pycom17g27070

Notchless protein homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
25341031 .. 25347335
6305 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g27070.8

Sequence Viewer

Length: 1428 bp
ATGGCTATGGAGGTGGAAGAAACAGAGGGGAAGACTGTGTTATGCCTGCTGACGGACCCAGATGGGACTCCATTAGGAAGCTCCGTCTACCTTCCTCAGAACACTGAGCCGCAACACCTTCAGCAAATTGTCAACCAGCTTCTCAAAAATGAGGAGAGGCTACCTTATGCTTTCTATATACAAGATCAGGAACTTATTGAGTCACTTGGAAAATATGCAGACAAGAAGAAAATTTCCGTGGAGAAGGTACTCAACATAGTTTATCAACCACAAGCTGTTTTCCGAATTCGTCCTGTTCATCGTTGCTCAGCAACAATTGCCGGTCACACAGAAGCTGTACTTTCAGTTGCTTTTAGTCCTGATGGTCAACAGTTGGCTAGTGGTTCTGGTGATACAACTGTCCGACTATGGGACCTTAATACTCAGACGCCGTTGCACACATGTACAGGACATAAGAATTGGGTCCTTTCCATTGCATGGTCACCTGATGGTAAGCATCTTGTTAGTGGCAGCAAGTCTGGAGAACTTCAATGTTGGGATCCACAGACAGGGAATCCATCAGGCAATCCACTTATTGGCCACAAGAAATGGATTACTGGAATCTCTTGGGAACCAGTCCACTTTAGCTCTCCATGTCGACGCTTTGTAAGTGCTAGCAAAGATGGTGATGCACGCATATGGGATGTTACGTTGAGGAAATCTGTTATATGTCTTAGTGGCCACACACTTGCCGTAACTTGTGTAAAATGGGGTGGAGATGGTGTCATATATACAGGCTCCCAGGATTGTACTATCAAAGTATGGGAGACCACTCAAGGAAAACTAATTCGTGAACTGAAGGGTCATGGTCATTGGGTTAACTCTCTTACATTGAGTACTGAATATGTTCTTCGTACTGGAGCCTTTGATCACACCTGCAAGCAGTATTCGTCTCCAGAGGAAATGAAGAAGGCAGCTTTGGAAAGATATAACAAAATGAAAGGCAATGCCCCTGAAAGATTGGTTTCTGGATCCGATGATTTTACAATGTTTCTATGGGAACCTTTTGTCAGCAAACAACCTAAAACTCGCATGACAGGTCATCAACAGCTTGTAAACCACGTCTGCTTTTCACCTGATGGGCAATGGATAGCAAGTGCCTCATTTGATAGGTCTGTCAAGTTATGGAACGGTACTACTGGAAAATTTGTTACAGCTTTCCGGGGCCATGTTGGCCCTGTCTACCAGATCAGCTGGTCGGCAGACAGTAGGCTGCTTGTAAGTGGCAGCAAAGATTCCACTCTCAAGGTTTGGGATATCAGAGCACGGGCGCTAAAACAAGACCTTCCAGGCCATGCTGATGAGGTTTTTGCTGTCGATTGGAGTCCAGATGGTGGGAAGGTTGCTTCGGGTGGCAAGGATAGAGTTCTGAAGCTATGGATGGGCTAG

Protein Analysis

476

Amino Acids

52.72

Weight (kDa)

8.41

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011105)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 923
AccB7I CCANNNNNTGG 3 cut(s) 477, 575, 1373
AccI GTMKAC 3 cut(s) 87, 637, 1221
AciI CCGC 1 cut(s) 110
AclWI GGATC 4 cut(s) 533, 546, 1005, 1018
AcoI YGGCCR 2 cut(s) 577, 718
AcsI RAATTY 3 cut(s) 231, 285, 1184
AcuI CTGAAG 2 cut(s) 104, 857
AcyI GRCGYC 1 cut(s) 428
AfaI GTAC 7 cut(s) 249, 339, 445, 790, 877, 895, 1174
