Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004928

Physical Location & Seq

Genomic Coordinates Reverse (-)

11247200 .. 11254161

Gene Structure 6962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG152100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4647 bp

ATGGATGACAAAGTGAATAGAATATTGAAGCTTCTAAAAGATGAAGATCTTGAAGAAAAAGATTCCAACCCGGTGGAGAACTCCAAAAAGGAACCTCTTGCAGAGCTAATTCAGGATTTCCACAAACAATACCAATCCCTCTATGCAGAATATGATCATCTAACAGGAGTGCTAAAGAAAAAAATGCGTGGCAAGCAAGATAAGGATAGCAGTTCTTCATCGAGCTCAGAGTCTGATTCAGAATATTCTTCAAATGACAAGAAAAGTAAGAATGGACTACTGGAAAGTGACTATCAGAATATAGCTGATGTTAAGCAAGAACTCGAATCAGCACATCTAGAAGTTGCTGACCTGAAGAGGAAACTGACGGCTACAATTGAAGAAAAAGAGGCGTTAAACTTGGAATATGCGACGGCTTTGAGCAAGATAGAAGAAACAGAGAAGATTTCCAAAGATTTGAAGACTGAAGCTGAAAGATTAGATGTTGAAAAACTGAAACTTTTGGCTGAGAATAGTGAACTAGATCAAAAACTTGAGACTGGTGGAAAGAAAGAAGCTGAACTGAGTCGAAAAGTGGAAGATTTGGAAAGAGAGAGAGATAATCTGATTAAGGAGAAAGAGACTAGTCTGAGAAGGATTGAAGATGGAGAAAATATTTCAGCAGACTTGAGAAGTTTGGTTGATCACATGAAAGATGAAAAAGTAATCCTCGAGCAACAAGTAGAATCTCTTAGAGGGGACATCTCAAATATGAAGCATGAGCTGGAATCTTCAGAGCAGCAAGTGTCAGATTTAAGCAAAGCTAAGGAGGAAGAAACCTTGAAAGTTTTGGAGTTCTCAAGTGAGATTCAGCAGGCACAGAATGTGATACAAGAACTCACAGATGAAGCTAGTCAGCGTAAGGAAAAACTCAATCAGAAGGAGCAGGACCTTGAATCTTTGCAAGGTCAGAAAAGAGATTTGGAAGTGAAGTTTGAGAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCTAAAGAGAGAGAAGTTGAACTTTCTGCTCTCACGAAGAAATTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAGGCACAAACTGCATGAGAACGAAACATTGGCGCAGATAAAGGGGTTGGAGGAAAAAGTGACAGAGCTGAAATCTGACCTCGAATTTTTGCAAGGCGAGAAAAGAGATGTGGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTTGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTTTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAATCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGTGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGGGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCATTGCAAGGCGAGAAAAGAGATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGCTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAGACCAATAATGAACATAGTCAGGTACGGGAGCAATCAGGTCAGAGGGAAATGGAGTATTCAACTCTGTTTGAGAAGCATACACTGCATGAGAACAAAACTTTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGTCAGAGCTGAAATCGGCCCTCGAGTCTTTGCAAGGCGAGAAAAGAAATATTGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCGGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTCACAAAGAAACTTGAGGAAACCAATAATGAACATAGTCAGGTACGGGAGCAATTAGGTCAGAGGGAAATGGAGTATTCAACTCTGTCTGAGAAGCATACGCTGCATGAGAACGAAACATTGGCGCAAATAAAGGGATTGGAGGAAAAAGTGACAGAGCTGAAATCTGACCTCGAATTTTTGCAAGGGGAGAAAAGAGATGTGGAAGTGAAGTTTGAAAGCAAAGAAAAGCAACTGGCAGAGGAGAATGCAGGTTTACAAGCTCAAATTTCAGAACTCGAATCAATGTCAAAAGAGAGAGAAGCTGAACTTTCTGCTCTGACAAAGAAACTTCAGGATAGCAATGATGAATCATCGTCTACTATAGCAGATTTGACAGCACAGATCAACAATCTGCTAGTAGACTTAAGTTCTGTGCGCCGTGAGAAAGTTGAATTGGAGGAAAATATGGCATCTAAAAGTGATGAAGCATCGACTCAGGTCAAGGGCTTAATGGAACAGGTAAATGTATTGCAGCAGCAATTGGAGTCCCTACACAGCCAGAAAGCTGAATTGCAAGTGCAGCTTGAGAATAAAACTCAAGAAATTTCAGAGTACTTGATCCAGGTACAAATTCTGAATGAAGAGATAGCAAACAAGACGACGGATCATCAGAAGATTCTGGAAGAGAAAGAGATTTTGATAGCAGAAATGAAAGATCTCAAGCTAAAAGTGGAATCCATGCAGAATCAGAAGAATGAACTTGAAGAGGATATCAGAACGAAAATCCTAGAGCATGATCAGTTGAGAGCAGAAATGTTGGAGCTAAAGGATCAATTTTCTGTATTTGAGAAGACAATAGCACAAAGAGAACTAGAATTCTCCTCTCTCCAAGAGAAACATGAAAGTGGACAGAACGAAGCCTCTGCTCAAGTAGTGGCCCTTGTGGCACAGGTTAACGGTCTACAAGAAGAGTTGGAGTCATTGCAAACCCAGAATAAGCAAATGGAGTTGCAGTTTGAGAGGGAAAAACAAGAACTTCTAGAGAGCTTGACACAGTTGCAAACTGATAAGATCGAGTTAACGAGCAAGATCACTGATCTTCAGAGAATGCTTAACGAACAGGAGGATTTATACACCAAGTTAAATGAGGAACATAAACAGCTTGAAGGTAAGTGTCAGGACTACGAGGTTAGCATTGAATCCAAAGATCAGATAATAGCTGATTTGGAACAAATGTCTGAAGACCTGAAAAGAGACCTTGAAGAAAAAGGTGATGAACTCGGTTCTTTGGTAGAGAAATCTCGCAATACTGAAGTTAAGCTCCGTCTGTCAAACCAGAAGCTCCGGGTTACAGAGCAAGTACTGGCCGAGAAGGAACACAACTTCAGAGTTGCTGAGCTGAAATTCCAAGAAGAACAAAGAGTGCTCGAAGACAGGATTGCTGCATTGTCTGGTATAATCTCTGCAAACAATGAAGCTTATCAGAGAAACATCAACTGTATTTCAGACAATGTGAACAGTTCTTTGACTGCACTGGAATCTGTGATTAAGAAATTTGTGGATGACTATGCGAAGTATGAGAAGTGTATTGCTGAAACGTCGGAGCAGCTTCAGACTGCTAAGAAATGGGTTGCGGAAACAAATGATGAGAGAGAGAAGTTGAAGAGGGAGGTGGGGGCCCTAAGCAAACAACTGCAAGATAAAAAAGCGGAAGCATTGGTGTTTAGAGAGAGGGTTGAGAAGTTGGAGACAGAGGCGAGCAAGGAACAAGTGGAGAAGGGGGGTCTGATCAAAGCTGTGAATCAGCTTGAAAAGAAGGTAGAGGAGTTGAAGCAGATTGTGGAAGAGAAGAACAAGGGCATATTGGGTCTGGGAGAGGAGAAGCGGGAAGCCATAAGGCAGCTGTGCATATGGATCGAGTATCATCAGAGTCGCTATGATCATCTCAAGGAGGTGCTTTTAAAGATGGCTCCAAGAGGCCAGAGGAGGAGGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031090 GO:0032386 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0042221 GO:0042306 