Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004928

Physical Location & Seq

Genomic Coordinates Forward (+)

2434121 .. 2440852

Gene Structure 6732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g04072.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4377 bp

ATGAAAAAGCACCGCTTCCGGGATTCTATGAAGTCCTTGTTTGGAAGTCACATCGACGCTGAGAAGGATGAACGGCGCAAAGGGACTAAAATAGTAAATAGAATGCTGAAGCTTCTAAAAGATGACGATCTAGAAGAAAAGGATAACAATCTGGTGGACGTCTCCAAAAAGGAACCACTTGCAGAGCTAATTCAGGATTTCCACAAACAATACCAGTCCCTCTATGCAGAATATGATCATCTAACAGGAGTGCTAAAGAAAAAAGTTCGTGATAAGCAAGATAATGATAGCAGTTCTTCATCAAGCTCAGAGTCTGATTCCGAATATTCTTCAAATGACAAGAAAAGCAAAAATGGACTGTTGGAAAGTGATGTCAAACAAGAACTCGAATCAGCACATCTAGAAGTTGCTGACCTGAAGAAGAAACTGACGGCTACAGTTGAAGAAAAAGAGGCTTTAAGCTTGGAATATGCTATGGCTTTAAGCAAGATAGAGGAAACAGAGAAGATTTCCAAAGATATGAAGACTGACGCTGAAAGATTAGATGCTGAAAAATTGAAACTTTTGGCTGAGAATAGTGAGCTAAATCAAAAGCTTGAAGCTGGTGAAAAGAAAGAAGCTGAACTGAGTCGACAAGTGGAAGATATGGAAAGGGAGAGAAATATTTTGATGAAGGAGAAAGAGACTGGTCTGAGAAGGATTGAAGATGCAGAAAAGAATTCAGCAGACTTGAGAAGTTTGGTTGATCAGCTGAATGATGAAAAAGTAACCCTTGAGCAACAACTAGAGTCTGTTAGAGGGGACATCTCAAATATGAAGCAAGAGGTGGAATCTTCAGAACAGCAAGTGTCAGATTTAAGCAAAGCTAAGGAGGAAGAAACCTTGAAAGTTTTGGAGATCAAAAGTGAGATTCATCAGGCACAGAATGTGATACAAGAACTCACTGATGAAGCTAGTCAGCTTAAGGAGAAACTCGATCTGAAGGAGCTGGACCTTGAATCTTTGCAAGGTCAGAAAAGAGATTTGGAAGTGAAGTTTGAGACCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCGAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACGAAGAAAATTGAGGAGACCTATAGTGAACATAGTCAGGTACAGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAGGCACAGGCTGCATCAGGACGAAACATTGGCACAAATAAAGGGATGGGAGGATAAAGTAACAGAGCTGGAATCAGTTCTCGAGTCTTTGCAAGGCGAGAAAAGAGATATGGAAGTGAAGTCTGAGAGCAAAGAAAAGCAACTGGTAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTGGAATCATTGTCAAAAGAGAAAGAAGCTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATGGACAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCCACTCTGTCTGAGAGGCACAGGCTGCATCAGGACGAAACATTGGCACAAATAAAGGGATTGGAGGATAAAGTAACAGAGCTGGAATCAGTCCTCGAGTCTTTGCAAGGCGAGAAAAGAGATATGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGTAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTGGAATCATTGTCAAAAGAGAAAGAAGCTGAACTTTCTGCTCTCACGGAGAAATTTGAGGAGACCAATAATGAACATGGACAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAAGCCTGTCTGAGAGGCACAGGCTGCATCAGGACAAAACATTGGCACAAATAAAGGGATTGGAGGATAAAGTAACAGAGCTGGAATCAGTCCTCAAGTCTTTGCAAGGCGAGAAAAGAGATATGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGTAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTGGAATCATTGTCAAAAGAGAAAGAAGCTGAACTTTCTGCTCTCACGGAGAAATTTGAGGAGACCAATAATGAACATGGACAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCCACTCTGTCTGAGAGGCACAGGCTGCATCAGGACGAAACATTGGCACAAATAAAGGGATTGGAGGATAAAGTAACAGAGCTGGAATCAGTCCTCGAGTCTTTGCAAGGCGAGAAAAGAGATATGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGTAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTGGAATCATTGTCAAAAGAGAAAGAAGCTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATGGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAGGCACAGGCTGCATCAGGACGAAACATTGGCGCAAATAAAGGGATTGGAGGATAAAGTAACTGAGCTGGAAGTGGCCCTCAAGTCTTTGCAAGGCGAGAAAAGAGATACGGAAGTGAAGTTTGATAGCAAAGAGAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTTAGAACTCGAATCAATGTCAAAAGAGAGAGACGCTGAACTTTCTGCTCTGACAAAGAAACTTCAGGATAGCAGTGATGAATCATCGTCTACTATAGCAGATTTGACATCACAGGTCAACAATCTGCTAGCAGACTTAAGTTCTGTCCGCCGTGAGAAAGTTGAATTGGAGGAAAATATGCGACGTCAAAGTGATGAAGCATCCACTCAAGTCAAGGGCTTAATGGAACAGTTGAGTATATTGGAGTCCCTAAACAGCCAGAAAGCTGAGTTGCAAGTGAATCTTGAGAATAAAACTCAAGAAATTTCTGAGTACTTGATACAGGTACAAAGTCTTAATGAAGAGATAGCAAAAAGGACGACTGATCATCAGATGATTCTGGAAGAGAAAGAGATTTTGATAGCAGAAATGAAAGATCTTGAGCTAAAACTGGAAGCCATGCAGAACCAGAAGAATGAACTCGAAGAGGATATAAGAAAGAAAATTCTAGAGCATGACCAGTTGAGAGCAGAAATGTTGGACCTAAAGGATCAATTTTCTGTGTTTGAGAAGACAATAGCACAAAGAGAGGTAGATTTCTCTTCTCTCCAAGAGAAACATGATAATGGACAGAACGAAGCCGCTGCTCAAGTAGTGGCCCTCGTGGCACAGGTTAATGGTCTACAAGAAGAGTTGGATTCATTGCAAACCCAGAAGAACCAAATGGAGTTGCAGTTTGAGAAGGAAAAACAGGAGCTTCTAGATACCCTGACGCAGTTGGGAACTGATAAGATCGAGTTAACGAGCAAGACCAGTGATCTTCAGAGAATGCTGAATGAACAGGAGGATTTATACACCAAGTTAATTGAGGAACATAAACAGCTTGAAGGTAAGTGTCAGGATGACAAGGTTAGCATTGAATCCAAAGATCAAATGATAGCTGATTTGGAACAGTTGTCTGAAGACCTCAAAAGAGACCTTGAAGAAAAAGGTGATGAACTAAGTTCTTTGGTAGAGAAATCCCGCAATACTGAAGTTAAGCTCCGCCTGTCAAACCAGAAGCTCCGGGTTACAGAGCAAGTGCTGGCCGAGAAGGAACAGAACTTCATAATTGCTGAGCTGAAATACCAAGAAGAACAAAGAGTGCTCGAAGACAGGATTGCTGCATTGACTGGTATAATCTCTGCAAACAATGAAGCTTATCAGAGAAACATCAACTGCATTTCAGACAATGTGAACAGTTCTTTGATCGCACTGGAATCTGTGATTAACAAATTTGTCGATGACTATGCGAAGTACGAGAAGTGTATTGTTGAAACATCAGAGCAGCTTCAGAATGCAAAGAAATGGGTTGCGGAAACGAATGTTGAGAGAGAGAAGTTGAACAGGAAGGTGGGGGTCCTAAGCAAAGAACTGCAAGATAAGATAGAGGAAGCATTGGTGTTTAGAGAGAAGGTTGAGAAGTTGGAAACAGAAGCAAGCAAGGTACAAGTGGAGAAGGGGGATCTGATCAAAGCAGTGAATCAGTTTGAGAAGAAGGTAGAGGAGTTGAAGCAGATTGTGAAAGAGAAGAATGAGGGCATATCGGTTCTGGGAGAGGAGAAGCGAGAAGCCATAAGGCAGCTGTGCATATGCATTGAGTATCACCAGAGTCGCTATGATGATCTCAAGGAGGTGCTTTCGAAGATGGCTCCTAGAGGCCAGAGGAGGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031090 