Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004782

Physical Location & Seq

Genomic Coordinates Forward (+)

18052607 .. 18060169

Gene Structure 7563 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G44750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3306 bp

ATGAAGCGTAGCTTGGGTTCAAATTCTTCAAACAATAGTGGCAGTGGAAGTAACAAGAAGTCTAAGAAGAATAATAATCCGAGCAATCAGAAAACCCTAGGCGCGGCATGGGGCGCTGCTTCTTCTCGTTCTTCTTTCCGGTCTTCTCCTTTCTCCGATTTCGGAAGTTACATGGAAGTGAAAAATAGGAAACTTCAGAACCAATTTGAGACTGAGGCTTCTGCTGCTTCTCGTGGTGTTTCGGGTTCTGAGAAACTTATTTTCCAAGGGGTTTCAATCTTTGTGGATGGGTTCACTATTCCTTCTCATCAGGAGTTGAAAGGATACATGATGAAGTATGGTGGAAGATTTGAGAACTACTTTTCTAGGCGTTCTGTTACACATATCATTTGCAGCAACCTTCCAGATAGTAAAGTCAAGAATCTTAGGACATTCAGCAGAGGATTACCTGTTGTGAAACCTACATGGATAGTGGACTCTATCTCTGCCAACAGACTTCTGGGCTGGGTTCCTTACCAGCTAGATCAACTAAATGATACCCAGCCAAAGTTGTCTGCCTTTTTTGCACCCAGAAGCCATTTGACCCCTCAGATGGCTTCGCCGGTTACATCTTTTCAGCCTGATACTGGATACAGTGAAGCTGAAGAAGGAAGTTCAATTAGAGCAGATGATTCAGAGGAAGCAAGGGACCACATCGATGATGAAATTGATGGCGTTTATATCGAGAACACTACTCCAGAACTGACAGAACAAACAGGAACTGGTGATCTGAAATCTTCTGAAATGAATGCAGAAGGACTTGGTAATTATGACATAGAAGAAAAAGAAGTTAGTAGTGAACTTCAATCCACTACTAATCTTCATTCCACTTCAGACAACAAGTCCGTTCATGCAAATGGGAAGAATGGTGGCAAATCAATTGCAACTGCTGCTGGATCTTCTACAAGGCGTCATTCAACTCTCGAGGACCCTAATTTTGTAGAAAACTACTTTAAGAATTCAAGGCTGCATTTTATTGGAACATGGAGGAACAGGTACCGTAAAAGATTTCATGGCTCTTCCAATGGACTTAAATGGGCAGATTCAGGCCAGAATACAGCTGAAATGGCCAAGAAGTCAACCATTATCCACATTGATTTGGATTGCTTCTTTGTGTCAGTGGTAATCAAGAACCGTCTTGAATTACACGACAAGCCGGTAGCTGTATGTCACTCAGATAACCCAAAAGGAACGGCTGAAATTTCATCTGCAAACTATCCAGCGCGGGCTTATGGAGTGAAGGCAGGTATGTTTGTAAGACATGCAAAAGACCTTTGCCCTCAGCTTGTTATTGTTCCTTACAACTTTGAAGCCTACGAAGAGGTAGCTGATCAGTTTTATGACATCTTGCATAGGCATTGCAGAAAAGTCCAGGCGCTAAGCTGCGATGAAGCGTTTTTAGATGTCTCAGATTTGAGTGATGTAGAAACCGAAGTTTTAGCCTCGACAATAAGGAATGAGATCCTTGAGACTACTGGATGCAGTGCAAGTGCTGGAATAGGCGGTACTATGCTAATGGCTCGTCTTGCTACCAGAGTTGCTAAACCAGCCGGTCAACTTTATATTTCTGCTGAGAAGGTAGAGGAGTTCTTGGATCAGCTTCCAGTCGGGACACTACCTGGTGTAGGTTCTGTGTTGAAGGAGAAGCTGGTGAAGCAAAATATTCAAACCTGTGGGCAGTTACGTTTGATTTCCAAGGATTCTCTTCAAAAGGATTTTGGGGTAAAAACCGGCGAGATGCTTTGGAGTTATAGCAGAGGACTAGACCTACGGTCAGTTACAGCAGTGCAGGAGAGTAAGTCCATAGGGGCTGAAGTGAATTGGGGTGTGCGGTTCAGAGATCAGCAAGACGTTCAACACTTCCTCCAATGCCTATGCAAAGAAGTTTCTTTGCGTCTGCAAGGATGTGAAATGATAGGACGCACTTTTACTCTTAAGATAAAAAAGAGAAAAAAAGATGCTGAAGAACCTACAAAGTATATGGGTTGTGGAGACTGTGACAATCTGAGTCGCTCCATCACGGTGCCTGCTGCTACAGATGACATAGAAGTTCTGCAGAGGATTTCAAAGAAGTTGTTTGGGTCATTTTGCTTGGATGTAAAGGAAGTTCGTGGGGTTGGGCTTCAGGTCTCTAAGCTTGACAGTGCAGATCCTTCTAATAAAGGTTCAAGGACTCTGAAATCATGGCTCAGCTCTGCACCTGCCGTTGTCCAAATAGAACAAGATGATAATGTTTTTGCTGCAAAGGTTAGGGAAAACTCAGATTGTAACAGGCCTGTTACTGGTGGAGTTTCTAGACTCCGAGAATCTAATTCAGAAGAATCTTCAATTCAGTCAGGTGATACAAATTCATCCTTACCGCCCATGTGTTATCTCGACATGGAAGTTCTAGAGAACCTTCCTCCAGAGCTCCTTTCAGAATTAGATGGAACCTACGGTGGGAAGCTGTTTGAGTTGATTGAGAAAAAACGAGGCAAAAGAAGAATCAACTGCAACTCTCCACATGTCTCCTTGGATGGCACTGCTGCTAGCATTAAAGAATTAAAATCTCTCTCAGTTAAGATACATGGCTTGAGCACCTCTGGAGAAAAGGAATATAAAGAACCATATGTGCCGCATCCTTCCATTGCCAGAACGTCTAATCAGCATACAATAGAAATGACGGATTTGTTGCCTTCATCCCTTAGTCAAGTCGACGTCTCTGTGTTACAAGAATTACCTGAAGAGTTGAGAGCTGACGTATTGGGAGCATTTCCTTCACACAGGAGACAACAGTCATCATCAGATGTTCCCAAGGAGACTTGTAAGAAACAAGATGAGGAACCAATAGATTTAAAGGGCACTGAGAATGAGATTGGATTATCATTTAGCTCTCTTTGGTTTGGGAATCCTCCTCTTTGGACAGAGAAGTTCAAAGTTAGTGGCAATTGTACTATGGAAAAACTTTCAGCGATATACTTCAAGGTTGCTCAGTCAAGGCCCATGTTATCCCTAGTCCTGCAACACGCTATTTCAGAAATGAGTAGTTTTCCTGATGCAGCAAGTGCCAGTGATTTGGACAAAGCTATTTACGATGTGTGTGAACTTCTTAAACAGTACATTAACCTCAAGGTAGGAGGTGATATTGAGGAGATATATCTCTGCTTCCGACTTCTGAAAAGATTAGCAGCAAGGAGCCAGCTTTTCCTACAAGTCTATGAGATATTGTCTCCCTTTATTCAGGCCTCGATCAGTGAACACTATGGAGGAAGCTTGAGTATACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000731 GO:0002200 GO:0002206 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002565 GO:0003674 GO:0003824 GO:0003887 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016043 GO:0016444 GO:0016445 GO:0016740 GO:0016772 GO:0016779 GO:0017125 GO:0018130 GO:0019438 GO:0019985 GO:0031974 GO:0031981 GO:0032042 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0035822 GO:0035861 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043504 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0070013 GO:0070987 GO:0071704 GO:0071840 GO:0071897 GO:0090304 GO:0090734 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

BRCT_2 IMS IMS_C IMS_HHH LIG3_BRCT

Protein Analysis

1101

Amino Acids

121.76

Weight (kDa)

6.28

Isoelectric Point (pI)

49.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRCT	PF00533	86 - 161	5.6e-10	BRCA1 C Terminus (BRCT) domain
BRCT_2	PF16589	87 - 168	7.3e-08	BRCT domain
LIG3_BRCT	PF16759	87 - 163	4.3e-06	DNA ligase 3 BRCT domain
IMS	PF00817	378 - 525	1.4e-43	impB/mucB/samB family
IMS_HHH_1	PF21999	551 - 602	9.6e-19	DNA polymerase-iota, thumb domain