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046822 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051223 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0090087 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1900180 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903827 GO:1904589 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

1548

Amino Acids

178.44

Weight (kDa)

4.86

Isoelectric Point (pI)

48.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIP1	PF07765	1 - 52	1.2e-10	KIP1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004928)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64330 AT5G41790 AT5G41790
fragaria_vesca	FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072
malus_domestica	MD06G1102300.v1.1 MD14G1121500.v1.1
prunus_persica	Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1
pyrus_communis	pycom06g09710
rosa_chinensis	RchiOBHm_Chr7g0195431
rosa_laevigata	RLG00000004121
rosa_multiflora	Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00260490
rosa_rugosa	Rorug07G0023200
rosa_samantha	Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700
rosa_wichuraiana	Rw7G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	4 cut(s)	1001, 1319, 2591, 2909
AccI	GTMKAC	3 cut(s)	3026, 3069, 3610
AciI	CCGC	4 cut(s)	2588, 4283, 4358, 4534
AclWI	GGATC	4 cut(s)	3262, 3321, 3486, 4571
AcoI	YGGCCR	1 cut(s)	4014
AcuI	CTGAAG	9 cut(s)	374, 486, 756, 2984, 3734, 3909, 3981, 4018, 4244
AfaI	GTAC	9 cut(s)	1122, 1440, 1758, 2076, 2394, 2712, 3263, 3276, 4011
AflII	CTTAAG	1 cut(s)	3073
AhlI	ACTAGT	1 cut(s)	623
AjnI	CCWGG	1 cut(s)	3270
Alw21I	GWGCWC	2 cut(s)	227, 4077
Alw26I	GTCTC	9 cut(s)	530, 614, 1091, 1409, 1727, 2045, 2363, 3897, 4391
AlwI	GGATC	4 cut(s)	3262, 3321, 3486, 4571
AlwNI	CAGNNNCTG	1 cut(s)	233
Ama87I	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
AoxI	GGCC	8 cut(s)	1563, 1881, 2199, 2517, 3585, 4014, 4326, 4627
ApaI	GGGCCC	1 cut(s)	4330
AspLEI	GCGC	6 cut(s)	1204, 1840, 2158, 2476, 2794, 3087
AspS9I	GGNCC	8 cut(s)	928, 1564, 1882, 2200, 2518, 3586, 4326, 4327
AsuC2I	CCSGG	2 cut(s)	71, 3995
AsuHPI	GGTGA	1 cut(s)	3932
AvaI	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
AvaII	GGWCC	1 cut(s)	928
BaeGI	GKGCMC	1 cut(s)	4330