GO:0032386 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0042221 GO:0042306 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046822 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051223 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0090087 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1900180 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903827 GO:1904589 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

1459

Amino Acids

168.06

Weight (kDa)

4.81

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIP1	PF07765	1 - 52	1.2e-10	KIP1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004928)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64330 AT5G41790 AT5G41790
fragaria_vesca	FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072
malus_domestica	MD06G1102300.v1.1 MD14G1121500.v1.1
prunus_persica	Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1
pyrus_communis	pycom06g09710
rosa_chinensis	RchiOBHm_Chr7g0195431
rosa_laevigata	RLG00000004121
rosa_multiflora	Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00260490
rosa_rugosa	Rorug07G0023200
rosa_samantha	Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700
rosa_wichuraiana	Rw7G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	162, 2869
Acc36I	ACCTGC	6 cut(s)	1064, 1382, 1700, 2018, 2336, 2654
AccI	GTMKAC	3 cut(s)	631, 2771, 3343
AciI	CCGC	6 cut(s)	13, 2830, 3303, 3685, 3706, 4016
AclWI	GGATC	2 cut(s)	3219, 4173
AcoI	YGGCCR	1 cut(s)	3747
AcuI	CTGAAG	9 cut(s)	128, 437, 819, 1001, 2729, 3467, 3642, 3714, 3977
AcyI	GRCGYC	2 cut(s)	159, 2866
AfaI	GTAC	9 cut(s)	1185, 1503, 1821, 2139, 2457, 2996, 3009, 3959, 4149
AfiI	CCNNNNNNNGG	2 cut(s)	19, 4369
AflII	CTTAAG	2 cut(s)	962, 2818
AjuI	GAANNNNNNNTTGG	4 cut(s)	1007, 1039, 2831, 2863
Alw21I	GWGCWC	1 cut(s)	3810
AlwI	GGATC	2 cut(s)	3219, 4173
AlwNI	CAGNNNCTG	1 cut(s)	314
Ama87I	CYCGRG	3 cut(s)	1313, 1631, 2267
AoxI	GGCC	5 cut(s)	2580, 3318, 3747, 4360, 4371
ApeKI	GCWGC	9 cut(s)	1243, 1561, 1879, 2197, 2515, 3305, 3824, 3988, 4282
Asp700I	GAANNNNTTC	1 cut(s)	1308
AspLEI	GCGC	2 cut(s)	78, 2539
AspS9I	GGNCC	6 cut(s)	991, 2581, 3202, 3319, 4060, 4371
AsuC2I	CCSGG	2 cut(s)	20, 3728
AsuHPI	GGTGA	3 cut(s)	617, 3665, 4298