IMS_C	PF11799	612 - 731	2.2e-19	impB/mucB/samB family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44750 AT5G44750
fragaria_vesca	FvH4_1g23540 FvH4_2g04972
malus_domestica	MD05G1091100.v1.1 MD10G1098400.v1.1
prunus_persica	Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1
pyrus_communis	pycom10g08430
rosa_chinensis	RchiOBHm_Chr6g0254741
rosa_laevigata	RLG00000014893
rosa_multiflora	Rmu_sc0007716.1_g000003
rosa_roxburghii	Rroxscaffold_7G00210560
rosa_rugosa	Rorug05G0554600
rosa_samantha	Rh6AG071600 Rh6BG063800 Rh6CG063200 Rh6DG060300
rosa_wichuraiana	Rw6G006270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2248
AatII	GACGTC	1 cut(s)	2739
Acc36I	ACCTGC	2 cut(s)	1274, 2248
Acc65I	GGTACC	1 cut(s)	1035
AccB1I	GGYRCC	2 cut(s)	1035, 2062
AccI	GTMKAC	2 cut(s)	2733, 3298
AccII	CGCG	2 cut(s)	104, 1264
AciI	CCGC	6 cut(s)	104, 1264, 1542, 1870, 2399, 2654
AclWI	GGATC	4 cut(s)	943, 1495, 1641, 2183
AcoI	YGGCCR	1 cut(s)	1107
AcsI	RAATTY	4 cut(s)	22, 997, 1239, 2386
AcuI	CTGAAG	7 cut(s)	179, 663, 855, 1872, 2022, 2147, 2781
AcyI	GRCGYC	2 cut(s)	949, 2736
AfaI	GTAC	4 cut(s)	1037, 1546, 2971, 3137
AfiI	CCNNNNNNNGG	6 cut(s)	103, 592, 626, 1664, 2321, 2478
AflII	CTTAAG	1 cut(s)	1973
AflIII	ACRYGT	1 cut(s)	2542
AhdI	GACNNNNNGTC	2 cut(s)	880, 1810
AjnI	CCWGG	2 cut(s)	1410, 1657
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
Alw21I	GWGCWC	2 cut(s)	2451, 2618
AlwI	GGATC	4 cut(s)	943, 1495, 1641, 2183
AlwNI	CAGNNNCTG	1 cut(s)	761
Ama87I	CYCGRG	1 cut(s)	962
AoxI	GGCC	5 cut(s)	1087, 1107, 2312, 3017, 3261
ApoI	RAATTY	4 cut(s)	22, 997, 1239, 2386
ArsI	GACNNNNNNTTYG	2 cut(s)	959, 991
Asp718I	GGTACC	1 cut(s)	1035
AspA2I	CCTAGG	1 cut(s)	97
AspLEI	GCGC	4 cut(s)	104, 116, 1264, 1417
AspS9I	GGNCC	3 cut(s)	688, 967, 3018
AsuHPI	GGTGA	4 cut(s)	776, 1702, 2390, 3170
AsuNHI	GCTAGC	1 cut(s)	2567
AvaI	CYCGRG	1 cut(s)	962
AvaII	GGWCC	2 cut(s)	688, 967
AvrII	CCTAGG	1 cut(s)	97
BaeGI	GKGCMC	1 cut(s)	2882
BalI	TGGCCA	1 cut(s)	1109
BanI	GGYRCC	2 cut(s)	1035, 2062
BanII	GRGCYC	1 cut(s)	2451
BauI	CACGAG	1 cut(s)	231
BbsI	GAAGAC	1 cut(s)	135
Bbv12I	GWGCWC	2 cut(s)	2451, 2618
BbvCI	CCTCAGC	1 cut(s)	1320
BccI	CCATC	6 cut(s)	281, 586, 704, 2063, 2459, 2549
BceAI	ACGGC	2 cut(s)	1248, 2228
BciT130I	CCWGG	2 cut(s)	1412, 1659
BciVI	GTATCC	2 cut(s)	317, 623
BclI	TGATCA	1 cut(s)	1369
BfaI	CTAG	8 cut(s)	98, 366, 521, 1802, 2334, 2429, 2568, 3032