BanII	GRGCYC	2 cut(s)	227, 4330
BbsI	GAAGAC	4 cut(s)	467, 3506, 3897, 4086
Bbv12I	GWGCWC	2 cut(s)	227, 4077
BccI	CCATC	2 cut(s)	638, 4609
BceAI	ACGGC	3 cut(s)	384, 429, 3072
BcgI	CGANNNNNNTGC	4 cut(s)	3554, 3588, 4546, 4580
BciT130I	CCWGG	1 cut(s)	3272
BclI	TGATCA	5 cut(s)	154, 682, 3445, 4437, 4588
BcnI	CCSGG	2 cut(s)	71, 3995
BcoDI	GTCTC	9 cut(s)	530, 614, 1091, 1409, 1727, 2045, 2363, 3897, 4391
BcuI	ACTAGT	1 cut(s)	623
BfaI	CTAG	9 cut(s)	338, 521, 624, 891, 3065, 3437, 3521, 3689, 4645
BfmI	CTRYAG	1 cut(s)	3030
BfrI	CTTAAG	1 cut(s)	3073
BfuAI	ACCTGC	4 cut(s)	1001, 1319, 2591, 2909
BglI	GCCNNNNNGGC	1 cut(s)	3593
BglII	AGATCT	2 cut(s)	46, 3364
BlpI	GCTNAGC	1 cut(s)	4044
BmcAI	AGTACT	2 cut(s)	3263, 4011
Bme1390I	CCNGG	3 cut(s)	71, 3272, 3995
Bme18I	GGWCC	1 cut(s)	928
BmeT110I	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
BmgT120I	GGNCC	8 cut(s)	928, 1564, 1882, 2200, 2518, 3586, 4326, 4327
BmiI	GGNNCC	4 cut(s)	93, 4327, 4328, 4620
BmrFI	CCNGG	3 cut(s)	71, 3272, 3995
BmsI	GCATC	2 cut(s)	3128, 3146
BoxI	GACNNNNGTC	1 cut(s)	3146
BpiI	GAAGAC	4 cut(s)	467, 3506, 3897, 4086
Bpu10I	CCTNAGC	2 cut(s)	804, 4331
Bpu1102I	GCTNAGC	1 cut(s)	4044
BpuMI	CCSGG	2 cut(s)	71, 3995
BsaBI	GATNNNNATC	1 cut(s)	45
BsaI	GGTCTC	6 cut(s)	1091, 1409, 1727, 2045, 2363, 3897
BsaXI	ACNNNNNCTCC	2 cut(s)	3647, 3677
Bse3DI	GCAATG	5 cut(s)	1574, 1892, 2210, 3016, 3629
Bse8I	GATNNNNATC	1 cut(s)	45
BseBI	CCWGG	1 cut(s)	3272
BseGI	GGATG	2 cut(s)	10, 4216
BseJI	GATNNNNATC	1 cut(s)	45
BseMI	GCAATG	5 cut(s)	1574, 1892, 2210, 3016, 3629
BseSI	GKGCMC	1 cut(s)	4330
BsgI	GTGCAG	2 cut(s)	3248, 4164
BshFI	GGCC	8 cut(s)	1565, 1883, 2201, 2519, 3587, 4016, 4328, 4629
BsiHKAI	GWGCWC	2 cut(s)	227, 4077
BsiHKCI	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
BsiSI	CCGG	2 cut(s)	71, 3994
BslFI	GGGAC	2 cut(s)	752, 3181
BsmAI	GTCTC	9 cut(s)	530, 614, 1091, 1409, 1727, 2045, 2363, 3897, 4391
BsmFI	GGGAC	2 cut(s)	752, 3181
BsmI	GAATGC	8 cut(s)	1012, 1330, 1648, 1966, 2284, 2602, 2920, 3762
BsnI	GGCC	8 cut(s)	1565, 1883, 2201, 2519, 3587, 4016, 4328, 4629
Bso31I	GGTCTC	6 cut(s)	1091, 1409, 1727, 2045, 2363, 3897
BsoBI	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
Bsp120I	GGGCCC	1 cut(s)	4326
Bsp1286I	GDGCHC	3 cut(s)	227, 4077, 4330
