AT5G54730

Breast carcinoma amplified sequence 3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006822
Physical Location & Seq
Reverse (-)
22233789 .. 22237370
3582 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G54730.1

Sequence Viewer

Length: 2292 bp
ATGAAGAAAAACGGTGACGGTTCTTCTCCCAAGTCGCCAGACGGAGTTGTATCACGATCAGCTCGTAGCTCGTTTCGTGCTTTGTCTAATTGCCTTAAGGTGATTTCTTCTGGTGCTTCTACTGTTGCTCGCTCCGCCGTATCTGCCGCTTCTTCCGCCGTTGAATCTCATCACGATCAGGTACTATGGGCGGGGTTTGATAATCTACAGAAAGAGGATGGTGATACACGAAGAGTTCTTCTACTAGCATTTAAGTCTGGATTTCAAGTTTGGGATGTTGAAGATACAGAGAATGTTCATGTTATAGTTTCTGCACATGATGGACAAGCATTCTTTATGCAAATGCTACTGAATCCAATAAACTCTGGAGTTTTAGATGATAGGTTTTATAAGAGCCGTCCTCTTTTGGCTGTGTGTGGTGATTATTCAAGTAAAAAGATCAGTTCTGATAACCCCGGAAGTGAAACCGTAGCTACTCCTACTAATGTCTATGTCTACTCGTTAAAGTCTCAGTCTTATGTGCATACGTTGAAATTCCGGGCTACCATCTATTCGGTTAGGTGCTGTTCTCGGATTGTTGCTGTACTACAAGCAGCTCAGATAGATTGCTTTGATGCTGCAACACTGGAAATGGATTACAGGATTGTAACTAACTCCATTGTGTGTGGCTCCTTGGGTGTTGGATATGGCCCTCTTGCTGTTGGTCCACGATGGATTGCGTATAGTGGAAGTCGTATTGCTACCTCAAGTTCTGCAATTTTTACTTCAGAAATTGTCTCACTGTCAACATCATCACCCAGTGTTGCACAATTTGCAAGAGACTCGAGTAAGCAGCTTGCTTCTGGGATAGCAAATCTTGGAGACAAAGGGTACAGATCATTGACTAAATACTGCTCAGAGGTTTTGCCCAATCCGTATATTCCTGGTTTGAAAGGCATTGGAGTTGGTAATGAAAAAGTAGCAGATGCAGAGAGCATAGGAATGGTTATTGTCAAAGATATCACAAACAAAAGCGTCATAACGCAGTTTAAGGCACACAAGAGTCCGATTTCAGCTTTGTGCTTTGACCAAAGCGGCCTGCTTTTGGTGACTGCTTCGATTCAGGGGCATAATATTAACGTCTTTAGAATAATGCCAACAATCTCTACAAGCAGAGCTGTGAAGACAACGACTTTTGCCCATCTGTTCAGGCTTCAGCGCGGTTTTACTAATGCGGTGATACAAGACATATGTTTCAGCAAGGATAGCAATTTGATTGTGGTTGGTTCTTCAAGAGGGACAAGTCATCTTTTTGAGATTAATCCTGAGAAAGAGGGGGATGCTCCGGTTCCTATGTCTGCAATCAGTAGGATAAGAAGCGGAAACAGCAGCGGATGGATTGGGACTGTGAGCGGTGCAGCATCTGCAGCAGCTGGAATGGTTGCAGGCTCGGTTCCGGGTACAGTCACATCCACTTTCTGTTACTGCGATGAAAAGAGTAACAATAACTACTATGGTTCTGTTGCTGATATGTGCTCCAAGACAAATCTTCTGGTGTTTGCTCCTTCTGGATGTATGACACAGTATGCGTTACGGGAACATCAGGTTGGTGTTGGTCATGAGACTGCTGCAATGACGGGGTTTGATTCTGAGTCAGGTCTAGAGACAGAAGGAAAATTAGCGGTAGATCCAATAAGAAGGTGGTCCATGATCCAAAACCAATCTAGAAGAGAGACGCATGACCCCCACAGTGACATATATGGAGGTGGAACATCAGTGGATTCTAAAAGTAAAGTGTTTCCAGAGGTTGTTAGAAAACAAAGTGTTGAGGAAGCTTGGAAAGTATCTAAGAAAGGAACTACCCGTGTGGTGGATAAGCGTCATTTGTACATATATGAAGCAGAACAACAGCAAACGCATCTGCCGACTCAGCTACCCTTATGGGCAAGGCGAAAGTTTAGGTTTCAAGAATTGGTATTGAATCGGGGTGAAGAGATTAGTGGTGGAGGTGGAAGGGAGATGGAGATTGAAGGAATCCAAACTCGAACTATTGAAGCAAGAACAAGAGATTTGGTTCCAGTCTGGGGTTATCTCCAATCTCCAAGGTCTCAGCAAGTGATAAACGAATCAATACAGAGTCCAAGTACCACTACACAAGATGACAAAGTGGCTACTCTGGAGGGTCATGGAACAGAGACTGATCTCGGTGCTGTACATAGCGAAGAACAGACACAAAGCGAGCCTGTAGATAAAGAAGGTATTGCAGAGGAGAAGAATCACAGTGAAGATGAGGATGAAGAGCAAGTGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

