Intracellular protein transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64330 AT5G41790 AT5G41790 |
| fragaria_vesca | FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 |
| malus_domestica | MD06G1102300.v1.1 MD14G1121500.v1.1 |
| prunus_persica | Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 |
| pyrus_communis | pycom06g09710 |
| rosa_chinensis | RchiOBHm_Chr7g0195431 |
| rosa_laevigata | RLG00000004121 |
| rosa_multiflora | Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00260490 |
| rosa_rugosa | Rorug07G0023200 |
| rosa_samantha | Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700 |
| rosa_wichuraiana | Rw7G012850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 128 |
| AarI | CACCTGC | 1 cut(s) | 1204 |
| Acc36I | ACCTGC | 6 cut(s) | 1204, 2611, 3977, 4295, 5249, 5567 |
| AccI | GTMKAC | 2 cut(s) | 5684, 6268 |
| AccII | CGCG | 1 cut(s) | 2130 |
| AciI | CCGC | 5 cut(s) | 420, 2128, 2737, 2893, 6941 |
| AclI | AACGTT | 2 cut(s) | 467, 1201 |
| AclWI | GGATC | 9 cut(s) | 47, 51, 122, 1008, 2775, 5920, 5979, 6144, 7229 |
| AcoI | YGGCCR | 1 cut(s) | 975 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 799, 1062, 1063, 1374, 1375, 1779, 2899, 7294 |
| AflII | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| AhlI | ACTAGT | 2 cut(s) | 3599, 3866 |
| AjnI | CCWGG | 2 cut(s) | 2773, 5928 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 261, 293, 2378, 2410 |
| Alw21I | GWGCWC | 3 cut(s) | 2373, 3203, 6735 |
| AlwI | GGATC | 9 cut(s) | 47, 51, 122, 1008, 2775, 5920, 5979, 6144, 7229 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 341, 3209, 6415 |
| Ama87I | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| ApaI | GGGCCC | 1 cut(s) | 6988 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 169, 1797 |
| AspLEI | GCGC | 6 cut(s) | 616, 4180, 4816, 5134, 5452, 5745 |
| AspS9I | GGNCC | 9 cut(s) | 629, 3904, 4222, 4540, 4858, 5176, 6244, 6984, 6985 |
| AsuC2I | CCSGG | 4 cut(s) | 793, 2174, 3047, 6653 |
| AsuHPI | GGTGA | 8 cut(s) | 661, 1228, 2690, 2720, 2831, 3275, 4273, 6590 |
| AsuNHI | GCTAGC | 2 cut(s) | 25, 5722 |
| AvaI | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| AvaII | GGWCC | 1 cut(s) | 3904 |
| AxyI | CCTNAGG | 1 cut(s) | 2796 |
| BaeGI | GKGCMC | 1 cut(s) | 6988 |
| BalI | TGGCCA | 1 cut(s) | 977 |
| BanII | GRGCYC | 2 cut(s) | 3203, 6988 |
| BauI | CACGAG | 1 cut(s) | 848 |
| Bbv12I | GWGCWC | 3 cut(s) | 2373, 3203, 6735 |
| BceAI | ACGGC | 3 cut(s) | 2477, 3360, 5730 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 6212, 6246, 7204, 7238 |
| BciT130I | CCWGG | 2 cut(s) | 2775, 5930 |
