Prupe.2G020500_v2.0.a1

Notchless protein homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
2041522 .. 2050112
8591 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G020500.1

Sequence Viewer

Length: 1425 bp
ATGACCATGGAGGTGGAACCAGAGGGGAAGAATGTGATGTGCCTTCTGACGGACCCAGAAGGGACGCCATTGGGAAATTCCGTGTACCTTCCCCAAAACACCGGCCCGCAACACCTTCAACAAATCGTCAATCAGCTTCTCAACAACGAGGACAAGCTGCCTTATGCTTTCTATATATCAGATCAGGAACTTCTTGAGTCACTTGGAAAATATTCGGAGAAGAATAAAATTTCTGTTGAGAAGGTACTGAAAATAGTTTATCAACCACAAGCTATTTTCCGAATTCGTCCTGTTCATCGGTGCTCGGCAACAATTGCTGGTCACAATGAAGCTGTACTTTCAGTTGCTTTTAGTCCTGATGGCCGACAGTTGGCAAGTGGTTCTGGTGATACCACTGTCCGACTATGGGACCTTGGTACTCAGACACCGTTGTACACATGTACAGGACATAAGAATTGGGTCCTTTGCATTGCATGGTCACCTGATGGTAAACATCTTGTTAGTGGGAGTAAAGCCGGGGAACTCCAATGTTGGGATCCACAGACTGGGAAGCCATCAGGCAATCCGCTTATAGGCCATAAGAAATGGATTACTGGAATCTCTTGGGAACCAGTCCACCTGAACTCTCCCTGTCGACGCTTTGTAAGTGCTAGCAAAGATGGTGATGCACGCATATGGGATGTTACATTGAGGAAATCTGTTATATGTCTTAGTGGCCACACACTTGCAGTGACGTGTGTAAAATGGGGGGGAGATGGTGTTATATATACAGGGTCCCAGGATTGTACTATCAAAGTCTGGGAGACTACACAGGGGAAGCTAATTCGTGAACTTAAGGGTCATGGTCATTGGGTTAACTCTCTTGCATTGAGTACTGAATATGTTCTTCGTACTGGAGCCTTTGATCACACCTGCAAGCAATATTCATCTCCAGAGGAAATGAAGAAAGTAGCCTTGGAAAGGTATAACAAAATGAAAGGCAATGCCCCTGAAAGATTGGTTTCTGGATCTGATGATTTTACAATGTTTCTATGGGAACCTTTTGTCAGCAAACACCCGAAAACTCGCATGACAGGTCATCAACAGCTTGTAAACCACGTTTACTTTTCACCTGATGGGCAATGGATAGCAAGTGCCTCATTTGATAGGTCTGTCAAGTTATGGAATGGTACTACAGGAAAATTTGTTGCAGCTTTCCGGGGCCATGTTGGCCCTGTCTACCAGATCAGCTGGTCGGCAGACAGCAGGCTACTTTTAAGTGGCAGCAAAGATTCCACTCTGAAGGTTTGGGATATCAGGACACGGAAATTAAAACAAGACCTTCCAGGACATGCAGATGAGGTTTATGCTGTTGATTGGAGTCCAGATGGTGAGAAGGTAGTTTCTGGTGGCAAGGATAGAGTTTTGAAGTTATGGATGGGCTAG

Protein Analysis

475

Amino Acids

52.84

Weight (kDa)

8.74

Isoelectric Point (pI)

