Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007716.1

Orthogroup ID

OG0004782

Physical Location & Seq

Genomic Coordinates Forward (+)

13387 .. 26025

Gene Structure 12639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007716.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3123 bp

atgagtttgaattcgtcaaaatcgtctggttcaaaatccaagcgaagcttcaattccaacaattccactaacaacaacaagaagaagacgaagattagcaccaatcagaaaaccctaggcggcgtctcttggggagccaattctctctcctcctctcgctcctccttccaaagatccccctttcccgatttcggcagttatatggtagagaagaacaggaaactgcagaatcagtttgatagtgaagcttcgagttgtttggggtccgagaggagtatttttcgtggggtttcgattttcgtagatggtttcacagtgccttctagtcaggaactgagagcgtacatggtgaattatggtggtagatatgagaattacttttcaaggcgtcgtgttacacatatcatctgcagtaatcttcctgacagtaaaataaaaaatctgaggtctttcagtggagggctcccagttgtgaagcctaactggattgtagattcagttgctgctaacaaactcttgagttgggttccttaccaacttgagcaggtttcttgtaaccaaccaaggttgtcagccttctttgctccaaagataatccccaactgtgatgatgctttgagagatacatctgatcaagtgaaacctgaaagtgaggatacatctttggtaggaaccagattagaagatgataacaagtcagtatgcagatccactgaacacgaacaggaaagtagcggagaatctgatgatatgatatatgaaaacaccgatggacaatttggtgaggagttgtatacaggtgaaaaatattctgaagttaaacaagaagaaacgcctacttcagatgcagaagataatgtcagcataaaggatgaatttaaatctagtacccaccagcactctgcttcagttagcagtaactgcttgccaagctcagaaaattttgggtctaatcgaagtcattcaactcttggggatcccaattttgtggaaaattattttaagagctcaaggctgcactttataggaacctggagaaatcggtatcgcaagcgttttcctagttcgtctaaagggttggacaacacagattctaaccgttgtgctccttatagttctctgaagactcccattatacatattgacatggactgtttttttgtgtccgtggtcatcaggcaacgccctgaacttaaggataggcctgtagctgtatgtcattctgataatccaaagggcactgctgaaatttcgtctgcaaactaccctgctcgagattatggagtgagggctgggatgtttgtcagagatgctaaggcactttgtccacaccttgtcattcttccttatgattttgaagcgtatgaggaggcagtaagctgtgatgaagcatttttagatgtcacatacttggaaggggtagatatggatatgttagcctcaactgtaagacaagagatttttgagactactggatgcactgcaagtgctggcatagctagaaatatgctgatggctcgccttgcaacaagaactgctaaaccagatggtcaatgcaacattcctcccgaaagggtggatgattatttatatgaacttcccatcaagacgcttccaggaataggacacgttctagaggagaagttgaagaagcgaaatgttttgacgtgtggacagttgcgtatgattcctaaggactctcttcaaaaggacttcggaataaaaactggggagatgttgtggaatcatagtagaggcatagataatcggctagttggggtgattcaggaaagtaagtctattggtgctgaagtgaattgggatgtcaaggagattcgaggtattggtttgcaagtttccaagcttgagagtgtagatgcttcaaagcaaggacttggaaaaaactctttgaaatcgtggctccaatctgccaaaacaagtacagaagaacaatccaatacttattctgtagatgatgggaagagggcgcatgcagattgtgagggtcagggaactcatcgaacttcaggccagctatgcggaaattcacttggtattccaactccagtggacaatcatcggtgtagtggtgaaacttctgtgaaccaggtttcagcaccaccacctttatgtcatcttgatttaggagttattgaaagtcttcctccagaactttttacggaattaaacgggatctatggtggcaagttggttgattttgttgctaaaaataaacgagaattcagtgcaacaacatctcatgaacgagtagatggtgcaaagaacgggagtgagagtcatctcttcaatgatatgcacctgcaggatgaaaatgtattagaacccaagcatacagttgtagaaaaacaagcaatgccttcttctgtgggagggtccagtgatgtggcagcttcaacatcaggtcttggaaatactgatataatgcctgcatctttaagtcaagtagatcccttggtgttgcaacaattacctcaagaactgagagttgacttacttgagcagcttcctgcacacaggagatatgacttagcttcaagtgctgcctcggaccctcttgcagagatacctggagaatcaataggtatgagggacggaaatcattctggatcacatgatcttgcatttaacaagctttggattggaaatcctccacagtgggttgaagagttcaaagccagcaaatgcatgatattaaatattcttgctgagatgtatgacaaatcagggtcaagtggaaacttatctgtaattctgcgcagtactatcatggaatgtcaacatcctctagattcaagttctgactgttggattcaagctgtatacagcttctctgagcttctcaggcagtatgttacattaaagatcgactcagatattgaagagatctatgtttgttttcggcttcttagaaggtttacaacgaagtcaaagtttttcttacaagtatatagtgatgtctttccttaccttcagactcgtggtgctgctaatgcacttcttggtaaatgtggacttgccttcaacgtgtggcataagaaagatgaattggacttccattttctgaagttgccgagtctcgatggaatctcgatggaagtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000731 GO:0002200 GO:0002206 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002565 GO:0003674 GO:0003824 GO:0003887 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016043 GO:0016444 GO:0016445 GO:0016740 GO:0016772 GO:0016779 GO:0017125 GO:0018130 GO:0019438 GO:0019985 GO:0031974 GO:0031981 GO:0032042 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0035822 GO:0035861 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043504 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0070013 GO:0070987 GO:0071704 GO:0071840 GO:0071897 GO:0090304 GO:0090734 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

BRCT_2 IMS IMS_C IMS_HHH LIG3_BRCT

Protein Analysis

1040

Amino Acids

115.43

Weight (kDa)

5.8

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44750 AT5G44750
fragaria_vesca	FvH4_1g23540 FvH4_2g04972
malus_domestica	MD05G1091100.v1.1 MD10G1098400.v1.1
prunus_persica	Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1
pyrus_communis	pycom10g08430
rosa_chinensis	RchiOBHm_Chr6g0254741
rosa_laevigata	RLG00000014893
rosa_multiflora	Rmu_sc0007716.1_g000003
rosa_roxburghii	Rroxscaffold_7G00210560
rosa_rugosa	Rorug05G0554600
rosa_samantha	Rh6AG071600 Rh6BG063800 Rh6CG063200 Rh6DG060300
rosa_wichuraiana	Rw6G006270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2328
Acc16I	TGCGCA	1 cut(s)	2777
Acc36I	ACCTGC	2 cut(s)	535, 2328
AccI	GTMKAC	2 cut(s)	794, 2841
AciI	CCGC	3 cut(s)	120, 735, 2040
AclWI	GGATC	7 cut(s)	168, 702, 971, 984, 2201, 2462, 2635
AcsI	RAATTY	6 cut(s)	10, 875, 940, 1248, 2044, 2240
AcuI	CTGAAG	8 cut(s)	825, 834, 891, 1142, 1830, 2010, 2975, 3104
AcyI	GRCGYC	2 cut(s)	123, 388
AfaI	GTAC	4 cut(s)	344, 889, 1942, 2782
AfiI	CCNNNNNNNGG	2 cut(s)	191, 1622
AflII	CTTAAG	1 cut(s)	1193
AflIII	ACRYGT	3 cut(s)	1627, 1667, 3045
AjiI	CACGTC	1 cut(s)	1668
AjnI	CCWGG	4 cut(s)	1031, 1615, 2106, 2587
AjuI	GAANNNNNNNTTGG	4 cut(s)	32, 64, 3050, 3082
Alw21I	GWGCWC	2 cut(s)	1010, 1108
Alw26I	GTCTC	3 cut(s)	130, 1460, 3101
AlwI	GGATC	7 cut(s)	168, 702, 971, 984, 2201, 2462, 2635
AlwNI	CAGNNNCTG	3 cut(s)	334, 503, 921
Ama87I	CYCGRG	1 cut(s)	1272
AoxI	GGCC	2 cut(s)	1202, 2029
ApeKI	GCWGC	6 cut(s)	503, 1015, 2408, 2521, 2561, 3005
ApoI	RAATTY	6 cut(s)	10, 875, 940, 1248, 2044, 2240
ArsI	GACNNNNNNTTYG	2 cut(s)	1142, 1174
Asp700I	GAANNNNTTC	3 cut(s)	961, 2160, 2620
AspA2I	CCTAGG	1 cut(s)	115
AspLEI	GCGC	2 cut(s)	1990, 2778
AspS9I	GGNCC	3 cut(s)	264, 2394, 2569
AsuHPI	GGTGA	5 cut(s)	361, 794, 812, 1792, 2102
AvaI	CYCGRG	1 cut(s)	1272
AvaII	GGWCC	3 cut(s)	264, 2394, 2569
AvrII	CCTAGG	1 cut(s)	115
AxyI	CCTNAGG	1 cut(s)	1692
BaeGI	GKGCMC	1 cut(s)	1241
BamHI	GGATCC	1 cut(s)	976
BanII	GRGCYC	2 cut(s)	465, 1010
BauI	CACGAG	1 cut(s)	2997
BbsI	GAAGAC	3 cut(s)	92, 1130, 2153
Bbv12I	GWGCWC	2 cut(s)	1010, 1108
BbvI	GCAGC	6 cut(s)	490, 1002, 2420, 2533, 2548, 2992
BccI	CCATC	9 cut(s)	299, 764, 1507, 1541, 1610, 1970, 2267, 3095, 3106
BciT130I	CCWGG	4 cut(s)	1033, 1617, 2108, 2589
BciVI	GTATCC	1 cut(s)	649
BclI	TGATCA	1 cut(s)	631
BcoDI	GTCTC	3 cut(s)	130, 1460, 3101
BfaI	CTAG	8 cut(s)	116, 324, 885, 1062, 1500, 1634, 1772, 2807
BfmI	CTRYAG	5 cut(s)	224, 409, 1206, 1968, 2321
BfrI	CTTAAG	1 cut(s)	1193
BfuAI	ACCTGC	2 cut(s)	535, 2328
BfuI	GTATCC	1 cut(s)	649
BglII	AGATCT	1 cut(s)	2904
BisI	GCNGC	7 cut(s)	121, 504, 1016, 2409, 2522, 2562, 3006
BlnI	CCTAGG	1 cut(s)	115
BlsI	GCNGC	7 cut(s)	122, 505, 1017, 2410, 2523, 2563, 3007
BmcAI	AGTACT	1 cut(s)	2782
Bme1390I	CCNGG	4 cut(s)	1033, 1617, 2108, 2589
Bme18I	GGWCC	3 cut(s)	264, 2394, 2569
BmeT110I	CYCGRG	1 cut(s)	1272
BmgBI	CACGTC	1 cut(s)	1668
BmgT120I	GGNCC	3 cut(s)	264, 2394, 2569
BmrFI	CCNGG	4 cut(s)	1033, 1617, 2108, 2589
BmrI	ACTGGG	2 cut(s)	461, 1737
BmsI	GCATC	6 cut(s)	601, 835, 1300, 1466, 1867, 2459
BmuI	ACTGGG	2 cut(s)	461, 1737
BpiI	GAAGAC	3 cut(s)	92, 1130, 2153
BpmI	CTGGAG	4 cut(s)	1054, 2049, 2151, 2610
Bpu10I	CCTNAGC	1 cut(s)	1314
BpuEI	CTTGAG	6 cut(s)	538, 560, 994, 1886, 2478, 2537
BsaHI	GRCGYC	2 cut(s)	123, 388
BsaJI	CCNNGG	5 cut(s)	115, 563, 1167, 2472, 2565
BsaXI	ACNNNNNCTCC	4 cut(s)	1724, 1754, 2281, 2311
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 1622
Bse1I	ACTGG	6 cut(s)	467, 488, 1477, 1732, 2066, 2397
Bse21I	CCTNAGG	1 cut(s)	1692
Bse3DI	GCAATG	1 cut(s)	2379
BseBI	CCWGG	4 cut(s)	1033, 1617, 2108, 2589
BseDI	CCNNGG	5 cut(s)	115, 563, 1167, 2472, 2565
BseGI	GGATG	7 cut(s)	877, 1302, 1481, 1585, 1828, 2332, 2800
BseLI	CCNNNNNNNGG	2 cut(s)	191, 1622
BseMI	GCAATG	1 cut(s)	2379
