Rmu_sc0005002.1_g000029

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005002.1
OG0006822
Physical Location & Seq
Forward (+)
129955 .. 140035
10081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005002.1_g000029.1.cds

Sequence Viewer

Length: 2940 bp
atgtcgtccggctgtctcccgcagtcgcaccagtggccacggcttcatcttgaagtcgtcgaaatccctgtggctttgactttcacaaaagagctcctaaaaaagagaatagaagccgagaagctctcggtactctccgaggttccggcgcatttttcggcgactccgttcctcttgaagaagaagaagaagaagaagttaaaatcatcaggaggtgttttcttgatctgggtattgctggttttggtggttcttgggatgatgaatgatgctggccggaatggtggtggtgtttcccgccatgccaagaccaacggcttcattccaagctcgtttcgggccctttcgagttatctgagaattgtttcttctggggcttctactgttgccaggtcggcggtgtcggcggcctcttctattgcggagagggataatgatgccaaccatgatcaggtaaactgggctggatttgacaagttagagggggaaagaaatgtctaccggaaagttcttctgctgggttaccgctctggtttccaggtttgggatgttgaagaagcagataatgtccgtgacctggtttccacacatgatggtcctatttcatttatgcaaatcctacctaaaccaatagcatcaaagagatcggatgacaagtttgctgaaagccgtccattgctggtagtttgtgctgatgggtcaatttcagttgataataacatagaggatggcactgcccctcgcactggtgttactacaaacagccatgacaaagtgaatggtagttttgtgcctactgctgttcggttctattccttgagatcccaatcctatgttcatgtgctgaagttcagatcagctatttattctgtaaagtgcagttctcgagttgttgctatttctcaagcaactcagatacactgttttgatgcaacaacgttggagcgggaatatactattctcaccaatcctatagttacgggattccctggttctggaggtataagctgtggacctgttgcagtaggcaagagatggctagcttatagtggaagtcctgttgcagtaaccaattctgggcgcgttaatccacaacatctggcaccttccgctagttttccttcaaatgggagcctggttgctcactatgcaaaagagtcaagcaagcaactagctactgggattgcgaccttgggagacatggggtataagaagctgtcccagtactactcggagcttgtacctgatggtattacttatcctcaagcagggaatcctggccggaaagccaatggaactgtcaatggcctgtcaacagacacagatagtgttggaatggtcattgtcagagacattgtcagtaaagctgttattgcacagttcagggctcaccagagtcctatttctgcattatgctttgatcctagtggcacgcttttagtgtctgcttcggttcaggggcataacatcaatgtttttaagataatgcctggacctcctggagtctcctcttcaactgatgctgatgcatcttatgtacatctttacaggctacagcgcggaatgacgcatgcaattattcaggacattagtttcagtgacgacagtaactggattatggttagttcctctagggggaccagccatctgtttgctataaatccttggggaggaactgttgatattccaaattctgatgctagctttaatccaaaaaatactgtatcaggtgtcacaagtaggtcagcagttcgttggccacctaattcaggttcgcaaatgcctaatcagcagagcctctgttcatctggtcccccagttacactttctgttgttagtagaataagaaatggaaacaatagctggagaggcactgtaactggtgctgcggcagccgccactggcaagatgaattccctctctggggcaattgcttcctctttccataattgcaaaggcaatgattaccatgtggattccagctctttgaaggctaagtaccaccttttggtattttctccatctggttgcatgatacaatatgcattgcgaataccaaatggtctagatttaacaactgtgactggattaaacactgcttatgagtcagatcacgagtgtgatgcaagattagtagttgaagctatccagaagtggaacgtatgtcagaagcagaaccgaagagaacgggaggataatactgacatatatggtgagaatggaaatttagacaacaataagatatatcctgaagggatgaagaagggaaacacggtatatcctgaagcttggagttctgccacaaaagaaaagatcacccctgaggaaaaacatcatttgtatatttcagaagccgaactgcagatgcatgaaactcgaagtccactatgggcaagacctgagctatactttcagtcaatgattgtggaaggtgtgaagatggatggtgaaactgctacaggaggagaagttgagatcgaaaggattccgactcgcatgattgaagcaaggtcaaaggatttagtcccagtttttgactatcttcagactccagtgttccaacaaacaagggttgctgctgtgaatagcaatatcagtggccaacttcttcaacagaggtctgggatatctgaaaagggcaggctttcatgcagaagcagctcaaactctcttgataccaagactgacagcggtgctggactcgcagaacatcgcagtggtagtgaagaaactgggtggggtgttcctcagatgacaataggaagcacgggctctgtaaataaaaatgacagcccagagacaaagactcaacttgagactgtaaatagtagagagcacggctttaaaatggaggctcaactcaagtttgtaaataatgacatagaagaagacatgggaatggggaatctttttgaacagggaggtgatgagtgtgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