| BciVI | GTATCC | 2 cut(s) | 1882, 2317 |
| BclI | TGATCA | 9 cut(s) | 247, 1615, 1984, 3130, 3658, 3889, 6103, 7095, 7246 |
| BcnI | CCSGG | 4 cut(s) | 793, 2174, 3047, 6653 |
| BcuI | ACTAGT | 2 cut(s) | 3599, 3866 |
| BfmI | CTRYAG | 3 cut(s) | 1715, 2084, 5688 |
| BfrI | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| BfuAI | ACCTGC | 6 cut(s) | 1204, 2611, 3977, 4295, 5249, 5567 |
| BfuI | GTATCC | 2 cut(s) | 1882, 2317 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 6251 |
| BglII | AGATCT | 3 cut(s) | 3022, 3810, 6022 |
| BlpI | GCTNAGC | 2 cut(s) | 2493, 6702 |
| BmcAI | AGTACT | 3 cut(s) | 2788, 5921, 6669 |
| Bme1390I | CCNGG | 6 cut(s) | 793, 2174, 2775, 3047, 5930, 6653 |
| Bme18I | GGWCC | 1 cut(s) | 3904 |
| BmeT110I | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| BmgT120I | GGNCC | 9 cut(s) | 629, 3904, 4222, 4540, 4858, 5176, 6244, 6984, 6985 |
| BmiI | GGNNCC | 5 cut(s) | 161, 3069, 6985, 6986, 7278 |
| BmrFI | CCNGG | 6 cut(s) | 793, 2174, 2775, 3047, 5930, 6653 |
| BmrI | ACTGGG | 2 cut(s) | 1072, 3548 |
| BmsI | GCATC | 5 cut(s) | 19, 409, 2926, 5786, 5804 |
| BmtI | GCTAGC | 2 cut(s) | 29, 5726 |
| BmuI | ACTGGG | 2 cut(s) | 1072, 3548 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5804 |
| BpmI | CTGGAG | 5 cut(s) | 37, 307, 1481, 2236, 5417 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3780, 6989 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2493, 6702 |
| BpuEI | CTTGAG | 9 cut(s) | 3530, 3664, 3799, 4724, 5042, 5360, 5912, 6219, 7238 |
| BpuMI | CCSGG | 4 cut(s) | 793, 2174, 3047, 6653 |
| Bsa29I | ATCGAT | 1 cut(s) | 2934 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3021 |
| BsaI | GGTCTC | 7 cut(s) | 788, 1046, 4067, 4385, 4703, 5021, 6555 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 799, 1062, 1063, 1374, 1375, 1779, 2899, 7294 |
| Bse21I | CCTNAGG | 1 cut(s) | 2796 |
| Bse3DI | GCAATG | 8 cut(s) | 938, 1041, 2562, 4550, 4868, 5186, 5674, 6287 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3021 |
| BseBI | CCWGG | 2 cut(s) | 2775, 5930 |
| BseCI | ATCGAT | 1 cut(s) | 2934 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 9 cut(s) | 583, 978, 1417, 1789, 1822, 2506, 2662, 2953, 6874 |
| BseJI | GATNNNNATC | 1 cut(s) | 3021 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 799, 1062, 1063, 1374, 1375, 1779, 2899, 7294 |
| BseMI | GCAATG | 8 cut(s) | 938, 1041, 2562, 4550, 4868, 5186, 5674, 6287 |
| BseSI | GKGCMC | 1 cut(s) | 6988 |
| BsgI | GTGCAG | 5 cut(s) | 724, 1043, 1109, 5906, 6822 |
| Bsh1236I | CGCG | 1 cut(s) | 2130 |