BfmI	CTRYAG	2 cut(s)	2073, 2093
BfoI	RGCGCY	2 cut(s)	117, 1418
BfrI	CTTAAG	1 cut(s)	1973
BfuAI	ACCTGC	2 cut(s)	1274, 2248
BfuI	GTATCC	2 cut(s)	317, 623
BlnI	CCTAGG	1 cut(s)	97
BlpI	GCTNAGC	2 cut(s)	1418, 2228
Bme1390I	CCNGG	2 cut(s)	1412, 1659
Bme18I	GGWCC	2 cut(s)	688, 967
BmeRI	GACNNNNNGTC	2 cut(s)	880, 1810
BmeT110I	CYCGRG	1 cut(s)	962
BmgT120I	GGNCC	3 cut(s)	688, 967, 3018
BmiI	GGNNCC	8 cut(s)	510, 689, 969, 1037, 2064, 2470, 2862, 3215
BmrFI	CCNGG	2 cut(s)	1412, 1659
BmsI	GCATC	5 cut(s)	1508, 1767, 1987, 2665, 3064
BmtI	GCTAGC	1 cut(s)	2571
BoxI	GACNNNNGTC	1 cut(s)	2812
BpiI	GAAGAC	1 cut(s)	135
BpmI	CTGGAG	3 cut(s)	720, 2427, 2643
Bpu10I	CCTNAGC	1 cut(s)	1320
Bpu1102I	GCTNAGC	2 cut(s)	1418, 2228
BpuEI	CTTGAG	3 cut(s)	1526, 2632, 3131
Bsa29I	ATCGAT	1 cut(s)	696
BsaHI	GRCGYC	2 cut(s)	949, 2736
BsaI	GGTCTC	1 cut(s)	2173
BsaJI	CCNNGG	5 cut(s)	97, 265, 1734, 2550, 2832
BsaWI	WCCGGW	1 cut(s)	138
BsaXI	ACNNNNNCTCC	4 cut(s)	1823, 1853, 1887, 1917
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 592, 626, 1664, 2321, 2478
Bse118I	RCCGGY	4 cut(s)	601, 1195, 1589, 1769
Bse1I	ACTGG	6 cut(s)	631, 766, 1519, 1643, 2326, 3087
Bse3DI	GCAATG	2 cut(s)	1396, 2664
BseBI	CCWGG	2 cut(s)	1412, 1659
BseCI	ATCGAT	1 cut(s)	696
BseDI	CCNNGG	5 cut(s)	97, 265, 1734, 2550, 2832
BseGI	GGATG	8 cut(s)	292, 1523, 1949, 2140, 2390, 2560, 2656, 2717
BseLI	CCNNNNNNNGG	6 cut(s)	103, 592, 626, 1664, 2321, 2478
BseMI	GCAATG	2 cut(s)	1396, 2664
BseNI	ACTGG	6 cut(s)	631, 766, 1519, 1643, 2326, 3087
BseRI	GAGGAG	3 cut(s)	1637, 2922, 3182
BseSI	GKGCMC	1 cut(s)	2882
BseYI	CCCAGC	2 cut(s)	504, 540
BsgI	GTGCAG	3 cut(s)	1847, 2205, 2220
Bsh1236I	CGCG	2 cut(s)	104, 1264
BshFI	GGCC	5 cut(s)	1089, 1109, 2314, 3019, 3263
BshNI	GGYRCC	2 cut(s)	1035, 2062
BshVI	ATCGAT	1 cut(s)	696
BsiHKAI	GWGCWC	2 cut(s)	2451, 2618
BsiHKCI	CYCGRG	1 cut(s)	962
BsiSI	CCGG	5 cut(s)	139, 602, 1196, 1590, 1770
BslFI	GGGAC	2 cut(s)	701, 1663
BslI	CCNNNNNNNGG	6 cut(s)	103, 592, 626, 1664, 2321, 2478
BsmBI	CGTCTC	1 cut(s)	2743
BsmFI	GGGAC	2 cut(s)	701, 1663
BsmI	GAATGC	1 cut(s)	793
BsnI	GGCC	5 cut(s)	1089, 1109, 2314, 3019, 3263
Bso31I	GGTCTC	1 cut(s)	2173
BsoBI	CYCGRG	1 cut(s)	962
Bsp1286I	GDGCHC	3 cut(s)	2451, 2618, 2882
Bsp143I	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
Bsp1720I	GCTNAGC	2 cut(s)	1418, 2228
BspACI	CCGC	6 cut(s)	104, 1264, 1542, 1870, 2399, 2654
