTTTTGAACAACATATCCAGAATGTCTGATGAGGTTCAGGTTGCAAAAAGTTGGGTTACCGGGGCAACCAGCGAGATCAAACGGCTGAAGCGTCATGCCGATTGCTTGGCTGCTCAGCTGGATGAAAAGGAAGAACAGGAGAGTTTGTTAAGGGAGAAAGTTTGGAAGTTAGAGGCAACGGCAAGCAAGGAAGCCGGAGAGAAGCTGAACTTAATGAAAAACTTTAGCCAACTCGAGAAGCAGGTAGCGAAAATGGAGAAGACAATAAAGGAGAAGGATGAAGAATTGTTGAGTCTTGGTGAGGAGAAGAGGGAGGTCATAAGGCAGCTATGTATCTTAATTGATCATCACCGAATCCGCTATGATGATCTTAAGGAAGTGATAACAAAGAGGTCTGGTCGATCCAGTACTCTTCCTAAGGACGACCTAAAGACTTGGAGCAGGAGATGGATATACGCTCACCTTGACTCACATCTAAGAGGGAAGTTCGGTAATAGCATGATGACAAAACACCGCTTTCGGGAGTCTATTAAATCCTTGTTTGGAAGTCACATCGATGCAGAGAAGGATGAACAGCTCAAAGGGACTAAAATAGATATGGAGGACAAAGTGAATAGAATATTGAAGCTTCTAAAAGATGAAGATCTTGAAGAAAAAGATTCCAACCCGGTGGAGAACTCCAAAAAGGAACCTCTTGCAGAGCTAATTCAGGATTTCCACAAACAATACCAATCCCTCTATGCAGAATATGATCATCTAACAGGAGTGTTAAAGAAAAAAATGCGTGGCAAGCAAGATAAGGATAGCGGTTCTTCATCGAGCTCAGAGTCTGATTCAGAATATTCTTCAAATGACAAGAAAAGTAAGAATGGACTACGGGAAAGTGACTATCAGAAAATAGCTGATGTTAAGCAAGAACTCGAATCAGCACATCTAGAAGTTGCTGACCTGAAGAGGAAACTGACGGCTACAATTGAAGAAAAAGAGGCGTTAAACTTGCACTATGCGATGGCTTTGAGCAAGATAGAAGAAACAGAGAAGATTTCCAAAGATTTGAAGACTGAAGCTGAAAGATTAGATGTTGAGAAACTGAAACTTTTGGCTGAGAATAGTGAACTAGATCAAAAACTTGAGACTGGTGGAAAGAAAGAAGCTGAACTGAGTCGAAAAGTGGAAGATTTGGAAAGAGAGAGAGATAATCTGATTAAGGAGAAAGAGACTAGTCTGAGAAGGATTGAAGATGGAGAAAATATTTCAGCAGACTTGAGAAGTTTGGTTGATCACATGAAAGATGAAAAAGTAATCCTCGAGCAACAGCTAGAATCTCTTAGAGGGGACATCTCAAATATGAAGCATGAGCTGGAATCTTCAGAGCAGCAATTGTCAGATTTAAGCAAAGCTAAGGAGGAAGAAACCTTGAAAGTTTTGGAGATCTCAAGTGAGATTCAGCAGGCACAGAATGTGATACAAGAACTCACAGATGAAGCTAGTCAGCTTAAGGAAAAACTTGATCAGAAGGAGCAGGACCTTGAATCTTTGCAAGGTCAGAAAAGAGATTTGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAGGCACAGGCTGCATGAGAACGAAACATTGGCCCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCTTTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCGGAGGAGAATGCAGGTTTACAAGCTCAAATTTTAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTTGCAGAGGAGAATGCAGGCCTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCTAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATAGAGTATTCAACTCTGTTTGAGAAGCATTCCCTGCATGAGAACGAAACTTTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCTTTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCGGAGGAGAATGCAGGTTTACAAGCTCAAATTTTAGGACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACAATGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGAAACTGGCAAAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCTAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAAGGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATAGAGTATTCAACTCTGTTTGAGAAGCATACCCTGCATGAGAACGAAACTTTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCTTTGCAAAGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCGGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGACAGAGCTGAAATCTGACCTCGAATTTTTGCAAGGCGAGAAAAGAGATGTGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAGCTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTGACAAAGAAACTTCAGGATAGCAATGATGAATCATCGTCTACTATAGCCGATTTGACAGCACAGATCAACAATCTGCTAGCAGACTTAAGTTCTGTGCACCATGAGAAAGTTGAATTGGAGGAAAATATGGCATCTAAAAGTGATGAAGCATCGACTCAGGTCAAGGGCTTAATGGAACAGGTAAATGTATTGCAGCAGCAATTGGAGTCCCTACACAGCCAGAAAGCTGAATTGCAAATGCAGCTTAAGAATAAAACTCAAGAAATTTCAGAGTACTTGATCCAGGTACAAATTCTGAATGAAGAGATAGCAAACAAGACGACGGATCATCAGAAGATTCTGGAAGAGAAAGAGATTTTGATAGCAGAAATGAAAGATCTGAAGCTGAAAGTGGAATCCATGCAGATTCAGAAGAATGAACTTGAAGAGAATATCAGAACGAAAATCCTAGAGCATGATCAGTTGAGAGCAGAAATGTTGGAGCTGAAGGATCAGTTTTCTGTATTTGAGAAGACAATAGCACAAAGAGAGCTAGAATTCTCCTCTCTCCAAGAGAAACATGAAAGTGGACAGAACGAAGCCTCTGCTCAAGTAGTGGCCCTTGTGGCACAGGTTAACGGTCTACAAGAAGAGTTGGAGTCATTGCAAACCCAGAATAAGCAAATGGAGTTGCAGTTTGAGAGGGAAAAACAAGAACTTCTAGAGAGCCTGACACAGTTGCAAACTGATAAGATCGAGTTAACGAGCAAGATCACTGATCTTCAGAGACTGCTTAATGAACAGGAGGATTTATACACCAAGTTAAATGAGGAACATAAACAGCTTGAAGGTAAGTGTCAGGACTACGAGGTTAGCATTGAATCCAAAGATCAGATAATAGCTGATTTGGAACAAATGTCTGAAGACCTGAAAAGAGACCTTGAAGAAAAAGGTGATGAACTTGGTTCTTTGGTAGAGAAATCTCGCAATACTGAAGTTAAGCTCCGTCTGTCAAACCAGAAGCTCCGGGTTACAGAGCAAGTACTGGCCGAGAAGGAACACAACTTCAGAATTGCTGAGCTGAAATTCCAAGAAGAACAAAGAGTGCTCGAAGACAGGATTGCTGCATTGTCTGGTATAATCTCTGCAAACAATGAAGCTTATCAGAGAAACATCAACTGTATTTCAGACAATGTGAACAGTTCTTTGACTGCACTGGAATCTGTGATTAAGAAATTTGTGGATGAGTATGCGAAGTATGAGAAGTGTATTGCTGAAACGTCAGAGCAGCTTCAGACTGCAAAGAAATGGGTTGCGGAAACAAATGATGAGAGAGAGAAGTTGAAGAGGGAGGTGGGGGCCCTAAGCAAACAACTGCAAGATAAAAAAGCGGAAGCATTGGTGTTTAGAGAGAGGGTTGAGAAATTGGAGACAGAGGCGAGCAAGGAACAAGTGGAGAAGGGGGGTCTGATCAAAGCTGTGAATCAGCTTGAAAAGAAGGTAGAGGAGTTGAAGCAGATTGTGGAAGAGAAGAACAAGGGCATATTGGGTCTGGGAGAGGAGAAGCGGGAAGCTATAAGGCAGCTGTGCATATGGATCGAGTATCATCAGAGTCGCTATGATCATCTCAAGGAGGTGCTTTTAAAGATGGCTCCAAGAGGCCAGAGGAGGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2758