| BshVI | ATCGAT | 1 cut(s) | 2934 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2373, 3203, 6735 |
| BsiHKCI | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| BsiSI | CCGG | 8 cut(s) | 330, 386, 793, 2152, 2173, 2574, 3047, 6652 |
| BslFI | GGGAC | 4 cut(s) | 1351, 2977, 3728, 5839 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 799, 1062, 1063, 1374, 1375, 1779, 2899, 7294 |
| BsmFI | GGGAC | 4 cut(s) | 1351, 2977, 3728, 5839 |
| BsmI | GAATGC | 7 cut(s) | 1814, 3988, 4306, 4624, 4942, 5260, 5578 |
| Bso31I | GGTCTC | 7 cut(s) | 788, 1046, 4067, 4385, 4703, 5021, 6555 |
| BsoBI | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| Bsp120I | GGGCCC | 1 cut(s) | 6984 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2373, 3203, 6735, 6988 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2493, 6702 |
| BspACI | CCGC | 5 cut(s) | 420, 2128, 2737, 2893, 6941 |
| BspDI | ATCGAT | 1 cut(s) | 2934 |
| BspFNI | CGCG | 1 cut(s) | 2130 |
| BspHI | TCATGA | 2 cut(s) | 394, 427 |
| BspLI | GGNNCC | 5 cut(s) | 161, 3069, 6985, 6986, 7278 |
| BspMAI | CTGCAG | 2 cut(s) | 1719, 2088 |
| BspMI | ACCTGC | 6 cut(s) | 1204, 2611, 3977, 4295, 5249, 5567 |
| BspOI | GCTAGC | 2 cut(s) | 29, 5726 |
| BspPI | GGATC | 9 cut(s) | 47, 51, 122, 1008, 2775, 5920, 5979, 6144, 7229 |
| BspQI | GCTCTTC | 4 cut(s) | 310, 1398, 1496, 1803 |
| BspTI | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| BspTNI | GGTCTC | 7 cut(s) | 788, 1046, 4067, 4385, 4703, 5021, 6555 |
| BsrDI | GCAATG | 8 cut(s) | 938, 1041, 2562, 4550, 4868, 5186, 5674, 6287 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssSI | CACGAG | 1 cut(s) | 848 |
| Bst2BI | CACGAG | 1 cut(s) | 848 |
| Bst2UI | CCWGG | 2 cut(s) | 2775, 5930 |
| BstAFI | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 4156, 4474, 4792, 5110, 5428 |
| BstF5I | GGATG | 9 cut(s) | 583, 978, 1417, 1789, 1822, 2506, 2662, 2953, 6874 |
| BstFNI | CGCG | 1 cut(s) | 2130 |
| BstHHI | GCGC | 6 cut(s) | 616, 4180, 4816, 5134, 5452, 5745 |
| BstNI | CCWGG | 2 cut(s) | 2775, 5930 |
| BstNSI | RCATGY | 2 cut(s) | 542, 2355 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5804 |
| BstSCI | CCNGG | 6 cut(s) | 791, 2172, 2773, 3045, 5928, 6651 |
| BstSFI | CTRYAG | 3 cut(s) | 1715, 2084, 5688 |
| BstSLI | GKGCMC | 1 cut(s) | 6988 |
| BstUI | CGCG | 1 cut(s) | 2130 |
| BstX2I | RGATCY | 5 cut(s) | 114, 2780, 3022, 3810, 6022 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3049 |
| BstYI | RGATCY | 5 cut(s) | 114, 2780, 3022, 3810, 6022 |
| Bsu15I | ATCGAT | 1 cut(s) | 2934 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2796 |