763

Amino Acids

82.78

Weight (kDa)

6.18

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCAS3_WD40 PF21034 76 - 436 5.1e-41 BCAS3, WD40 repeat
BCAS3 PF12490 544 - 689 5.5e-41 BCAS3 microtubule associated cell migration factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 390
AccBSI CCGCTC 1 cut(s) 1392
AccI GTMKAC 1 cut(s) 495
AccII CGCG 1 cut(s) 1200
AclWI GGATC 2 cut(s) 1661, 1684
AcsI RAATTY 1 cut(s) 533
AcuI CTGAAG 2 cut(s) 750, 1178
AdeI CACNNNGTG 1 cut(s) 800
AfaI GTAC 7 cut(s) 183, 585, 872, 1441, 1868, 2125, 2193
AfiI CCNNNNNNNGG 3 cut(s) 1084, 1849, 2063
AflII CTTAAG 1 cut(s) 95
AjnI CCWGG 1 cut(s) 922
AjuI GAANNNNNNNTTGG 2 cut(s) 1569, 1601
Alw21I GWGCWC 1 cut(s) 1517
Alw26I GTCTC 9 cut(s) 513, 781, 813, 855, 1595, 1637, 1706, 2091, 2168
AlwI GGATC 2 cut(s) 1661, 1684
AlwNI CAGNNNCTG 3 cut(s) 1403, 1412, 2177
Ama87I CYCGRG 1 cut(s) 823
AoxI GGCC 2 cut(s) 688, 1075
ApeKI GCWGC 8 cut(s) 593, 617, 832, 1368, 1397, 1406, 1409, 1607
ApoI RAATTY 1 cut(s) 533
AseI ATTAAT 1 cut(s) 1299
AspLEI GCGC 1 cut(s) 1200
AspS9I GGNCC 3 cut(s) 689, 704, 1683
AsuC2I CCSGG 3 cut(s) 456, 539, 1437
AsuHPI GGTGA 8 cut(s) 26, 112, 233, 431, 786, 1099, 1228, 1979
AvaI CYCGRG 1 cut(s) 823
AvaII GGWCC 2 cut(s) 704, 1683
BbsI GAAGAC 1 cut(s) 1169
Bbv12I GWGCWC 1 cut(s) 1517
BbvI GCAGC 8 cut(s) 604, 605, 844, 1380, 1409, 1418, 1421, 1594
BccI CCATC 7 cut(s) 212, 314, 554, 705, 1188, 1368, 1993
BceAI ACGGC 3 cut(s) 122, 143, 381
BcgI CGANNNNNNTGC 2 cut(s) 804, 838
BciT130I CCWGG 1 cut(s) 924
BcnI CCSGG 3 cut(s) 456, 539, 1437
BcoDI GTCTC 9 cut(s) 513, 781, 813, 855, 1595, 1637, 1706, 2091, 2168
BfaI CTAG 3 cut(s) 245, 1640, 1704
BfmI CTRYAG 3 cut(s) 206, 1404, 2223
BfrI CTTAAG 1 cut(s) 95
Bme1390I CCNGG 4 cut(s) 456, 539, 924, 1437
Bme18I GGWCC 2 cut(s) 704, 1683
BmeT110I CYCGRG 1 cut(s) 823
BmgT120I GGNCC 3 cut(s) 689, 704, 1683
BmiI GGNNCC 4 cut(s) 670, 1329, 1434, 2055
BmrFI CCNGG 4 cut(s) 456, 539, 924, 1437
BmrI ACTGGG 1 cut(s) 792
BmsI GCATC 5 cut(s) 604, 955, 1309, 1409, 1906
BmuI ACTGGG 1 cut(s) 792
