Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011105

Physical Location & Seq

Genomic Coordinates Forward (+)

21401312 .. 21404470

Gene Structure 3159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G52820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGACCATGATGGATACAGACGAAGGGAAGACAGTGATGTGTCTGTTAACAGACCCAGAAGGAACTCATTTAGGTTCTGCCATGTATATTCCTCAAAAGGCTGGTCCTTTGCAACTTACTCAGCTCGTCAATAGGTTCCTTGACAACGAGGAGATGTTACCTTACAGTTTCTATGTATCAGACGAAGAGCTTCTTGTACCAGTTGGAACGTACTTGGAGAAAAACAAAGTGTCTGTGGAGAAGGTTTTGACGATTGTTTATCAACAACAAGCTGTTTTTCGAATTCGTCCTGTTAACCGTTGCTCACAGACAATTGCTGGTCACGCGGAAGCTGTTCTTTGTGTTTCGTTTAGTCCTGATGGAAAGCAATTAGCTAGTGGTTCAGGTGATACTACTGTCAGGCTTTGGGATCTCTACACTGAAACTCCATTGTTTACTTGCAAAGGCCACAAGAATTGGGTTCTCACAGTTGCGTGGTCTCCTGATGGTAAGCATCTTGTGAGTGGTAGTAAATCCGGTGAAATCTGTTGTTGGAATCCAAAGAAAGGAGAACTAGAAGGCAGCCCACTTACGGGTCACAAGAAATGGATTACTGGTATCTCGTGGGAACCAGTCCACCTTAGTTCTCCATGCCGTCGATTTGTGACTTCTAGTAAAGATGGGGATGCAAGGATTTGGGATATTACACTGAAAAAATCTATTATTTGTCTCAGTGGGCACACACTTGCTGTGACTTGTGTCAAATGGGGCGGAGATGGAATTATTTATACAGGTTCGCAAGATTGTACGATTAAGATGTGGGAGACTACTCAGGGGAAGCTTATTCGTGAATTGAAGGGGCATGGGCATTGGATTAACTCCCTTGCGTTGAGCACAGAATATGTTCTTCGAACAGGAGCTTTTGACCACACTGGAAGACAATATCCTCCAAATGAAGAAAAGCAAAAGGCGCTCGAAAGATACAACAAAACAAAAGGGGATTCCCCTGAAAGATTAGTCTCAGGTTCTGATGATTTCACTATGTTCCTTTGGGAACCATCTGTTAGCAAACAACCTAAAAAGCGCTTAACCGGTCATCAACAGCTTGTAAATCATGTCTATTTCTCACCTGATGGGAAATGGATTGCAAGTGCATCGTTCGATAAATCAGTTAGGCTATGGAATGGTATCACAGGACAATTTGTTACAGTTTTCCGGGGACATGTTGGACCTGTTTATCAGGTCAGTTGGTCCGCAGACAGTAGATTGCTTTTGAGTGGCAGTAAAGACTCTACTCTCAAGATATGGGAAATTAGGACGAAAAAGTTAAAACAAGATCTTCCTGGTCATGCAGATGAGGTTTTTGCGGTGGATTGGAGTCCAGATGGAGAGAAAGTAGTTTCTGGTGGTAAAGATAGAGTGTTGAAGCTATGGAAGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005840 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009987 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0042254 GO:0042255 GO:0042273 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0065003 GO:0070013 GO:0070925 GO:0071826 GO:0071840 GO:0080008 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NLE WD40

Protein Analysis

473

Amino Acids

52.9

Weight (kDa)

8.63

Isoelectric Point (pI)

32.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NLE	PF08154	12 - 71	2.2e-08	NLE (NUC135) domain
Beta-prop_Aladin	PF25460	93 - 182	3e-07	Aladin seven-bladed propeller