| BsuI | GTATCC | 2 cut(s) | 1882, 2317 |
| BsuTUI | ATCGAT | 1 cut(s) | 2934 |
| BtsCI | GGATG | 9 cut(s) | 583, 978, 1417, 1789, 1822, 2506, 2662, 2953, 6874 |
| BtsI | GCAGTG | 2 cut(s) | 1526, 5108 |
| BtsIMutI | CAGTG | 9 cut(s) | 524, 978, 1060, 1526, 1704, 4439, 5108, 6399, 6839 |
| BveI | ACCTGC | 6 cut(s) | 1204, 2611, 3977, 4295, 5249, 5567 |
| CaiI | CAGNNNCTG | 3 cut(s) | 341, 3209, 6415 |
| CciI | TCATGA | 2 cut(s) | 394, 427 |
| CfoI | GCGC | 6 cut(s) | 616, 4180, 4816, 5134, 5452, 5745 |
| Cfr13I | GGNCC | 9 cut(s) | 629, 3904, 4222, 4540, 4858, 5176, 6244, 6984, 6985 |
| ClaI | ATCGAT | 1 cut(s) | 2934 |
| CseI | GACGC | 2 cut(s) | 506, 2459 |
| DraI | TTTAAA | 2 cut(s) | 819, 7269 |
| EaeI | YGGCCR | 1 cut(s) | 975 |
| Ecl136II | GAGCTC | 1 cut(s) | 3201 |
| Eco147I | AGGCCT | 1 cut(s) | 2773 |
| Eco24I | GRGCYC | 2 cut(s) | 3203, 6988 |
| Eco31I | GGTCTC | 7 cut(s) | 788, 1046, 4067, 4385, 4703, 5021, 6555 |
| Eco32I | GATATC | 1 cut(s) | 6079 |
| Eco47I | GGWCC | 1 cut(s) | 3904 |
| Eco53kI | GAGCTC | 1 cut(s) | 3201 |
| Eco81I | CCTNAGG | 1 cut(s) | 2796 |
| Eco88I | CYCGRG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| EcoICRI | GAGCTC | 1 cut(s) | 3201 |
| EcoO109I | RGGNCCY | 3 cut(s) | 3904, 6984, 6985 |
| EcoRI | GAATTC | 1 cut(s) | 6182 |
| EcoRII | CCWGG | 2 cut(s) | 2773, 5928 |
| EcoRV | GATATC | 1 cut(s) | 6079 |
| EcoT22I | ATGCAT | 2 cut(s) | 241, 1296 |
| EcoT38I | GRGCYC | 2 cut(s) | 3203, 6988 |
| FaqI | GGGAC | 4 cut(s) | 1351, 2977, 3728, 5839 |
| FauNDI | CATATG | 1 cut(s) | 7217 |
| FbaI | TGATCA | 9 cut(s) | 247, 1615, 1984, 3130, 3658, 3889, 6103, 7095, 7246 |
| FblI | GTMKAC | 2 cut(s) | 5684, 6268 |
| FokI | GGATG | 9 cut(s) | 590, 985, 1424, 1796, 1829, 2513, 2669, 2960, 6881 |
| FriOI | GRGCYC | 2 cut(s) | 3203, 6988 |
| GlaI | GCGC | 6 cut(s) | 615, 4179, 4815, 5133, 5451, 5744 |
| GsuI | CTGGAG | 5 cut(s) | 37, 307, 1481, 2236, 5417 |
| HapII | CCGG | 8 cut(s) | 330, 386, 793, 2152, 2173, 2574, 3047, 6652 |
| HgaI | GACGC | 2 cut(s) | 506, 2459 |
| HhaI | GCGC | 6 cut(s) | 616, 4180, 4816, 5134, 5452, 5745 |
| Hin6I | GCGC | 6 cut(s) | 614, 4178, 4814, 5132, 5450, 5743 |
| HinP1I | GCGC | 6 cut(s) | 614, 4178, 4814, 5132, 5450, 5743 |
| HincII | GTYRAC | 3 cut(s) | 1348, 6262, 6387 |
| HindII | GTYRAC | 3 cut(s) | 1348, 6262, 6387 |
| HindIII | AAGCTT | 6 cut(s) | 122, 1425, 2264, 3005, 6626, 6783 |
| HpaI | GTTAAC | 2 cut(s) | 6262, 6387 |
| HpaII | CCGG | 8 cut(s) | 330, 386, 793, 2152, 2173, 2574, 3047, 6652 |
| HphI | GGTGA | 8 cut(s) | 661, 1228, 2690, 2720, 2831, 3275, 4273, 6590 |
