pycom02g25610

Notchless protein homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
23454792 .. 23461216
6425 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g25610.7

Sequence Viewer

Length: 1425 bp
ATGACAATGGAGGTGGAAGGAGGAGAGGGGAAGGGGAAGACTATGTTGTGCGTTCTGACGGACCCAGATGGAAATCCATTAGGAACTCCGGTCAACTTTCCTCTAAACACAGAACCGCAACACCTTCAACAGATCGTCAATCAGCTTCGTCAAAATGAGGAGAGGCTACCGTATGCTTTCTATATAGCAGATAAGGAACTTGTTGAGTCACTTGGAAAGTTTGCAGAGAAGAACAAAAGTGAGTTAGATAATGGCAGCATTTCAGCTGCCATGATTGTATTTATCTTAAAAATTAATGATTTTAGGTCCATCTTTTCATGTCACACAGAAGCTGTACTTTCAGTTGCTTTTAGTCCTGATGGCCAACAGTTGGCGAGTGGTTCTGGTGATACCACCATCCGACTATGGGACCTTAATACTCAGACGCCGTTGTTCACATGTACAGGACATAAGAATTGGGTCCTTGCTATTGCATGGTCACCTGATGGGAAGTATCTTGCTAGTGGCAGCAAGGCTGGAGAACTTCAATGTTGGGATCCACGAACAGGGAAGCCATCAGGCAATCCACTTATTGGCCACAAGAAATGGATTACTGGAATCTCTTGGGAACCAGTCCACCTAAGCGCTCCATGTCGACGCTTTGTAAGTGCCGGCAAAGATGGTGATGCACGTATATGGGATGTTACGTTGAGGAAATCTGTTGTATGTCTTAGTGGCCACACACTTGCAGTAACATGTGTAAAATGGGGTGGAGATGGTTTCATATATACAGGCTCCCAGGATTGTACTATCAAAGTCTGGGAGACCACACAAGGAAAACTAATTCGTGAACTGAAGGGTCATGGTCATTGGGTTAACTCTCTTACATTGAGTACTGAATATGTTCTTCGTACGGGAGCCTTTGATCACACTGGCAAGCAATATTCATCTCCAGAGGAAATGAAGCAGGCAGCTTTGGAAAGATATAACAAAATGAAAGGCGATTCCCCTGAAAGATTGGTTTCTGGATCTGATGATTTCACAATGTTTCTATGGGAACCTTTTCTCAAAAAACAACCTAAAACTCGCATGACGGGTCACCAACAGCCTATAAACCACGTCTGCTTTTCACCTGATGGGCAATGGATAGCAAGTGCCTCATTTGATAGGTCTGTCAAGTTATGGAACGGTACTACTGGAAAATTTGTTGCAGCTTTCCGGGGCCATGTTGGTCCTGTCTACCAGATCAGCTGGTCAGCAGACAGCAGGCTACTTGTTAGTGGCAGCAAAGATTCCACTCTTAAGGTTTGGGATATCAAAGCACGGGCGCTAAAACTAGATCTTCCTGGCCATGCAGATGAGGTTTTTGCTGTCGATTGGAGTCCAGATGGTCAGAAGGTTGCTTCTGGTGGTAAAGATAGAGTTCTGAAGTTATGGATGGGCTAG

Protein Analysis

475

Amino Acids

52.44

Weight (kDa)

8.25

Isoelectric Point (pI)