WD40_CDC20-Fz	PF24807	98 - 166	1.5e-11	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	99 - 138	2.2e-06	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	99 - 157	2.5e-12	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	99 - 204	6.3e-08	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	99 - 180	8.4e-21	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	100 - 184	1.1e-16	TEP-1 second beta-propeller
WD40_Gbeta	PF25391	100 - 235	3.9e-12	G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd	PF25168	100 - 167	8.5e-06	WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	100 - 173	3.4e-07	MABP1/WDR62 first WD40 domain
WD40	PF00400	100 - 137	4.3e-12	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	100 - 228	1.3e-25	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	101 - 143	1.2e-06	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	104 - 188	7.3e-13	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	105 - 234	1.3e-13	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML	PF23409	107 - 300	9e-09	Echinoderm microtubule-associated protein first beta-propeller
WDR55	PF24796	107 - 185	1.3e-06	WDR55
Beta-prop_IFT140_1st	PF23383	108 - 204	1.7e-07	IFT140 first beta-propeller
Beta-prop_WDR3_2nd	PF25172	109 - 273	2.6e-17	WDR3 second beta-propeller domain
Beta-prop_WDR90_POC16_2nd	PF23393	122 - 202	3.1e-06	WDR90/POC16, second beta-propeller
WD40	PF00400	142 - 179	9.6e-10	WD domain, G-beta repeat
EIF3I	PF24805	142 - 229	1e-05	EIF3I
WD40_Prp19	PF24814	144 - 302	4e-19	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	145 - 204	1.9e-08	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	150 - 238	5e-16	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	155 - 306	5.5e-22	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	164 - 281	6.9e-13	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	190 - 303	2.5e-16	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	206 - 313	1.1e-07	WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	212 - 298	4.1e-07	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	212 - 290	5.7e-11	THOC3 beta-propeller domain
WD40_Gbeta	PF25391	213 - 388	1.8e-10	G protein beta WD-40 repeat protein
WD40	PF00400	232 - 267	1.7e-06	WD domain, G-beta repeat
