AT5G51750

PA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013557
Physical Location & Seq
Forward (+)
21020014 .. 21022903
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G51750.1

Sequence Viewer

Length: 2343 bp
ATGGCTAACAAAAACCCACTTCAAAAACCCTTTCTTTTCATAATCTTATCAATCAATCTCATCTTTCTTCAAGCAGAAACAACTACTCAAATCTCTACCAAGAAGACTTATGTTATCCACATGGATAAATCTGCCATGCCTTTACCTTACACTAATCACCTACAATGGTACTCTTCAAAGATAAACTCTGTAACGCAACATAAATCTCAAGAAGAAGAAGGTAATAACAACAGGATACTCTACACTTACCAGACTGCTTTCCACGGTTTAGCAGCTCAGCTTACTCAAGAAGAAGCAGAGAGGCTTGAGGAAGAAGATGGTGTTGTAGCTGTGATACCTGAGACAAGATACGAGCTTCACACTACAAGAAGTCCAACGTTTCTTGGGTTAGAAAGACAAGAAAGTGAGAGAGTTTGGGCTGAGAGAGTCACCGACCATGATGTGGTAGTTGGTGTTTTAGACACTGGTATCTGGCCTGAGAGTGAGAGCTTCAACGATACAGGTATGTCCCCTGTTCCTGCTACTTGGAGAGGAGCTTGTGAAACTGGAAAAAGATTCTTGAAACGTAACTGCAATAGAAAGATCGTTGGTGCTAGAGTTTTCTATAGAGGCTATGAAGCTGCAACGGGAAAGATCGATGAAGAGCTTGAATATAAGTCACCGAGAGACAGAGATGGTCACGGGACACACACTGCAGCTACTGTAGCTGGCTCACCTGTTAAAGGAGCTAATCTTTTTGGATTTGCTTATGGGACAGCTCGAGGGATGGCTCAAAAGGCTAGAGTTGCTGCTTATAAAGTCTGTTGGGTCGGAGGGTGTTTCAGTTCAGACATTTTGTCGGCTGTTGATCAAGCTGTTGCTGATGGAGTTCAAGTACTCTCTATATCATTAGGTGGTGGGGTCTCTACTTATTCTAGAGACAGTTTGTCTATAGCAACATTTGGAGCAATGGAGATGGGAGTTTTCGTTTCGTGTTCTGCCGGTAATGGAGGTCCTGATCCGATTAGTCTCACTAATGTTTCTCCATGGATCACAACAGTTGGTGCAAGTACTATGGATAGAGATTTTCCAGCAACAGTGAAGATAGGAACTATGAGAACATTCAAAGGAGTGTCACTTTACAAAGGCAGAACAGTTTTGCCTAAGAATAAACAGTATCCTCTGGTTTACTTAGGAAGGAATGCAAGTAGTCCTGATCCAACCTCGTTCTGTCTAGATGGAGCTTTGGATCGGCGCCATGTAGCGGGAAAGATCGTGATATGCGACCGCGGTGTTACTCCACGTGTGCAAAAGGGTCAGGTTGTGAAAAGAGCTGGTGGAATTGGGATGGTTTTAACTAACACTGCAACAAATGGTGAAGAGCTTGTTGCAGATTCTCATATGCTTCCAGCTGTTGCAGTTGGAGAGAAAGAAGGTAAACTAATCAAACAGTACGCGATGACGAGTAAAAAAGCGACAGCGAGTTTAGAGATTCTTGGAACAAGAATTGGTATCAAACCTTCACCAGTTGTAGCAGCGTTCTCTTCAAGAGGACCAAATTTTCTGTCTTTGGAGATCTTGAAACCAGACTTGTTGGCTCCAGGAGTGAATATTCTTGCAGCTTGGACTGGAGACATGGCACCATCGAGTTTATCATCTGATCCAAGGAGGGTTAAGTTCAATATACTGTCTGGAACTTCAATGTCATGTCCTCATGTAAGTGGTGTAGCTGCTTTGATCAAATCAAGGCATCCAGATTGGAGTCCTGCAGCAATCAAATCAGCTCTCATGACAACTGCTTATGTTCATGACAACATGTTTAAGCCTCTTACGGATGCATCAGGAGCAGCTCCTTCATCGCCTTATGATCACGGTGCAGGACATATAGATCCTTTAAGAGCTACAGATCCTGGTTTGGTCTACGACATTGGACCTCAAGAGTATTTTGAATTCCTCTGCACTCAAGATTTAAGTCCATCACAGCTTAAGGTATTCACAAAACATTCAAACAGAACCTGCAAACACACTCTTGCCAAGAATCCGGGAAACTTGAACTACCCGGCGATATCAGCTTTGTTCCCAGAGAACACACATGTTAAAGCTATGACACTTAGAAGAACAGTGACCAATGTTGGTCCTCACATTTCAAGCTACAAGGTTTCTGTCTCGCCATTCAAAGGCGCATCCGTAACTGTCCAGCCCAAAACACTCAACTTCACTTCGAAGCACCAGAAGCTTTCCTACACGGTTACTTTCAGGACAAGGTTCCGGATGAAGAGGCCTGAGTTTGGTGGTCTAGTGTGGAAGAGCACTACACATAAAGTTCGTAGCCCGGTTATCATCACATGGTTGCCTCCTCTGTAG

Protein Analysis

780

Amino Acids

84.95

Weight (kDa)

9.39

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 36 - 120 2.1e-20 Peptidase inhibitor I9
Peptidase_S8 PF00082 146 - 604 1.8e-51 Subtilase family
PA PF02225 385 - 474 1.1e-14 PA domain
fn3_6 PF17766 676 - 774 7.8e-27 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013557)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51750
fragaria_vesca FvH4_7g28501
malus_domestica MD01G1188800.v1.1 MD01G1189100.v1.1 MD01G1189900.v1.1 MD01G1190400.v1.1
prunus_persica Prupe.2G285500_v2.0.a1
pyrus_communis pycom01g20050
rosa_chinensis RchiOBHm_Chr1g0375891
rosa_laevigata RLG00000026646
rosa_multiflora Rmu_sc0001943.1_g000010
rosa_roxburghii Rroxscaffold_4G00282550
rosa_rugosa Rorug01G0392200
rosa_samantha Rh1AG404100 Rh1BG367500 Rh1CG380300 Rh1DG397500
rosa_wichuraiana Rw0G000960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc36I ACCTGC 1 cut(s) 2003
AccB1I GGYRCC 2 cut(s) 1233, 1618
AccB7I CCANNNNNTGG 1 cut(s) 442
AccI GTMKAC 1 cut(s) 1899
AccII CGCG 2 cut(s) 1269, 1436
AccIII TCCGGA 1 cut(s) 2247
AciI CCGC 3 cut(s) 1244, 1267, 1269
AclI AACGTT 1 cut(s) 377
AclWI GGATC 7 cut(s) 992, 1037, 1190, 1236, 1634, 1862, 1880
AcsI RAATTY 2 cut(s) 1537, 1928
AcvI CACGTG 1 cut(s) 1283
AcyI GRCGYC 1 cut(s) 1234
AfaI GTAC 4 cut(s) 170, 876, 1051, 1433
AfiI CCNNNNNNNGG 5 cut(s) 442, 722, 1243, 2156, 2267
AflII CTTAAG 1 cut(s) 1964
AflIII ACRYGT 3 cut(s) 1282, 1794, 2071
AhdI GACNNNNNGTC 2 cut(s) 835, 925
AjnI CCWGG 2 cut(s) 1579, 1888
Alw21I GWGCWC 1 cut(s) 2291
Alw26I GTCTC 7 cut(s) 335, 660, 907, 912, 1013, 1605, 2149
AlwI GGATC 7 cut(s) 992, 1037, 1190, 1236, 1634, 1862, 1880
AlwNI CAGNNNCTG 3 cut(s) 701, 1889, 1995
Ama87I CYCGRG 1 cut(s) 759
Aor13HI TCCGGA 1 cut(s) 2247