AfiI CCNNNNNNNGG 6 cut(s) 52, 409, 477, 548, 575, 1373
AflIII ACRYGT 1 cut(s) 440
AgsI TTSAA 1 cut(s) 530
AjiI CACGTC 1 cut(s) 1102
AjnI CCWGG 2 cut(s) 780, 1327
AjuI GAANNNNNNNTTGG 2 cut(s) 941, 973
Alw21I GWGCWC 1 cut(s) 1306
Alw26I GTCTC 2 cut(s) 800, 936
AlwI GGATC 4 cut(s) 533, 546, 1005, 1018
AlwNI CAGNNNCTG 1 cut(s) 335
AoxI GGCC 5 cut(s) 577, 718, 1204, 1213, 1330
ApeKI GCWGC 4 cut(s) 510, 953, 1252, 1266
ApoI RAATTY 3 cut(s) 231, 285, 1184
Asp700I GAANNNNTTC 1 cut(s) 885
AspLEI GCGC 1 cut(s) 1312
AspS9I GGNCC 5 cut(s) 55, 412, 463, 1204, 1214
AsuC2I CCSGG 1 cut(s) 1202
AsuHPI GGTGA 4 cut(s) 401, 474, 677, 1104
AsuNHI GCTAGC 1 cut(s) 653
AvaII GGWCC 3 cut(s) 55, 412, 463
BaeI ACNNNNGTAYC 2 cut(s) 384, 417
BalI TGGCCA 2 cut(s) 579, 720
BamHI GGATCC 2 cut(s) 538, 1010
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 1306
BbvI GCAGC 4 cut(s) 522, 965, 1239, 1278
BccI CCATC 9 cut(s) 56, 356, 482, 565, 656, 752, 1112, 1364, 1414
BceAI ACGGC 2 cut(s) 415, 716
BciT130I CCWGG 2 cut(s) 782, 1329
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 1 cut(s) 1202
BcoDI GTCTC 2 cut(s) 800, 936
BfaI CTAG 3 cut(s) 378, 654, 1426
BfoI RGCGCY 1 cut(s) 1313
BfuAI ACCTGC 1 cut(s) 923
BglI GCCNNNNNGGC 1 cut(s) 1212
BisI GCNGC 5 cut(s) 110, 511, 954, 1253, 1267
BlpI GCTNAGC 1 cut(s) 307
BlsI GCNGC 5 cut(s) 111, 512, 955, 1254, 1268
BmcAI AGTACT 1 cut(s) 877
Bme1390I CCNGG 3 cut(s) 782, 1202, 1329
Bme18I GGWCC 3 cut(s) 55, 412, 463
BmgBI CACGTC 1 cut(s) 1102
BmgT120I GGNCC 5 cut(s) 55, 412, 463, 1204, 1214
BmrFI CCNGG 3 cut(s) 782, 1202, 1329
BmsI GCATC 2 cut(s) 505, 658
BmtI GCTAGC 1 cut(s) 657
BpiI GAAGAC 1 cut(s) 38
BpmI CTGGAG 3 cut(s) 540, 918, 918
Bpu1102I GCTNAGC 1 cut(s) 307
BpuEI CTTGAG 2 cut(s) 798, 1268
BpuMI CCSGG 1 cut(s) 1202
BsaHI GRCGYC 1 cut(s) 428
BsaI GGTCTC 1 cut(s) 800
BsaJI CCNNGG 3 cut(s) 237, 780, 1201
BsaXI ACNNNNNCTCC 2 cut(s) 747, 777
Bsc4I CCNNNNNNNGG 6 cut(s) 52, 409, 477, 548, 575, 1373
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 4 cut(s) 601, 614, 901, 1183
Bse3DI GCAATG 3 cut(s) 471, 991, 1130
BseBI CCWGG 2 cut(s) 782, 1329
BseDI CCNNGG 3 cut(s) 237, 780, 1201
BseGI GGATG 2 cut(s) 688, 1425