WD40_CDC20-Fz	PF24807	243 - 370	1.3e-07	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	256 - 436	2.2e-12	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	322 - 471	1.1e-17	CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	327 - 472	4e-17	TEP-1 second beta-propeller
WD40_Prp19	PF24814	328 - 471	5.8e-21	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	329 - 472	3.6e-30	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	330 - 405	3.3e-15	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	330 - 395	5.9e-07	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	337 - 399	5.1e-08	WDR36/Utp21 second beta-propeller domain
WDR55	PF24796	351 - 469	1.1e-10	WDR55
WD40	PF00400	351 - 388	7.5e-11	WD domain, G-beta repeat
WD40_Gbeta	PF25391	355 - 470	7.2e-16	G protein beta WD-40 repeat protein
Beta-prop_WDR3_2nd	PF25172	355 - 472	1.6e-17	WDR3 second beta-propeller domain
EIF3I	PF24805	356 - 435	5.4e-12	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	356 - 430	1.4e-06	MABP1/WDR62 second WD40 domain
Beta-prop_WDR5	PF25175	356 - 472	2.3e-33	WDR5 beta-propeller domain
Beta-prop_EML	PF23409	357 - 467	4.4e-07	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3	PF25174	359 - 471	1.4e-27	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	361 - 472	5.1e-18	CDC20/Fizzy WD40 domain
WDR90_beta-prop_4th	PF23342	363 - 467	2.1e-09	WDR90, 4th beta-propeller
WD40	PF00400	392 - 429	8.8e-10	WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd	PF25168	393 - 462	8.7e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_Aladin	PF25460	401 - 472	1.2e-08	Aladin seven-bladed propeller
WD40_WDHD1_1st	PF24817	403 - 472	1e-07	WDHD1 first WD40 domain
WD40	PF00400	435 - 471	1.6e-08	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52820
fragaria_vesca	FvH4_7g01500
malus_domestica	MD02G1305600.v1.1 MD09G1280600.v1.1 MD17G1287700.v1.1
prunus_persica	Prupe.2G020500_v2.0.a1
pyrus_communis	pycom02g25610 pycom17g27070
rosa_chinensis	RchiOBHm_Chr1g0317321
rosa_laevigata	RLG00000029568 RLG00000030606
rosa_multiflora	Rmu_sc0005092.1_g000002 Rmu_sc0013869.1_g000006
rosa_roxburghii	Rroxscaffold_4G00330490
rosa_rugosa	Rorug01G0015900
rosa_samantha	Rh1AG027300 Rh1BG023200 Rh1CG025300 Rh1DG045900
rosa_wichuraiana	Rw1G001910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	326
AciI	CCGC	4 cut(s)	326, 750, 1233, 1346
AclWI	GGATC	1 cut(s)	417
AcsI	RAATTY	1 cut(s)	282
