Rh1AG027300

Notchless protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0011105
Physical Location & Seq
Forward (+)
4912407 .. 4919725
7319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG027300.1

Sequence Viewer

Length: 1284 bp
ATGGCCATGGAAGACGAAGCAGCGGAGAAGAACGTGATGTGTCTTCTGACGGACCCAGAAGATGCCCCATTAGGAAAGTCTTTGTATCTTCCTCAACACACTGGCACCCAGCAACTTCAACAAATCGTCAATCAGCTTCTCAACAATGAGGATAAGGTGCCTTATACTTTCTATATAGCAGATAAGGAACTTAATCAATCGCTTGGCGAATATGCGGAGAAGAATAAAATTTCTGTGGAGAAGGTACTCAAAATCGTTTATCAACCACAAGCTGTTTTCCGAATTCGTCCAGTCAATCGTTGCTCGGCCACAATTGCTGGTCACTCAGAAGCTGTACTTTCAGTTGCTTTTAGTCCTGATGGTCGACAGTTGGCGAGTGGTTCTGGTGATACCACTGTCCGACTATGGGACCTTAATACTCAGACACCTTTGCACACGTGTTCAGGACATAAGAATTGGGTTCTTTGTATTGCATGGTCTGCTGATGGCAAGTATCTTGTTAGTGGGAGCAAGTCTGGAGAACTTCAATGTTGGGATCCACAGACAGGAAAACCAGCAGGCAATCCACTTACTGGCCACAAGAAATGGATTACTGGAATCTCTTGGGAACCAGTCCACCTTAGTGCTCCATGTAGACGCTTTGTAAGTGCTGGGAAAGATGGTGATGCACGCATATGGGACATCACGTTGAAGAAATGTGTTATATGTCTTAGTGGCCACACACTTGCAATAACTTGTGTAAAATGGGGTGGAGATGGTTTTATATATACAGGTTCCCAAGATTGTACAATTAAGGTCTGGGAGACTACACAGGGGAAGCTGATTCGTGAGCTAAAGGGTCATGGGCACTGGGTTAACTCTCTTGCATTGAGTACTGAATATGTTCTTCGCACTGGAGCTTATGATCACACTGGCAAGCAATATTCATCTCCTGAGGAAATGAAAAAGGTAGCTTTGGAAAGGTATAACAAAATGAAAGGTAAAGCTCCTGAACGATTGGTTTCTGGATCTGATGACTTTACTATGTTTCTATGGGAGCCTTTTGTCAGCAAACAACCCAAAGCTCGCATGACAGGTCATCAACAGCTTGTAAACCATGTCTACTTTTCACCTGATGGGCAATGGATAGCAAGTGCCTCATTTGATAGGTCTGTCAGGATATGGAATGGTACTACTGGGAAGTTTTTTGGAGTTCTCCGGGGCCATGTTGGTGCTGTTTACCAGATCAGGTCTGACTTTATTTCATTGTTTTTGTTTTCTGGATGTGCTTATGTTTATGGCTAA

Protein Analysis

427

Amino Acids

47.54

Weight (kDa)

8.62

Isoelectric Point (pI)