AsuII	TTCGAA	1 cut(s)	4343
AsuNHI	GCTAGC	1 cut(s)	2809
AvaI	CYCGRG	3 cut(s)	1313, 1631, 2267
AvaII	GGWCC	3 cut(s)	991, 3202, 4060
BaeI	ACNNNNGTAYC	2 cut(s)	2604, 2637
BauI	CACGAG	1 cut(s)	3323
BbsI	GAAGAC	4 cut(s)	530, 3239, 3630, 3819
Bbv12I	GWGCWC	1 cut(s)	3810
BbvI	GCAGC	9 cut(s)	1230, 1548, 1866, 2184, 2502, 3292, 3811, 4000, 4294
BccI	CCATC	2 cut(s)	1272, 4342
BceAI	ACGGC	3 cut(s)	89, 447, 2817
BcgI	CGANNNNNNTGC	4 cut(s)	3287, 3321, 3932, 3966
BclI	TGATCA	4 cut(s)	235, 745, 3046, 4170
BcnI	CCSGG	2 cut(s)	20, 3728
BfaI	CTAG	9 cut(s)	131, 401, 785, 954, 2810, 3170, 3422, 4356, 4375
BfmI	CTRYAG	3 cut(s)	435, 1165, 2775
BfrI	CTTAAG	2 cut(s)	962, 2818
BfuAI	ACCTGC	6 cut(s)	1064, 1382, 1700, 2018, 2336, 2654
BglI	GCCNNNNNGGC	1 cut(s)	3326
BglII	AGATCT	1 cut(s)	3097
BlpI	GCTNAGC	1 cut(s)	3777
BmcAI	AGTACT	1 cut(s)	2996
Bme1390I	CCNGG	2 cut(s)	20, 3728
Bme18I	GGWCC	3 cut(s)	991, 3202, 4060
BmeT110I	CYCGRG	3 cut(s)	1313, 1631, 2267
BmgT120I	GGNCC	6 cut(s)	991, 2581, 3202, 3319, 4060, 4371
BmiI	GGNNCC	3 cut(s)	174, 4061, 4353
BmrFI	CCNGG	2 cut(s)	20, 3728
BmsI	GCATC	8 cut(s)	535, 697, 1255, 1573, 1891, 2209, 2527, 2891
BmtI	GCTAGC	1 cut(s)	2813
BpiI	GAAGAC	4 cut(s)	530, 3239, 3630, 3819
Bpu10I	CCTNAGC	2 cut(s)	867, 4064
Bpu1102I	GCTNAGC	1 cut(s)	3777
Bpu14I	TTCGAA	1 cut(s)	4343
BpuMI	CCSGG	2 cut(s)	20, 3728
BsaBI	GATNNNNATC	2 cut(s)	126, 147
BsaHI	GRCGYC	2 cut(s)	159, 2866
BsaI	GGTCTC	7 cut(s)	1034, 1154, 1472, 1790, 2108, 2426, 3630
BsaXI	ACNNNNNCTCC	2 cut(s)	3380, 3410
Bsc4I	CCNNNNNNNGG	2 cut(s)	19, 4369
Bse3DI	GCAATG	1 cut(s)	3362
Bse8I	GATNNNNATC	2 cut(s)	126, 147
BseGI	GGATG	4 cut(s)	73, 1283, 2882, 3568
BseJI	GATNNNNATC	2 cut(s)	126, 147
BseLI	CCNNNNNNNGG	2 cut(s)	19, 4369
BseMI	GCAATG	1 cut(s)	3362
BseXI	GCAGC	9 cut(s)	1230, 1548, 1866, 2184, 2502, 3292, 3811, 4000, 4294
BshFI	GGCC	5 cut(s)	2582, 3320, 3749, 4362, 4373
BsiHKAI	GWGCWC	1 cut(s)	3810
BsiHKCI	CYCGRG	3 cut(s)	1313, 1631, 2267
BsiSI	CCGG	2 cut(s)	19, 3727
BslFI	GGGAC	4 cut(s)	97, 202, 815, 2914
BslI	CCNNNNNNNGG	2 cut(s)	19, 4369
BsmBI	CGTCTC	2 cut(s)	166, 2706
BsmFI	GGGAC	4 cut(s)	97, 202, 815, 2914
BsmI	GAATGC	9 cut(s)	108, 1075, 1393, 1711, 2029, 2347, 2665, 3495, 4003
BsnI	GGCC	5 cut(s)	2582, 3320, 3749, 4362, 4373
Bso31I	GGTCTC	7 cut(s)	1034, 1154, 1472, 1790, 2108, 2426, 3630
BsoBI	CYCGRG	3 cut(s)	1313, 1631, 2267
Bsp119I	TTCGAA	1 cut(s)	4343
Bsp1286I	GDGCHC	1 cut(s)	3810