AfaI	GTAC	3 cut(s)	198, 212, 787
AfeI	AGCGCT	1 cut(s)	1064
AfiI	CCNNNNNNNGG	3 cut(s)	545, 571, 572
AflIII	ACRYGT	1 cut(s)	1201
AgeI	ACCGGT	1 cut(s)	1070
AgsI	TTSAA	2 cut(s)	835, 1405
AjnI	CCWGG	1 cut(s)	1321
AluBI	AGCT	9 cut(s)	124, 190, 272, 332, 374, 820, 899, 1084, 1408
AluI	AGCT	9 cut(s)	124, 190, 272, 332, 374, 820, 899, 1084, 1408
Alw21I	GWGCWC	1 cut(s)	875
Alw26I	GTCTC	4 cut(s)	483, 713, 797, 1003
AlwI	GGATC	1 cut(s)	417
AlwNI	CAGNNNCTG	1 cut(s)	1007
Aor51HI	AGCGCT	1 cut(s)	1064
AoxI	GGCC	1 cut(s)	445
ApeKI	GCWGC	1 cut(s)	561
ApoI	RAATTY	1 cut(s)	282
ArsI	GACNNNNNNTTYG	2 cut(s)	88, 120
AsiGI	ACCGGT	1 cut(s)	1070
Asp700I	GAANNNNTTC	3 cut(s)	189, 333, 882
AspLEI	GCGC	2 cut(s)	952, 1065
AspS9I	GGNCC	3 cut(s)	104, 1208, 1230
AsuC2I	CCSGG	1 cut(s)	1196
AsuHPI	GGTGA	3 cut(s)	398, 530, 1098
AsuII	TTCGAA	2 cut(s)	280, 889
AvaII	GGWCC	3 cut(s)	104, 1208, 1230
BaeGI	GKGCMC	1 cut(s)	720
BaeI	ACNNNNGTAYC	2 cut(s)	381, 414
BauI	CACGAG	1 cut(s)	601
BbsI	GAAGAC	2 cut(s)	35, 922
Bbv12I	GWGCWC	1 cut(s)	875
BbvI	GCAGC	1 cut(s)	573
BccI	CCATC	8 cut(s)	4, 353, 479, 653, 749, 1045, 1106, 1358
BceAI	ACGGC	1 cut(s)	618
BcgI	CGANNNNNNTGC	2 cut(s)	1116, 1150
BciT130I	CCWGG	1 cut(s)	1323
BciVI	GTATCC	1 cut(s)	7
BcnI	CCSGG	1 cut(s)	1196
BcoDI	GTCTC	4 cut(s)	483, 713, 797, 1003
BfaI	CTAG	3 cut(s)	375, 554, 651
BfoI	RGCGCY	2 cut(s)	953, 1066
BfuI	GTATCC	1 cut(s)	7
BglII	AGATCT	1 cut(s)	1315
BisI	GCNGC	1 cut(s)	562
BlsI	GCNGC	1 cut(s)	563
Bme1390I	CCNGG	2 cut(s)	1196, 1323
Bme18I	GGWCC	3 cut(s)	104, 1208, 1230
BmgT120I	GGNCC	3 cut(s)	104, 1208, 1230
BmiI	GGNNCC	3 cut(s)	137, 609, 1035
BmrFI	CCNGG	2 cut(s)	1196, 1323
BmsI	GCATC	3 cut(s)	502, 655, 1142
BoxI	GACNNNNGTC	1 cut(s)	737
BpiI	GAAGAC	2 cut(s)	35, 922
Bpu14I	TTCGAA	2 cut(s)	280, 889
BpuEI	CTTGAG	1 cut(s)	1262
BpuMI	CCSGG	1 cut(s)	1196
BsaI	GGTCTC	1 cut(s)	483
BsaJI	CCNNGG	1 cut(s)	1195
BsaWI	WCCGGW	2 cut(s)	515, 1070
BsaXI	ACNNNNNCTCC	4 cut(s)	409, 439, 1359, 1389
Bsc4I	CCNNNNNNNGG	3 cut(s)	545, 571, 572
Bse118I	RCCGGY	1 cut(s)	1070
Bse1I	ACTGG	4 cut(s)	200, 598, 611, 916
BseBI	CCWGG	1 cut(s)	1323
BseDI	CCNNGG	1 cut(s)	1195
BseGI	GGATG	1 cut(s)	670
BseLI	CCNNNNNNNGG	3 cut(s)	545, 571, 572
BseMII	CTCAG	4 cut(s)	134, 724, 824, 1014
BseNI	ACTGG	4 cut(s)	200, 598, 611, 916
BseRI	GAGGAG	1 cut(s)	164
BseSI	GKGCMC	1 cut(s)	720
BseXI	GCAGC	1 cut(s)	573