BseLI CCNNNNNNNGG 6 cut(s) 52, 409, 477, 548, 575, 1373
BseMI GCAATG 3 cut(s) 471, 991, 1130
BseMII CTCAG 4 cut(s) 96, 110, 321, 437
BseNI ACTGG 4 cut(s) 601, 614, 901, 1183
BseRI GAGGAG 1 cut(s) 167
BseXI GCAGC 4 cut(s) 522, 965, 1239, 1278
BshFI GGCC 5 cut(s) 579, 720, 1206, 1215, 1332
BsiHKAI GWGCWC 1 cut(s) 1306
BsiSI CCGG 2 cut(s) 321, 1201
BslFI GGGAC 2 cut(s) 79, 425
BslI CCNNNNNNNGG 6 cut(s) 52, 409, 477, 548, 575, 1373
BsmAI GTCTC 2 cut(s) 800, 936
BsmBI CGTCTC 1 cut(s) 936
BsmFI GGGAC 2 cut(s) 79, 425
BsnI GGCC 5 cut(s) 579, 720, 1206, 1215, 1332
Bso31I GGTCTC 1 cut(s) 800
Bsp1286I GDGCHC 1 cut(s) 1306
Bsp1407I TGTACA 1 cut(s) 443
Bsp143I GATC 5 cut(s) 184, 538, 907, 1010, 1227
Bsp1720I GCTNAGC 1 cut(s) 307
BspACI CCGC 1 cut(s) 110
BspANI GGCC 5 cut(s) 579, 720, 1206, 1215, 1332
BspCNI CTCAG 4 cut(s) 97, 109, 320, 436
BspMI ACCTGC 1 cut(s) 923
BspOI GCTAGC 1 cut(s) 657
BspPI GGATC 4 cut(s) 533, 546, 1005, 1018
BspTNI GGTCTC 1 cut(s) 800
BsrDI GCAATG 3 cut(s) 471, 991, 1130
BsrFI RCCGGY 1 cut(s) 320
BsrGI TGTACA 1 cut(s) 443
BsrI ACTGG 4 cut(s) 601, 614, 901, 1183
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 3 cut(s) 237, 780, 1201
BssMI GATC 5 cut(s) 184, 538, 907, 1010, 1227
BssNI GRCGYC 1 cut(s) 428
Bst2UI CCWGG 2 cut(s) 782, 1329
Bst4CI ACNGT 5 cut(s) 37, 372, 400, 1172, 1247
BstACI GRCGYC 1 cut(s) 428
BstAPI GCANNNNNTGC 1 cut(s) 317
BstAUI TGTACA 1 cut(s) 443
BstC8I GCNNGC 4 cut(s) 47, 655, 673, 920
BstDEI CTNAG 5 cut(s) 96, 105, 307, 423, 713
BstDSI CCRYGG 1 cut(s) 237
BstEII GGTNACC 1 cut(s) 480
BstF5I GGATG 2 cut(s) 688, 1425
BstH2I RGCGCY 1 cut(s) 1313
BstHHI GCGC 1 cut(s) 1312
BstKTI GATC 5 cut(s) 187, 541, 910, 1013, 1230
BstMAI GTCTC 2 cut(s) 800, 936
BstMBI GATC 5 cut(s) 184, 538, 907, 1010, 1227
BstMWI GCNNNNNNNGC 2 cut(s) 317, 1212
BstNI CCWGG 2 cut(s) 782, 1329
BstNSI RCATGY 1 cut(s) 444
BstPI GGTNACC 1 cut(s) 480
BstSCI CCNGG 3 cut(s) 780, 1200, 1327
BstV1I GCAGC 4 cut(s) 522, 965, 1239, 1278
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 2 cut(s) 538, 1010
BstYI RGATCY 2 cut(s) 538, 1010
BsuRI GGCC 5 cut(s) 579, 720, 1206, 1215, 1332
BtgI CCRYGG 1 cut(s) 237