Amino Acids

319.02

Weight (kDa)

5.15

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 13 - 88 2.7e-11 KIP1-like protein
KIP1 PF07765 980 - 1050 4.7e-17 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 128
AarI CACCTGC 1 cut(s) 1222
Acc36I ACCTGC 5 cut(s) 1222, 2629, 3995, 4313, 5267
AccI GTMKAC 2 cut(s) 6656, 7240
AccII CGCG 2 cut(s) 1887, 2148
AclI AACGTT 2 cut(s) 482, 1219
AclWI GGATC 9 cut(s) 47, 51, 122, 1026, 2793, 6892, 6951, 7116, 8201
AcoI YGGCCR 1 cut(s) 7644
AfiI CCNNNNNNNGG 8 cut(s) 817, 1080, 1081, 1392, 1393, 1797, 2917, 4204
AflII CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
AhlI ACTAGT 1 cut(s) 3617
AjnI CCWGG 1 cut(s) 6900
AloI GAACNNNNNNTCC 4 cut(s) 276, 308, 2396, 2428
Alw21I GWGCWC 4 cut(s) 2391, 3221, 6717, 7707
Alw44I GTGCAC 1 cut(s) 6713
AlwI GGATC 9 cut(s) 47, 51, 122, 1026, 2793, 6892, 6951, 7116, 8201
AlwNI CAGNNNCTG 3 cut(s) 356, 3227, 7387
ApaI GGGCCC 1 cut(s) 7960
ApaLI GTGCAC 1 cut(s) 6713
Asp700I GAANNNNTTC 2 cut(s) 184, 1815
AspLEI GCGC 8 cut(s) 634, 4516, 4834, 5152, 5470, 5788, 6106, 6424
AsuC2I CCSGG 5 cut(s) 811, 2192, 2458, 3065, 7625
AsuHPI GGTGA 6 cut(s) 679, 1246, 2708, 2738, 2849, 7562
AsuNHI GCTAGC 2 cut(s) 25, 6694
AvaII GGWCC 2 cut(s) 3922, 8268
AxyI CCTNAGG 1 cut(s) 2814
BaeGI GKGCMC 2 cut(s) 6717, 7960
BanII GRGCYC 2 cut(s) 3221, 7960
BauI CACGAG 1 cut(s) 866
BbsI GAAGAC 8 cut(s) 144, 762, 2166, 2663, 3461, 7136, 7527, 7716
Bbv12I GWGCWC 4 cut(s) 2391, 3221, 6717, 7707
BceAI ACGGC 3 cut(s) 2495, 2592, 3378
BcgI CGANNNNNNTGC 4 cut(s) 7184, 7218, 8176, 8210
BciT130I CCWGG 1 cut(s) 6902
BciVI GTATCC 2 cut(s) 1900, 2335
BcnI CCSGG 5 cut(s) 811, 2192, 2458, 3065, 7625
BcuI ACTAGT 1 cut(s) 3617
BfmI CTRYAG 3 cut(s) 1733, 2102, 6660
BfrI CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
BfuAI ACCTGC 5 cut(s) 1222, 2629, 3995, 4313, 5267
BfuI GTATCC 2 cut(s) 1900, 2335
BglI GCCNNNNNGGC 1 cut(s) 7223
BglII AGATCT 3 cut(s) 3040, 3828, 6994
BlpI GCTNAGC 2 cut(s) 2511, 7674
BmcAI AGTACT 3 cut(s) 2806, 6893, 7641
Bme1390I CCNGG 6 cut(s) 811, 2192, 2458, 3065, 6902, 7625
Bme18I GGWCC 2 cut(s) 3922, 8268