Bsp1720I	GCTNAGC	1 cut(s)	3777
BspACI	CCGC	6 cut(s)	13, 2830, 3303, 3685, 3706, 4016
BspANI	GGCC	5 cut(s)	2582, 3320, 3749, 4362, 4373
BspLI	GGNNCC	3 cut(s)	174, 4061, 4353
BspMI	ACCTGC	6 cut(s)	1064, 1382, 1700, 2018, 2336, 2654
BspOI	GCTAGC	1 cut(s)	2813
BspPI	GGATC	2 cut(s)	3219, 4173
BspT104I	TTCGAA	1 cut(s)	4343
BspTI	CTTAAG	2 cut(s)	962, 2818
BspTNI	GGTCTC	7 cut(s)	1034, 1154, 1472, 1790, 2108, 2426, 3630
BsrDI	GCAATG	1 cut(s)	3362
BssNI	GRCGYC	2 cut(s)	159, 2866
BssSI	CACGAG	1 cut(s)	3323
Bst2BI	CACGAG	1 cut(s)	3323
Bst4CI	ACNGT	5 cut(s)	360, 439, 2913, 3615, 3902
Bst6I	CTCTTC	5 cut(s)	3018, 3060, 3141, 3268, 3345
BstACI	GRCGYC	2 cut(s)	159, 2866
BstAFI	CTTAAG	2 cut(s)	962, 2818
BstAPI	GCANNNNNTGC	5 cut(s)	1243, 1561, 1879, 2197, 2515
BstBI	TTCGAA	1 cut(s)	4343
BstC8I	GCNNGC	3 cut(s)	2811, 3747, 4141
BstF5I	GGATG	4 cut(s)	73, 1283, 2882, 3568
BstHHI	GCGC	2 cut(s)	78, 2539
BstMWI	GCNNNNNNNGC	6 cut(s)	1243, 1561, 1879, 2197, 2515, 3326
BstSCI	CCNGG	2 cut(s)	18, 3726
BstSFI	CTRYAG	3 cut(s)	435, 1165, 2775
BstV1I	GCAGC	9 cut(s)	1230, 1548, 1866, 2184, 2502, 3292, 3811, 4000, 4294
BstV2I	GAAGAC	4 cut(s)	530, 3239, 3630, 3819
BstX2I	RGATCY	2 cut(s)	3097, 4165
BstYI	RGATCY	2 cut(s)	3097, 4165
BsuRI	GGCC	5 cut(s)	2582, 3320, 3749, 4362, 4373
BtsCI	GGATG	4 cut(s)	73, 1283, 2882, 3568
BtsI	GCAGTG	2 cut(s)	2761, 4185
BtsIMutI	CAGTG	5 cut(s)	942, 2761, 3481, 3914, 4185
BveI	ACCTGC	6 cut(s)	1064, 1382, 1700, 2018, 2336, 2654
Cac8I	GCNNGC	3 cut(s)	2811, 3747, 4141
CaiI	CAGNNNCTG	1 cut(s)	314
CfoI	GCGC	2 cut(s)	78, 2539
Cfr13I	GGNCC	6 cut(s)	991, 2581, 3202, 3319, 4060, 4371
CseI	GACGC	4 cut(s)	65, 539, 2723, 3442
Csp6I	GTAC	9 cut(s)	1184, 1502, 1820, 2138, 2456, 2995, 3008, 3958, 4148
CviAII	CATG	7 cut(s)	1493, 1811, 2129, 2447, 3121, 3176, 3281
CviQI	GTAC	9 cut(s)	1184, 1502, 1820, 2138, 2456, 2995, 3008, 3958, 4148
EaeI	YGGCCR	1 cut(s)	3747
Eam1104I	CTCTTC	5 cut(s)	3018, 3060, 3141, 3268, 3345
EarI	CTCTTC	5 cut(s)	3018, 3060, 3141, 3268, 3345
EciI	GGCGGA	2 cut(s)	2819, 3695
Eco31I	GGTCTC	7 cut(s)	1034, 1154, 1472, 1790, 2108, 2426, 3630
Eco47I	GGWCC	3 cut(s)	991, 3202, 4060
Eco57I	CTGAAG	9 cut(s)	128, 437, 819, 1001, 2729, 3467, 3642, 3714, 3977
Eco88I	CYCGRG	3 cut(s)	1313, 1631, 2267
EcoO109I	RGGNCCY	2 cut(s)	4060, 4371
EcoRI	GAATTC	1 cut(s)	718
EcoT22I	ATGCAT	1 cut(s)	4298
Esp3I	CGTCTC	2 cut(s)	166, 2706