AoxI GGCC 2 cut(s) 473, 2258
ApeKI GCWGC 9 cut(s) 272, 620, 695, 788, 1514, 1598, 1709, 1748, 1826
ApoI RAATTY 2 cut(s) 1537, 1928
ArsI GACNNNNNNTTYG 2 cut(s) 1529, 1561
AspLEI GCGC 2 cut(s) 1236, 2162
AspS9I GGNCC 4 cut(s) 992, 1532, 1910, 2114
AsuC2I CCSGG 3 cut(s) 2022, 2039, 2312
AsuHPI GGTGA 6 cut(s) 149, 421, 651, 705, 1367, 1494
AsuII TTCGAA 1 cut(s) 2201
AvaI CYCGRG 1 cut(s) 759
AvaII GGWCC 4 cut(s) 992, 1532, 1910, 2114
BaeI ACNNNNGTAYC 2 cut(s) 451, 484
BanI GGYRCC 2 cut(s) 1233, 1618
BarI GAAGNNNNNNTAC 4 cut(s) 1483, 1515, 2204, 2236
BbrPI CACGTG 1 cut(s) 1283
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 1 cut(s) 2291
BbvI GCAGC 9 cut(s) 284, 607, 707, 775, 1526, 1610, 1696, 1760, 1838
BccI CCATC 9 cut(s) 311, 668, 760, 857, 949, 1211, 1321, 1630, 1963
BciT130I CCWGG 2 cut(s) 1581, 1890
BciVI GTATCC 2 cut(s) 228, 1167
BclI TGATCA 3 cut(s) 847, 1716, 1846
BcnI CCSGG 3 cut(s) 2022, 2039, 2312
BcoDI GTCTC 7 cut(s) 335, 660, 907, 912, 1013, 1605, 2149
BfaI CTAG 5 cut(s) 594, 780, 915, 1214, 2276
BfmI CTRYAG 7 cut(s) 604, 693, 702, 930, 1746, 1881, 2339
BfoI RGCGCY 1 cut(s) 1237
BfrI CTTAAG 1 cut(s) 1964
BfuAI ACCTGC 1 cut(s) 2003
BfuI GTATCC 2 cut(s) 228, 1167
BglII AGATCT 1 cut(s) 1554
BisI GCNGC 9 cut(s) 273, 621, 696, 789, 1515, 1599, 1710, 1749, 1827
BlpI GCTNAGC 1 cut(s) 276
BlsI GCNGC 9 cut(s) 274, 622, 697, 790, 1516, 1600, 1711, 1750, 1828
BmcAI AGTACT 2 cut(s) 876, 1051
Bme1390I CCNGG 5 cut(s) 1581, 1890, 2022, 2039, 2312
Bme18I GGWCC 4 cut(s) 992, 1532, 1910, 2114
BmeRI GACNNNNNGTC 2 cut(s) 835, 925
BmeT110I CYCGRG 1 cut(s) 759
BmgT120I GGNCC 4 cut(s) 992, 1532, 1910, 2114
BmiI GGNNCC 4 cut(s) 1235, 1578, 1620, 2246
BmrFI CCNGG 5 cut(s) 1581, 1890, 2022, 2039, 2312
BmsI GCATC 4 cut(s) 1738, 1804, 1826, 2171
BpiI GAAGAC 1 cut(s) 110
BpmI CTGGAG 2 cut(s) 1563, 1629
Bpu1102I GCTNAGC 1 cut(s) 276
Bpu14I TTCGAA 1 cut(s) 2201
BpuEI CTTGAG 5 cut(s) 192, 270, 326, 1899, 1926
BpuMI CCSGG 3 cut(s) 2022, 2039, 2312
Bsa29I ATCGAT 1 cut(s) 636
BsaAI YACGTR 1 cut(s) 1283
BsaHI GRCGYC 1 cut(s) 1234
BsaI GGTCTC 1 cut(s) 907
BsaJI CCNNGG 4 cut(s) 262, 1025, 1267, 1643
BsaWI WCCGGW 1 cut(s) 2247
BsaXI ACNNNNNCTCC 4 cut(s) 858, 888, 951, 981