29.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NLE PF08154 12 - 71 1.3e-13 NLE (NUC135) domain
Beta-prop_Aladin PF25460 96 - 182 2.4e-07 Aladin seven-bladed propeller
WD40_Prp19 PF24814 99 - 146 2e-08 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 99 - 199 7e-21 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 100 - 234 7.4e-28 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 100 - 160 5.6e-12 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 100 - 228 4.9e-18 TEP-1 second beta-propeller
WD40_MABP1-WDR62_2nd PF24782 100 - 138 8.8e-06 MABP1/WDR62 second WD40 domain
WD40 PF00400 100 - 137 4.2e-12 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 101 - 156 1.6e-12 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 101 - 149 6.3e-09 WDHD1 first WD40 domain
WD40_MABP1-WDR62_1st PF24780 102 - 169 2.3e-08 MABP1/WDR62 first WD40 domain
WD40_Gbeta PF25391 102 - 151 7.5e-06 G protein beta WD-40 repeat protein
WDR55 PF24796 103 - 186 9.1e-09 WDR55
ANAPC4_WD40 PF12894 104 - 161 4.7e-07 Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 104 - 154 5.4e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2 PF23414 104 - 189 8.8e-15 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_EML PF23409 107 - 309 2.3e-12 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_IFT140_1st PF23383 108 - 193 1.4e-06 IFT140 first beta-propeller
Beta-prop_WDR19_1st PF23389 110 - 203 1.5e-07 WDR19 first beta-propeller
Beta-prop_WDR3_2nd PF25172 110 - 273 5e-18 WDR3 second beta-propeller domain
Beta-prop_IFT122_1st PF23381 112 - 253 8.7e-08 IFT122 first beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 120 - 233 3.7e-06 WDR90/POC16, second beta-propeller
WD40_Prp19 PF24814 141 - 304 1.2e-19 Prp19 WD40 domain
WD40 PF00400 142 - 179 6.4e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 145 - 234 1.4e-07 CAF1B/HIR1 beta-propeller domain
WD40_Gbeta PF25391 146 - 314 1.7e-10 G protein beta WD-40 repeat protein
WD40_WDHD1_1st PF24817 149 - 204 3.6e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 150 - 253 5.1e-17 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 151 - 211 6.4e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 190 - 308 1.6e-16 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 205 - 304 2.9e-16 WDR5 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 211 - 310 1.1e-06 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 211 - 394 6.1e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2 PF23414 212 - 318 9.2e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd PF25047 212 - 299 1.3e-06 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 218 - 304 4.3e-08 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 222 - 292 2.7e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 232 - 267 2.8e-07 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 240 - 304 3.7e-07 THOC3 beta-propeller domain
WD40_Prp19 PF24814 326 - 418 1.6e-09 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 330 - 422 1.8e-13 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 330 - 406 8.6e-06 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 331 - 402 1.4e-10 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 331 - 394 7.8e-07 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 332 - 413 4.2e-15 WDR5 beta-propeller domain