32.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011105)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 370, 572
AccI GTMKAC 2 cut(s) 634, 1218
AciI CCGC 1 cut(s) 116
AclWI GGATC 3 cut(s) 530, 543, 1015
AcoI YGGCCR 4 cut(s) 361, 574, 715, 1327
AcsI RAATTY 1 cut(s) 1181
AcuI CTGAAG 1 cut(s) 854
AcyI GRCGYC 1 cut(s) 425
AfaI GTAC 6 cut(s) 336, 442, 787, 874, 892, 1171
AfeI AGCGCT 1 cut(s) 625
AfiI CCNNNNNNNGG 4 cut(s) 370, 406, 545, 572
AflII CTTAAG 1 cut(s) 1280
AflIII ACRYGT 2 cut(s) 437, 734
AgsI TTSAA 2 cut(s) 128, 527
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 2 cut(s) 777, 1324
AluBI AGCT 6 cut(s) 145, 266, 332, 953, 1193, 1230
AluI AGCT 6 cut(s) 145, 266, 332, 953, 1193, 1230
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 3 cut(s) 530, 543, 1015
AlwNI CAGNNNCTG 1 cut(s) 332
Aor51HI AGCGCT 1 cut(s) 625
AoxI GGCC 5 cut(s) 361, 574, 715, 1201, 1327
ApeKI GCWGC 6 cut(s) 255, 266, 507, 950, 1190, 1263
ApoI RAATTY 1 cut(s) 1181
AseI ATTAAT 1 cut(s) 294
Asp700I GAANNNNTTC 2 cut(s) 882, 1041
AspLEI GCGC 2 cut(s) 626, 1309
AspS9I GGNCC 6 cut(s) 61, 306, 409, 460, 1201, 1211
AsuC2I CCSGG 1 cut(s) 1199
AsuHPI GGTGA 5 cut(s) 398, 471, 674, 1070, 1101
AvaII GGWCC 5 cut(s) 61, 306, 409, 460, 1211
BalI TGGCCA 4 cut(s) 363, 576, 717, 1329
BamHI GGATCC 1 cut(s) 535
BbsI GAAGAC 1 cut(s) 44
BbvI GCAGC 6 cut(s) 253, 267, 519, 962, 1202, 1275
BceAI ACGGC 1 cut(s) 412
BciT130I CCWGG 2 cut(s) 779, 1326
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 1 cut(s) 1199
BcoDI GTCTC 1 cut(s) 797
BfaI CTAG 3 cut(s) 501, 1316, 1423
BfoI RGCGCY 2 cut(s) 627, 1310
BfrI CTTAAG 1 cut(s) 1280
BglII AGATCT 1 cut(s) 1318
BisI GCNGC 6 cut(s) 256, 267, 508, 951, 1191, 1264
BlsI GCNGC 6 cut(s) 257, 268, 509, 952, 1192, 1265
BmcAI AGTACT 1 cut(s) 874
Bme1390I CCNGG 3 cut(s) 779, 1199, 1326
Bme18I GGWCC 5 cut(s) 61, 306, 409, 460, 1211
BmgBI CACGTC 1 cut(s) 1099
BmgT120I GGNCC 6 cut(s) 61, 306, 409, 460, 1201, 1211
BmiI GGNNCC 9 cut(s) 63, 410, 461, 537, 609, 775, 898, 1038, 1202
BmrFI CCNGG 3 cut(s) 779, 1199, 1326
BmsI GCATC 1 cut(s) 655
BpiI GAAGAC 1 cut(s) 44
BpmI CTGGAG 2 cut(s) 537, 915
Bpu10I CCTNAGC 1 cut(s) 620
BpuMI CCSGG 1 cut(s) 1199
BsaAI YACGTR 1 cut(s) 671
BsaBI GATNNNNATC 1 cut(s) 72
BsaHI GRCGYC 1 cut(s) 425
BsaI GGTCTC 1 cut(s) 797
BsaJI CCNNGG 2 cut(s) 777, 1198
BsaWI WCCGGW 1 cut(s) 88
Bsc4I CCNNNNNNNGG 4 cut(s) 370, 406, 545, 572
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 4 cut(s) 598, 611, 916, 1180
Bse3DI GCAATG 1 cut(s) 1127
Bse8I GATNNNNATC 1 cut(s) 72
BseBI CCWGG 2 cut(s) 779, 1326
BseDI CCNNGG 2 cut(s) 777, 1198
BseGI GGATG 3 cut(s) 396, 685, 1422
BseJI GATNNNNATC 1 cut(s) 72
BseLI CCNNNNNNNGG 4 cut(s) 370, 406, 545, 572
BseMI GCAATG 1 cut(s) 1127
BseMII CTCAG 1 cut(s) 434