BmiI GGNNCC 6 cut(s) 161, 176, 3087, 7957, 7958, 8250
BmrFI CCNGG 6 cut(s) 811, 2192, 2458, 3065, 6902, 7625
BmrI ACTGGG 1 cut(s) 679
BmsI GCATC 6 cut(s) 19, 424, 586, 2944, 6758, 6776
BmtI GCTAGC 2 cut(s) 29, 6698
BmuI ACTGGG 1 cut(s) 679
BoxI GACNNNNGTC 2 cut(s) 1475, 6776
BpiI GAAGAC 8 cut(s) 144, 762, 2166, 2663, 3461, 7136, 7527, 7716
BpmI CTGGAG 3 cut(s) 37, 322, 2254
Bpu10I CCTNAGC 3 cut(s) 1076, 3798, 7961
Bpu1102I GCTNAGC 2 cut(s) 2511, 7674
BpuMI CCSGG 5 cut(s) 811, 2192, 2458, 3065, 7625
Bsa29I ATCGAT 1 cut(s) 2952
BsaBI GATNNNNATC 1 cut(s) 3039
BsaJI CCNNGG 2 cut(s) 142, 2457
BsaXI ACNNNNNCTCC 8 cut(s) 484, 514, 704, 734, 2528, 2558, 7277, 7307
Bsc4I CCNNNNNNNGG 8 cut(s) 817, 1080, 1081, 1392, 1393, 1797, 2917, 4204
Bse21I CCTNAGG 1 cut(s) 2814
Bse3DI GCAATG 8 cut(s) 956, 1059, 4568, 4886, 5522, 5840, 6646, 7259
Bse8I GATNNNNATC 1 cut(s) 3039
BseBI CCWGG 1 cut(s) 6902
BseCI ATCGAT 1 cut(s) 2952
BseDI CCNNGG 2 cut(s) 142, 2457
BseGI GGATG 9 cut(s) 601, 996, 1435, 1807, 1840, 2524, 2680, 2971, 7846
BseJI GATNNNNATC 1 cut(s) 3039
BseLI CCNNNNNNNGG 8 cut(s) 817, 1080, 1081, 1392, 1393, 1797, 2917, 4204
BseMI GCAATG 8 cut(s) 956, 1059, 4568, 4886, 5522, 5840, 6646, 7259
BseSI GKGCMC 2 cut(s) 6717, 7960
BsgI GTGCAG 3 cut(s) 742, 1127, 7794
Bsh1236I CGCG 2 cut(s) 1887, 2148
BshVI ATCGAT 1 cut(s) 2952
BsiHKAI GWGCWC 4 cut(s) 2391, 3221, 6717, 7707
BsiSI CCGG 8 cut(s) 401, 811, 2170, 2191, 2457, 2592, 3065, 7624
BslFI GGGAC 5 cut(s) 661, 1369, 2995, 3746, 6811
BslI CCNNNNNNNGG 8 cut(s) 817, 1080, 1081, 1392, 1393, 1797, 2917, 4204
BsmFI GGGAC 5 cut(s) 661, 1369, 2995, 3746, 6811
Bsp120I GGGCCC 1 cut(s) 7956
Bsp1286I GDGCHC 5 cut(s) 2391, 3221, 6717, 7707, 7960
Bsp1720I GCTNAGC 2 cut(s) 2511, 7674
BspDI ATCGAT 1 cut(s) 2952
BspFNI CGCG 2 cut(s) 1887, 2148
BspHI TCATGA 1 cut(s) 409
BspLI GGNNCC 6 cut(s) 161, 176, 3087, 7957, 7958, 8250
BspMAI CTGCAG 2 cut(s) 1737, 2106
BspMI ACCTGC 5 cut(s) 1222, 2629, 3995, 4313, 5267
BspOI GCTAGC 2 cut(s) 29, 6698
BspPI GGATC 9 cut(s) 47, 51, 122, 1026, 2793, 6892, 6951, 7116, 8201
BspQI GCTCTTC 3 cut(s) 325, 1416, 1821
BspTI CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
BsrDI GCAATG 8 cut(s) 956, 1059, 4568, 4886, 5522, 5840, 6646, 7259
BssECI CCNNGG 2 cut(s) 142, 2457