BtrI CACGTC 1 cut(s) 1102
BtsCI GGATG 2 cut(s) 688, 1425
BtsIMutI CAGTG 1 cut(s) 102
BveI ACCTGC 1 cut(s) 923
Cac8I GCNNGC 4 cut(s) 47, 655, 673, 920
CaiI CAGNNNCTG 1 cut(s) 335
CfoI GCGC 1 cut(s) 1312
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 5 cut(s) 55, 412, 463, 1204, 1214
CseI GACGC 2 cut(s) 436, 648
Csp6I GTAC 7 cut(s) 248, 338, 444, 789, 876, 894, 1173
CviAII CATG 7 cut(s) 441, 477, 633, 845, 1072, 1208, 1334
CviQI GTAC 7 cut(s) 248, 338, 444, 789, 876, 894, 1173
DdeI CTNAG 5 cut(s) 96, 105, 307, 423, 713
DpnI GATC 5 cut(s) 186, 540, 909, 1012, 1229
DpnII GATC 5 cut(s) 184, 538, 907, 1010, 1227
EaeI YGGCCR 2 cut(s) 577, 718
Eco31I GGTCTC 1 cut(s) 800
Eco32I GATATC 1 cut(s) 1297
Eco47I GGWCC 3 cut(s) 55, 412, 463
Eco57I CTGAAG 2 cut(s) 104, 857
Eco91I GGTNACC 1 cut(s) 480
EcoO109I RGGNCCY 2 cut(s) 412, 463
EcoO65I GGTNACC 1 cut(s) 480
EcoRI GAATTC 1 cut(s) 285
EcoRII CCWGG 2 cut(s) 780, 1327
EcoRV GATATC 1 cut(s) 1297
Esp3I CGTCTC 1 cut(s) 936
FaeI CATG 7 cut(s) 444, 480, 636, 848, 1075, 1211, 1337
FalI AAGNNNNNCTT 2 cut(s) 324, 356
FaqI GGGAC 2 cut(s) 79, 425
FatI CATG 7 cut(s) 440, 476, 632, 844, 1071, 1207, 1333
FauNDI CATATG 1 cut(s) 677
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 3 cut(s) 87, 637, 1221
Fnu4HI GCNGC 5 cut(s) 110, 511, 954, 1253, 1267
FokI GGATG 1 cut(s) 695
Fsp4HI GCNGC 5 cut(s) 110, 511, 954, 1253, 1267
FspBI CTAG 3 cut(s) 378, 654, 1426
GlaI GCGC 1 cut(s) 1311
GluI GCNGC 5 cut(s) 110, 511, 954, 1253, 1267
GsuI CTGGAG 3 cut(s) 540, 918, 918
HaeII RGCGCY 1 cut(s) 1313
HaeIII GGCC 5 cut(s) 579, 720, 1206, 1215, 1332
HapII CCGG 2 cut(s) 321, 1201
HgaI GACGC 2 cut(s) 436, 648
HhaI GCGC 1 cut(s) 1312
Hin1I GRCGYC 1 cut(s) 428
Hin1II CATG 7 cut(s) 444, 480, 636, 848, 1075, 1211, 1337
Hin6I GCGC 1 cut(s) 1310
HinP1I GCGC 1 cut(s) 1310
HincII GTYRAC 4 cut(s) 133, 368, 638, 859
HindII GTYRAC 4 cut(s) 133, 368, 638, 859
HinfI GANTC 6 cut(s) 67, 200, 553, 600, 1274, 1363
HpaI GTTAAC 1 cut(s) 859
HpaII CCGG 2 cut(s) 321, 1201
HphI GGTGA 4 cut(s) 401, 474, 677, 1104
Hpy166II GTNNAC 9 cut(s) 88, 133, 368, 619, 638, 833, 859, 1096, 1222