31.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011105)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 920
Acc36I ACCTGC 1 cut(s) 920
AccB7I CCANNNNNTGG 1 cut(s) 545
AccI GTMKAC 2 cut(s) 634, 1218
AciI CCGC 2 cut(s) 107, 566
AclWI GGATC 3 cut(s) 530, 543, 1015
AcoI YGGCCR 2 cut(s) 361, 715
AcsI RAATTY 4 cut(s) 76, 228, 282, 1181
AcuI CTGAAG 1 cut(s) 1301
AcyI GRCGYC 1 cut(s) 65
AfiI CCNNNNNNNGG 7 cut(s) 49, 370, 406, 532, 545, 572, 960
AflII CTTAAG 1 cut(s) 833
AflIII ACRYGT 2 cut(s) 437, 734
AgsI TTSAA 2 cut(s) 119, 1408
AjiI CACGTC 1 cut(s) 735
AjnI CCWGG 2 cut(s) 777, 1324
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
AluBI AGCT 8 cut(s) 136, 157, 272, 332, 820, 1087, 1193, 1230
AluI AGCT 8 cut(s) 136, 157, 272, 332, 820, 1087, 1193, 1230
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 3 cut(s) 530, 543, 1015
AoxI GGCC 6 cut(s) 103, 361, 574, 715, 1201, 1210
ApeKI GCWGC 3 cut(s) 157, 1190, 1263
ApoI RAATTY 4 cut(s) 76, 228, 282, 1181
Asp700I GAANNNNTTC 2 cut(s) 211, 882
AspS9I GGNCC 7 cut(s) 52, 104, 409, 460, 774, 1201, 1211
AsuC2I CCSGG 2 cut(s) 517, 1199
AsuHPI GGTGA 5 cut(s) 398, 471, 674, 1101, 1382
AsuNHI GCTAGC 1 cut(s) 650
AvaII GGWCC 4 cut(s) 52, 409, 460, 774
BaeI ACNNNNGTAYC 2 cut(s) 381, 414
BalI TGGCCA 1 cut(s) 717
BamHI GGATCC 1 cut(s) 535
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 3 cut(s) 144, 1202, 1275
BccI CCATC 8 cut(s) 353, 479, 562, 653, 749, 1109, 1361, 1411
BciT130I CCWGG 2 cut(s) 779, 1326
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 2 cut(s) 517, 1199
BcoDI GTCTC 1 cut(s) 797
BfaI CTAG 2 cut(s) 651, 1423
BfmI CTRYAG 1 cut(s) 1173
BfrI CTTAAG 1 cut(s) 833
BfuAI ACCTGC 1 cut(s) 920
BglI GCCNNNNNGGC 1 cut(s) 1209
BisI GCNGC 3 cut(s) 158, 1191, 1264
BlsI GCNGC 3 cut(s) 159, 1192, 1265
BmcAI AGTACT 1 cut(s) 874
Bme1390I CCNGG 4 cut(s) 517, 779, 1199, 1326
Bme18I GGWCC 4 cut(s) 52, 409, 460, 774
BmgBI CACGTC 1 cut(s) 735
BmgT120I GGNCC 7 cut(s) 52, 104, 409, 460, 774, 1201, 1211
BmrFI CCNGG 4 cut(s) 517, 779, 1199, 1326
BmrI ACTGGG 1 cut(s) 555
BmsI GCATC 1 cut(s) 655
BmtI GCTAGC 1 cut(s) 654
BmuI ACTGGG 1 cut(s) 555
BpmI CTGGAG 2 cut(s) 915, 915
BpuEI CTTGAG 1 cut(s) 215
BpuMI CCSGG 2 cut(s) 517, 1199
BsaHI GRCGYC 1 cut(s) 65
BsaJI CCNNGG 6 cut(s) 6, 412, 516, 777, 954, 1198
BsaXI ACNNNNNCTCC 2 cut(s) 744, 774
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 370, 406, 532, 545, 572, 960
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 4 cut(s) 550, 598, 611, 898
Bse3DI GCAATG 3 cut(s) 468, 988, 1127
BseBI CCWGG 2 cut(s) 779, 1326
BseDI CCNNGG 6 cut(s) 6, 412, 516, 777, 954, 1198
BseGI GGATG 2 cut(s) 685, 1422
BseLI CCNNNNNNNGG 7 cut(s) 49, 370, 406, 532, 545, 572, 960
BseMI GCAATG 3 cut(s) 468, 988, 1127
BseMII CTCAG 1 cut(s) 434