BspANI	GGCC	5 cut(s)	1089, 1109, 2314, 3019, 3263
BspDI	ATCGAT	1 cut(s)	696
BspFNI	CGCG	2 cut(s)	104, 1264
BspLI	GGNNCC	8 cut(s)	510, 689, 969, 1037, 2064, 2470, 2862, 3215
BspMAI	CTGCAG	1 cut(s)	2097
BspMI	ACCTGC	2 cut(s)	1274, 2248
BspOI	GCTAGC	1 cut(s)	2571
BspPI	GGATC	4 cut(s)	943, 1495, 1641, 2183
BspQI	GCTCTTC	1 cut(s)	1063
BspT107I	GGYRCC	2 cut(s)	1035, 2062
BspTI	CTTAAG	1 cut(s)	1973
BspTNI	GGTCTC	1 cut(s)	2173
BsrDI	GCAATG	2 cut(s)	1396, 2664
BsrFI	RCCGGY	4 cut(s)	601, 1195, 1589, 1769
BsrI	ACTGG	6 cut(s)	631, 766, 1519, 1643, 2326, 3087
BssAI	RCCGGY	4 cut(s)	601, 1195, 1589, 1769
BssECI	CCNNGG	5 cut(s)	97, 265, 1734, 2550, 2832
BssMI	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
BssNAI	GTATAC	1 cut(s)	3299
BssNI	GRCGYC	2 cut(s)	949, 2736
BssSI	CACGAG	1 cut(s)	231
BssT1I	CCWWGG	5 cut(s)	97, 265, 1734, 2550, 2832
Bst1107I	GTATAC	1 cut(s)	3299
Bst2BI	CACGAG	1 cut(s)	231
Bst2UI	CCWGG	2 cut(s)	1412, 1659
Bst6I	CTCTTC	4 cut(s)	1063, 1353, 1749, 2757
BstACI	GRCGYC	2 cut(s)	949, 2736
BstAFI	CTTAAG	1 cut(s)	1973
BstAPI	GCANNNNNTGC	2 cut(s)	929, 3083
BstC8I	GCNNGC	4 cut(s)	1266, 2067, 2569, 3218
BstENI	CCTNNNNNAGG	1 cut(s)	1662
BstF5I	GGATG	8 cut(s)	292, 1523, 1949, 2140, 2390, 2560, 2656, 2717
BstFNI	CGCG	2 cut(s)	104, 1264
BstH2I	RGCGCY	2 cut(s)	117, 1418
BstHHI	GCGC	4 cut(s)	104, 116, 1264, 1417
BstKTI	GATC	9 cut(s)	526, 769, 938, 1372, 1503, 1636, 1882, 2191, 3270
BstMBI	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
BstMWI	GCNNNNNNNGC	9 cut(s)	113, 224, 563, 929, 1106, 1565, 1586, 1693, 3083
BstNI	CCWGG	2 cut(s)	1412, 1659
BstNSI	RCATGY	2 cut(s)	1304, 2546
BstPAI	GACNNNNGTC	1 cut(s)	2812
BstSCI	CCNGG	2 cut(s)	1410, 1657
BstSFI	CTRYAG	2 cut(s)	2073, 2093
BstSLI	GKGCMC	1 cut(s)	2882
BstUI	CGCG	2 cut(s)	104, 1264
BstV2I	GAAGAC	1 cut(s)	135
BstX2I	RGATCY	3 cut(s)	935, 1500, 2188
BstXI	CCANNNNNNTGG	1 cut(s)	3094
BstYI	RGATCY	3 cut(s)	935, 1500, 2188
BstZ17I	GTATAC	1 cut(s)	3299
Bsu15I	ATCGAT	1 cut(s)	696
BsuI	GTATCC	2 cut(s)	317, 623
BsuRI	GGCC	5 cut(s)	1089, 1109, 2314, 3019, 3263
BsuTUI	ATCGAT	1 cut(s)	696
BtgZI	GCGATG	1 cut(s)	1440
BtsCI	GGATG	8 cut(s)	292, 1523, 1949, 2140, 2390, 2560, 2656, 2717
BtsI	GCAGTG	4 cut(s)	49, 1528, 1830, 2559
BveI	ACCTGC	2 cut(s)	1274, 2248
Cac8I	GCNNGC	4 cut(s)	1266, 2067, 2569, 3218
CaiI	CAGNNNCTG	1 cut(s)	761
CfoI	GCGC	4 cut(s)	104, 116, 1264, 1417
Cfr10I	RCCGGY	4 cut(s)	601, 1195, 1589, 1769