BseNI ACTGG 4 cut(s) 598, 611, 916, 1180
BseRI GAGGAG 2 cut(s) 36, 173
BseXI GCAGC 6 cut(s) 253, 267, 519, 962, 1202, 1275
BshFI GGCC 5 cut(s) 363, 576, 717, 1203, 1329
BsiSI CCGG 3 cut(s) 89, 651, 1198
BsiWI CGTACG 1 cut(s) 890
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 4 cut(s) 370, 406, 545, 572
BsmAI GTCTC 1 cut(s) 797
BsmFI GGGAC 1 cut(s) 422
BsnI GGCC 5 cut(s) 363, 576, 717, 1203, 1329
Bso31I GGTCTC 1 cut(s) 797
Bsp1407I TGTACA 1 cut(s) 440
Bsp143I GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
BspACI CCGC 1 cut(s) 116
BspANI GGCC 5 cut(s) 363, 576, 717, 1203, 1329
BspCNI CTCAG 1 cut(s) 433
BspLI GGNNCC 9 cut(s) 63, 410, 461, 537, 609, 775, 898, 1038, 1202
BspPI GGATC 3 cut(s) 530, 543, 1015
BspTI CTTAAG 1 cut(s) 1280
BspTNI GGTCTC 1 cut(s) 797
BsrDI GCAATG 1 cut(s) 1127
BsrFI RCCGGY 1 cut(s) 650
BsrGI TGTACA 1 cut(s) 440
BsrI ACTGG 4 cut(s) 598, 611, 916, 1180
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 2 cut(s) 777, 1198
BssMI GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
BssNI GRCGYC 1 cut(s) 425
Bst2UI CCWGG 2 cut(s) 779, 1326
Bst4CI ACNGT 3 cut(s) 171, 369, 1169
BstACI GRCGYC 1 cut(s) 425
BstAFI CTTAAG 1 cut(s) 1280
BstAUI TGTACA 1 cut(s) 440
BstBAI YACGTR 1 cut(s) 671
BstC8I GCNNGC 4 cut(s) 652, 917, 948, 1247
BstDEI CTNAG 3 cut(s) 420, 620, 710
BstEII GGTNACC 2 cut(s) 477, 1076
BstF5I GGATG 3 cut(s) 396, 685, 1422
BstH2I RGCGCY 2 cut(s) 627, 1310
BstHHI GCGC 2 cut(s) 626, 1309
BstKTI GATC 6 cut(s) 135, 538, 907, 1010, 1227, 1321
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
BstNI CCWGG 2 cut(s) 779, 1326
BstNSI RCATGY 2 cut(s) 441, 738
BstPI GGTNACC 2 cut(s) 477, 1076
BstSCI CCNGG 3 cut(s) 777, 1197, 1324
BstV1I GCAGC 6 cut(s) 253, 267, 519, 962, 1202, 1275
BstV2I GAAGAC 1 cut(s) 44
BstX2I RGATCY 3 cut(s) 535, 1007, 1318
BstYI RGATCY 3 cut(s) 535, 1007, 1318
BsuRI GGCC 5 cut(s) 363, 576, 717, 1203, 1329
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 3 cut(s) 396, 685, 1422
BtsIMutI CAGTG 1 cut(s) 909
Cac8I GCNNGC 4 cut(s) 652, 917, 948, 1247
CaiI CAGNNNCTG 1 cut(s) 332
CfoI GCGC 2 cut(s) 626, 1309
Cfr10I RCCGGY 1 cut(s) 650
Cfr13I GGNCC 6 cut(s) 61, 306, 409, 460, 1201, 1211
CseI GACGC 2 cut(s) 433, 645
Csp6I GTAC 6 cut(s) 335, 441, 786, 873, 891, 1170
CspCI CAANNNNNGTGG 1 cut(s) 29
CviQI GTAC 6 cut(s) 335, 441, 786, 873, 891, 1170
DdeI CTNAG 3 cut(s) 420, 620, 710
DpnI GATC 6 cut(s) 134, 537, 906, 1009, 1226, 1320
DpnII GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
EaeI YGGCCR 4 cut(s) 361, 574, 715, 1327
Eco31I GGTCTC 1 cut(s) 797
Eco32I GATATC 1 cut(s) 1294
Eco47I GGWCC 5 cut(s) 61, 306, 409, 460, 1211
Eco47III AGCGCT 1 cut(s) 625
Eco57I CTGAAG 1 cut(s) 854
Eco91I GGTNACC 2 cut(s) 477, 1076
EcoO109I RGGNCCY 2 cut(s) 409, 460
EcoO65I GGTNACC 2 cut(s) 477, 1076