979

Amino Acids

106.21

Weight (kDa)

7.87

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1102
AccB7I CCANNNNNTGG 1 cut(s) 2008
AccBSI CCGCTC 2 cut(s) 528, 946
AccI GTMKAC 1 cut(s) 498
AccII CGCG 2 cut(s) 1083, 1560
AclI AACGTT 1 cut(s) 938
AclWI GGATC 2 cut(s) 816, 1415
AcoI YGGCCR 5 cut(s) 35, 274, 1279, 1757, 2599
AcsI RAATTY 3 cut(s) 1690, 1912, 2224
AcuI CTGAAG 4 cut(s) 866, 2271, 2304, 2528
AfaI GTAC 5 cut(s) 132, 1226, 1242, 1539, 2000
AjnI CCWGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
AjuI GAANNNNNNNTTGG 2 cut(s) 819, 851
AleI CACNNNNGTG 1 cut(s) 2118
Alw21I GWGCWC 2 cut(s) 96, 2838
Alw26I GTCTC 6 cut(s) 20, 1191, 1344, 1510, 2792, 2810
AlwI GGATC 2 cut(s) 816, 1415
AlwNI CAGNNNCTG 1 cut(s) 1611
Ama87I CYCGRG 1 cut(s) 885
AoxI GGCC 8 cut(s) 35, 274, 339, 408, 1279, 1306, 1757, 2599
ApaI GGGCCC 1 cut(s) 343
ApeKI GCWGC 4 cut(s) 1886, 1892, 2576, 2658
ApoI RAATTY 3 cut(s) 1690, 1912, 2224
Asp700I GAANNNNTTC 2 cut(s) 364, 2484
AspLEI GCGC 3 cut(s) 151, 1083, 1560
AspS9I GGNCC 7 cut(s) 339, 340, 596, 1013, 1493, 1638, 1811
AsuHPI GGTGA 6 cut(s) 955, 1382, 2225, 2308, 2459, 2936
AsuNHI GCTAGC 2 cut(s) 1039, 1700
AvaI CYCGRG 1 cut(s) 885
AvaII GGWCC 5 cut(s) 596, 1013, 1493, 1638, 1811
AxyI CCTNAGG 1 cut(s) 2322
BaeGI GKGCMC 1 cut(s) 343
BalI TGGCCA 3 cut(s) 37, 1759, 2601
BanI GGYRCC 1 cut(s) 1102
BanII GRGCYC 4 cut(s) 96, 343, 1390, 2774
BarI GAAGNNNNNNTAC 2 cut(s) 1982, 2014
BauI CACGAG 1 cut(s) 2114
BbsI GAAGAC 1 cut(s) 2895
Bbv12I GWGCWC 2 cut(s) 96, 2838
BbvI GCAGC 4 cut(s) 1873, 1904, 2563, 2670
BccI CCATC 9 cut(s) 587, 689, 722, 1029, 1241, 1653, 2029, 2434, 2438
BceAI ACGGC 4 cut(s) 56, 331, 654, 2854
BcgI CGANNNNNNTGC 4 cut(s) 2105, 2139, 2357, 2391
BciT130I CCWGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
BclI TGATCA 1 cut(s) 448
BcoDI GTCTC 6 cut(s) 20, 1191, 1344, 1510, 2792, 2810
BfaI CTAG 7 cut(s) 1040, 1113, 1172, 1425, 1632, 1701, 2066
BfmI CTRYAG 4 cut(s) 972, 1553, 2360, 2457
BglI GCCNNNNNGGC 1 cut(s) 395
BisI GCNGC 7 cut(s) 408, 1887, 1890, 1893, 1896, 2577, 2659
BlsI GCNGC 7 cut(s) 409, 1888, 1891, 1894, 1897, 2578, 2660
BmcAI AGTACT 1 cut(s) 1226
Bme1390I CCNGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
Bme18I GGWCC 5 cut(s) 596, 1013, 1493, 1638, 1811
BmeT110I CYCGRG 1 cut(s) 885
BmgT120I GGNCC 7 cut(s) 339, 340, 596, 1013, 1493, 1638, 1811
BmiI GGNNCC 6 cut(s) 144, 341, 1104, 1133, 1639, 1813
BmrFI CCNGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
BmrI ACTGGG 6 cut(s) 469, 1188, 1216, 1811, 2522, 2742
BmtI GCTAGC 2 cut(s) 1043, 1704
BmuI ACTGGG 6 cut(s) 469, 1188, 1216, 1811, 2522, 2742