Hpy188I TCNGA 7 cut(s) 99, 284, 404, 426, 1015, 1301, 1410
Hpy188III TCNNGA 7 cut(s) 188, 359, 519, 830, 935, 1008, 1367
Hpy8I GTNNAC 9 cut(s) 88, 133, 368, 619, 638, 833, 859, 1096, 1222
Hpy99I CGWCG 1 cut(s) 642
HpyAV CCTTC 7 cut(s) 101, 128, 238, 832, 943, 1334, 1372
HpyCH4III ACNGT 5 cut(s) 37, 372, 400, 1172, 1247
HpyCH4IV ACGT 2 cut(s) 689, 1101
HpyCH4V TGCA 5 cut(s) 218, 436, 476, 671, 918
HpyF10VI GCNNNNNNNGC 2 cut(s) 317, 1212
HpyF3I CTNAG 5 cut(s) 96, 105, 307, 423, 713
HpySE526I ACGT 2 cut(s) 689, 1101
Hsp92I GRCGYC 1 cut(s) 428
Hsp92II CATG 7 cut(s) 444, 480, 636, 848, 1075, 1211, 1337
HspAI GCGC 1 cut(s) 1310
Ksp22I TGATCA 1 cut(s) 907
KspAI GTTAAC 1 cut(s) 859
Kzo9I GATC 5 cut(s) 184, 538, 907, 1010, 1227
LmnI GCTCC 3 cut(s) 86, 782, 899
Lsp1109I GCAGC 4 cut(s) 522, 965, 1239, 1278
LweI GCATC 2 cut(s) 505, 658
MaeI CTAG 3 cut(s) 378, 654, 1426
MaeII ACGT 2 cut(s) 689, 1101
MaeIII GTNAC 6 cut(s) 201, 323, 480, 685, 733, 1189
MalI GATC 5 cut(s) 186, 540, 909, 1012, 1229
MboI GATC 5 cut(s) 184, 538, 907, 1010, 1227
MboII GAAGA 5 cut(s) 29, 43, 238, 881, 958
MfeI CAATTG 1 cut(s) 315
MflI RGATCY 2 cut(s) 538, 1010
MhlI GDGCHC 1 cut(s) 1306
MlsI TGGCCA 2 cut(s) 579, 720
MluCI AATT 7 cut(s) 126, 231, 285, 315, 457, 825, 1184
MluNI TGGCCA 2 cut(s) 579, 720
MlyI GAGTC 3 cut(s) 61, 209, 1372
MmeI TCCRAC 1 cut(s) 427
MnlI CCTC 9 cut(s) 4, 19, 105, 145, 150, 687, 931, 1150, 1336
Mox20I TGGCCA 2 cut(s) 579, 720
MroXI GAANNNNTTC 1 cut(s) 885
MscI TGGCCA 2 cut(s) 579, 720
MseI TTAA 2 cut(s) 417, 858
MslI CAYNNNNRTG 2 cut(s) 676, 1338
Msp20I TGGCCA 2 cut(s) 579, 720
MspA1I CMGCKG 1 cut(s) 1233
MspI CCGG 2 cut(s) 321, 1201
MspR9I CCNGG 3 cut(s) 782, 1202, 1329
MunI CAATTG 1 cut(s) 315
MvaI CCWGG 2 cut(s) 782, 1329
MwoI GCNNNNNNNGC 2 cut(s) 317, 1212
NciI CCSGG 1 cut(s) 1202
NdeI CATATG 1 cut(s) 677
NdeII GATC 5 cut(s) 184, 538, 907, 1010, 1227
NheI GCTAGC 1 cut(s) 653
NlaIII CATG 7 cut(s) 444, 480, 636, 848, 1075, 1211, 1337
NmuCI GTSAC 3 cut(s) 201, 323, 480
NspI RCATGY 1 cut(s) 444
PaqCI CACCTGC 1 cut(s) 923
PciI ACATGT 1 cut(s) 440
PdmI GAANNNNTTC 1 cut(s) 885
PfeI GAWTC 3 cut(s) 553, 600, 1274
PflMI CCANNNNNTGG 3 cut(s) 477, 575, 1373