BseMII	CTCAG	8 cut(s)	326, 434, 948, 2492, 2718, 2844, 2875, 2904
BseNI	ACTGG	6 cut(s)	467, 488, 1477, 1732, 2066, 2397
BseRI	GAGGAG	7 cut(s)	139, 142, 151, 286, 800, 1382, 1652
BseSI	GKGCMC	1 cut(s)	1241
BseXI	GCAGC	6 cut(s)	490, 1002, 2420, 2533, 2548, 2992
BseYI	CCCAGC	1 cut(s)	1292
BsgI	GTGCAG	2 cut(s)	1001, 2514
BshFI	GGCC	2 cut(s)	1204, 2031
BsiHKAI	GWGCWC	2 cut(s)	1010, 1108
BsiHKCI	CYCGRG	1 cut(s)	1272
BslFI	GGGAC	1 cut(s)	2624
BslI	CCNNNNNNNGG	2 cut(s)	191, 1622
BsmAI	GTCTC	3 cut(s)	130, 1460, 3101
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	1 cut(s)	2624
BsnI	GGCC	2 cut(s)	1204, 2031
BsoBI	CYCGRG	1 cut(s)	1272
Bsp1286I	GDGCHC	4 cut(s)	465, 1010, 1108, 1241
BspACI	CCGC	3 cut(s)	120, 735, 2040
BspANI	GGCC	2 cut(s)	1204, 2031
BspCNI	CTCAG	8 cut(s)	327, 435, 947, 2493, 2719, 2845, 2874, 2903
BspHI	TCATGA	1 cut(s)	2260
BspMAI	CTGCAG	3 cut(s)	228, 413, 2325
BspMI	ACCTGC	2 cut(s)	535, 2328
BspPI	GGATC	7 cut(s)	168, 702, 971, 984, 2201, 2462, 2635
BspTI	CTTAAG	1 cut(s)	1193
BsrDI	GCAATG	1 cut(s)	2379
BsrI	ACTGG	6 cut(s)	467, 488, 1477, 1732, 2066, 2397
BssECI	CCNNGG	5 cut(s)	115, 563, 1167, 2472, 2565
BssNAI	GTATAC	2 cut(s)	795, 2842
BssNI	GRCGYC	2 cut(s)	123, 388
BssSI	CACGAG	1 cut(s)	2997
BssT1I	CCWWGG	3 cut(s)	115, 563, 2472
Bst1107I	GTATAC	2 cut(s)	795, 2842
Bst2BI	CACGAG	1 cut(s)	2997
Bst2UI	CCWGG	4 cut(s)	1033, 1617, 2108, 2589
Bst6I	CTCTTC	5 cut(s)	1707, 1976, 2309, 2679, 2895
BstACI	GRCGYC	2 cut(s)	123, 388
BstAFI	CTTAAG	1 cut(s)	1193
BstAPI	GCANNNNNTGC	1 cut(s)	921
BstC8I	GCNNGC	8 cut(s)	926, 1052, 1492, 1519, 1992, 2033, 2448, 2698
BstDSI	CCRYGG	1 cut(s)	1167
BstF5I	GGATG	7 cut(s)	877, 1302, 1481, 1585, 1828, 2332, 2800
BstHHI	GCGC	2 cut(s)	1990, 2778
BstMAI	GTCTC	3 cut(s)	130, 1460, 3101
BstMWI	GCNNNNNNNGC	9 cut(s)	581, 921, 930, 1496, 1523, 2037, 2558, 2863, 3011
BstNI	CCWGG	4 cut(s)	1033, 1617, 2108, 2589
BstNSI	RCATGY	1 cut(s)	1994
BstSCI	CCNGG	4 cut(s)	1031, 1615, 2106, 2587