BssSI CACGAG 1 cut(s) 866
Bst2BI CACGAG 1 cut(s) 866
Bst2UI CCWGG 1 cut(s) 6902
Bst4CI ACNGT 8 cut(s) 72, 237, 1000, 2154, 7238, 7335, 7778, 7799
BstAFI CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
BstAPI GCANNNNNTGC 8 cut(s) 4174, 4492, 4810, 5128, 5446, 5764, 6082, 6400
BstEII GGTNACC 1 cut(s) 2452
BstF5I GGATG 9 cut(s) 601, 996, 1435, 1807, 1840, 2524, 2680, 2971, 7846
BstFNI CGCG 2 cut(s) 1887, 2148
BstHHI GCGC 8 cut(s) 634, 4516, 4834, 5152, 5470, 5788, 6106, 6424
BstNI CCWGG 1 cut(s) 6902
BstNSI RCATGY 3 cut(s) 557, 1732, 2373
BstPAI GACNNNNGTC 2 cut(s) 1475, 6776
BstPI GGTNACC 1 cut(s) 2452
BstSCI CCNGG 6 cut(s) 809, 2190, 2456, 3063, 6900, 7623
BstSFI CTRYAG 3 cut(s) 1733, 2102, 6660
BstSLI GKGCMC 2 cut(s) 6717, 7960
BstUI CGCG 2 cut(s) 1887, 2148
BstV2I GAAGAC 8 cut(s) 144, 762, 2166, 2663, 3461, 7136, 7527, 7716
BstX2I RGATCY 4 cut(s) 114, 3040, 3828, 6994
BstXI CCANNNNNNTGG 2 cut(s) 692, 3067
BstYI RGATCY 4 cut(s) 114, 3040, 3828, 6994
Bsu15I ATCGAT 1 cut(s) 2952
Bsu36I CCTNAGG 1 cut(s) 2814
BsuI GTATCC 2 cut(s) 1900, 2335
BsuTUI ATCGAT 1 cut(s) 2952
BtgZI GCGATG 1 cut(s) 3419
BtsCI GGATG 9 cut(s) 601, 996, 1435, 1807, 1840, 2524, 2680, 2971, 7846
BtsI GCAGTG 1 cut(s) 1544
BtsIMutI CAGTG 5 cut(s) 539, 1544, 1722, 7371, 7811
BveI ACCTGC 5 cut(s) 1222, 2629, 3995, 4313, 5267
CaiI CAGNNNCTG 3 cut(s) 356, 3227, 7387
CciI TCATGA 1 cut(s) 409
CfoI GCGC 8 cut(s) 634, 4516, 4834, 5152, 5470, 5788, 6106, 6424
ClaI ATCGAT 1 cut(s) 2952
CseI GACGC 2 cut(s) 521, 2477
DraI TTTAAA 2 cut(s) 837, 8241
EaeI YGGCCR 1 cut(s) 7644
EciI GGCGGA 4 cut(s) 1334, 4325, 5279, 6233
Ecl136II GAGCTC 1 cut(s) 3219
Eco147I AGGCCT 1 cut(s) 4644
Eco24I GRGCYC 2 cut(s) 3221, 7960
Eco47I GGWCC 2 cut(s) 3922, 8268
Eco53kI GAGCTC 1 cut(s) 3219
Eco81I CCTNAGG 1 cut(s) 2814
Eco91I GGTNACC 1 cut(s) 2452
EcoICRI GAGCTC 1 cut(s) 3219
EcoO109I RGGNCCY 4 cut(s) 3922, 7956, 7957, 8268
EcoO65I GGTNACC 1 cut(s) 2452
EcoRI GAATTC 1 cut(s) 7154
EcoRII CCWGG 1 cut(s) 6900
EcoT22I ATGCAT 2 cut(s) 256, 1314
EcoT38I GRGCYC 2 cut(s) 3221, 7960
FaqI GGGAC 5 cut(s) 661, 1369, 2995, 3746, 6811
FauI CCCGC 1 cut(s) 8157
FauNDI CATATG 1 cut(s) 8189
FblI GTMKAC 2 cut(s) 6656, 7240
FokI GGATG 9 cut(s) 608, 1003, 1442, 1814, 1847, 2531, 2687, 2978, 7853