Bsp1720I	GCTNAGC	1 cut(s)	4044
BspACI	CCGC	4 cut(s)	2588, 4283, 4358, 4534
BspANI	GGCC	8 cut(s)	1565, 1883, 2201, 2519, 3587, 4016, 4328, 4629
BspLI	GGNNCC	4 cut(s)	93, 4327, 4328, 4620
BspMI	ACCTGC	4 cut(s)	1001, 1319, 2591, 2909
BspPI	GGATC	4 cut(s)	3262, 3321, 3486, 4571
BspTI	CTTAAG	1 cut(s)	3073
BspTNI	GGTCTC	6 cut(s)	1091, 1409, 1727, 2045, 2363, 3897
BsrDI	GCAATG	5 cut(s)	1574, 1892, 2210, 3016, 3629
Bst2UI	CCWGG	1 cut(s)	3272
Bst4CI	ACNGT	4 cut(s)	3608, 3705, 4148, 4169
Bst6I	CTCTTC	7 cut(s)	350, 3285, 3327, 3408, 3612, 4307, 4488
BstAFI	CTTAAG	1 cut(s)	3073
BstAPI	GCANNNNNTGC	6 cut(s)	1180, 1498, 1816, 2134, 2452, 2770
BstC8I	GCNNGC	6 cut(s)	194, 855, 1648, 1966, 2284, 4408
BstF5I	GGATG	2 cut(s)	10, 4216
BstHHI	GCGC	6 cut(s)	1204, 1840, 2158, 2476, 2794, 3087
BstMAI	GTCTC	9 cut(s)	530, 614, 1091, 1409, 1727, 2045, 2363, 3897, 4391
BstMWI	GCNNNNNNNGC	9 cut(s)	193, 1180, 1498, 1816, 2134, 2452, 2770, 3229, 3593
BstNI	CCWGG	1 cut(s)	3272
BstPAI	GACNNNNGTC	1 cut(s)	3146
BstSCI	CCNGG	3 cut(s)	69, 3270, 3993
BstSFI	CTRYAG	1 cut(s)	3030
BstSLI	GKGCMC	1 cut(s)	4330
BstV2I	GAAGAC	4 cut(s)	467, 3506, 3897, 4086
BstX2I	RGATCY	2 cut(s)	46, 3364
BstXI	CCANNNNNNTGG	1 cut(s)	73
BstYI	RGATCY	2 cut(s)	46, 3364
BsuRI	GGCC	8 cut(s)	1565, 1883, 2201, 2519, 3587, 4016, 4328, 4629
BtsCI	GGATG	2 cut(s)	10, 4216
BtsI	GCAGTG	1 cut(s)	2450
BtsIMutI	CAGTG	3 cut(s)	2450, 3741, 4181
BveI	ACCTGC	4 cut(s)	1001, 1319, 2591, 2909
Cac8I	GCNNGC	6 cut(s)	194, 855, 1648, 1966, 2284, 4408
CaiI	CAGNNNCTG	1 cut(s)	233
CfoI	GCGC	6 cut(s)	1204, 1840, 2158, 2476, 2794, 3087
Cfr13I	GGNCC	8 cut(s)	928, 1564, 1882, 2200, 2518, 3586, 4326, 4327
Csp6I	GTAC	9 cut(s)	1121, 1439, 1757, 2075, 2393, 2711, 3262, 3275, 4010
CviQI	GTAC	9 cut(s)	1121, 1439, 1757, 2075, 2393, 2711, 3262, 3275, 4010
DraI	TTTAAA	1 cut(s)	4611
EaeI	YGGCCR	1 cut(s)	4014
Eam1104I	CTCTTC	7 cut(s)	350, 3285, 3327, 3408, 3612, 4307, 4488
EarI	CTCTTC	7 cut(s)	350, 3285, 3327, 3408, 3612, 4307, 4488
EciI	GGCGGA	1 cut(s)	2603
Ecl136II	GAGCTC	1 cut(s)	225
Eco24I	GRGCYC	2 cut(s)	227, 4330
Eco31I	GGTCTC	6 cut(s)	1091, 1409, 1727, 2045, 2363, 3897
Eco32I	GATATC	1 cut(s)	3421
Eco47I	GGWCC	1 cut(s)	928
Eco53kI	GAGCTC	1 cut(s)	225