BseNI ACTGG 4 cut(s) 550, 598, 611, 898
BseXI GCAGC 3 cut(s) 144, 1202, 1275
BshFI GGCC 6 cut(s) 105, 363, 576, 717, 1203, 1212
BsiHKAI GWGCWC 1 cut(s) 305
BsiSI CCGG 3 cut(s) 102, 516, 1198
BslFI GGGAC 3 cut(s) 76, 422, 760
BslI CCNNNNNNNGG 7 cut(s) 49, 370, 406, 532, 545, 572, 960
BsmAI GTCTC 1 cut(s) 797
BsmFI GGGAC 3 cut(s) 76, 422, 760
BsnI GGCC 6 cut(s) 105, 363, 576, 717, 1203, 1212
Bsp1286I GDGCHC 1 cut(s) 305
Bsp1407I TGTACA 2 cut(s) 432, 440
Bsp143I GATC 5 cut(s) 181, 535, 904, 1007, 1224
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 2 cut(s) 107, 566
BspANI GGCC 6 cut(s) 105, 363, 576, 717, 1203, 1212
BspCNI CTCAG 1 cut(s) 433
BspMI ACCTGC 1 cut(s) 920
BspOI GCTAGC 1 cut(s) 654
BspPI GGATC 3 cut(s) 530, 543, 1015
BspTI CTTAAG 1 cut(s) 833
BsrDI GCAATG 3 cut(s) 468, 988, 1127
BsrFI RCCGGY 1 cut(s) 101
BsrGI TGTACA 2 cut(s) 432, 440
BsrI ACTGG 4 cut(s) 550, 598, 611, 898
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 6 cut(s) 6, 412, 516, 777, 954, 1198
BssMI GATC 5 cut(s) 181, 535, 904, 1007, 1224
BssNI GRCGYC 1 cut(s) 65
BssT1I CCWWGG 3 cut(s) 6, 412, 954
Bst2UI CCWGG 2 cut(s) 779, 1326
Bst4CI ACNGT 3 cut(s) 369, 397, 429
BstACI GRCGYC 1 cut(s) 65
BstAFI CTTAAG 1 cut(s) 833
BstAPI GCANNNNNTGC 1 cut(s) 314
BstAUI TGTACA 2 cut(s) 432, 440
BstC8I GCNNGC 5 cut(s) 107, 652, 670, 917, 1247
BstDEI CTNAG 2 cut(s) 420, 710
BstDSI CCRYGG 1 cut(s) 6
BstEII GGTNACC 1 cut(s) 477
BstENI CCTNNNNNAGG 1 cut(s) 958
BstF5I GGATG 2 cut(s) 685, 1422
BstKTI GATC 5 cut(s) 184, 538, 907, 1010, 1227
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 5 cut(s) 181, 535, 904, 1007, 1224
BstMWI GCNNNNNNNGC 2 cut(s) 314, 1209
BstNI CCWGG 2 cut(s) 779, 1326
BstNSI RCATGY 2 cut(s) 441, 1334
BstPI GGTNACC 1 cut(s) 477
BstSCI CCNGG 4 cut(s) 515, 777, 1197, 1324
BstSFI CTRYAG 1 cut(s) 1173
BstV1I GCAGC 3 cut(s) 144, 1202, 1275
BstX2I RGATCY 2 cut(s) 535, 1007
BstXI CCANNNNNNTGG 1 cut(s) 13
BstYI RGATCY 2 cut(s) 535, 1007
BsuRI GGCC 6 cut(s) 105, 363, 576, 717, 1203, 1212
BtgI CCRYGG 1 cut(s) 6
BtrI CACGTC 1 cut(s) 735
BtsCI GGATG 2 cut(s) 685, 1422
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 2 cut(s) 393, 735
BveI ACCTGC 1 cut(s) 920
Cac8I GCNNGC 5 cut(s) 107, 652, 670, 917, 1247
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 7 cut(s) 52, 104, 409, 460, 774, 1201, 1211
CseI GACGC 2 cut(s) 73, 645
CviAII CATG 7 cut(s) 7, 438, 474, 842, 1069, 1205, 1331
DdeI CTNAG 2 cut(s) 420, 710
DpnI GATC 5 cut(s) 183, 537, 906, 1009, 1226
DpnII GATC 5 cut(s) 181, 535, 904, 1007, 1224
EaeI YGGCCR 2 cut(s) 361, 715
Eco130I CCWWGG 3 cut(s) 6, 412, 954
Eco32I GATATC 1 cut(s) 1294
Eco47I GGWCC 4 cut(s) 52, 409, 460, 774
Eco57I CTGAAG 1 cut(s) 1301
Eco91I GGTNACC 1 cut(s) 477
EcoNI CCTNNNNNAGG 1 cut(s) 958
EcoO109I RGGNCCY 3 cut(s) 409, 460, 774