BpiI GAAGAC 1 cut(s) 2895
BplI GAGNNNNNCTC 2 cut(s) 110, 142
BpmI CTGGAG 4 cut(s) 1017, 1521, 1885, 2535
Bpu10I CCTNAGC 1 cut(s) 2400
BpuEI CTTGAG 5 cut(s) 838, 888, 1248, 2834, 2846
BsaBI GATNNNNATC 1 cut(s) 826
BsaJI CCNNGG 5 cut(s) 38, 138, 988, 1191, 1664
BsaWI WCCGGW 1 cut(s) 501
BsaXI ACNNNNNCTCC 4 cut(s) 1662, 1692, 2454, 2484
Bse21I CCTNAGG 1 cut(s) 2322
Bse3DI GCAATG 3 cut(s) 674, 1966, 2045
Bse8I GATNNNNATC 1 cut(s) 826
BseBI CCWGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
BseDI CCNNGG 5 cut(s) 38, 138, 988, 1191, 1664
BseGI GGATG 6 cut(s) 264, 553, 655, 733, 2262, 2449
BseJI GATNNNNATC 1 cut(s) 826
BseMI GCAATG 3 cut(s) 674, 1966, 2045
BseMII CTCAG 5 cut(s) 347, 926, 2313, 2391, 2762
BseRI GAGGAG 2 cut(s) 1498, 2478
BseSI GKGCMC 1 cut(s) 343
BseXI GCAGC 4 cut(s) 1873, 1904, 2563, 2670
BseYI CCCAGC 1 cut(s) 517
BsgI GTGCAG 1 cut(s) 898
Bsh1236I CGCG 2 cut(s) 1083, 1560
BshFI GGCC 8 cut(s) 37, 276, 341, 410, 1281, 1308, 1759, 2601
BshNI GGYRCC 1 cut(s) 1102
BsiHKAI GWGCWC 2 cut(s) 96, 2838
BsiHKCI CYCGRG 1 cut(s) 885
BsiSI CCGG 5 cut(s) 9, 146, 277, 502, 1282
BslFI GGGAC 4 cut(s) 1204, 1651, 1797, 2510
BsmAI GTCTC 6 cut(s) 20, 1191, 1344, 1510, 2792, 2810
BsmFI GGGAC 4 cut(s) 1204, 1651, 1797, 2510
BsnI GGCC 8 cut(s) 37, 276, 341, 410, 1281, 1308, 1759, 2601
BsoBI CYCGRG 1 cut(s) 885
Bsp120I GGGCCC 1 cut(s) 339
Bsp1286I GDGCHC 5 cut(s) 96, 343, 1390, 2774, 2838
Bsp1407I TGTACA 1 cut(s) 1537
Bsp143I GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
BspANI GGCC 8 cut(s) 37, 276, 341, 410, 1281, 1308, 1759, 2601
BspCNI CTCAG 5 cut(s) 348, 925, 2314, 2392, 2761
BspFNI CGCG 2 cut(s) 1083, 1560
BspLI GGNNCC 6 cut(s) 144, 341, 1104, 1133, 1639, 1813
BspMAI CTGCAG 1 cut(s) 2364
BspOI GCTAGC 2 cut(s) 1043, 1704
BspPI GGATC 2 cut(s) 816, 1415
BspT107I GGYRCC 1 cut(s) 1102
BsrBI CCGCTC 2 cut(s) 528, 946
BsrDI GCAATG 3 cut(s) 674, 1966, 2045
BsrGI TGTACA 1 cut(s) 1537
BssECI CCNNGG 5 cut(s) 38, 138, 988, 1191, 1664
BssMI GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
BssSI CACGAG 1 cut(s) 2114
BssT1I CCWWGG 2 cut(s) 1191, 1664
Bst2BI CACGAG 1 cut(s) 2114
Bst2UI CCWGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
Bst6I CTCTTC 3 cut(s) 418, 1516, 2176
BstAUI TGTACA 1 cut(s) 1537
BstC8I GCNNGC 7 cut(s) 274, 1041, 1166, 1433, 1572, 1702, 2642
BstDEI CTNAG 6 cut(s) 356, 912, 1995, 2322, 2400, 2748
BstDSI CCRYGG 1 cut(s) 38
BstEII GGTNACC 1 cut(s) 521
BstENI CCTNNNNNAGG 3 cut(s) 1266, 1668, 1767
BstF5I GGATG 6 cut(s) 264, 553, 655, 733, 2262, 2449
BstFNI CGCG 2 cut(s) 1083, 1560
BstHHI GCGC 3 cut(s) 151, 1083, 1560