Cfr13I	GGNCC	3 cut(s)	688, 967, 3018
ClaI	ATCGAT	1 cut(s)	696
CseI	GACGC	3 cut(s)	938, 1922, 1968
CsiI	ACCWGGT	1 cut(s)	1657
Csp6I	GTAC	4 cut(s)	1036, 1545, 2970, 3136
CspCI	CAANNNNNGTGG	4 cut(s)	264, 299, 2941, 2976
CviQI	GTAC	4 cut(s)	1036, 1545, 2970, 3136
DpnI	GATC	9 cut(s)	525, 768, 937, 1371, 1502, 1635, 1881, 2190, 3269
DpnII	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
DraI	TTTAAA	1 cut(s)	2874
DriI	GACNNNNNGTC	2 cut(s)	880, 1810
EaeI	YGGCCR	1 cut(s)	1107
Eam1104I	CTCTTC	4 cut(s)	1063, 1353, 1749, 2757
Eam1105I	GACNNNNNGTC	2 cut(s)	880, 1810
EarI	CTCTTC	4 cut(s)	1063, 1353, 1749, 2757
Ecl136II	GAGCTC	1 cut(s)	2449
Eco130I	CCWWGG	5 cut(s)	97, 265, 1734, 2550, 2832
Eco147I	AGGCCT	2 cut(s)	2314, 3263
Eco24I	GRGCYC	1 cut(s)	2451
Eco31I	GGTCTC	1 cut(s)	2173
Eco47I	GGWCC	2 cut(s)	688, 967
Eco53kI	GAGCTC	1 cut(s)	2449
Eco57I	CTGAAG	7 cut(s)	179, 663, 855, 1872, 2022, 2147, 2781
Eco88I	CYCGRG	1 cut(s)	962
EcoICRI	GAGCTC	1 cut(s)	2449
EcoNI	CCTNNNNNAGG	1 cut(s)	1662
EcoO109I	RGGNCCY	1 cut(s)	967
EcoRI	GAATTC	1 cut(s)	997
EcoRII	CCWGG	2 cut(s)	1410, 1657
EcoT14I	CCWWGG	5 cut(s)	97, 265, 1734, 2550, 2832
EcoT38I	GRGCYC	1 cut(s)	2451
ErhI	CCWWGG	5 cut(s)	97, 265, 1734, 2550, 2832
Esp3I	CGTCTC	1 cut(s)	2743
FalI	AAGNNNNNCTT	1 cut(s)	28
FaqI	GGGAC	2 cut(s)	701, 1663
FauI	CCCGC	1 cut(s)	1257
FauNDI	CATATG	1 cut(s)	2647
FbaI	TGATCA	1 cut(s)	1369
FblI	GTMKAC	2 cut(s)	2733, 3298
FokI	GGATG	8 cut(s)	299, 1530, 1956, 2147, 2377, 2567, 2643, 2704
FriOI	GRGCYC	1 cut(s)	2451
FspBI	CTAG	8 cut(s)	98, 366, 521, 1802, 2334, 2429, 2568, 3032
GlaI	GCGC	4 cut(s)	103, 115, 1263, 1416
GsaI	CCCAGC	2 cut(s)	508, 544
GsuI	CTGGAG	3 cut(s)	720, 2427, 2643
HaeII	RGCGCY	2 cut(s)	117, 1418
HaeIII	GGCC	5 cut(s)	1089, 1109, 2314, 3019, 3263
HapII	CCGG	5 cut(s)	139, 602, 1196, 1590, 1770
HgaI	GACGC	3 cut(s)	938, 1922, 1968
HhaI	GCGC	4 cut(s)	104, 116, 1264, 1417
Hin1I	GRCGYC	2 cut(s)	949, 2736
Hin6I	GCGC	4 cut(s)	102, 114, 1262, 1415
HinP1I	GCGC	4 cut(s)	102, 114, 1262, 1415
HincII	GTYRAC	3 cut(s)	1119, 1595, 2734
HindII	GTYRAC	3 cut(s)	1119, 1595, 2734
HindIII	AAGCTT	2 cut(s)	2174, 3289
HpaII	CCGG	5 cut(s)	139, 602, 1196, 1590, 1770
HphI	GGTGA	4 cut(s)	776, 1702, 2390, 3170
Hpy166II	GTNNAC	9 cut(s)	294, 475, 839, 1119, 1595, 2734, 3122, 3275, 3299
Hpy8I	GTNNAC	9 cut(s)	294, 475, 839, 1119, 1595, 2734, 3122, 3275, 3299
Hpy99I	CGWCG	1 cut(s)	2738