Bsh1236I	CGCG	1 cut(s)	326
BshFI	GGCC	1 cut(s)	447
BshTI	ACCGGT	1 cut(s)	1070
BsiHKAI	GWGCWC	1 cut(s)	875
BsiSI	CCGG	3 cut(s)	516, 1071, 1195
BslFI	GGGAC	1 cut(s)	1212
BslI	CCNNNNNNNGG	3 cut(s)	545, 571, 572
BsmAI	GTCTC	4 cut(s)	483, 713, 797, 1003
BsmFI	GGGAC	1 cut(s)	1212
BsnI	GGCC	1 cut(s)	447
Bso31I	GGTCTC	1 cut(s)	483
Bsp119I	TTCGAA	2 cut(s)	280, 889
Bsp1286I	GDGCHC	2 cut(s)	720, 875
Bsp143I	GATC	2 cut(s)	409, 1315
BspACI	CCGC	4 cut(s)	326, 750, 1233, 1346
BspANI	GGCC	1 cut(s)	447
BspCNI	CTCAG	4 cut(s)	133, 723, 823, 1013
BspFNI	CGCG	1 cut(s)	326
BspLI	GGNNCC	3 cut(s)	137, 609, 1035
BspPI	GGATC	1 cut(s)	417
BspQI	GCTCTTC	1 cut(s)	180
BspT104I	TTCGAA	2 cut(s)	280, 889
BspTNI	GGTCTC	1 cut(s)	483
BsrFI	RCCGGY	1 cut(s)	1070
BsrI	ACTGG	4 cut(s)	200, 598, 611, 916
BssAI	RCCGGY	1 cut(s)	1070
BssECI	CCNNGG	1 cut(s)	1195
BssMI	GATC	2 cut(s)	409, 1315
BssSI	CACGAG	1 cut(s)	601
Bst2BI	CACGAG	1 cut(s)	601
Bst2UI	CCWGG	1 cut(s)	1323
Bst4CI	ACNGT	7 cut(s)	34, 167, 299, 397, 469, 1189, 1241
Bst6I	CTCTTC	1 cut(s)	180
BstBI	TTCGAA	2 cut(s)	280, 889
BstDEI	CTNAG	5 cut(s)	120, 620, 710, 810, 1000
BstF5I	GGATG	1 cut(s)	670
BstFNI	CGCG	1 cut(s)	326
BstH2I	RGCGCY	2 cut(s)	953, 1066
BstHHI	GCGC	2 cut(s)	952, 1065
BstKTI	GATC	2 cut(s)	412, 1318
BstMAI	GTCTC	4 cut(s)	483, 713, 797, 1003
BstMBI	GATC	2 cut(s)	409, 1315
BstMWI	GCNNNNNNNGC	2 cut(s)	323, 949
BstNI	CCWGG	1 cut(s)	1323
BstNSI	RCATGY	1 cut(s)	1205
BstPAI	GACNNNNGTC	1 cut(s)	737
BstSCI	CCNGG	2 cut(s)	1194, 1321
BstSLI	GKGCMC	1 cut(s)	720
BstUI	CGCG	1 cut(s)	326
BstV1I	GCAGC	1 cut(s)	573
BstV2I	GAAGAC	2 cut(s)	35, 922
BstX2I	RGATCY	2 cut(s)	409, 1315
BstYI	RGATCY	2 cut(s)	409, 1315
BsuI	GTATCC	1 cut(s)	7
BsuRI	GGCC	1 cut(s)	447
BtsCI	GGATG	1 cut(s)	670
BtsIMutI	CAGTG	5 cut(s)	39, 417, 686, 718, 909
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	2 cut(s)	952, 1065
Cfr10I	RCCGGY	1 cut(s)	1070
Cfr13I	GGNCC	3 cut(s)	104, 1208, 1230
Csp6I	GTAC	3 cut(s)	197, 211, 786
CspAI	ACCGGT	1 cut(s)	1070
CspCI	CAANNNNNGTGG	2 cut(s)	437, 472
CviAII	CATG	7 cut(s)	7, 82, 630, 842, 1094, 1202, 1328
CviQI	GTAC	3 cut(s)	197, 211, 786
DdeI	CTNAG	5 cut(s)	120, 620, 710, 810, 1000
DpnI	GATC	2 cut(s)	411, 1317
DpnII	GATC	2 cut(s)	409, 1315
Eam1104I	CTCTTC	1 cut(s)	180
EarI	CTCTTC	1 cut(s)	180
EciI	GGCGGA	1 cut(s)	765
Eco31I	GGTCTC	1 cut(s)	483
Eco47I	GGWCC	3 cut(s)	104, 1208, 1230