WD40 PF00400 352 - 389 1.6e-10 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 354 - 396 2e-06 WDR36/Utp21 second beta-propeller domain
EIF3I PF24805 357 - 423 1.2e-06 EIF3I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52820
fragaria_vesca FvH4_7g01500
malus_domestica MD02G1305600.v1.1 MD09G1280600.v1.1 MD17G1287700.v1.1
prunus_persica Prupe.2G020500_v2.0.a1
pyrus_communis pycom02g25610 pycom17g27070
rosa_chinensis RchiOBHm_Chr1g0317321
rosa_laevigata RLG00000029568 RLG00000030606
rosa_multiflora Rmu_sc0005092.1_g000002 Rmu_sc0013869.1_g000006
rosa_roxburghii Rroxscaffold_4G00330490
rosa_rugosa Rorug01G0015900
rosa_samantha Rh1AG027300 Rh1BG023200 Rh1CG025300 Rh1DG045900
rosa_wichuraiana Rw1G001910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 104, 157
AccB7I CCANNNNNTGG 1 cut(s) 572
AccI GTMKAC 3 cut(s) 364, 634, 1101
AciI CCGC 2 cut(s) 23, 215
AclWI GGATC 3 cut(s) 530, 543, 1015
AcoI YGGCCR 4 cut(s) 3, 306, 574, 715
AcsI RAATTY 2 cut(s) 228, 282
AcvI CACGTG 1 cut(s) 438
AfaI GTAC 5 cut(s) 246, 336, 787, 874, 1171
AfiI CCNNNNNNNGG 3 cut(s) 406, 545, 572
AflIII ACRYGT 2 cut(s) 435, 437
AgsI TTSAA 3 cut(s) 119, 527, 691
AleI CACNNNNGTG 1 cut(s) 621
Alw21I GWGCWC 1 cut(s) 628
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 3 cut(s) 530, 543, 1015
AlwNI CAGNNNCTG 1 cut(s) 332
AoxI GGCC 5 cut(s) 3, 306, 574, 715, 1201
ApeKI GCWGC 1 cut(s) 20
ApoI RAATTY 2 cut(s) 228, 282
Asp700I GAANNNNTTC 1 cut(s) 882
AspS9I GGNCC 3 cut(s) 52, 409, 1201
AsuC2I CCSGG 1 cut(s) 1199
AsuHPI GGTGA 3 cut(s) 398, 674, 1101
AvaII GGWCC 2 cut(s) 52, 409
AxyI CCTNAGG 1 cut(s) 933
BaeGI GKGCMC 1 cut(s) 849
BaeI ACNNNNGTAYC 2 cut(s) 381, 414
BalI TGGCCA 3 cut(s) 5, 576, 717
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 2 cut(s) 104, 157
BbrPI CACGTG 1 cut(s) 438
BbsI GAAGAC 2 cut(s) 18, 35
Bbv12I GWGCWC 1 cut(s) 628
BbvI GCAGC 1 cut(s) 32
BccI CCATC 5 cut(s) 353, 479, 653, 749, 1109
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 1 cut(s) 1199
BcoDI GTCTC 1 cut(s) 797
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
BmcAI AGTACT 1 cut(s) 874
Bme1390I CCNGG 1 cut(s) 1199
Bme18I GGWCC 2 cut(s) 52, 409
BmgT120I GGNCC 3 cut(s) 52, 409, 1201
BmiI GGNNCC 9 cut(s) 54, 106, 159, 410, 537, 609, 775, 1038, 1202
BmrFI CCNGG 1 cut(s) 1199
BmrI ACTGGG 2 cut(s) 859, 1185
BmsI GCATC 2 cut(s) 52, 655
BmuI ACTGGG 2 cut(s) 859, 1185
BpiI GAAGAC 2 cut(s) 18, 35
BpmI CTGGAG 2 cut(s) 537, 915
BpuMI CCSGG 1 cut(s) 1199
BsaAI YACGTR 1 cut(s) 438
BsaJI CCNNGG 2 cut(s) 6, 1198
Bsc4I CCNNNNNNNGG 3 cut(s) 406, 545, 572
Bse1I ACTGG 9 cut(s) 106, 290, 577, 598, 611, 854, 898, 916, 1180
Bse21I CCTNAGG 1 cut(s) 933
Bse3DI GCAATG 1 cut(s) 1127
BseDI CCNNGG 2 cut(s) 6, 1198
BseGI GGATG 1 cut(s) 1268
BseLI CCNNNNNNNGG 3 cut(s) 406, 545, 572
BseMI GCAATG 1 cut(s) 1127
BseMII CTCAG 3 cut(s) 339, 434, 924
BseNI ACTGG 9 cut(s) 106, 290, 577, 598, 611, 854, 898, 916, 1180
BseSI GKGCMC 1 cut(s) 849
BseXI GCAGC 1 cut(s) 32
BseYI CCCAGC 2 cut(s) 108, 650
BshFI GGCC 5 cut(s) 5, 308, 576, 717, 1203
BshNI GGYRCC 2 cut(s) 104, 157
BsiHKAI GWGCWC 1 cut(s) 628
BsiSI CCGG 1 cut(s) 1198
BslFI GGGAC 2 cut(s) 422, 692
BslI CCNNNNNNNGG 3 cut(s) 406, 545, 572
BsmAI GTCTC 1 cut(s) 797
BsmFI GGGAC 2 cut(s) 422, 692
BsnI GGCC 5 cut(s) 5, 308, 576, 717, 1203
Bsp1286I GDGCHC 2 cut(s) 628, 849