Eco57I	CTGAAG	9 cut(s)	374, 486, 756, 2984, 3734, 3909, 3981, 4018, 4244
Eco88I	CYCGRG	5 cut(s)	710, 1568, 1886, 2204, 2522
EcoICRI	GAGCTC	1 cut(s)	225
EcoO109I	RGGNCCY	3 cut(s)	928, 4326, 4327
EcoRI	GAATTC	1 cut(s)	3524
EcoRII	CCWGG	1 cut(s)	3270
EcoRV	GATATC	1 cut(s)	3421
EcoT38I	GRGCYC	2 cut(s)	227, 4330
FaqI	GGGAC	2 cut(s)	752, 3181
FauI	CCCGC	1 cut(s)	4527
FauNDI	CATATG	1 cut(s)	4559
FbaI	TGATCA	5 cut(s)	154, 682, 3445, 4437, 4588
FblI	GTMKAC	3 cut(s)	3026, 3069, 3610
FokI	GGATG	2 cut(s)	17, 4223
FriOI	GRGCYC	2 cut(s)	227, 4330
FspBI	CTAG	9 cut(s)	338, 521, 624, 891, 3065, 3437, 3521, 3689, 4645
GlaI	GCGC	6 cut(s)	1203, 1839, 2157, 2475, 2793, 3086
HaeIII	GGCC	8 cut(s)	1565, 1883, 2201, 2519, 3587, 4016, 4328, 4629
HapII	CCGG	2 cut(s)	71, 3994
HhaI	GCGC	6 cut(s)	1204, 1840, 2158, 2476, 2794, 3087
Hin6I	GCGC	6 cut(s)	1202, 1838, 2156, 2474, 2792, 3085
HinP1I	GCGC	6 cut(s)	1202, 1838, 2156, 2474, 2792, 3085
HincII	GTYRAC	2 cut(s)	3604, 3729
HindII	GTYRAC	2 cut(s)	3604, 3729
HindIII	AAGCTT	2 cut(s)	29, 4125
HpaI	GTTAAC	2 cut(s)	3604, 3729
HpaII	CCGG	2 cut(s)	71, 3994
HphI	GGTGA	1 cut(s)	3932
Hpy188III	TCNNGA	9 cut(s)	50, 113, 338, 1081, 3002, 3248, 3329, 3689, 3827
Hpy99I	CGWCG	3 cut(s)	415, 3313, 4252
HpyAV	CCTTC	6 cut(s)	627, 913, 3809, 4015, 4420, 4459
HpyCH4III	ACNGT	4 cut(s)	3608, 3705, 4148, 4169
HpyCH4IV	ACGT	1 cut(s)	4247
HpyF10VI	GCNNNNNNNGC	9 cut(s)	193, 1180, 1498, 1816, 2134, 2452, 2770, 3229, 3593
HpySE526I	ACGT	1 cut(s)	4247
HspAI	GCGC	6 cut(s)	1202, 1838, 2156, 2474, 2792, 3085
Ksp22I	TGATCA	5 cut(s)	154, 682, 3445, 4437, 4588
KspAI	GTTAAC	2 cut(s)	3604, 3729
LweI	GCATC	2 cut(s)	3128, 3146
MaeI	CTAG	9 cut(s)	338, 521, 624, 891, 3065, 3437, 3521, 3689, 4645
MaeII	ACGT	1 cut(s)	4247
MaeIII	GTNAC	4 cut(s)	287, 1228, 2818, 3997
MfeI	CAATTG	2 cut(s)	375, 3188
MflI	RGATCY	2 cut(s)	46, 3364
MhlI	GDGCHC	3 cut(s)	227, 4077, 4330
MmeI	TCCRAC	6 cut(s)	90, 1197, 3447, 3603, 4230, 4374
MslI	CAYNNNNRTG	1 cut(s)	3552
MspA1I	CMGCKG	1 cut(s)	4552
MspCI	CTTAAG	1 cut(s)	3073
MspI	CCGG	2 cut(s)	71, 3994
MspR9I	CCNGG	3 cut(s)	71, 3272, 3995
MunI	CAATTG	2 cut(s)	375, 3188
Mva1269I	GAATGC	8 cut(s)	1012, 1330, 1648, 1966, 2284, 2602, 2920, 3762
MvaI	CCWGG	1 cut(s)	3272
MwoI	GCNNNNNNNGC	9 cut(s)	193, 1180, 1498, 1816, 2134, 2452, 2770, 3229, 3593