Eco47III	AGCGCT	1 cut(s)	1064
EcoRI	GAATTC	1 cut(s)	282
EcoRII	CCWGG	1 cut(s)	1321
FaeI	CATG	7 cut(s)	10, 85, 633, 845, 1097, 1205, 1331
FalI	AAGNNNNNCTT	4 cut(s)	177, 209, 321, 353
FaqI	GGGAC	1 cut(s)	1212
FatI	CATG	7 cut(s)	6, 81, 629, 841, 1093, 1201, 1327
Fnu4HI	GCNGC	1 cut(s)	562
FokI	GGATG	1 cut(s)	677
Fsp4HI	GCNGC	1 cut(s)	562
FspBI	CTAG	3 cut(s)	375, 554, 651
GlaI	GCGC	2 cut(s)	951, 1064
GluI	GCNGC	1 cut(s)	562
HaeII	RGCGCY	2 cut(s)	953, 1066
HaeIII	GGCC	1 cut(s)	447
HapII	CCGG	3 cut(s)	516, 1071, 1195
HhaI	GCGC	2 cut(s)	952, 1065
Hin1II	CATG	7 cut(s)	10, 85, 633, 845, 1097, 1205, 1331
Hin6I	GCGC	2 cut(s)	950, 1063
HinP1I	GCGC	2 cut(s)	950, 1063
HincII	GTYRAC	2 cut(s)	48, 295
HindII	GTYRAC	2 cut(s)	48, 295
HindIII	AAGCTT	1 cut(s)	818
HinfI	GANTC	4 cut(s)	535, 980, 1268, 1357
HpaI	GTTAAC	2 cut(s)	48, 295
HpaII	CCGG	3 cut(s)	516, 1071, 1195
HphI	GGTGA	3 cut(s)	398, 530, 1098
Hpy166II	GTNNAC	4 cut(s)	48, 295, 435, 616
Hpy188I	TCNGA	2 cut(s)	181, 1009
Hpy188III	TCNNGA	5 cut(s)	356, 482, 827, 1279, 1361
Hpy8I	GTNNAC	4 cut(s)	48, 295, 435, 616
Hpy99I	CGWCG	1 cut(s)	639
HpyAV	CCTTC	6 cut(s)	17, 53, 235, 551, 829, 1408
HpyCH4III	ACNGT	7 cut(s)	34, 167, 299, 397, 469, 1189, 1241
HpyCH4IV	ACGT	1 cut(s)	209
HpyCH4V	TGCA	6 cut(s)	112, 441, 668, 1127, 1133, 1331
HpyF10VI	GCNNNNNNNGC	2 cut(s)	323, 949
HpyF3I	CTNAG	5 cut(s)	120, 620, 710, 810, 1000
HpySE526I	ACGT	1 cut(s)	209
Hsp92II	CATG	7 cut(s)	10, 85, 633, 845, 1097, 1205, 1331
HspAI	GCGC	2 cut(s)	950, 1063
KspAI	GTTAAC	2 cut(s)	48, 295
Kzo9I	GATC	2 cut(s)	409, 1315
LguI	GCTCTTC	1 cut(s)	180
LmnI	GCTCC	1 cut(s)	896
Lsp1109I	GCAGC	1 cut(s)	573
LweI	GCATC	3 cut(s)	502, 655, 1142
MaeI	CTAG	3 cut(s)	375, 554, 651
MaeII	ACGT	1 cut(s)	209
MaeIII	GTNAC	6 cut(s)	156, 320, 575, 643, 730, 1183
MalI	GATC	2 cut(s)	411, 1317
MboI	GATC	2 cut(s)	409, 1315
MboII	GAAGA	6 cut(s)	40, 197, 878, 927, 947, 1310
MfeI	CAATTG	1 cut(s)	312
MflI	RGATCY	2 cut(s)	409, 1315
MhlI	GDGCHC	2 cut(s)	720, 875
MluCI	AATT	8 cut(s)	282, 312, 368, 454, 759, 830, 1178, 1290
MlyI	GAGTC	2 cut(s)	1262, 1366
MmeI	TCCRAC	3 cut(s)	184, 512, 1186
MnlI	CCTC	4 cut(s)	102, 142, 936, 1330
MroXI	GAANNNNTTC	3 cut(s)	189, 333, 882
MseI	TTAA	7 cut(s)	47, 294, 792, 855, 1067, 1307, 1420
MslI	CAYNNNNRTG	1 cut(s)	1332
MspI	CCGG	3 cut(s)	516, 1071, 1195
MspR9I	CCNGG	2 cut(s)	1196, 1323