EcoRII CCWGG 2 cut(s) 777, 1324
EcoRV GATATC 1 cut(s) 1294
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 1 cut(s) 422
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 2 cut(s) 634, 1218
Fnu4HI GCNGC 6 cut(s) 256, 267, 508, 951, 1191, 1264
FokI GGATG 2 cut(s) 383, 692
Fsp4HI GCNGC 6 cut(s) 256, 267, 508, 951, 1191, 1264
FspBI CTAG 3 cut(s) 501, 1316, 1423
GlaI GCGC 2 cut(s) 625, 1308
GluI GCNGC 6 cut(s) 256, 267, 508, 951, 1191, 1264
GsuI CTGGAG 2 cut(s) 537, 915
HaeII RGCGCY 2 cut(s) 627, 1310
HaeIII GGCC 5 cut(s) 363, 576, 717, 1203, 1329
HapII CCGG 3 cut(s) 89, 651, 1198
HgaI GACGC 2 cut(s) 433, 645
HhaI GCGC 2 cut(s) 626, 1309
Hin1I GRCGYC 1 cut(s) 425
Hin6I GCGC 2 cut(s) 624, 1307
HinP1I GCGC 2 cut(s) 624, 1307
HincII GTYRAC 3 cut(s) 94, 635, 856
HindII GTYRAC 3 cut(s) 94, 635, 856
HinfI GANTC 5 cut(s) 206, 597, 983, 1271, 1360
HpaI GTTAAC 1 cut(s) 856
HpaII CCGG 3 cut(s) 89, 651, 1198
HphI GGTGA 5 cut(s) 398, 471, 674, 1070, 1101
Hpy166II GTNNAC 7 cut(s) 94, 435, 616, 635, 830, 856, 1219
Hpy188I TCNGA 6 cut(s) 57, 401, 423, 1012, 1374, 1407
Hpy188III TCNNGA 5 cut(s) 356, 827, 932, 1005, 1364
Hpy8I GTNNAC 7 cut(s) 94, 435, 616, 635, 830, 856, 1219
Hpy99I CGWCG 1 cut(s) 639
HpyAV CCTTC 5 cut(s) 11, 25, 134, 829, 1369
HpyCH4III ACNGT 3 cut(s) 171, 369, 1169
HpyCH4IV ACGT 3 cut(s) 670, 686, 1098
HpyCH4V TGCA 6 cut(s) 224, 473, 668, 728, 1190, 1334
HpyF3I CTNAG 3 cut(s) 420, 620, 710
HpySE526I ACGT 3 cut(s) 670, 686, 1098
Hsp92I GRCGYC 1 cut(s) 425
HspAI GCGC 2 cut(s) 624, 1307
KroI GCCGGC 1 cut(s) 650
KroNI GCCGGC 1 cut(s) 652
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 856
Kzo9I GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
LmnI GCTCC 3 cut(s) 631, 779, 896
Lsp1109I GCAGC 6 cut(s) 253, 267, 519, 962, 1202, 1275
LweI GCATC 1 cut(s) 655
MaeI CTAG 3 cut(s) 501, 1316, 1423
MaeII ACGT 3 cut(s) 670, 686, 1098
MaeIII GTNAC 6 cut(s) 207, 320, 477, 682, 730, 1076
MalI GATC 6 cut(s) 134, 537, 906, 1009, 1226, 1320
MboI GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
MboII GAAGA 4 cut(s) 49, 241, 878, 1313
MflI RGATCY 3 cut(s) 535, 1007, 1318
MlsI TGGCCA 4 cut(s) 363, 576, 717, 1329
MluCI AATT 4 cut(s) 291, 454, 822, 1181
MluNI TGGCCA 4 cut(s) 363, 576, 717, 1329
MlyI GAGTC 2 cut(s) 215, 1369
MmeI TCCRAC 1 cut(s) 424
Mox20I TGGCCA 4 cut(s) 363, 576, 717, 1329
MroNI GCCGGC 1 cut(s) 650
MroXI GAANNNNTTC 2 cut(s) 882, 1041
MscI TGGCCA 4 cut(s) 363, 576, 717, 1329
MseI TTAA 5 cut(s) 287, 294, 414, 855, 1281
MslI CAYNNNNRTG 2 cut(s) 673, 1335
Msp20I TGGCCA 4 cut(s) 363, 576, 717, 1329
MspA1I CMGCKG 2 cut(s) 266, 1230
MspCI CTTAAG 1 cut(s) 1280
MspI CCGG 3 cut(s) 89, 651, 1198
MspR9I CCNGG 3 cut(s) 779, 1199, 1326
MvaI CCWGG 2 cut(s) 779, 1326
NaeI GCCGGC 1 cut(s) 652