BstSFI	CTRYAG	5 cut(s)	224, 409, 1206, 1968, 2321
BstSLI	GKGCMC	1 cut(s)	1241
BstV1I	GCAGC	6 cut(s)	490, 1002, 2420, 2533, 2548, 2992
BstV2I	GAAGAC	3 cut(s)	92, 1130, 2153
BstX2I	RGATCY	6 cut(s)	173, 707, 976, 2193, 2467, 2904
BstXI	CCANNNNNNTGG	2 cut(s)	988, 2404
BstYI	RGATCY	6 cut(s)	173, 707, 976, 2193, 2467, 2904
BstZ17I	GTATAC	2 cut(s)	795, 2842
Bsu36I	CCTNAGG	1 cut(s)	1692
BsuI	GTATCC	1 cut(s)	649
BsuRI	GGCC	2 cut(s)	1204, 2031
BtgI	CCRYGG	1 cut(s)	1167
BtrI	CACGTC	1 cut(s)	1668
BtsCI	GGATG	7 cut(s)	877, 1302, 1481, 1585, 1828, 2332, 2800
BtsI	GCAGTG	2 cut(s)	1239, 1479
BtsIMutI	CAGTG	9 cut(s)	321, 460, 711, 1239, 1479, 2073, 2251, 2404, 2681
BveI	ACCTGC	2 cut(s)	535, 2328
Cac8I	GCNNGC	8 cut(s)	926, 1052, 1492, 1519, 1992, 2033, 2448, 2698
CaiI	CAGNNNCTG	3 cut(s)	334, 503, 921
CciI	TCATGA	1 cut(s)	2260
CfoI	GCGC	2 cut(s)	1990, 2778
Cfr13I	GGNCC	3 cut(s)	264, 2394, 2569
CseI	GACGC	3 cut(s)	112, 377, 1618
CsiI	ACCWGGT	1 cut(s)	2106
Csp6I	GTAC	4 cut(s)	343, 888, 1941, 2781
CspCI	CAANNNNNGTGG	2 cut(s)	2049, 2084
CviAII	CATG	7 cut(s)	346, 1147, 1991, 2261, 2633, 2707, 2788
CviQI	GTAC	4 cut(s)	343, 888, 1941, 2781
DraI	TTTAAA	1 cut(s)	880
Eam1104I	CTCTTC	5 cut(s)	1707, 1976, 2309, 2679, 2895
EarI	CTCTTC	5 cut(s)	1707, 1976, 2309, 2679, 2895
Ecl136II	GAGCTC	1 cut(s)	1008
Eco130I	CCWWGG	3 cut(s)	115, 563, 2472
Eco147I	AGGCCT	1 cut(s)	1204
Eco24I	GRGCYC	2 cut(s)	465, 1010
Eco47I	GGWCC	3 cut(s)	264, 2394, 2569
Eco53kI	GAGCTC	1 cut(s)	1008
Eco57I	CTGAAG	8 cut(s)	825, 834, 891, 1142, 1830, 2010, 2975, 3104
Eco81I	CCTNAGG	1 cut(s)	1692
Eco88I	CYCGRG	1 cut(s)	1272
EcoICRI	GAGCTC	1 cut(s)	1008
EcoRI	GAATTC	2 cut(s)	10, 2240
EcoRII	CCWGG	4 cut(s)	1031, 1615, 2106, 2587
EcoT14I	CCWWGG	3 cut(s)	115, 563, 2472
EcoT22I	ATGCAT	1 cut(s)	2708
EcoT38I	GRGCYC	2 cut(s)	465, 1010
ErhI	CCWWGG	3 cut(s)	115, 563, 2472
Esp3I	CGTCTC	1 cut(s)	130
FaeI	CATG	7 cut(s)	349, 1150, 1994, 2264, 2636, 2710, 2791