BpiI GAAGAC 1 cut(s) 1169
BplI GAGNNNNNCTC 2 cut(s) 385, 417
BpmI CTGGAG 2 cut(s) 387, 2177
BpuEI CTTGAG 1 cut(s) 730
BpuMI CCSGG 3 cut(s) 456, 539, 1437
BsaI GGTCTC 1 cut(s) 2091
BsaJI CCNNGG 3 cut(s) 454, 672, 2081
BsaWI WCCGGW 1 cut(s) 1324
Bsc4I CCNNNNNNNGG 3 cut(s) 1084, 1849, 2063
Bse1I ACTGG 3 cut(s) 630, 798, 2057
Bse3DI GCAATG 1 cut(s) 1617
BseBI CCWGG 1 cut(s) 924
BseDI CCNNGG 3 cut(s) 454, 672, 2081
BseGI GGATG 7 cut(s) 223, 280, 1324, 1379, 1448, 1556, 2278
BseLI CCNNNNNNNGG 3 cut(s) 1084, 1849, 2063
BseMI GCAATG 1 cut(s) 1617
BseMII CTCAG 7 cut(s) 524, 611, 909, 1296, 1620, 1922, 2102
BseNI ACTGG 3 cut(s) 630, 798, 2057
BseRI GAGGAG 1 cut(s) 2261
BseXI GCAGC 8 cut(s) 604, 605, 844, 1380, 1409, 1418, 1421, 1594
BsgI GTGCAG 2 cut(s) 297, 1416
Bsh1236I CGCG 1 cut(s) 1200
BshFI GGCC 2 cut(s) 690, 1077
BsiHKAI GWGCWC 1 cut(s) 1517
BsiHKCI CYCGRG 1 cut(s) 823
BsiSI CCGG 4 cut(s) 456, 538, 1325, 1436
BslFI GGGAC 2 cut(s) 1291, 1396
BslI CCNNNNNNNGG 3 cut(s) 1084, 1849, 2063
BsmAI GTCTC 9 cut(s) 513, 781, 813, 855, 1595, 1637, 1706, 2091, 2168
BsmBI CGTCTC 1 cut(s) 1706
BsmFI GGGAC 2 cut(s) 1291, 1396
BsmI GAATGC 1 cut(s) 329
BsnI GGCC 2 cut(s) 690, 1077
Bso31I GGTCTC 1 cut(s) 2091
BsoBI CYCGRG 1 cut(s) 823
Bsp1286I GDGCHC 1 cut(s) 1517
Bsp1407I TGTACA 2 cut(s) 1866, 2191
Bsp143I GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
BspANI GGCC 2 cut(s) 690, 1077
BspCNI CTCAG 7 cut(s) 523, 610, 908, 1297, 1621, 1921, 2101
BspFNI CGCG 1 cut(s) 1200
BspHI TCATGA 1 cut(s) 1597
BspLI GGNNCC 4 cut(s) 670, 1329, 1434, 2055
BspMAI CTGCAG 1 cut(s) 1408
BspPI GGATC 2 cut(s) 1661, 1684
BspQI GCTCTTC 1 cut(s) 2271
BspTI CTTAAG 1 cut(s) 95
BspTNI GGTCTC 1 cut(s) 2091
BsrBI CCGCTC 1 cut(s) 1392
BsrDI GCAATG 1 cut(s) 1617
BsrGI TGTACA 2 cut(s) 1866, 2191
BsrI ACTGG 3 cut(s) 630, 798, 2057
BssECI CCNNGG 3 cut(s) 454, 672, 2081
BssMI GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
BssT1I CCWWGG 2 cut(s) 672, 2081
Bst2UI CCWGG 1 cut(s) 924
Bst6I CTCTTC 4 cut(s) 226, 1702, 1965, 2271
BstAFI CTTAAG 1 cut(s) 95
BstAPI GCANNNNNTGC 2 cut(s) 812, 1403
BstAUI TGTACA 2 cut(s) 1866, 2191
BstC8I GCNNGC 5 cut(s) 130, 837, 1079, 1426, 2219
BstDEI CTNAG 8 cut(s) 510, 597, 895, 1305, 1629, 1827, 1908, 2088
BstF5I GGATG 7 cut(s) 223, 280, 1324, 1379, 1448, 1556, 2278
BstFNI CGCG 1 cut(s) 1200