| Hpy99I | CGWCG | 2 cut(s) | 2453, 5971 |
| HpyCH4IV | ACGT | 2 cut(s) | 467, 1201 |
| HpySE526I | ACGT | 2 cut(s) | 467, 1201 |
| HspAI | GCGC | 6 cut(s) | 614, 4178, 4814, 5132, 5450, 5743 |
| Ksp22I | TGATCA | 9 cut(s) | 247, 1615, 1984, 3130, 3658, 3889, 6103, 7095, 7246 |
| KspAI | GTTAAC | 2 cut(s) | 6262, 6387 |
| LguI | GCTCTTC | 4 cut(s) | 310, 1398, 1496, 1803 |
| LweI | GCATC | 5 cut(s) | 19, 409, 2926, 5786, 5804 |
| MaeII | ACGT | 2 cut(s) | 467, 1201 |
| MaeIII | GTNAC | 9 cut(s) | 106, 228, 1917, 2434, 2927, 3263, 5476, 6578, 6655 |
| MfeI | CAATTG | 2 cut(s) | 3351, 5846 |
| MflI | RGATCY | 5 cut(s) | 114, 2780, 3022, 3810, 6022 |
| MhlI | GDGCHC | 4 cut(s) | 2373, 3203, 6735, 6988 |
| MlsI | TGGCCA | 1 cut(s) | 977 |
| MluNI | TGGCCA | 1 cut(s) | 977 |
| MmeI | TCCRAC | 9 cut(s) | 175, 1461, 1737, 1866, 1893, 3066, 6105, 6261, 7032 |
| Mox20I | TGGCCA | 1 cut(s) | 977 |
| Mph1103I | ATGCAT | 2 cut(s) | 241, 1296 |
| MroXI | GAANNNNTTC | 2 cut(s) | 169, 1797 |
| MscI | TGGCCA | 1 cut(s) | 977 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1709, 2934, 6210 |
| Msp20I | TGGCCA | 1 cut(s) | 977 |
| MspA1I | CMGCKG | 3 cut(s) | 420, 2497, 7210 |
| MspCI | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| MspI | CCGG | 8 cut(s) | 330, 386, 793, 2152, 2173, 2574, 3047, 6652 |
| MspR9I | CCNGG | 6 cut(s) | 793, 2174, 2775, 3047, 5930, 6653 |
| MunI | CAATTG | 2 cut(s) | 3351, 5846 |
| Mva1269I | GAATGC | 7 cut(s) | 1814, 3988, 4306, 4624, 4942, 5260, 5578 |
| MvaI | CCWGG | 2 cut(s) | 2775, 5930 |
| MvnI | CGCG | 1 cut(s) | 2130 |
| NciI | CCSGG | 4 cut(s) | 793, 2174, 3047, 6653 |
| NdeI | CATATG | 1 cut(s) | 7217 |
| NheI | GCTAGC | 2 cut(s) | 25, 5722 |
| NlaIV | GGNNCC | 5 cut(s) | 161, 3069, 6985, 6986, 7278 |
| NmuCI | GTSAC | 6 cut(s) | 106, 228, 2927, 3263, 5476, 6578 |
| NsiI | ATGCAT | 2 cut(s) | 241, 1296 |
| NspI | RCATGY | 2 cut(s) | 542, 2355 |
| PaeR7I | CTCGAG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| PagI | TCATGA | 2 cut(s) | 394, 427 |
| PaqCI | CACCTGC | 1 cut(s) | 1204 |
| PceI | AGGCCT | 1 cut(s) | 2773 |
| PciSI | GCTCTTC | 4 cut(s) | 310, 1398, 1496, 1803 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2467 |
| PctI | GAATGC | 7 cut(s) | 1814, 3988, 4306, 4624, 4942, 5260, 5578 |
| PdmI | GAANNNNTTC | 2 cut(s) | 169, 1797 |
| PflFI | GACNNNGTC | 1 cut(s) | 2147 |
| PpuMI | RGGWCCY | 1 cut(s) | 3904 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5804 |
| PsiI | TTATAA | 1 cut(s) | 128 |
| Psp124BI | GAGCTC | 1 cut(s) | 3203 |
| Psp1406I | AACGTT | 2 cut(s) | 467, 1201 |
| Psp5II | RGGWCCY | 1 cut(s) | 3904 |