Bsp1407I TGTACA 1 cut(s) 785
Bsp143I GATC 4 cut(s) 535, 904, 1007, 1224
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 2 cut(s) 23, 215
BspANI GGCC 5 cut(s) 5, 308, 576, 717, 1203
BspCNI CTCAG 3 cut(s) 338, 433, 925
BspLI GGNNCC 9 cut(s) 54, 106, 159, 410, 537, 609, 775, 1038, 1202
BspPI GGATC 3 cut(s) 530, 543, 1015
BspT107I GGYRCC 2 cut(s) 104, 157
BsrDI GCAATG 1 cut(s) 1127
BsrGI TGTACA 1 cut(s) 785
BsrI ACTGG 9 cut(s) 106, 290, 577, 598, 611, 854, 898, 916, 1180
BssECI CCNNGG 2 cut(s) 6, 1198
BssMI GATC 4 cut(s) 535, 904, 1007, 1224
BssT1I CCWWGG 1 cut(s) 6
Bst4CI ACNGT 2 cut(s) 369, 397
BstAPI GCANNNNNTGC 1 cut(s) 479
BstAUI TGTACA 1 cut(s) 785
BstBAI YACGTR 1 cut(s) 438
BstC8I GCNNGC 4 cut(s) 559, 670, 917, 1066
BstDEI CTNAG 5 cut(s) 325, 420, 620, 710, 933
BstDSI CCRYGG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 1268
BstKTI GATC 4 cut(s) 538, 907, 1010, 1227
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 4 cut(s) 535, 904, 1007, 1224
BstMWI GCNNNNNNNGC 2 cut(s) 314, 479
BstSCI CCNGG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 849
BstV1I GCAGC 1 cut(s) 32
BstV2I GAAGAC 2 cut(s) 18, 35
BstX2I RGATCY 2 cut(s) 535, 1007
BstYI RGATCY 2 cut(s) 535, 1007
Bsu36I CCTNAGG 1 cut(s) 933
BsuRI GGCC 5 cut(s) 5, 308, 576, 717, 1203
BtgI CCRYGG 1 cut(s) 6
BtsCI GGATG 1 cut(s) 1268
BtsIMutI CAGTG 5 cut(s) 99, 393, 847, 891, 909
Cac8I GCNNGC 4 cut(s) 559, 670, 917, 1066
CaiI CAGNNNCTG 1 cut(s) 332
Cfr13I GGNCC 3 cut(s) 52, 409, 1201
CseI GACGC 1 cut(s) 645
Csp6I GTAC 5 cut(s) 245, 335, 786, 873, 1170
CviAII CATG 7 cut(s) 7, 474, 630, 842, 1069, 1097, 1205
CviQI GTAC 5 cut(s) 245, 335, 786, 873, 1170
DdeI CTNAG 5 cut(s) 325, 420, 620, 710, 933
DpnI GATC 4 cut(s) 537, 906, 1009, 1226
DpnII GATC 4 cut(s) 535, 904, 1007, 1224
EaeI YGGCCR 4 cut(s) 3, 306, 574, 715
Eco130I CCWWGG 1 cut(s) 6
Eco47I GGWCC 2 cut(s) 52, 409
Eco72I CACGTG 1 cut(s) 438
Eco81I CCTNAGG 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 409
EcoRI GAATTC 1 cut(s) 282
EcoT14I CCWWGG 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 7 cut(s) 10, 477, 633, 845, 1072, 1100, 1208
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 2 cut(s) 422, 692
FatI CATG 7 cut(s) 6, 473, 629, 841, 1068, 1096, 1204
FauNDI CATATG 1 cut(s) 674
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 3 cut(s) 364, 634, 1101
Fnu4HI GCNGC 1 cut(s) 21
FokI GGATG 1 cut(s) 1275
Fsp4HI GCNGC 1 cut(s) 21
GluI GCNGC 1 cut(s) 21
GsaI CCCAGC 2 cut(s) 112, 654
GsuI CTGGAG 2 cut(s) 537, 915
HaeIII GGCC 5 cut(s) 5, 308, 576, 717, 1203
HapII CCGG 1 cut(s) 1198
HgaI GACGC 1 cut(s) 645
Hin1II CATG 7 cut(s) 10, 477, 633, 845, 1072, 1100, 1208
HincII GTYRAC 2 cut(s) 365, 856
HindII GTYRAC 2 cut(s) 365, 856
HinfI GANTC 2 cut(s) 597, 823
HpaI GTTAAC 1 cut(s) 856
HpaII CCGG 1 cut(s) 1198
HphI GGTGA 3 cut(s) 398, 674, 1101
Hpy166II GTNNAC 7 cut(s) 365, 616, 635, 856, 1093, 1102, 1219
Hpy188I TCNGA 7 cut(s) 48, 281, 328, 401, 423, 1012, 1234
Hpy188III TCNNGA 9 cut(s) 356, 444, 516, 827, 932, 989, 1005, 1156, 1260
Hpy8I GTNNAC 7 cut(s) 365, 616, 635, 856, 1093, 1102, 1219
HpyAV CCTTC 1 cut(s) 235
HpyCH4III ACNGT 2 cut(s) 369, 397
HpyCH4IV ACGT 3 cut(s) 33, 437, 686
HpyCH4V TGCA 5 cut(s) 433, 473, 668, 728, 866
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 479
HpyF3I CTNAG 5 cut(s) 325, 420, 620, 710, 933