BstHHI GCGC 1 cut(s) 1200
BstKTI GATC 7 cut(s) 59, 178, 441, 878, 1669, 1692, 2182
BstMAI GTCTC 9 cut(s) 513, 781, 813, 855, 1595, 1637, 1706, 2091, 2168
BstMBI GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
BstMWI GCNNNNNNNGC 9 cut(s) 134, 143, 155, 812, 1245, 1365, 1403, 1406, 1909
BstNI CCWGG 1 cut(s) 924
BstSCI CCNGG 4 cut(s) 454, 537, 922, 1435
BstSFI CTRYAG 3 cut(s) 206, 1404, 2223
BstUI CGCG 1 cut(s) 1200
BstV1I GCAGC 8 cut(s) 604, 605, 844, 1380, 1409, 1418, 1421, 1594
BstV2I GAAGAC 1 cut(s) 1169
BstX2I RGATCY 1 cut(s) 1666
BstYI RGATCY 1 cut(s) 1666
BsuRI GGCC 2 cut(s) 690, 1077
BtgZI GCGATG 1 cut(s) 1482
BtsCI GGATG 7 cut(s) 223, 280, 1324, 1379, 1448, 1556, 2278
BtsIMutI CAGTG 6 cut(s) 623, 779, 805, 1735, 1761, 2266
Cac8I GCNNGC 5 cut(s) 130, 837, 1079, 1426, 2219
CaiI CAGNNNCTG 3 cut(s) 1403, 1412, 2177
CciI TCATGA 1 cut(s) 1597
CfoI GCGC 1 cut(s) 1200
Cfr13I GGNCC 3 cut(s) 689, 704, 1683
CseI GACGC 3 cut(s) 1003, 1723, 1847
Csp6I GTAC 7 cut(s) 182, 584, 871, 1440, 1867, 2124, 2192
CviAII CATG 6 cut(s) 299, 317, 1598, 1687, 1718, 2165
CviQI GTAC 7 cut(s) 182, 584, 871, 1440, 1867, 2124, 2192
DdeI CTNAG 8 cut(s) 510, 597, 895, 1305, 1629, 1827, 1908, 2088
DpnI GATC 7 cut(s) 58, 177, 440, 877, 1668, 1691, 2181
DpnII GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
DraIII CACNNNGTG 1 cut(s) 800
Eam1104I CTCTTC 4 cut(s) 226, 1702, 1965, 2271
EarI CTCTTC 4 cut(s) 226, 1702, 1965, 2271
EciI GGCGGA 2 cut(s) 124, 145
Eco130I CCWWGG 2 cut(s) 672, 2081
Eco31I GGTCTC 1 cut(s) 2091
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 704, 1683
Eco57I CTGAAG 2 cut(s) 750, 1178
Eco88I CYCGRG 1 cut(s) 823
EcoRII CCWGG 1 cut(s) 922
EcoRV GATATC 1 cut(s) 1000
EcoT14I CCWWGG 2 cut(s) 672, 2081
ErhI CCWWGG 2 cut(s) 672, 2081
Esp3I CGTCTC 1 cut(s) 1706
FaeI CATG 6 cut(s) 302, 320, 1601, 1690, 1721, 2168
FaqI GGGAC 2 cut(s) 1291, 1396
FatI CATG 6 cut(s) 298, 316, 1597, 1686, 1717, 2164
FauI CCCGC 1 cut(s) 184
FauNDI CATATG 1 cut(s) 1229
FblI GTMKAC 1 cut(s) 495
FokI GGATG 7 cut(s) 230, 287, 1331, 1386, 1435, 1563, 2285
FspBI CTAG 3 cut(s) 245, 1640, 1704
GlaI GCGC 1 cut(s) 1199
GsuI CTGGAG 2 cut(s) 387, 2177
HaeIII GGCC 2 cut(s) 690, 1077
HapII CCGG 4 cut(s) 456, 538, 1325, 1436
HgaI GACGC 3 cut(s) 1003, 1723, 1847
HhaI GCGC 1 cut(s) 1200
Hin1II CATG 6 cut(s) 302, 320, 1601, 1690, 1721, 2168