Bsc4I CCNNNNNNNGG 5 cut(s) 442, 722, 1243, 2156, 2267
Bse118I RCCGGY 1 cut(s) 980
Bse1I ACTGG 4 cut(s) 469, 550, 1505, 1612
Bse3DI GCAATG 1 cut(s) 954
BseAI TCCGGA 1 cut(s) 2247
BseBI CCWGG 2 cut(s) 1581, 1890
BseCI ATCGAT 1 cut(s) 636
BseDI CCNNGG 4 cut(s) 262, 1025, 1267, 1643
BseGI GGATG 6 cut(s) 771, 1332, 1729, 1819, 2162, 2256
BseLI CCNNNNNNNGG 5 cut(s) 442, 722, 1243, 2156, 2267
BseMI GCAATG 1 cut(s) 954
BseMII CTCAG 5 cut(s) 290, 330, 411, 468, 2253
BseNI ACTGG 4 cut(s) 469, 550, 1505, 1612
BseRI GAGGAG 2 cut(s) 546, 2325
BseXI GCAGC 9 cut(s) 284, 607, 707, 775, 1526, 1610, 1696, 1760, 1838
BsgI GTGCAG 2 cut(s) 1875, 1921
Bsh1236I CGCG 2 cut(s) 1269, 1436
Bsh1285I CGRYCG 1 cut(s) 1267
BshFI GGCC 2 cut(s) 475, 2260
BshNI GGYRCC 2 cut(s) 1233, 1618
BshVI ATCGAT 1 cut(s) 636
BsiEI CGRYCG 1 cut(s) 1267
BsiHKAI GWGCWC 1 cut(s) 2291
BsiHKCI CYCGRG 1 cut(s) 759
BsiSI CCGG 5 cut(s) 981, 2021, 2039, 2248, 2312
BslFI GGGAC 3 cut(s) 493, 697, 766
BslI CCNNNNNNNGG 5 cut(s) 442, 722, 1243, 2156, 2267
BsmAI GTCTC 7 cut(s) 335, 660, 907, 912, 1013, 1605, 2149
BsmFI GGGAC 3 cut(s) 493, 697, 766
BsmI GAATGC 1 cut(s) 1186
BsnI GGCC 2 cut(s) 475, 2260
Bso31I GGTCTC 1 cut(s) 907
BsoBI CYCGRG 1 cut(s) 759
Bsp119I TTCGAA 1 cut(s) 2201
Bsp1286I GDGCHC 1 cut(s) 2291
Bsp13I TCCGGA 1 cut(s) 2247
Bsp1720I GCTNAGC 1 cut(s) 276
Bsp19I CCATGG 1 cut(s) 1025
BspACI CCGC 3 cut(s) 1244, 1267, 1269
BspANI GGCC 2 cut(s) 475, 2260
BspCNI CTCAG 5 cut(s) 289, 331, 412, 469, 2254
BspDI ATCGAT 1 cut(s) 636
BspEI TCCGGA 1 cut(s) 2247
BspFNI CGCG 2 cut(s) 1269, 1436
BspHI TCATGA 2 cut(s) 1767, 1786
BspLI GGNNCC 4 cut(s) 1235, 1578, 1620, 2246
BspMAI CTGCAG 2 cut(s) 697, 1750
BspMI ACCTGC 1 cut(s) 2003
BspPI GGATC 7 cut(s) 992, 1037, 1190, 1236, 1634, 1862, 1880
BspQI GCTCTTC 3 cut(s) 636, 1353, 2279
BspT104I TTCGAA 1 cut(s) 2201
BspT107I GGYRCC 2 cut(s) 1233, 1618
BspTI CTTAAG 1 cut(s) 1964
BspTNI GGTCTC 1 cut(s) 907
BsrDI GCAATG 1 cut(s) 954
BsrFI RCCGGY 1 cut(s) 980
BsrI ACTGG 4 cut(s) 469, 550, 1505, 1612
BssAI RCCGGY 1 cut(s) 980
BssECI CCNNGG 4 cut(s) 262, 1025, 1267, 1643
BssNI GRCGYC 1 cut(s) 1234
BssT1I CCWWGG 2 cut(s) 1025, 1643
Bst2UI CCWGG 2 cut(s) 1581, 1890