MunI	CAATTG	1 cut(s)	312
MvaI	CCWGG	1 cut(s)	1323
MvnI	CGCG	1 cut(s)	326
MwoI	GCNNNNNNNGC	2 cut(s)	323, 949
NciI	CCSGG	1 cut(s)	1196
NdeII	GATC	2 cut(s)	409, 1315
NlaIII	CATG	7 cut(s)	10, 85, 633, 845, 1097, 1205, 1331
NlaIV	GGNNCC	3 cut(s)	137, 609, 1035
NmuCI	GTSAC	4 cut(s)	320, 575, 643, 730
NspI	RCATGY	1 cut(s)	1205
NspV	TTCGAA	2 cut(s)	280, 889
PciI	ACATGT	1 cut(s)	1201
PciSI	GCTCTTC	1 cut(s)	180
PdmI	GAANNNNTTC	3 cut(s)	189, 333, 882
PfeI	GAWTC	2 cut(s)	535, 980
PinAI	ACCGGT	1 cut(s)	1070
PkrI	GCNGC	1 cut(s)	563
PleI	GAGTC	2 cut(s)	1262, 1365
PpsI	GAGTC	2 cut(s)	1262, 1365
PscI	ACATGT	1 cut(s)	1201
PshAI	GACNNNNGTC	1 cut(s)	737
Psp6I	CCWGG	1 cut(s)	1321
PspGI	CCWGG	1 cut(s)	1321
PspN4I	GGNNCC	3 cut(s)	137, 609, 1035
PspPI	GGNCC	3 cut(s)	104, 1208, 1230
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	2 cut(s)	409, 1315
RsaI	GTAC	3 cut(s)	198, 212, 787
RsaNI	GTAC	3 cut(s)	197, 211, 786
RseI	CAYNNNNRTG	1 cut(s)	1332
SapI	GCTCTTC	1 cut(s)	180
SaqAI	TTAA	7 cut(s)	47, 294, 792, 855, 1067, 1307, 1420
SatI	GCNGC	1 cut(s)	562
Sau3AI	GATC	2 cut(s)	409, 1315
Sau96I	GGNCC	3 cut(s)	104, 1208, 1230
SchI	GAGTC	2 cut(s)	1262, 1366
ScrFI	CCNGG	2 cut(s)	1196, 1323
SduI	GDGCHC	2 cut(s)	720, 875
SfaNI	GCATC	3 cut(s)	502, 655, 1142
SfuI	TTCGAA	2 cut(s)	280, 889
SinI	GGWCC	3 cut(s)	104, 1208, 1230
SmiMI	CAYNNNNRTG	1 cut(s)	1332
SmlI	CTYRAG	1 cut(s)	1277
SmoI	CTYRAG	1 cut(s)	1277
Sse9I	AATT	8 cut(s)	282, 312, 368, 454, 759, 830, 1178, 1290
SsiI	CCGC	4 cut(s)	326, 750, 1233, 1346
SspMI	CTAG	3 cut(s)	375, 554, 651
StyD4I	CCNGG	2 cut(s)	1194, 1321
TaaI	ACNGT	7 cut(s)	34, 167, 299, 397, 469, 1189, 1241
TaiI	ACGT	1 cut(s)	212
TaqI	TCGA	5 cut(s)	280, 637, 889, 954, 1140
TasI	AATT	8 cut(s)	282, 312, 368, 454, 759, 830, 1178, 1290
TfiI	GAWTC	2 cut(s)	535, 980
Tru1I	TTAA	7 cut(s)	47, 294, 792, 855, 1067, 1307, 1420
Tru9I	TTAA	7 cut(s)	47, 294, 792, 855, 1067, 1307, 1420
TscAI	CASTG	5 cut(s)	39, 424, 693, 718, 916
TseFI	GTSAC	4 cut(s)	320, 575, 643, 730
TseI	GCWGC	1 cut(s)	561
Tsp45I	GTSAC	4 cut(s)	320, 575, 643, 730
TspDTI	ATGAA	1 cut(s)	948
TspRI	CASTG	5 cut(s)	39, 424, 693, 718, 916
VpaK11BI	GGWCC	3 cut(s)	104, 1208, 1230
XapI	RAATTY	1 cut(s)	282
XceI	RCATGY	1 cut(s)	1205
XmnI	GAANNNNTTC	3 cut(s)	189, 333, 882
XspI	CTAG	3 cut(s)	375, 554, 651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.