HpyCH4IV	ACGT	5 cut(s)	1723, 1890, 2675, 2736, 2778
HpyF10VI	GCNNNNNNNGC	9 cut(s)	113, 224, 563, 929, 1106, 1565, 1586, 1693, 3083
HpySE526I	ACGT	5 cut(s)	1723, 1890, 2675, 2736, 2778
Hsp92I	GRCGYC	2 cut(s)	949, 2736
HspAI	GCGC	4 cut(s)	102, 114, 1262, 1415
KpnI	GGTACC	1 cut(s)	1039
Ksp22I	TGATCA	1 cut(s)	1369
Kzo9I	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
LguI	GCTCTTC	1 cut(s)	1063
LmnI	GCTCC	4 cut(s)	2057, 2454, 2786, 3213
LweI	GCATC	5 cut(s)	1508, 1767, 1987, 2665, 3064
MabI	ACCWGGT	1 cut(s)	1657
MaeI	CTAG	8 cut(s)	98, 366, 521, 1802, 2334, 2429, 2568, 3032
MaeII	ACGT	5 cut(s)	1723, 1890, 2675, 2736, 2778
MalI	GATC	9 cut(s)	525, 768, 937, 1371, 1502, 1635, 1881, 2190, 3269
MboI	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
MfeI	CAATTG	2 cut(s)	918, 2965
MflI	RGATCY	3 cut(s)	935, 1500, 2188
MhlI	GDGCHC	3 cut(s)	2451, 2618, 2882
MlsI	TGGCCA	1 cut(s)	1109
MluNI	TGGCCA	1 cut(s)	1109
MlyI	GAGTC	4 cut(s)	470, 2056, 2206, 2331
MmeI	TCCRAC	1 cut(s)	3211
Mox20I	TGGCCA	1 cut(s)	1109
MscI	TGGCCA	1 cut(s)	1109
MseI	TTAA	9 cut(s)	993, 1071, 1974, 2574, 2582, 2598, 2873, 3129, 3141
MslI	CAYNNNNRTG	4 cut(s)	176, 696, 894, 2060
Msp20I	TGGCCA	1 cut(s)	1109
MspA1I	CMGCKG	1 cut(s)	1100
MspCI	CTTAAG	1 cut(s)	1973
MspI	CCGG	5 cut(s)	139, 602, 1196, 1590, 1770
MspR9I	CCNGG	2 cut(s)	1412, 1659
MunI	CAATTG	2 cut(s)	918, 2965
Mva1269I	GAATGC	1 cut(s)	793
MvaI	CCWGG	2 cut(s)	1412, 1659
MvnI	CGCG	2 cut(s)	104, 1264
MwoI	GCNNNNNNNGC	9 cut(s)	113, 224, 563, 929, 1106, 1565, 1586, 1693, 3083
NdeI	CATATG	1 cut(s)	2647
NdeII	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
NheI	GCTAGC	1 cut(s)	2567
NlaIV	GGNNCC	8 cut(s)	510, 689, 969, 1037, 2064, 2470, 2862, 3215
NmuCI	GTSAC	2 cut(s)	1208, 2036
NspI	RCATGY	2 cut(s)	1304, 2546
PaeR7I	CTCGAG	1 cut(s)	962
PaqCI	CACCTGC	1 cut(s)	2248
PceI	AGGCCT	2 cut(s)	2314, 3263
PciI	ACATGT	1 cut(s)	2542
PciSI	GCTCTTC	1 cut(s)	1063
PctI	GAATGC	1 cut(s)	793
PfeI	GAWTC	8 cut(s)	421, 671, 1082, 1739, 2345, 2360, 2523, 2926
PleI	GAGTC	4 cut(s)	470, 2055, 2206, 2331
PpsI	GAGTC	4 cut(s)	470, 2055, 2206, 2331
PpuMI	RGGWCCY	1 cut(s)	967
PscI	ACATGT	1 cut(s)	2542
PshAI	GACNNNNGTC	1 cut(s)	2812
Psp124BI	GAGCTC	1 cut(s)	2451
Psp5II	RGGWCCY	1 cut(s)	967
Psp6I	CCWGG	2 cut(s)	1410, 1657
PspFI	CCCAGC	2 cut(s)	504, 540
PspGI	CCWGG	2 cut(s)	1410, 1657
PspN4I	GGNNCC	8 cut(s)	510, 689, 969, 1037, 2064, 2470, 2862, 3215