NciI CCSGG 1 cut(s) 1199
NdeII GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
NgoMIV GCCGGC 1 cut(s) 650
NlaIV GGNNCC 9 cut(s) 63, 410, 461, 537, 609, 775, 898, 1038, 1202
NmuCI GTSAC 4 cut(s) 207, 320, 477, 1076
NspI RCATGY 2 cut(s) 441, 738
PciI ACATGT 2 cut(s) 437, 734
PdiI GCCGGC 1 cut(s) 652
PdmI GAANNNNTTC 2 cut(s) 882, 1041
PfeI GAWTC 3 cut(s) 597, 983, 1271
Pfl23II CGTACG 1 cut(s) 890
PflMI CCANNNNNTGG 2 cut(s) 370, 572
PkrI GCNGC 6 cut(s) 257, 268, 509, 952, 1192, 1265
PleI GAGTC 2 cut(s) 214, 1368
PpsI GAGTC 2 cut(s) 214, 1368
Ppu21I YACGTR 1 cut(s) 671
PpuMI RGGWCCY 2 cut(s) 409, 460
PscI ACATGT 2 cut(s) 437, 734
PshBI ATTAAT 1 cut(s) 294
Psp5II RGGWCCY 2 cut(s) 409, 460
Psp6I CCWGG 2 cut(s) 777, 1324
PspEI GGTNACC 2 cut(s) 477, 1076
PspGI CCWGG 2 cut(s) 777, 1324
PspLI CGTACG 1 cut(s) 890
PspN4I GGNNCC 9 cut(s) 63, 410, 461, 537, 609, 775, 898, 1038, 1202
PspPI GGNCC 6 cut(s) 61, 306, 409, 460, 1201, 1211
PspPPI RGGWCCY 2 cut(s) 409, 460
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 3 cut(s) 535, 1007, 1318
PvuII CAGCTG 2 cut(s) 266, 1230
RsaI GTAC 6 cut(s) 336, 442, 787, 874, 892, 1171
RsaNI GTAC 6 cut(s) 335, 441, 786, 873, 891, 1170
RseI CAYNNNNRTG 2 cut(s) 673, 1335
SalI GTCGAC 1 cut(s) 633
SaqAI TTAA 5 cut(s) 287, 294, 414, 855, 1281
SatI GCNGC 6 cut(s) 256, 267, 508, 951, 1191, 1264
Sau3AI GATC 6 cut(s) 132, 535, 904, 1007, 1224, 1318
Sau96I GGNCC 6 cut(s) 61, 306, 409, 460, 1201, 1211
ScaI AGTACT 1 cut(s) 874
SchI GAGTC 2 cut(s) 215, 1369
ScrFI CCNGG 3 cut(s) 779, 1199, 1326
SfaNI GCATC 1 cut(s) 655
SinI GGWCC 5 cut(s) 61, 306, 409, 460, 1211
SmiMI CAYNNNNRTG 2 cut(s) 673, 1335
SmlI CTYRAG 1 cut(s) 1280
SmoI CTYRAG 1 cut(s) 1280
Sse9I AATT 4 cut(s) 291, 454, 822, 1181
SsiI CCGC 1 cut(s) 116
SspI AATATT 1 cut(s) 923
SspMI CTAG 3 cut(s) 501, 1316, 1423
StyD4I CCNGG 3 cut(s) 777, 1197, 1324
TaaI ACNGT 3 cut(s) 171, 369, 1169
TaiI ACGT 3 cut(s) 673, 689, 1101
TaqI TCGA 2 cut(s) 634, 1353
TasI AATT 4 cut(s) 291, 454, 822, 1181
TatI WGTACW 4 cut(s) 334, 440, 785, 872
TfiI GAWTC 3 cut(s) 597, 983, 1271
Tru1I TTAA 5 cut(s) 287, 294, 414, 855, 1281
Tru9I TTAA 5 cut(s) 287, 294, 414, 855, 1281
TscAI CASTG 1 cut(s) 916
TseFI GTSAC 4 cut(s) 207, 320, 477, 1076
TseI GCWGC 6 cut(s) 255, 266, 507, 950, 1190, 1263
Tsp45I GTSAC 4 cut(s) 207, 320, 477, 1076
TspDTI ATGAA 5 cut(s) 306, 751, 915, 956, 989
TspGWI ACGGA 1 cut(s) 74
TspRI CASTG 1 cut(s) 916
Van91I CCANNNNNTGG 2 cut(s) 370, 572
Vha464I CTTAAG 1 cut(s) 1280
VpaK11BI GGWCC 5 cut(s) 61, 306, 409, 460, 1211
VspI ATTAAT 1 cut(s) 294
XapI RAATTY 1 cut(s) 1181
XceI RCATGY 2 cut(s) 441, 738
XmiI GTMKAC 2 cut(s) 634, 1218
XmnI GAANNNNTTC 2 cut(s) 882, 1041
XspI CTAG 3 cut(s) 501, 1316, 1423
ZrmI AGTACT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.