EcoO65I GGTNACC 1 cut(s) 477
EcoRI GAATTC 1 cut(s) 282
EcoRII CCWGG 2 cut(s) 777, 1324
EcoRV GATATC 1 cut(s) 1294
EcoT14I CCWWGG 3 cut(s) 6, 412, 954
ErhI CCWWGG 3 cut(s) 6, 412, 954
FaeI CATG 7 cut(s) 10, 441, 477, 845, 1072, 1208, 1334
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 3 cut(s) 76, 422, 760
FatI CATG 7 cut(s) 6, 437, 473, 841, 1068, 1204, 1330
FauI CCCGC 1 cut(s) 114
FauNDI CATATG 1 cut(s) 674
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 2 cut(s) 634, 1218
Fnu4HI GCNGC 3 cut(s) 158, 1191, 1264
FokI GGATG 1 cut(s) 692
Fsp4HI GCNGC 3 cut(s) 158, 1191, 1264
FspBI CTAG 2 cut(s) 651, 1423
GluI GCNGC 3 cut(s) 158, 1191, 1264
GsuI CTGGAG 2 cut(s) 915, 915
HaeIII GGCC 6 cut(s) 105, 363, 576, 717, 1203, 1212
HapII CCGG 3 cut(s) 102, 516, 1198
HgaI GACGC 2 cut(s) 73, 645
Hin1I GRCGYC 1 cut(s) 65
Hin1II CATG 7 cut(s) 10, 441, 477, 845, 1072, 1208, 1334
HincII GTYRAC 2 cut(s) 635, 856
HindII GTYRAC 2 cut(s) 635, 856
HinfI GANTC 4 cut(s) 197, 597, 1271, 1360
HpaI GTTAAC 1 cut(s) 856
HpaII CCGG 3 cut(s) 102, 516, 1198
HphI GGTGA 5 cut(s) 398, 471, 674, 1101, 1382
Hpy188I TCNGA 8 cut(s) 48, 181, 217, 281, 401, 423, 1012, 1281
Hpy188III TCNNGA 8 cut(s) 185, 194, 356, 827, 932, 1005, 1297, 1364
Hpy99I CGWCG 1 cut(s) 639
HpyAV CCTTC 8 cut(s) 53, 53, 98, 125, 235, 1276, 1331, 1369
HpyCH4III ACNGT 3 cut(s) 369, 397, 429
HpyCH4IV ACGT 2 cut(s) 734, 1098
HpyCH4V TGCA 8 cut(s) 468, 473, 668, 728, 866, 915, 1190, 1334
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 1209
HpyF3I CTNAG 2 cut(s) 420, 710
HpySE526I ACGT 2 cut(s) 734, 1098
Hsp92I GRCGYC 1 cut(s) 65
Hsp92II CATG 7 cut(s) 10, 441, 477, 845, 1072, 1208, 1334
KflI GGGWCCC 1 cut(s) 774
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 856
Kzo9I GATC 5 cut(s) 181, 535, 904, 1007, 1224
LmnI GCTCC 1 cut(s) 896
Lsp1109I GCAGC 3 cut(s) 144, 1202, 1275
LweI GCATC 1 cut(s) 655
MaeI CTAG 2 cut(s) 651, 1423
MaeII ACGT 2 cut(s) 734, 1098
MaeIII GTNAC 5 cut(s) 198, 320, 477, 682, 730
MalI GATC 5 cut(s) 183, 537, 906, 1009, 1226
MboI GATC 5 cut(s) 181, 535, 904, 1007, 1224
MboII GAAGA 4 cut(s) 40, 232, 878, 955
MfeI CAATTG 1 cut(s) 312
MflI RGATCY 2 cut(s) 535, 1007
MhlI GDGCHC 1 cut(s) 305
MlsI TGGCCA 1 cut(s) 717
MluCI AATT 8 cut(s) 76, 228, 282, 312, 454, 822, 1181, 1307
MluNI TGGCCA 1 cut(s) 717
MlyI GAGTC 2 cut(s) 206, 1369
MmeI TCCRAC 1 cut(s) 424
MnlI CCTC 7 cut(s) 4, 16, 142, 684, 928, 1147, 1333
Mox20I TGGCCA 1 cut(s) 717
MroXI GAANNNNTTC 2 cut(s) 211, 882
MscI TGGCCA 1 cut(s) 717
MseI TTAA 4 cut(s) 834, 855, 1256, 1310
MslI CAYNNNNRTG 3 cut(s) 11, 673, 1335
Msp20I TGGCCA 1 cut(s) 717
MspA1I CMGCKG 1 cut(s) 1230
MspCI CTTAAG 1 cut(s) 833
MspI CCGG 3 cut(s) 102, 516, 1198
MspR9I CCNGG 4 cut(s) 517, 779, 1199, 1326
MunI CAATTG 1 cut(s) 312