Bst6I CTCTTC 6 cut(s) 178, 636, 1353, 1528, 2249, 2279
BstACI GRCGYC 1 cut(s) 1234
BstAFI CTTAAG 1 cut(s) 1964
BstBAI YACGTR 1 cut(s) 1283
BstBI TTCGAA 1 cut(s) 2201
BstC8I GCNNGC 1 cut(s) 709
BstDEI CTNAG 8 cut(s) 276, 339, 420, 477, 1143, 1171, 2090, 2262
BstDSI CCRYGG 3 cut(s) 262, 1025, 1267
BstENI CCTNNNNNAGG 1 cut(s) 720
BstF5I GGATG 6 cut(s) 771, 1332, 1729, 1819, 2162, 2256
BstFNI CGCG 2 cut(s) 1269, 1436
BstH2I RGCGCY 1 cut(s) 1237
BstHHI GCGC 2 cut(s) 1236, 2162
BstMAI GTCTC 7 cut(s) 335, 660, 907, 912, 1013, 1605, 2149
BstMCI CGRYCG 1 cut(s) 1267
BstMWI GCNNNNNNNGC 6 cut(s) 704, 776, 785, 1823, 2048, 2212
BstNI CCWGG 2 cut(s) 1581, 1890
BstNSI RCATGY 2 cut(s) 1798, 2075
BstSCI CCNGG 5 cut(s) 1579, 1888, 2020, 2037, 2310
BstSFI CTRYAG 7 cut(s) 604, 693, 702, 930, 1746, 1881, 2339
BstUI CGCG 2 cut(s) 1269, 1436
BstV1I GCAGC 9 cut(s) 284, 607, 707, 775, 1526, 1610, 1696, 1760, 1838
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 3 cut(s) 1554, 1867, 1885
BstYI RGATCY 3 cut(s) 1554, 1867, 1885
Bsu15I ATCGAT 1 cut(s) 636
BsuI GTATCC 2 cut(s) 228, 1167
BsuRI GGCC 2 cut(s) 475, 2260
BsuTUI ATCGAT 1 cut(s) 636
BtgI CCRYGG 3 cut(s) 262, 1025, 1267
BtgZI GCGATG 2 cut(s) 1451, 1821
BtsCI GGATG 6 cut(s) 771, 1332, 1729, 1819, 2162, 2256
BtsI GCAGTG 2 cut(s) 690, 1341
BtsIMutI CAGTG 5 cut(s) 462, 690, 1083, 1341, 2106
BveI ACCTGC 1 cut(s) 2003
Cac8I GCNNGC 1 cut(s) 709
CaiI CAGNNNCTG 3 cut(s) 701, 1889, 1995
CciI TCATGA 2 cut(s) 1767, 1786
CfoI GCGC 2 cut(s) 1236, 2162
Cfr10I RCCGGY 1 cut(s) 980
Cfr13I GGNCC 4 cut(s) 992, 1532, 1910, 2114
Cfr42I CCGCGG 1 cut(s) 1270
ClaI ATCGAT 1 cut(s) 636
Csp6I GTAC 4 cut(s) 169, 875, 1050, 1432
CviQI GTAC 4 cut(s) 169, 875, 1050, 1432
DdeI CTNAG 8 cut(s) 276, 339, 420, 477, 1143, 1171, 2090, 2262
DinI GGCGCC 1 cut(s) 1235
DriI GACNNNNNGTC 2 cut(s) 835, 925
Eam1104I CTCTTC 6 cut(s) 178, 636, 1353, 1528, 2249, 2279
Eam1105I GACNNNNNGTC 2 cut(s) 835, 925
EarI CTCTTC 6 cut(s) 178, 636, 1353, 1528, 2249, 2279
Eco130I CCWWGG 2 cut(s) 1025, 1643
Eco147I AGGCCT 1 cut(s) 2260
Eco31I GGTCTC 1 cut(s) 907
Eco32I GATATC 1 cut(s) 2046
Eco47I GGWCC 4 cut(s) 992, 1532, 1910, 2114
Eco72I CACGTG 1 cut(s) 1283