PkrI GCNGC 5 cut(s) 111, 512, 955, 1254, 1268
PleI GAGTC 3 cut(s) 61, 208, 1371
PpsI GAGTC 3 cut(s) 61, 208, 1371
PpuMI RGGWCCY 2 cut(s) 412, 463
PscI ACATGT 1 cut(s) 440
Psp5II RGGWCCY 2 cut(s) 412, 463
Psp6I CCWGG 2 cut(s) 780, 1327
PspEI GGTNACC 1 cut(s) 480
PspGI CCWGG 2 cut(s) 780, 1327
PspPI GGNCC 5 cut(s) 55, 412, 463, 1204, 1214
PspPPI RGGWCCY 2 cut(s) 412, 463
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 2 cut(s) 538, 1010
PvuII CAGCTG 1 cut(s) 1233
RsaI GTAC 7 cut(s) 249, 339, 445, 790, 877, 895, 1174
RsaNI GTAC 7 cut(s) 248, 338, 444, 789, 876, 894, 1173
RseI CAYNNNNRTG 2 cut(s) 676, 1338
SalI GTCGAC 1 cut(s) 636
SaqAI TTAA 2 cut(s) 417, 858
SatI GCNGC 5 cut(s) 110, 511, 954, 1253, 1267
Sau3AI GATC 5 cut(s) 184, 538, 907, 1010, 1227
Sau96I GGNCC 5 cut(s) 55, 412, 463, 1204, 1214
ScaI AGTACT 1 cut(s) 877
SchI GAGTC 3 cut(s) 61, 209, 1372
ScrFI CCNGG 3 cut(s) 782, 1202, 1329
SduI GDGCHC 1 cut(s) 1306
SfaNI GCATC 2 cut(s) 505, 658
SfiI GGCCNNNNNGGCC 1 cut(s) 1212
SinI GGWCC 3 cut(s) 55, 412, 463
SmiMI CAYNNNNRTG 2 cut(s) 676, 1338
SmlI CTYRAG 2 cut(s) 813, 1283
SmoI CTYRAG 2 cut(s) 813, 1283
Sse9I AATT 7 cut(s) 126, 231, 285, 315, 457, 825, 1184
SsiI CCGC 1 cut(s) 110
SspMI CTAG 3 cut(s) 378, 654, 1426
StyD4I CCNGG 3 cut(s) 780, 1200, 1327
TaaI ACNGT 5 cut(s) 37, 372, 400, 1172, 1247
TaiI ACGT 2 cut(s) 692, 1104
TaqI TCGA 2 cut(s) 637, 1356
TasI AATT 7 cut(s) 126, 231, 285, 315, 457, 825, 1184
TatI WGTACW 4 cut(s) 337, 443, 788, 875
TauI GCSGC 1 cut(s) 112
TfiI GAWTC 3 cut(s) 553, 600, 1274
Tru1I TTAA 2 cut(s) 417, 858
Tru9I TTAA 2 cut(s) 417, 858
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 3 cut(s) 201, 323, 480
TseI GCWGC 4 cut(s) 510, 953, 1252, 1266
Tsp45I GTSAC 3 cut(s) 201, 323, 480
TspDTI ATGAA 3 cut(s) 287, 959, 992
TspGWI ACGGA 3 cut(s) 68, 73, 226
TspRI CASTG 1 cut(s) 109
Van91I CCANNNNNTGG 3 cut(s) 477, 575, 1373
VpaK11BI GGWCC 3 cut(s) 55, 412, 463
XapI RAATTY 3 cut(s) 231, 285, 1184
XceI RCATGY 1 cut(s) 444
XmiI GTMKAC 3 cut(s) 87, 637, 1221
XmnI GAANNNNTTC 1 cut(s) 885
XspI CTAG 3 cut(s) 378, 654, 1426
ZrmI AGTACT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.