FalI	AAGNNNNNCTT	4 cut(s)	32, 64, 2942, 2974
FaqI	GGGAC	1 cut(s)	2624
FatI	CATG	7 cut(s)	345, 1146, 1990, 2260, 2632, 2706, 2787
FbaI	TGATCA	1 cut(s)	631
FblI	GTMKAC	2 cut(s)	794, 2841
Fnu4HI	GCNGC	7 cut(s)	121, 504, 1016, 2409, 2522, 2562, 3006
FokI	GGATG	7 cut(s)	884, 1309, 1488, 1592, 1835, 2339, 2787
FriOI	GRGCYC	2 cut(s)	465, 1010
Fsp4HI	GCNGC	7 cut(s)	121, 504, 1016, 2409, 2522, 2562, 3006
FspBI	CTAG	8 cut(s)	116, 324, 885, 1062, 1500, 1634, 1772, 2807
FspI	TGCGCA	1 cut(s)	2777
GlaI	GCGC	2 cut(s)	1989, 2777
GluI	GCNGC	7 cut(s)	121, 504, 1016, 2409, 2522, 2562, 3006
GsaI	CCCAGC	1 cut(s)	1296
GsuI	CTGGAG	4 cut(s)	1054, 2049, 2151, 2610
HaeIII	GGCC	2 cut(s)	1204, 2031
HgaI	GACGC	3 cut(s)	112, 377, 1618
HhaI	GCGC	2 cut(s)	1990, 2778
Hin1I	GRCGYC	2 cut(s)	123, 388
Hin1II	CATG	7 cut(s)	349, 1150, 1994, 2264, 2636, 2710, 2791
Hin6I	GCGC	2 cut(s)	1988, 2776
HinP1I	GCGC	2 cut(s)	1988, 2776
HincII	GTYRAC	2 cut(s)	2509, 2798
HindII	GTYRAC	2 cut(s)	2509, 2798
HindIII	AAGCTT	4 cut(s)	46, 246, 1862, 2651
HphI	GGTGA	5 cut(s)	361, 794, 812, 1792, 2102
Hpy99I	CGWCG	1 cut(s)	393
HpyAV	CCTTC	8 cut(s)	175, 330, 586, 1409, 2388, 2925, 2999, 3049
HpyCH4IV	ACGT	3 cut(s)	1629, 1667, 3045
HpyF10VI	GCNNNNNNNGC	9 cut(s)	581, 921, 930, 1496, 1523, 2037, 2558, 2863, 3011
HpySE526I	ACGT	3 cut(s)	1629, 1667, 3045
Hsp92I	GRCGYC	2 cut(s)	123, 388
Hsp92II	CATG	7 cut(s)	349, 1150, 1994, 2264, 2636, 2710, 2791
HspAI	GCGC	2 cut(s)	1988, 2776
Ksp22I	TGATCA	1 cut(s)	631
LmnI	GCTCC	6 cut(s)	134, 164, 468, 589, 1111, 1926
Lsp1109I	GCAGC	6 cut(s)	490, 1002, 2420, 2533, 2548, 2992
LweI	GCATC	6 cut(s)	601, 835, 1300, 1466, 1867, 2459
MabI	ACCWGGT	1 cut(s)	2106
MaeI	CTAG	8 cut(s)	116, 324, 885, 1062, 1500, 1634, 1772, 2807
MaeII	ACGT	3 cut(s)	1629, 1667, 3045
MaeIII	GTNAC	5 cut(s)	394, 554, 917, 1402, 2872
MflI	RGATCY	6 cut(s)	173, 707, 976, 2193, 2467, 2904
MhlI	GDGCHC	4 cut(s)	465, 1010, 1108, 1241