BstKTI GATC 9 cut(s) 228, 451, 647, 824, 857, 1423, 2113, 2316, 2478
BstMAI GTCTC 6 cut(s) 20, 1191, 1344, 1510, 2792, 2810
BstMBI GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
BstNI CCWGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
BstNSI RCATGY 1 cut(s) 1574
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
BstSFI CTRYAG 4 cut(s) 972, 1553, 2360, 2457
BstSLI GKGCMC 1 cut(s) 343
BstUI CGCG 2 cut(s) 1083, 1560
BstV1I GCAGC 4 cut(s) 1873, 1904, 2563, 2670
BstV2I GAAGAC 1 cut(s) 2895
BstX2I RGATCY 1 cut(s) 821
BstYI RGATCY 1 cut(s) 821
Bsu36I CCTNAGG 1 cut(s) 2322
BsuRI GGCC 8 cut(s) 37, 276, 341, 410, 1281, 1308, 1759, 2601
BtgI CCRYGG 1 cut(s) 38
BtgZI GCGATG 1 cut(s) 2696
BtsCI GGATG 6 cut(s) 264, 553, 655, 733, 2262, 2449
BtsI GCAGTG 3 cut(s) 732, 2094, 2722
Cac8I GCNNGC 7 cut(s) 274, 1041, 1166, 1433, 1572, 1702, 2642
CaiI CAGNNNCTG 1 cut(s) 1611
CfoI GCGC 3 cut(s) 151, 1083, 1560
Cfr13I GGNCC 7 cut(s) 339, 340, 596, 1013, 1493, 1638, 1811
CseI GACGC 1 cut(s) 1576
CsiI ACCWGGT 1 cut(s) 576
Csp6I GTAC 5 cut(s) 131, 1225, 1241, 1538, 1999
CspCI CAANNNNNGTGG 4 cut(s) 2406, 2441, 2578, 2613
CviQI GTAC 5 cut(s) 131, 1225, 1241, 1538, 1999
DdeI CTNAG 6 cut(s) 356, 912, 1995, 2322, 2400, 2748
DpnI GATC 9 cut(s) 227, 450, 646, 823, 856, 1422, 2112, 2315, 2477
DpnII GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
DraI TTTAAA 1 cut(s) 2845
EaeI YGGCCR 5 cut(s) 35, 274, 1279, 1757, 2599
Eam1104I CTCTTC 3 cut(s) 418, 1516, 2176
EarI CTCTTC 3 cut(s) 418, 1516, 2176
Ecl136II GAGCTC 1 cut(s) 94
Eco130I CCWWGG 2 cut(s) 1191, 1664
Eco24I GRGCYC 4 cut(s) 96, 343, 1390, 2774
Eco32I GATATC 1 cut(s) 2628
Eco47I GGWCC 5 cut(s) 596, 1013, 1493, 1638, 1811
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 4 cut(s) 866, 2271, 2304, 2528
Eco81I CCTNAGG 1 cut(s) 2322
Eco88I CYCGRG 1 cut(s) 885
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 1 cut(s) 94
EcoNI CCTNNNNNAGG 3 cut(s) 1266, 1668, 1767
EcoO109I RGGNCCY 1 cut(s) 340
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 1 cut(s) 1912
EcoRII CCWGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
EcoRV GATATC 1 cut(s) 2628
EcoT14I CCWWGG 2 cut(s) 1191, 1664
EcoT22I ATGCAT 3 cut(s) 1531, 2047, 2370
EcoT38I GRGCYC 4 cut(s) 96, 343, 1390, 2774
ErhI CCWWGG 2 cut(s) 1191, 1664
FaqI GGGAC 4 cut(s) 1204, 1651, 1797, 2510
FauI CCCGC 3 cut(s) 27, 305, 939
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 7 cut(s) 408, 1887, 1890, 1893, 1896, 2577, 2659
FokI GGATG 6 cut(s) 271, 560, 662, 740, 2269, 2456
FriOI GRGCYC 4 cut(s) 96, 343, 1390, 2774
Fsp4HI GCNGC 7 cut(s) 408, 1887, 1890, 1893, 1896, 2577, 2659