Eco88I CYCGRG 1 cut(s) 759
EcoNI CCTNNNNNAGG 1 cut(s) 720
EcoO109I RGGNCCY 1 cut(s) 992
EcoRI GAATTC 1 cut(s) 1928
EcoRII CCWGG 2 cut(s) 1579, 1888
EcoRV GATATC 1 cut(s) 2046
EcoT14I CCWWGG 2 cut(s) 1025, 1643
EcoT22I ATGCAT 1 cut(s) 1819
EgeI GGCGCC 1 cut(s) 1235
EheI GGCGCC 1 cut(s) 1235
ErhI CCWWGG 2 cut(s) 1025, 1643
FaqI GGGAC 3 cut(s) 493, 697, 766
FauI CCCGC 1 cut(s) 1237
FauNDI CATATG 1 cut(s) 1380
FbaI TGATCA 3 cut(s) 847, 1716, 1846
FblI GTMKAC 1 cut(s) 1899
Fnu4HI GCNGC 9 cut(s) 273, 621, 696, 789, 1515, 1599, 1710, 1749, 1827
FokI GGATG 6 cut(s) 778, 1339, 1716, 1826, 2149, 2263
Fsp4HI GCNGC 9 cut(s) 273, 621, 696, 789, 1515, 1599, 1710, 1749, 1827
FspBI CTAG 5 cut(s) 594, 780, 915, 1214, 2276
GlaI GCGC 2 cut(s) 1235, 2161
GluI GCNGC 9 cut(s) 273, 621, 696, 789, 1515, 1599, 1710, 1749, 1827
GsuI CTGGAG 2 cut(s) 1563, 1629
HaeII RGCGCY 1 cut(s) 1237
HaeIII GGCC 2 cut(s) 475, 2260
HapII CCGG 5 cut(s) 981, 2021, 2039, 2248, 2312
HhaI GCGC 2 cut(s) 1236, 2162
Hin1I GRCGYC 1 cut(s) 1234
Hin6I GCGC 2 cut(s) 1234, 2160
HinP1I GCGC 2 cut(s) 1234, 2160
HindIII AAGCTT 1 cut(s) 2213
HinfI GANTC 6 cut(s) 426, 555, 1373, 1471, 1741, 2017
HpaII CCGG 5 cut(s) 981, 2021, 2039, 2248, 2312
HphI GGTGA 6 cut(s) 149, 421, 651, 705, 1367, 1494
Hpy166II GTNNAC 3 cut(s) 1168, 1418, 1900
Hpy188I TCNGA 4 cut(s) 812, 829, 1002, 1639
Hpy8I GTNNAC 3 cut(s) 1168, 1418, 1900
HpyAV CCTTC 5 cut(s) 212, 1170, 1406, 1509, 1842
HpyCH4IV ACGT 3 cut(s) 377, 565, 1282
HpyF10VI GCNNNNNNNGC 6 cut(s) 704, 776, 785, 1823, 2048, 2212
HpyF3I CTNAG 8 cut(s) 276, 339, 420, 477, 1143, 1171, 2090, 2262
HpySE526I ACGT 3 cut(s) 377, 565, 1282
Hsp92I GRCGYC 1 cut(s) 1234
HspAI GCGC 2 cut(s) 1234, 2160
KasI GGCGCC 1 cut(s) 1233
Kpn2I TCCGGA 1 cut(s) 2247
Ksp22I TGATCA 3 cut(s) 847, 1716, 1846
KspI CCGCGG 1 cut(s) 1270
LguI GCTCTTC 3 cut(s) 636, 1353, 2279
LmnI GCTCC 7 cut(s) 533, 725, 944, 1220, 1582, 1823, 1834
Lsp1109I GCAGC 9 cut(s) 284, 607, 707, 775, 1526, 1610, 1696, 1760, 1838
LweI GCATC 4 cut(s) 1738, 1804, 1826, 2171
MaeI CTAG 5 cut(s) 594, 780, 915, 1214, 2276
MaeII ACGT 3 cut(s) 377, 565, 1282
MflI RGATCY 3 cut(s) 1554, 1867, 1885
MhlI GDGCHC 1 cut(s) 2291