HpySE526I ACGT 3 cut(s) 33, 437, 686
Hsp92II CATG 7 cut(s) 10, 477, 633, 845, 1072, 1100, 1208
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 856
Kzo9I GATC 4 cut(s) 535, 904, 1007, 1224
LmnI GCTCC 5 cut(s) 507, 631, 896, 991, 1036
Lsp1109I GCAGC 1 cut(s) 32
LweI GCATC 2 cut(s) 52, 655
MaeII ACGT 3 cut(s) 33, 437, 686
MaeIII GTNAC 1 cut(s) 320
MalI GATC 4 cut(s) 537, 906, 1009, 1226
MboI GATC 4 cut(s) 535, 904, 1007, 1224
MboII GAAGA 8 cut(s) 23, 35, 40, 71, 80, 232, 703, 878
MfeI CAATTG 1 cut(s) 312
MflI RGATCY 2 cut(s) 535, 1007
MhlI GDGCHC 2 cut(s) 628, 849
MlsI TGGCCA 3 cut(s) 5, 576, 717
MluCI AATT 5 cut(s) 228, 282, 312, 454, 789
MluNI TGGCCA 3 cut(s) 5, 576, 717
MmeI TCCRAC 1 cut(s) 424
MnlI CCTC 4 cut(s) 102, 142, 928, 1147
Mox20I TGGCCA 3 cut(s) 5, 576, 717
MroXI GAANNNNTTC 1 cut(s) 882
MscI TGGCCA 3 cut(s) 5, 576, 717
MseI TTAA 4 cut(s) 192, 414, 792, 855
MslI CAYNNNNRTG 3 cut(s) 621, 673, 1209
Msp20I TGGCCA 3 cut(s) 5, 576, 717
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 1 cut(s) 1198
MspR9I CCNGG 1 cut(s) 1199
MunI CAATTG 1 cut(s) 312
MwoI GCNNNNNNNGC 2 cut(s) 314, 479
NciI CCSGG 1 cut(s) 1199
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 1 cut(s) 674
NdeII GATC 4 cut(s) 535, 904, 1007, 1224
NlaIII CATG 7 cut(s) 10, 477, 633, 845, 1072, 1100, 1208
NlaIV GGNNCC 9 cut(s) 54, 106, 159, 410, 537, 609, 775, 1038, 1202
NmeAIII GCCGAG 1 cut(s) 284
NmuCI GTSAC 1 cut(s) 320
OliI CACNNNNGTG 1 cut(s) 621
PdmI GAANNNNTTC 1 cut(s) 882
PfeI GAWTC 2 cut(s) 597, 823
PflMI CCANNNNNTGG 1 cut(s) 572
PkrI GCNGC 1 cut(s) 22
PmaCI CACGTG 1 cut(s) 438
PmlI CACGTG 1 cut(s) 438
Ppu21I YACGTR 1 cut(s) 438
PpuMI RGGWCCY 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 409
PspCI CACGTG 1 cut(s) 438
PspFI CCCAGC 2 cut(s) 108, 650
PspN4I GGNNCC 9 cut(s) 54, 106, 159, 410, 537, 609, 775, 1038, 1202
PspPI GGNCC 3 cut(s) 52, 409, 1201
PspPPI RGGWCCY 1 cut(s) 409
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 2 cut(s) 535, 1007
RsaI GTAC 5 cut(s) 246, 336, 787, 874, 1171
RsaNI GTAC 5 cut(s) 245, 335, 786, 873, 1170
RseI CAYNNNNRTG 3 cut(s) 621, 673, 1209
SalI GTCGAC 1 cut(s) 363
SaqAI TTAA 4 cut(s) 192, 414, 792, 855
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 4 cut(s) 535, 904, 1007, 1224
Sau96I GGNCC 3 cut(s) 52, 409, 1201
ScaI AGTACT 1 cut(s) 874
ScrFI CCNGG 1 cut(s) 1199
SduI GDGCHC 2 cut(s) 628, 849
SfaNI GCATC 2 cut(s) 52, 655
SinI GGWCC 2 cut(s) 52, 409
SmiMI CAYNNNNRTG 3 cut(s) 621, 673, 1209
Sse9I AATT 5 cut(s) 228, 282, 312, 454, 789
SsiI CCGC 2 cut(s) 23, 215
SspI AATATT 1 cut(s) 923
StyD4I CCNGG 1 cut(s) 1197
StyI CCWWGG 1 cut(s) 6
TaaI ACNGT 2 cut(s) 369, 397
TaiI ACGT 3 cut(s) 36, 440, 689
TaqI TCGA 1 cut(s) 364
TasI AATT 5 cut(s) 228, 282, 312, 454, 789
TatI WGTACW 3 cut(s) 334, 785, 872
TfiI GAWTC 2 cut(s) 597, 823
Tru1I TTAA 4 cut(s) 192, 414, 792, 855
Tru9I TTAA 4 cut(s) 192, 414, 792, 855
TscAI CASTG 5 cut(s) 106, 400, 854, 898, 916
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 4 cut(s) 915, 956, 989, 1233
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 5 cut(s) 106, 400, 854, 898, 916
Van91I CCANNNNNTGG 1 cut(s) 572
VpaK11BI GGWCC 2 cut(s) 52, 409
XapI RAATTY 2 cut(s) 228, 282
XmiI GTMKAC 3 cut(s) 364, 634, 1101
XmnI GAANNNNTTC 1 cut(s) 882
ZrmI AGTACT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.