| Psp6I | CCWGG | 2 cut(s) | 2773, 5928 |
| PspGI | CCWGG | 2 cut(s) | 2773, 5928 |
| PspN4I | GGNNCC | 5 cut(s) | 161, 3069, 6985, 6986, 7278 |
| PspOMI | GGGCCC | 1 cut(s) | 6984 |
| PspPI | GGNCC | 9 cut(s) | 629, 3904, 4222, 4540, 4858, 5176, 6244, 6984, 6985 |
| PspPPI | RGGWCCY | 1 cut(s) | 3904 |
| PspXI | VCTCGAGB | 5 cut(s) | 806, 3686, 4544, 4862, 5180 |
| PstI | CTGCAG | 2 cut(s) | 1719, 2088 |
| PstNI | CAGNNNCTG | 3 cut(s) | 341, 3209, 6415 |
| PsuI | RGATCY | 5 cut(s) | 114, 2780, 3022, 3810, 6022 |
| PsyI | GACNNNGTC | 1 cut(s) | 2147 |
| PvuII | CAGCTG | 2 cut(s) | 2497, 7210 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1709, 2934, 6210 |
| SacI | GAGCTC | 1 cut(s) | 3203 |
| SapI | GCTCTTC | 4 cut(s) | 310, 1398, 1496, 1803 |
| Sau96I | GGNCC | 9 cut(s) | 629, 3904, 4222, 4540, 4858, 5176, 6244, 6984, 6985 |
| ScaI | AGTACT | 3 cut(s) | 2788, 5921, 6669 |
| ScrFI | CCNGG | 6 cut(s) | 793, 2174, 2775, 3047, 5930, 6653 |
| SduI | GDGCHC | 4 cut(s) | 2373, 3203, 6735, 6988 |
| SfaNI | GCATC | 5 cut(s) | 19, 409, 2926, 5786, 5804 |
| SfcI | CTRYAG | 3 cut(s) | 1715, 2084, 5688 |
| Sfr274I | CTCGAG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| SinI | GGWCC | 1 cut(s) | 3904 |
| SlaI | CTCGAG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1709, 2934, 6210 |
| SpeI | ACTAGT | 2 cut(s) | 3599, 3866 |
| SseBI | AGGCCT | 1 cut(s) | 2773 |
| SsiI | CCGC | 5 cut(s) | 420, 2128, 2737, 2893, 6941 |
| SspI | AATATT | 4 cut(s) | 515, 3000, 3221, 3631 |
| SstI | GAGCTC | 1 cut(s) | 3203 |
| StuI | AGGCCT | 1 cut(s) | 2773 |
| StyD4I | CCNGG | 6 cut(s) | 791, 2172, 2773, 3045, 5928, 6651 |
| TaiI | ACGT | 2 cut(s) | 470, 1204 |
| TaqII | GACCGA | 2 cut(s) | 1787, 1976 |
| TatI | WGTACW | 4 cut(s) | 535, 2786, 5919, 6667 |
| TscAI | CASTG | 9 cut(s) | 531, 985, 1067, 1526, 1711, 4439, 5115, 6406, 6846 |
| TseFI | GTSAC | 6 cut(s) | 106, 228, 2927, 3263, 5476, 6578 |
| Tsp45I | GTSAC | 6 cut(s) | 106, 228, 2927, 3263, 5476, 6578 |
| TspGWI | ACGGA | 1 cut(s) | 5984 |
| TspRI | CASTG | 9 cut(s) | 531, 985, 1067, 1526, 1711, 4439, 5115, 6406, 6846 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2147 |
| Vha464I | CTTAAG | 5 cut(s) | 1208, 2750, 3875, 5731, 6026 |
| VpaK11BI | GGWCC | 1 cut(s) | 3904 |
| XbaI | TCTAGA | 2 cut(s) | 3313, 6346 |
| XceI | RCATGY | 2 cut(s) | 542, 2355 |
| XhoI | CTCGAG | 7 cut(s) | 806, 2612, 3686, 4544, 4862, 5180, 5904 |
| XmiI | GTMKAC | 2 cut(s) | 5684, 6268 |
| XmnI | GAANNNNTTC | 2 cut(s) | 169, 1797 |
| ZrmI | AGTACT | 3 cut(s) | 2788, 5921, 6669 |
| Zsp2I | ATGCAT | 2 cut(s) | 241, 1296 |