Hin6I GCGC 1 cut(s) 1198
HinP1I GCGC 1 cut(s) 1198
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HindIII AAGCTT 1 cut(s) 1812
HpaII CCGG 4 cut(s) 456, 538, 1325, 1436
HphI GGTGA 8 cut(s) 26, 112, 233, 431, 786, 1099, 1228, 1979
Hpy166II GTNNAC 3 cut(s) 496, 707, 786
Hpy188I TCNGA 7 cut(s) 448, 573, 600, 769, 898, 1047, 1630
Hpy8I GTNNAC 3 cut(s) 496, 707, 786
HpyAV CCTTC 6 cut(s) 1554, 1643, 1671, 1986, 2003, 2228
HpyCH4IV ACGT 2 cut(s) 527, 1119
HpyF10VI GCNNNNNNNGC 9 cut(s) 134, 143, 155, 812, 1245, 1365, 1403, 1406, 1909
HpyF3I CTNAG 8 cut(s) 510, 597, 895, 1305, 1629, 1827, 1908, 2088
HpySE526I ACGT 2 cut(s) 527, 1119
Hsp92II CATG 6 cut(s) 302, 320, 1601, 1690, 1721, 2168
HspAI GCGC 1 cut(s) 1198
Kzo9I GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
LguI GCTCTTC 1 cut(s) 2271
LmnI GCTCC 5 cut(s) 137, 674, 1327, 1520, 1546
Lsp1109I GCAGC 8 cut(s) 604, 605, 844, 1380, 1409, 1418, 1421, 1594
LweI GCATC 5 cut(s) 604, 955, 1309, 1409, 1906
MaeI CTAG 3 cut(s) 245, 1640, 1704
MaeII ACGT 2 cut(s) 527, 1119
MaeIII GTNAC 8 cut(s) 14, 646, 1087, 1444, 1460, 1478, 1569, 1730
MalI GATC 7 cut(s) 58, 177, 440, 877, 1668, 1691, 2181
MbiI CCGCTC 1 cut(s) 1392
MboI GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
MflI RGATCY 1 cut(s) 1666
MhlI GDGCHC 1 cut(s) 1517
MluCI AATT 8 cut(s) 88, 533, 756, 771, 809, 1249, 1655, 1949
MlyI GAGTC 5 cut(s) 815, 1051, 1640, 1900, 2125
MmeI TCCRAC 1 cut(s) 661
MseI TTAA 6 cut(s) 96, 252, 503, 1029, 1116, 1299
MslI CAYNNNNRTG 1 cut(s) 980
MspA1I CMGCKG 2 cut(s) 1371, 1412
MspCI CTTAAG 1 cut(s) 95
MspI CCGG 4 cut(s) 456, 538, 1325, 1436
MspR9I CCNGG 4 cut(s) 456, 539, 924, 1437
Mva1269I GAATGC 1 cut(s) 329
MvaI CCWGG 1 cut(s) 924
MvnI CGCG 1 cut(s) 1200
MwoI GCNNNNNNNGC 9 cut(s) 134, 143, 155, 812, 1245, 1365, 1403, 1406, 1909
NciI CCSGG 3 cut(s) 456, 539, 1437
NdeI CATATG 1 cut(s) 1229
NdeII GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
NlaIII CATG 6 cut(s) 302, 320, 1601, 1690, 1721, 2168
NlaIV GGNNCC 4 cut(s) 670, 1329, 1434, 2055
NmuCI GTSAC 4 cut(s) 14, 1087, 1444, 1730
PaeR7I CTCGAG 1 cut(s) 823
PagI TCATGA 1 cut(s) 1597
PciSI GCTCTTC 1 cut(s) 2271
PcsI WCGNNNNNNNCGW 2 cut(s) 61, 1901
PctI GAATGC 1 cut(s) 329
PfeI GAWTC 9 cut(s) 164, 352, 1099, 1625, 1760, 1960, 2013, 2105, 2254
PleI GAGTC 5 cut(s) 815, 1050, 1639, 1900, 2124