FaeI	CATG	7 cut(s)	1496, 1814, 2132, 2450, 3124, 3179, 3284
FaqI	GGGAC	4 cut(s)	97, 202, 815, 2914
FatI	CATG	7 cut(s)	1492, 1810, 2128, 2446, 3120, 3175, 3280
FauI	CCCGC	1 cut(s)	3692
FauNDI	CATATG	1 cut(s)	4292
FbaI	TGATCA	4 cut(s)	235, 745, 3046, 4170
FblI	GTMKAC	3 cut(s)	631, 2771, 3343
FokI	GGATG	4 cut(s)	80, 1290, 2869, 3575
FspBI	CTAG	9 cut(s)	131, 401, 785, 954, 2810, 3170, 3422, 4356, 4375
GlaI	GCGC	2 cut(s)	77, 2538
HaeIII	GGCC	5 cut(s)	2582, 3320, 3749, 4362, 4373
HapII	CCGG	2 cut(s)	19, 3727
HgaI	GACGC	4 cut(s)	65, 539, 2723, 3442
HhaI	GCGC	2 cut(s)	78, 2539
Hin1I	GRCGYC	2 cut(s)	159, 2866
Hin1II	CATG	7 cut(s)	1496, 1814, 2132, 2450, 3124, 3179, 3284
Hin6I	GCGC	2 cut(s)	76, 2537
HinP1I	GCGC	2 cut(s)	76, 2537
HincII	GTYRAC	3 cut(s)	632, 2800, 3462
HindII	GTYRAC	3 cut(s)	632, 2800, 3462
HindIII	AAGCTT	4 cut(s)	110, 460, 593, 3858
HpaI	GTTAAC	1 cut(s)	3462
HpaII	CCGG	2 cut(s)	19, 3727
HphI	GGTGA	3 cut(s)	617, 3665, 4298
Hpy99I	CGWCG	2 cut(s)	59, 2868
HpyCH4III	ACNGT	5 cut(s)	360, 439, 2913, 3615, 3902
HpyCH4IV	ACGT	2 cut(s)	159, 2866
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1243, 1561, 1879, 2197, 2515, 3326
HpySE526I	ACGT	2 cut(s)	159, 2866
Hsp92I	GRCGYC	2 cut(s)	159, 2866
Hsp92II	CATG	7 cut(s)	1496, 1814, 2132, 2450, 3124, 3179, 3284
HspAI	GCGC	2 cut(s)	76, 2537
Ksp22I	TGATCA	4 cut(s)	235, 745, 3046, 4170
KspAI	GTTAAC	1 cut(s)	3462
Lsp1109I	GCAGC	9 cut(s)	1230, 1548, 1866, 2184, 2502, 3292, 3811, 4000, 4294
LweI	GCATC	8 cut(s)	535, 697, 1255, 1573, 1891, 2209, 2527, 2891
MaeI	CTAG	9 cut(s)	131, 401, 785, 954, 2810, 3170, 3422, 4356, 4375
MaeII	ACGT	2 cut(s)	159, 2866
MaeIII	GTNAC	8 cut(s)	47, 766, 1291, 1609, 1927, 2245, 2563, 3730
MflI	RGATCY	2 cut(s)	3097, 4165
MhlI	GDGCHC	1 cut(s)	3810
MlyI	GAGTC	8 cut(s)	320, 637, 797, 1325, 1643, 2279, 2936, 4321
MmeI	TCCRAC	4 cut(s)	342, 3180, 3336, 4107
Mph1103I	ATGCAT	1 cut(s)	4298
MroXI	GAANNNNTTC	1 cut(s)	1308
MslI	CAYNNNNRTG	1 cut(s)	3285
MspA1I	CMGCKG	3 cut(s)	751, 3305, 4285
MspCI	CTTAAG	2 cut(s)	962, 2818
MspI	CCGG	2 cut(s)	19, 3727
MspR9I	CCNGG	2 cut(s)	20, 3728
Mva1269I	GAATGC	9 cut(s)	108, 1075, 1393, 1711, 2029, 2347, 2665, 3495, 4003
MwoI	GCNNNNNNNGC	6 cut(s)	1243, 1561, 1879, 2197, 2515, 3326
NciI	CCSGG	2 cut(s)	20, 3728
NdeI	CATATG	1 cut(s)	4292
NheI	GCTAGC	1 cut(s)	2809
NlaIII	CATG	7 cut(s)	1496, 1814, 2132, 2450, 3124, 3179, 3284
NlaIV	GGNNCC	3 cut(s)	174, 4061, 4353
NmeAIII	GCCGAG	1 cut(s)	3775