MlyI	GAGTC	6 cut(s)	1120, 1691, 2305, 2882, 2989, 3103
MmeI	TCCRAC	4 cut(s)	81, 1059, 2084, 2807
Mph1103I	ATGCAT	1 cut(s)	2708
MroXI	GAANNNNTTC	3 cut(s)	961, 2160, 2620
MseI	TTAA	9 cut(s)	819, 879, 1002, 1194, 2186, 2456, 2646, 2714, 2879
MslI	CAYNNNNRTG	1 cut(s)	2128
MspCI	CTTAAG	1 cut(s)	1193
MspR9I	CCNGG	4 cut(s)	1033, 1617, 2108, 2589
MvaI	CCWGG	4 cut(s)	1033, 1617, 2108, 2589
MwoI	GCNNNNNNNGC	9 cut(s)	581, 921, 930, 1496, 1523, 2037, 2558, 2863, 3011
NlaIII	CATG	7 cut(s)	349, 1150, 1994, 2264, 2636, 2710, 2791
NmeAIII	GCCGAG	1 cut(s)	3117
NmuCI	GTSAC	1 cut(s)	1402
NsbI	TGCGCA	1 cut(s)	2777
NsiI	ATGCAT	1 cut(s)	2708
NspI	RCATGY	1 cut(s)	1994
PaeI	GCATGC	1 cut(s)	1994
PaeR7I	CTCGAG	1 cut(s)	1272
PagI	TCATGA	1 cut(s)	2260
PaqCI	CACCTGC	1 cut(s)	2328
PceI	AGGCCT	1 cut(s)	1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	20
PdmI	GAANNNNTTC	3 cut(s)	961, 2160, 2620
PfoI	TCCNGGA	1 cut(s)	1615
PkrI	GCNGC	7 cut(s)	122, 505, 1017, 2410, 2523, 2563, 3007
PleI	GAGTC	6 cut(s)	1120, 1691, 2304, 2882, 2989, 3102
PpsI	GAGTC	6 cut(s)	1120, 1691, 2304, 2882, 2989, 3102
Psp124BI	GAGCTC	1 cut(s)	1010
Psp6I	CCWGG	4 cut(s)	1031, 1615, 2106, 2587
PspFI	CCCAGC	1 cut(s)	1292
PspGI	CCWGG	4 cut(s)	1031, 1615, 2106, 2587
PspPI	GGNCC	3 cut(s)	264, 2394, 2569
PstI	CTGCAG	3 cut(s)	228, 413, 2325
PstNI	CAGNNNCTG	3 cut(s)	334, 503, 921
PsuI	RGATCY	6 cut(s)	173, 707, 976, 2193, 2467, 2904
RsaI	GTAC	4 cut(s)	344, 889, 1942, 2782
RsaNI	GTAC	4 cut(s)	343, 888, 1941, 2781
RseI	CAYNNNNRTG	1 cut(s)	2128
SacI	GAGCTC	1 cut(s)	1010
SaqAI	TTAA	9 cut(s)	819, 879, 1002, 1194, 2186, 2456, 2646, 2714, 2879
SatI	GCNGC	7 cut(s)	121, 504, 1016, 2409, 2522, 2562, 3006
Sau96I	GGNCC	3 cut(s)	264, 2394, 2569
SbfI	CCTGCAGG	1 cut(s)	2325
ScaI	AGTACT	1 cut(s)	2782
SchI	GAGTC	6 cut(s)	1120, 1691, 2305, 2882, 2989, 3103
ScrFI	CCNGG	4 cut(s)	1033, 1617, 2108, 2589
SdaI	CCTGCAGG	1 cut(s)	2325
SduI	GDGCHC	4 cut(s)	465, 1010, 1108, 1241