PpsI GAGTC 5 cut(s) 815, 1050, 1639, 1900, 2124
PshBI ATTAAT 1 cut(s) 1299
PsiI TTATAA 1 cut(s) 390
Psp6I CCWGG 1 cut(s) 922
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 4 cut(s) 670, 1329, 1434, 2055
PspPI GGNCC 3 cut(s) 689, 704, 1683
PspXI VCTCGAGB 1 cut(s) 823
PstI CTGCAG 1 cut(s) 1408
PstNI CAGNNNCTG 3 cut(s) 1403, 1412, 2177
PsuI RGATCY 1 cut(s) 1666
PvuII CAGCTG 1 cut(s) 1412
RsaI GTAC 7 cut(s) 183, 585, 872, 1441, 1868, 2125, 2193
RsaNI GTAC 7 cut(s) 182, 584, 871, 1440, 1867, 2124, 2192
RseI CAYNNNNRTG 1 cut(s) 980
SapI GCTCTTC 1 cut(s) 2271
SaqAI TTAA 6 cut(s) 96, 252, 503, 1029, 1116, 1299
Sau3AI GATC 7 cut(s) 56, 175, 438, 875, 1666, 1689, 2179
Sau96I GGNCC 3 cut(s) 689, 704, 1683
SchI GAGTC 5 cut(s) 815, 1051, 1640, 1900, 2125
ScrFI CCNGG 4 cut(s) 456, 539, 924, 1437
SduI GDGCHC 1 cut(s) 1517
SfaNI GCATC 5 cut(s) 604, 955, 1309, 1409, 1906
SfcI CTRYAG 3 cut(s) 206, 1404, 2223
Sfr274I CTCGAG 1 cut(s) 823
SinI GGWCC 2 cut(s) 704, 1683
SlaI CTCGAG 1 cut(s) 823
SmiMI CAYNNNNRTG 1 cut(s) 980
SmlI CTYRAG 3 cut(s) 95, 745, 823
SmoI CTYRAG 3 cut(s) 95, 745, 823
Sse9I AATT 8 cut(s) 88, 533, 756, 771, 809, 1249, 1655, 1949
SspI AATATT 1 cut(s) 1114
SspMI CTAG 3 cut(s) 245, 1640, 1704
StyD4I CCNGG 4 cut(s) 454, 537, 922, 1435
StyI CCWWGG 2 cut(s) 672, 2081
TaiI ACGT 2 cut(s) 530, 1122
TaqI TCGA 3 cut(s) 824, 1097, 2023
TasI AATT 8 cut(s) 88, 533, 756, 771, 809, 1249, 1655, 1949
TatI WGTACW 3 cut(s) 583, 1866, 2191
TauI GCSGC 2 cut(s) 149, 1077
TfiI GAWTC 9 cut(s) 164, 352, 1099, 1625, 1760, 1960, 2013, 2105, 2254
Tru1I TTAA 6 cut(s) 96, 252, 503, 1029, 1116, 1299
Tru9I TTAA 6 cut(s) 96, 252, 503, 1029, 1116, 1299
TscAI CASTG 6 cut(s) 630, 786, 805, 1735, 1761, 2266
TseFI GTSAC 4 cut(s) 14, 1087, 1444, 1730
TseI GCWGC 8 cut(s) 593, 617, 832, 1368, 1397, 1406, 1409, 1607
Tsp45I GTSAC 4 cut(s) 14, 1087, 1444, 1730
TspDTI ATGAA 6 cut(s) 17, 287, 966, 1485, 1890, 2289
TspGWI ACGGA 2 cut(s) 57, 903
TspRI CASTG 6 cut(s) 630, 786, 805, 1735, 1761, 2266
Vha464I CTTAAG 1 cut(s) 95
VpaK11BI GGWCC 2 cut(s) 704, 1683
VspI ATTAAT 1 cut(s) 1299
XapI RAATTY 1 cut(s) 533
XbaI TCTAGA 2 cut(s) 1639, 1703
XcmI CCANNNNNNNNNTGG 1 cut(s) 1677
XhoI CTCGAG 1 cut(s) 823
XmiI GTMKAC 1 cut(s) 495
XspI CTAG 3 cut(s) 245, 1640, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.