NmuCI	GTSAC	1 cut(s)	47
NsiI	ATGCAT	1 cut(s)	4298
NspV	TTCGAA	1 cut(s)	4343
PaeR7I	CTCGAG	3 cut(s)	1313, 1631, 2267
PctI	GAATGC	9 cut(s)	108, 1075, 1393, 1711, 2029, 2347, 2665, 3495, 4003
PdmI	GAANNNNTTC	1 cut(s)	1308
PfoI	TCCNGGA	1 cut(s)	18
PleI	GAGTC	8 cut(s)	319, 636, 796, 1324, 1642, 2278, 2935, 4320
PpsI	GAGTC	8 cut(s)	319, 636, 796, 1324, 1642, 2278, 2935, 4320
PpuMI	RGGWCCY	1 cut(s)	4060
Psp5II	RGGWCCY	1 cut(s)	4060
PspN4I	GGNNCC	3 cut(s)	174, 4061, 4353
PspPI	GGNCC	6 cut(s)	991, 2581, 3202, 3319, 4060, 4371
PspPPI	RGGWCCY	1 cut(s)	4060
PspXI	VCTCGAGB	2 cut(s)	1631, 2267
PstNI	CAGNNNCTG	1 cut(s)	314
PsuI	RGATCY	2 cut(s)	3097, 4165
PvuII	CAGCTG	2 cut(s)	751, 4285
RsaI	GTAC	9 cut(s)	1185, 1503, 1821, 2139, 2457, 2996, 3009, 3959, 4149
RsaNI	GTAC	9 cut(s)	1184, 1502, 1820, 2138, 2456, 2995, 3008, 3958, 4148
RseI	CAYNNNNRTG	1 cut(s)	3285
SalI	GTCGAC	1 cut(s)	630
Sau96I	GGNCC	6 cut(s)	991, 2581, 3202, 3319, 4060, 4371
ScaI	AGTACT	1 cut(s)	2996
SchI	GAGTC	8 cut(s)	320, 637, 797, 1325, 1643, 2279, 2936, 4321
ScrFI	CCNGG	2 cut(s)	20, 3728
SduI	GDGCHC	1 cut(s)	3810
SfaNI	GCATC	8 cut(s)	535, 697, 1255, 1573, 1891, 2209, 2527, 2891
SfcI	CTRYAG	3 cut(s)	435, 1165, 2775
Sfr274I	CTCGAG	3 cut(s)	1313, 1631, 2267
SfuI	TTCGAA	1 cut(s)	4343
SinI	GGWCC	3 cut(s)	991, 3202, 4060
SlaI	CTCGAG	3 cut(s)	1313, 1631, 2267
SmiMI	CAYNNNNRTG	1 cut(s)	3285
SsiI	CCGC	6 cut(s)	13, 2830, 3303, 3685, 3706, 4016
SspI	AATATT	2 cut(s)	326, 664
SspMI	CTAG	9 cut(s)	131, 401, 785, 954, 2810, 3170, 3422, 4356, 4375
StyD4I	CCNGG	2 cut(s)	18, 3726
TaaI	ACNGT	5 cut(s)	360, 439, 2913, 3615, 3902
TaiI	ACGT	2 cut(s)	162, 2869
TatI	WGTACW	1 cut(s)	2994
TauI	GCSGC	1 cut(s)	3305
TscAI	CASTG	5 cut(s)	949, 2761, 3481, 3921, 4185
TseFI	GTSAC	1 cut(s)	47
TseI	GCWGC	9 cut(s)	1243, 1561, 1879, 2197, 2515, 3305, 3824, 3988, 4282
Tsp45I	GTSAC	1 cut(s)	47
TspGWI	ACGGA	3 cut(s)	1796, 2114, 2630
TspRI	CASTG	5 cut(s)	949, 2761, 3481, 3921, 4185
Vha464I	CTTAAG	2 cut(s)	962, 2818
VpaK11BI	GGWCC	3 cut(s)	991, 3202, 4060
XbaI	TCTAGA	4 cut(s)	130, 400, 3169, 3421
XhoI	CTCGAG	3 cut(s)	1313, 1631, 2267
XmiI	GTMKAC	3 cut(s)	631, 2771, 3343
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	9 cut(s)	131, 401, 785, 954, 2810, 3170, 3422, 4356, 4375
ZraI	GACGTC	2 cut(s)	160, 2867
ZrmI	AGTACT	1 cut(s)	2996
Zsp2I	ATGCAT	1 cut(s)	4298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.