PspPI	GGNCC	3 cut(s)	688, 967, 3018
PspPPI	RGGWCCY	1 cut(s)	967
PsrI	GAACNNNNNNTAC	3 cut(s)	33, 2130, 2162
PstI	CTGCAG	1 cut(s)	2097
PstNI	CAGNNNCTG	1 cut(s)	761
PsuI	RGATCY	3 cut(s)	935, 1500, 2188
PvuII	CAGCTG	1 cut(s)	1100
RsaI	GTAC	4 cut(s)	1037, 1546, 2971, 3137
RsaNI	GTAC	4 cut(s)	1036, 1545, 2970, 3136
RseI	CAYNNNNRTG	4 cut(s)	176, 696, 894, 2060
SacI	GAGCTC	1 cut(s)	2451
SalI	GTCGAC	1 cut(s)	2732
SapI	GCTCTTC	1 cut(s)	1063
SaqAI	TTAA	9 cut(s)	993, 1071, 1974, 2574, 2582, 2598, 2873, 3129, 3141
Sau3AI	GATC	9 cut(s)	523, 766, 935, 1369, 1500, 1633, 1879, 2188, 3267
Sau96I	GGNCC	3 cut(s)	688, 967, 3018
SchI	GAGTC	4 cut(s)	470, 2056, 2206, 2331
ScrFI	CCNGG	2 cut(s)	1412, 1659
SduI	GDGCHC	3 cut(s)	2451, 2618, 2882
SexAI	ACCWGGT	1 cut(s)	1657
SfaNI	GCATC	5 cut(s)	1508, 1767, 1987, 2665, 3064
SfcI	CTRYAG	2 cut(s)	2073, 2093
Sfr274I	CTCGAG	1 cut(s)	962
SinI	GGWCC	2 cut(s)	688, 967
SlaI	CTCGAG	1 cut(s)	962
SmiMI	CAYNNNNRTG	4 cut(s)	176, 696, 894, 2060
SmlI	CTYRAG	6 cut(s)	962, 1505, 1973, 2611, 3146, 3292
SmoI	CTYRAG	6 cut(s)	962, 1505, 1973, 2611, 3146, 3292
SseBI	AGGCCT	2 cut(s)	2314, 3263
SsiI	CCGC	6 cut(s)	104, 1264, 1542, 1870, 2399, 2654
SspI	AATATT	1 cut(s)	1702
SspMI	CTAG	8 cut(s)	98, 366, 521, 1802, 2334, 2429, 2568, 3032
SstI	GAGCTC	1 cut(s)	2451
StuI	AGGCCT	2 cut(s)	2314, 3263
StyD4I	CCNGG	2 cut(s)	1410, 1657
StyI	CCWWGG	5 cut(s)	97, 265, 1734, 2550, 2832
TaiI	ACGT	5 cut(s)	1726, 1893, 2678, 2739, 2781
TaqI	TCGA	7 cut(s)	696, 723, 963, 1484, 2415, 2733, 3266
TatI	WGTACW	2 cut(s)	2969, 3135
TauI	GCSGC	2 cut(s)	107, 2656
TfiI	GAWTC	8 cut(s)	421, 671, 1082, 1739, 2345, 2360, 2523, 2926
Tru1I	TTAA	9 cut(s)	993, 1071, 1974, 2574, 2582, 2598, 2873, 3129, 3141
Tru9I	TTAA	9 cut(s)	993, 1071, 1974, 2574, 2582, 2598, 2873, 3129, 3141
TseFI	GTSAC	2 cut(s)	1208, 2036
Tsp45I	GTSAC	2 cut(s)	1208, 2036
TspGWI	ACGGA	2 cut(s)	874, 2717
Vha464I	CTTAAG	1 cut(s)	1973
VpaK11BI	GGWCC	2 cut(s)	688, 967
XagI	CCTNNNNNAGG	1 cut(s)	1662
XapI	RAATTY	4 cut(s)	22, 997, 1239, 2386
XbaI	TCTAGA	2 cut(s)	2333, 2428
XceI	RCATGY	2 cut(s)	1304, 2546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	496
XhoI	CTCGAG	1 cut(s)	962
XmaJI	CCTAGG	1 cut(s)	97
XmiI	GTMKAC	2 cut(s)	2733, 3298
XspI	CTAG	8 cut(s)	98, 366, 521, 1802, 2334, 2429, 2568, 3032
ZraI	GACGTC	1 cut(s)	2737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.