FriOI GRGCYC 2 cut(s) 3221, 7960
GlaI GCGC 8 cut(s) 633, 4515, 4833, 5151, 5469, 5787, 6105, 6423
GsuI CTGGAG 3 cut(s) 37, 322, 2254
HapII CCGG 8 cut(s) 401, 811, 2170, 2191, 2457, 2592, 3065, 7624
HgaI GACGC 2 cut(s) 521, 2477
HhaI GCGC 8 cut(s) 634, 4516, 4834, 5152, 5470, 5788, 6106, 6424
Hin6I GCGC 8 cut(s) 632, 4514, 4832, 5150, 5468, 5786, 6104, 6422
HinP1I GCGC 8 cut(s) 632, 4514, 4832, 5150, 5468, 5786, 6104, 6422
HincII GTYRAC 3 cut(s) 1366, 7234, 7359
HindII GTYRAC 3 cut(s) 1366, 7234, 7359
HindIII AAGCTT 5 cut(s) 122, 1443, 2282, 3023, 7755
HpaI GTTAAC 2 cut(s) 7234, 7359
HpaII CCGG 8 cut(s) 401, 811, 2170, 2191, 2457, 2592, 3065, 7624
HphI GGTGA 6 cut(s) 679, 1246, 2708, 2738, 2849, 7562
Hpy99I CGWCG 1 cut(s) 6943
HpyCH4III ACNGT 8 cut(s) 72, 237, 1000, 2154, 7238, 7335, 7778, 7799
HpyCH4IV ACGT 3 cut(s) 482, 1219, 7877
HpySE526I ACGT 3 cut(s) 482, 1219, 7877
HspAI GCGC 8 cut(s) 632, 4514, 4832, 5150, 5468, 5786, 6104, 6422
KspAI GTTAAC 2 cut(s) 7234, 7359
LguI GCTCTTC 3 cut(s) 325, 1416, 1821
LweI GCATC 6 cut(s) 19, 424, 586, 2944, 6758, 6776
MaeII ACGT 3 cut(s) 482, 1219, 7877
MaeIII GTNAC 8 cut(s) 106, 243, 1935, 2452, 2945, 3281, 6448, 7627
MfeI CAATTG 3 cut(s) 3369, 3776, 6818
MflI RGATCY 4 cut(s) 114, 3040, 3828, 6994
MhlI GDGCHC 5 cut(s) 2391, 3221, 6717, 7707, 7960
MmeI TCCRAC 8 cut(s) 190, 1479, 1755, 1884, 1911, 3084, 7077, 7233
Mph1103I ATGCAT 2 cut(s) 256, 1314
MroXI GAANNNNTTC 2 cut(s) 184, 1815
MslI CAYNNNNRTG 4 cut(s) 558, 1727, 2952, 7182
MspA1I CMGCKG 4 cut(s) 1624, 2515, 6532, 8182
MspCI CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
MspI CCGG 8 cut(s) 401, 811, 2170, 2191, 2457, 2592, 3065, 7624
MspR9I CCNGG 6 cut(s) 811, 2192, 2458, 3065, 6902, 7625
MunI CAATTG 3 cut(s) 3369, 3776, 6818
MvaI CCWGG 1 cut(s) 6902
MvnI CGCG 2 cut(s) 1887, 2148
NciI CCSGG 5 cut(s) 811, 2192, 2458, 3065, 7625
NdeI CATATG 1 cut(s) 8189
NheI GCTAGC 2 cut(s) 25, 6694
NlaIV GGNNCC 6 cut(s) 161, 176, 3087, 7957, 7958, 8250
NmeAIII GCCGAG 1 cut(s) 7672
NmuCI GTSAC 5 cut(s) 106, 243, 2945, 3281, 6448
NsiI ATGCAT 2 cut(s) 256, 1314
NspI RCATGY 3 cut(s) 557, 1732, 2373
PagI TCATGA 1 cut(s) 409
PaqCI CACCTGC 1 cut(s) 1222
PceI AGGCCT 1 cut(s) 4644