MluCI AATT 4 cut(s) 1320, 1485, 1537, 1928
Mly113I GGCGCC 1 cut(s) 1234
MlyI GAGTC 2 cut(s) 435, 1750
MmeI TCCRAC 4 cut(s) 398, 790, 1223, 1381
Mph1103I ATGCAT 1 cut(s) 1819
MroI TCCGGA 1 cut(s) 2247
MseI TTAA 8 cut(s) 720, 1334, 1653, 1800, 1874, 1949, 1965, 2076
MslI CAYNNNNRTG 1 cut(s) 1698
MspA1I CMGCKG 2 cut(s) 1269, 1391
MspCI CTTAAG 1 cut(s) 1964
MspI CCGG 5 cut(s) 981, 2021, 2039, 2248, 2312
MspR9I CCNGG 5 cut(s) 1581, 1890, 2022, 2039, 2312
Mva1269I GAATGC 1 cut(s) 1186
MvaI CCWGG 2 cut(s) 1581, 1890
MvnI CGCG 2 cut(s) 1269, 1436
MwoI GCNNNNNNNGC 6 cut(s) 704, 776, 785, 1823, 2048, 2212
NarI GGCGCC 1 cut(s) 1234
NciI CCSGG 3 cut(s) 2022, 2039, 2312
NcoI CCATGG 1 cut(s) 1025
NdeI CATATG 1 cut(s) 1380
NlaIV GGNNCC 4 cut(s) 1235, 1578, 1620, 2246
NmuCI GTSAC 5 cut(s) 427, 657, 677, 1113, 2101
NsiI ATGCAT 1 cut(s) 1819
NspI RCATGY 2 cut(s) 1798, 2075
NspV TTCGAA 1 cut(s) 2201
PaeR7I CTCGAG 1 cut(s) 759
PagI TCATGA 2 cut(s) 1767, 1786
PceI AGGCCT 1 cut(s) 2260
PciI ACATGT 2 cut(s) 1794, 2071
PciSI GCTCTTC 3 cut(s) 636, 1353, 2279
PcsI WCGNNNNNNNCGW 1 cut(s) 1260
PctI GAATGC 1 cut(s) 1186
PfeI GAWTC 4 cut(s) 555, 1373, 1471, 2017
PflMI CCANNNNNTGG 1 cut(s) 442
PfoI TCCNGGA 2 cut(s) 1579, 2020
PkrI GCNGC 9 cut(s) 274, 622, 697, 790, 1516, 1600, 1711, 1750, 1828
PleI GAGTC 2 cut(s) 434, 1749
PluTI GGCGCC 1 cut(s) 1237
PmaCI CACGTG 1 cut(s) 1283
PmlI CACGTG 1 cut(s) 1283
PpsI GAGTC 2 cut(s) 434, 1749
Ppu21I YACGTR 1 cut(s) 1283
PpuMI RGGWCCY 1 cut(s) 992
PscI ACATGT 2 cut(s) 1794, 2071
PsiI TTATAA 1 cut(s) 795
Psp1406I AACGTT 1 cut(s) 377
Psp5II RGGWCCY 1 cut(s) 992
Psp6I CCWGG 2 cut(s) 1579, 1888
PspCI CACGTG 1 cut(s) 1283
PspGI CCWGG 2 cut(s) 1579, 1888
PspN4I GGNNCC 4 cut(s) 1235, 1578, 1620, 2246
PspPI GGNCC 4 cut(s) 992, 1532, 1910, 2114
PspPPI RGGWCCY 1 cut(s) 992
PspXI VCTCGAGB 1 cut(s) 759
PstI CTGCAG 2 cut(s) 697, 1750
PstNI CAGNNNCTG 3 cut(s) 701, 1889, 1995
PsuI RGATCY 3 cut(s) 1554, 1867, 1885
PvuII CAGCTG 1 cut(s) 1391
RsaI GTAC 4 cut(s) 170, 876, 1051, 1433
RsaNI GTAC 4 cut(s) 169, 875, 1050, 1432
RseI CAYNNNNRTG 1 cut(s) 1698
SacII CCGCGG 1 cut(s) 1270
SapI GCTCTTC 3 cut(s) 636, 1353, 2279