SexAI	ACCWGGT	1 cut(s)	2106
SfaNI	GCATC	6 cut(s)	601, 835, 1300, 1466, 1867, 2459
SfcI	CTRYAG	5 cut(s)	224, 409, 1206, 1968, 2321
Sfr274I	CTCGAG	1 cut(s)	1272
SinI	GGWCC	3 cut(s)	264, 2394, 2569
SlaI	CTCGAG	1 cut(s)	1272
SmiI	ATTTAAAT	1 cut(s)	880
SmiMI	CAYNNNNRTG	1 cut(s)	2128
SmlI	CTYRAG	8 cut(s)	517, 539, 1009, 1193, 1272, 1865, 2493, 2516
SmoI	CTYRAG	8 cut(s)	517, 539, 1009, 1193, 1272, 1865, 2493, 2516
SphI	GCATGC	1 cut(s)	1994
Sse8387I	CCTGCAGG	1 cut(s)	2325
SseBI	AGGCCT	1 cut(s)	1204
SsiI	CCGC	3 cut(s)	120, 735, 2040
SspI	AATATT	2 cut(s)	809, 2719
SspMI	CTAG	8 cut(s)	116, 324, 885, 1062, 1500, 1634, 1772, 2807
SstI	GAGCTC	1 cut(s)	1010
StuI	AGGCCT	1 cut(s)	1204
StyD4I	CCNGG	4 cut(s)	1031, 1615, 2106, 2587
StyI	CCWWGG	3 cut(s)	115, 563, 2472
SwaI	ATTTAAAT	1 cut(s)	880
TaiI	ACGT	3 cut(s)	1632, 1670, 3048
TaqI	TCGA	9 cut(s)	251, 293, 955, 1273, 1837, 2020, 2886, 3099, 3110
TatI	WGTACW	2 cut(s)	1940, 2780
TauI	GCSGC	1 cut(s)	123
Tru1I	TTAA	9 cut(s)	819, 879, 1002, 1194, 2186, 2456, 2646, 2714, 2879
Tru9I	TTAA	9 cut(s)	819, 879, 1002, 1194, 2186, 2456, 2646, 2714, 2879
TscAI	CASTG	9 cut(s)	321, 460, 718, 1246, 1486, 2073, 2251, 2404, 2681
TseFI	GTSAC	1 cut(s)	1402
TseI	GCWGC	6 cut(s)	503, 1015, 2408, 2521, 2561, 3005
Tsp45I	GTSAC	1 cut(s)	1402
TspDTI	ATGAA	7 cut(s)	774, 888, 1401, 1608, 2277, 2343, 3078
TspGWI	ACGGA	3 cut(s)	1156, 2195, 2628
TspRI	CASTG	9 cut(s)	321, 460, 718, 1246, 1486, 2073, 2251, 2404, 2681
Vha464I	CTTAAG	1 cut(s)	1193
VpaK11BI	GGWCC	3 cut(s)	264, 2394, 2569
XapI	RAATTY	6 cut(s)	10, 875, 940, 1248, 2044, 2240
XbaI	TCTAGA	2 cut(s)	1633, 2806
XceI	RCATGY	1 cut(s)	1994
XhoI	CTCGAG	1 cut(s)	1272
XmaJI	CCTAGG	1 cut(s)	115
XmiI	GTMKAC	2 cut(s)	794, 2841
XmnI	GAANNNNTTC	3 cut(s)	961, 2160, 2620
XspI	CTAG	8 cut(s)	116, 324, 885, 1062, 1500, 1634, 1772, 2807
ZrmI	AGTACT	1 cut(s)	2782
Zsp2I	ATGCAT	1 cut(s)	2708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.