PciSI GCTCTTC 3 cut(s) 325, 1416, 1821
PcsI WCGNNNNNNNCGW 1 cut(s) 2485
PdmI GAANNNNTTC 2 cut(s) 184, 1815
PflFI GACNNNGTC 1 cut(s) 2165
PpuMI RGGWCCY 2 cut(s) 3922, 8268
PshAI GACNNNNGTC 2 cut(s) 1475, 6776
PsiI TTATAA 1 cut(s) 128
Psp124BI GAGCTC 1 cut(s) 3221
Psp1406I AACGTT 2 cut(s) 482, 1219
Psp5II RGGWCCY 2 cut(s) 3922, 8268
Psp6I CCWGG 1 cut(s) 6900
PspEI GGTNACC 1 cut(s) 2452
PspGI CCWGG 1 cut(s) 6900
PspN4I GGNNCC 6 cut(s) 161, 176, 3087, 7957, 7958, 8250
PspOMI GGGCCC 1 cut(s) 7956
PspPPI RGGWCCY 2 cut(s) 3922, 8268
PspXI VCTCGAGB 9 cut(s) 824, 3704, 4244, 4562, 4880, 5198, 5516, 5834, 6152
PstI CTGCAG 2 cut(s) 1737, 2106
PstNI CAGNNNCTG 3 cut(s) 356, 3227, 7387
PsuI RGATCY 4 cut(s) 114, 3040, 3828, 6994
PsyI GACNNNGTC 1 cut(s) 2165
PvuII CAGCTG 3 cut(s) 2515, 6532, 8182
RseI CAYNNNNRTG 4 cut(s) 558, 1727, 2952, 7182
SacI GAGCTC 1 cut(s) 3221
SapI GCTCTTC 3 cut(s) 325, 1416, 1821
ScaI AGTACT 3 cut(s) 2806, 6893, 7641
ScrFI CCNGG 6 cut(s) 811, 2192, 2458, 3065, 6902, 7625
SduI GDGCHC 5 cut(s) 2391, 3221, 6717, 7707, 7960
SfaNI GCATC 6 cut(s) 19, 424, 586, 2944, 6758, 6776
SfcI CTRYAG 3 cut(s) 1733, 2102, 6660
SinI GGWCC 2 cut(s) 3922, 8268
SmiMI CAYNNNNRTG 4 cut(s) 558, 1727, 2952, 7182
SpeI ACTAGT 1 cut(s) 3617
SseBI AGGCCT 1 cut(s) 4644
SspI AATATT 4 cut(s) 530, 3018, 3239, 3649
SstI GAGCTC 1 cut(s) 3221
StuI AGGCCT 1 cut(s) 4644
StyD4I CCNGG 6 cut(s) 809, 2190, 2456, 3063, 6900, 7623
TaaI ACNGT 8 cut(s) 72, 237, 1000, 2154, 7238, 7335, 7778, 7799
TaiI ACGT 3 cut(s) 485, 1222, 7880
TaqII GACCGA 2 cut(s) 1805, 1994
TatI WGTACW 4 cut(s) 550, 2804, 6891, 7639
TscAI CASTG 5 cut(s) 546, 1544, 1729, 7378, 7818
TseFI GTSAC 5 cut(s) 106, 243, 2945, 3281, 6448
Tsp45I GTSAC 5 cut(s) 106, 243, 2945, 3281, 6448
TspGWI ACGGA 3 cut(s) 1495, 6956, 7592
TspRI CASTG 5 cut(s) 546, 1544, 1729, 7378, 7818
Tth111I GACNNNGTC 1 cut(s) 2165
Vha464I CTTAAG 5 cut(s) 1226, 2768, 3893, 6703, 6863
VneI GTGCAC 1 cut(s) 6713
VpaK11BI GGWCC 2 cut(s) 3922, 8268
XbaI TCTAGA 2 cut(s) 3331, 7318
XceI RCATGY 3 cut(s) 557, 1732, 2373
XmiI GTMKAC 2 cut(s) 6656, 7240
XmnI GAANNNNTTC 2 cut(s) 184, 1815
ZrmI AGTACT 3 cut(s) 2806, 6893, 7641
Zsp2I ATGCAT 2 cut(s) 256, 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.