SaqAI TTAA 8 cut(s) 720, 1334, 1653, 1800, 1874, 1949, 1965, 2076
SatI GCNGC 9 cut(s) 273, 621, 696, 789, 1515, 1599, 1710, 1749, 1827
Sau96I GGNCC 4 cut(s) 992, 1532, 1910, 2114
ScaI AGTACT 2 cut(s) 876, 1051
SchI GAGTC 2 cut(s) 435, 1750
ScrFI CCNGG 5 cut(s) 1581, 1890, 2022, 2039, 2312
SduI GDGCHC 1 cut(s) 2291
SfaNI GCATC 4 cut(s) 1738, 1804, 1826, 2171
SfcI CTRYAG 7 cut(s) 604, 693, 702, 930, 1746, 1881, 2339
SfoI GGCGCC 1 cut(s) 1235
Sfr274I CTCGAG 1 cut(s) 759
Sfr303I CCGCGG 1 cut(s) 1270
SfuI TTCGAA 1 cut(s) 2201
SgrBI CCGCGG 1 cut(s) 1270
SinI GGWCC 4 cut(s) 992, 1532, 1910, 2114
SlaI CTCGAG 1 cut(s) 759
SmiMI CAYNNNNRTG 1 cut(s) 1698
SmlI CTYRAG 7 cut(s) 207, 285, 305, 759, 1914, 1941, 1964
SmoI CTYRAG 7 cut(s) 207, 285, 305, 759, 1914, 1941, 1964
Sse9I AATT 4 cut(s) 1320, 1485, 1537, 1928
SseBI AGGCCT 1 cut(s) 2260
SsiI CCGC 3 cut(s) 1244, 1267, 1269
SspDI GGCGCC 1 cut(s) 1233
SspI AATATT 1 cut(s) 1591
SspMI CTAG 5 cut(s) 594, 780, 915, 1214, 2276
StuI AGGCCT 1 cut(s) 2260
StyD4I CCNGG 5 cut(s) 1579, 1888, 2020, 2037, 2310
StyI CCWWGG 2 cut(s) 1025, 1643
TaiI ACGT 3 cut(s) 380, 568, 1285
TaqI TCGA 4 cut(s) 636, 760, 1625, 2201
TasI AATT 4 cut(s) 1320, 1485, 1537, 1928
TatI WGTACW 2 cut(s) 874, 1049
TfiI GAWTC 4 cut(s) 555, 1373, 1471, 2017
Tru1I TTAA 8 cut(s) 720, 1334, 1653, 1800, 1874, 1949, 1965, 2076
Tru9I TTAA 8 cut(s) 720, 1334, 1653, 1800, 1874, 1949, 1965, 2076
TscAI CASTG 5 cut(s) 469, 697, 1083, 1348, 2106
TseFI GTSAC 5 cut(s) 427, 657, 677, 1113, 2101
TseI GCWGC 9 cut(s) 272, 620, 695, 788, 1514, 1598, 1709, 1748, 1826
Tsp45I GTSAC 5 cut(s) 427, 657, 677, 1113, 2101
TspDTI ATGAA 6 cut(s) 28, 630, 654, 1775, 1824, 2267
TspGWI ACGGA 2 cut(s) 1826, 2155
TspRI CASTG 5 cut(s) 469, 697, 1083, 1348, 2106
Van91I CCANNNNNTGG 1 cut(s) 442
Vha464I CTTAAG 1 cut(s) 1964
VpaK11BI GGWCC 4 cut(s) 992, 1532, 1910, 2114
XagI CCTNNNNNAGG 1 cut(s) 720
XapI RAATTY 2 cut(s) 1537, 1928
XbaI TCTAGA 2 cut(s) 914, 1213
XceI RCATGY 2 cut(s) 1798, 2075
XhoI CTCGAG 1 cut(s) 759
XmiI GTMKAC 1 cut(s) 1899
XspI CTAG 5 cut(s) 594, 780, 915, 1214, 2276
ZrmI AGTACT 2 cut(s) 876, 1051
Zsp2I ATGCAT 1 cut(s) 1819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.