MvaI CCWGG 2 cut(s) 779, 1326
MwoI GCNNNNNNNGC 2 cut(s) 314, 1209
NciI CCSGG 2 cut(s) 517, 1199
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 1 cut(s) 674
NdeII GATC 5 cut(s) 181, 535, 904, 1007, 1224
NheI GCTAGC 1 cut(s) 650
NlaIII CATG 7 cut(s) 10, 441, 477, 845, 1072, 1208, 1334
NmeAIII GCCGAG 1 cut(s) 284
NmuCI GTSAC 4 cut(s) 198, 320, 477, 730
NspI RCATGY 2 cut(s) 441, 1334
PaqCI CACCTGC 1 cut(s) 920
PciI ACATGT 1 cut(s) 437
PdmI GAANNNNTTC 2 cut(s) 211, 882
PfeI GAWTC 2 cut(s) 597, 1271
PflMI CCANNNNNTGG 1 cut(s) 545
PfoI TCCNGGA 1 cut(s) 1324
PkrI GCNGC 3 cut(s) 159, 1192, 1265
PleI GAGTC 2 cut(s) 205, 1368
PpsI GAGTC 2 cut(s) 205, 1368
PpuMI RGGWCCY 3 cut(s) 409, 460, 774
PscI ACATGT 1 cut(s) 437
Psp5II RGGWCCY 3 cut(s) 409, 460, 774
Psp6I CCWGG 2 cut(s) 777, 1324
PspEI GGTNACC 1 cut(s) 477
PspGI CCWGG 2 cut(s) 777, 1324
PspPI GGNCC 7 cut(s) 52, 104, 409, 460, 774, 1201, 1211
PspPPI RGGWCCY 3 cut(s) 409, 460, 774
PsuI RGATCY 2 cut(s) 535, 1007
PvuII CAGCTG 1 cut(s) 1230
RseI CAYNNNNRTG 3 cut(s) 11, 673, 1335
SalI GTCGAC 1 cut(s) 633
SaqAI TTAA 4 cut(s) 834, 855, 1256, 1310
SatI GCNGC 3 cut(s) 158, 1191, 1264
Sau3AI GATC 5 cut(s) 181, 535, 904, 1007, 1224
Sau96I GGNCC 7 cut(s) 52, 104, 409, 460, 774, 1201, 1211
ScaI AGTACT 1 cut(s) 874
SchI GAGTC 2 cut(s) 206, 1369
ScrFI CCNGG 4 cut(s) 517, 779, 1199, 1326
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 1 cut(s) 655
SfcI CTRYAG 1 cut(s) 1173
SfiI GGCCNNNNNGGCC 1 cut(s) 1209
SinI GGWCC 4 cut(s) 52, 409, 460, 774
SmiMI CAYNNNNRTG 3 cut(s) 11, 673, 1335
SmlI CTYRAG 2 cut(s) 194, 833
SmoI CTYRAG 2 cut(s) 194, 833
Sse9I AATT 8 cut(s) 76, 228, 282, 312, 454, 822, 1181, 1307
SsiI CCGC 2 cut(s) 107, 566
SspI AATATT 2 cut(s) 212, 923
SspMI CTAG 2 cut(s) 651, 1423
StyD4I CCNGG 4 cut(s) 515, 777, 1197, 1324
StyI CCWWGG 3 cut(s) 6, 412, 954
TaaI ACNGT 3 cut(s) 369, 397, 429
TaiI ACGT 2 cut(s) 737, 1101
TaqI TCGA 1 cut(s) 634
TasI AATT 8 cut(s) 76, 228, 282, 312, 454, 822, 1181, 1307
TatI WGTACW 5 cut(s) 334, 432, 440, 785, 872
TfiI GAWTC 2 cut(s) 597, 1271
Tru1I TTAA 4 cut(s) 834, 855, 1256, 1310
Tru9I TTAA 4 cut(s) 834, 855, 1256, 1310
TscAI CASTG 2 cut(s) 400, 735
TseFI GTSAC 4 cut(s) 198, 320, 477, 730
TseI GCWGC 3 cut(s) 157, 1190, 1263
Tsp45I GTSAC 4 cut(s) 198, 320, 477, 730
TspDTI ATGAA 5 cut(s) 284, 342, 915, 956, 989
TspGWI ACGGA 3 cut(s) 65, 70, 1318
TspRI CASTG 2 cut(s) 400, 735
Van91I CCANNNNNTGG 1 cut(s) 545
Vha464I CTTAAG 1 cut(s) 833
VpaK11BI GGWCC 4 cut(s) 52, 409, 460, 774
XagI CCTNNNNNAGG 1 cut(s) 958
XapI RAATTY 4 cut(s) 76, 228, 282, 1181
XceI RCATGY 2 cut(s) 441, 1334
XmiI GTMKAC 2 cut(s) 634, 1218
XmnI GAANNNNTTC 2 cut(s) 211, 882
XspI CTAG 2 cut(s) 651, 1423
ZrmI AGTACT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.