NciI	CCSGG	2 cut(s)	71, 3995
NdeI	CATATG	1 cut(s)	4559
NlaIV	GGNNCC	4 cut(s)	93, 4327, 4328, 4620
NmeAIII	GCCGAG	1 cut(s)	4042
NmuCI	GTSAC	3 cut(s)	287, 1228, 2818
PaeR7I	CTCGAG	5 cut(s)	710, 1568, 1886, 2204, 2522
PctI	GAATGC	8 cut(s)	1012, 1330, 1648, 1966, 2284, 2602, 2920, 3762
PpuMI	RGGWCCY	1 cut(s)	928
PshAI	GACNNNNGTC	1 cut(s)	3146
Psp124BI	GAGCTC	1 cut(s)	227
Psp5II	RGGWCCY	1 cut(s)	928
Psp6I	CCWGG	1 cut(s)	3270
PspGI	CCWGG	1 cut(s)	3270
PspN4I	GGNNCC	4 cut(s)	93, 4327, 4328, 4620
PspOMI	GGGCCC	1 cut(s)	4326
PspPI	GGNCC	8 cut(s)	928, 1564, 1882, 2200, 2518, 3586, 4326, 4327
PspPPI	RGGWCCY	1 cut(s)	928
PspXI	VCTCGAGB	5 cut(s)	710, 1568, 1886, 2204, 2522
PstNI	CAGNNNCTG	1 cut(s)	233
PsuI	RGATCY	2 cut(s)	46, 3364
PvuII	CAGCTG	1 cut(s)	4552
RsaI	GTAC	9 cut(s)	1122, 1440, 1758, 2076, 2394, 2712, 3263, 3276, 4011
RsaNI	GTAC	9 cut(s)	1121, 1439, 1757, 2075, 2393, 2711, 3262, 3275, 4010
RseI	CAYNNNNRTG	1 cut(s)	3552
SacI	GAGCTC	1 cut(s)	227
Sau96I	GGNCC	8 cut(s)	928, 1564, 1882, 2200, 2518, 3586, 4326, 4327
ScaI	AGTACT	2 cut(s)	3263, 4011
ScrFI	CCNGG	3 cut(s)	71, 3272, 3995
SduI	GDGCHC	3 cut(s)	227, 4077, 4330
SfaNI	GCATC	2 cut(s)	3128, 3146
SfcI	CTRYAG	1 cut(s)	3030
Sfr274I	CTCGAG	5 cut(s)	710, 1568, 1886, 2204, 2522
SinI	GGWCC	1 cut(s)	928
SlaI	CTCGAG	5 cut(s)	710, 1568, 1886, 2204, 2522
SmiMI	CAYNNNNRTG	1 cut(s)	3552
SpeI	ACTAGT	1 cut(s)	623
SsiI	CCGC	4 cut(s)	2588, 4283, 4358, 4534
SspI	AATATT	4 cut(s)	24, 245, 655, 2551
SspMI	CTAG	9 cut(s)	338, 521, 624, 891, 3065, 3437, 3521, 3689, 4645
SstI	GAGCTC	1 cut(s)	227
StyD4I	CCNGG	3 cut(s)	69, 3270, 3993
TaaI	ACNGT	4 cut(s)	3608, 3705, 4148, 4169
TaiI	ACGT	1 cut(s)	4250
TatI	WGTACW	2 cut(s)	3261, 4009
TscAI	CASTG	3 cut(s)	2457, 3748, 4188
TseFI	GTSAC	3 cut(s)	287, 1228, 2818
Tsp45I	GTSAC	3 cut(s)	287, 1228, 2818
TspGWI	ACGGA	2 cut(s)	3326, 3962
TspRI	CASTG	3 cut(s)	2457, 3748, 4188
Vha464I	CTTAAG	1 cut(s)	3073
VpaK11BI	GGWCC	1 cut(s)	928
XbaI	TCTAGA	2 cut(s)	337, 3688
XhoI	CTCGAG	5 cut(s)	710, 1568, 1886, 2204, 2522
XmiI	GTMKAC	3 cut(s)	3026, 3069, 3610
XspI	CTAG	9 cut(s)	338, 521, 624, 891, 3065, 3437, 3521, 3689, 4645
ZrmI	AGTACT	2 cut(s)	3263, 4011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.