FspBI CTAG 7 cut(s) 1040, 1113, 1172, 1425, 1632, 1701, 2066
GlaI GCGC 3 cut(s) 150, 1082, 1559
GluI GCNGC 7 cut(s) 408, 1887, 1890, 1893, 1896, 2577, 2659
GsaI CCCAGC 1 cut(s) 521
GsuI CTGGAG 4 cut(s) 1017, 1521, 1885, 2535
HaeIII GGCC 8 cut(s) 37, 276, 341, 410, 1281, 1308, 1759, 2601
HapII CCGG 5 cut(s) 9, 146, 277, 502, 1282
HgaI GACGC 1 cut(s) 1576
HhaI GCGC 3 cut(s) 151, 1083, 1560
Hin6I GCGC 3 cut(s) 149, 1081, 1558
HinP1I GCGC 3 cut(s) 149, 1081, 1558
HincII GTYRAC 1 cut(s) 1314
HindII GTYRAC 1 cut(s) 1314
HindIII AAGCTT 1 cut(s) 2286
HpaII CCGG 5 cut(s) 9, 146, 277, 502, 1282
HphI GGTGA 6 cut(s) 955, 1382, 2225, 2308, 2459, 2936
Hpy166II GTNNAC 5 cut(s) 457, 499, 1013, 1314, 2384
Hpy8I GTNNAC 5 cut(s) 457, 499, 1013, 1314, 2384
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 6 cut(s) 1116, 1131, 1984, 2246, 2257, 2423
HpyCH4IV ACGT 2 cut(s) 938, 2160
HpyF3I CTNAG 6 cut(s) 356, 912, 1995, 2322, 2400, 2748
HpySE526I ACGT 2 cut(s) 938, 2160
HspAI GCGC 3 cut(s) 149, 1081, 1558
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
LmnI GCTCC 4 cut(s) 99, 943, 1131, 1234
Lsp1109I GCAGC 4 cut(s) 1873, 1904, 2563, 2670
MabI ACCWGGT 1 cut(s) 576
MaeI CTAG 7 cut(s) 1040, 1113, 1172, 1425, 1632, 1701, 2066
MaeII ACGT 2 cut(s) 938, 2160
MalI GATC 9 cut(s) 227, 450, 646, 823, 856, 1422, 2112, 2315, 2477
MbiI CCGCTC 2 cut(s) 528, 946
MboI GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
MfeI CAATTG 1 cut(s) 1929
MflI RGATCY 1 cut(s) 821
MhlI GDGCHC 5 cut(s) 96, 343, 1390, 2774, 2838
MlsI TGGCCA 3 cut(s) 37, 1759, 2601
MluNI TGGCCA 3 cut(s) 37, 1759, 2601
MlyI GAGTC 9 cut(s) 157, 1166, 1405, 1512, 2114, 2485, 2542, 2694, 2800
MmeI TCCRAC 4 cut(s) 921, 1312, 2513, 2584
Mox20I TGGCCA 3 cut(s) 37, 1759, 2601
Mph1103I ATGCAT 3 cut(s) 1531, 2047, 2370
MroXI GAANNNNTTC 2 cut(s) 364, 2484
MscI TGGCCA 3 cut(s) 37, 1759, 2601
MseI TTAA 7 cut(s) 200, 1086, 1479, 1707, 2072, 2090, 2844
MslI CAYNNNNRTG 3 cut(s) 2118, 2715, 2897
Msp20I TGGCCA 3 cut(s) 37, 1759, 2601
MspA1I CMGCKG 1 cut(s) 2691
MspI CCGG 5 cut(s) 9, 146, 277, 502, 1282
MspR9I CCNGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
MunI CAATTG 1 cut(s) 1929
MvaI CCWGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
MvnI CGCG 2 cut(s) 1083, 1560
NdeII GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
NheI GCTAGC 2 cut(s) 1039, 1700
NlaIV GGNNCC 6 cut(s) 144, 341, 1104, 1133, 1639, 1813
NmeAIII GCCGAG 1 cut(s) 142
NmuCI GTSAC 4 cut(s) 572, 1598, 1732, 2080
NsiI ATGCAT 3 cut(s) 1531, 2047, 2370
NspI RCATGY 1 cut(s) 1574
OliI CACNNNNGTG 1 cut(s) 2118
PaeI GCATGC 1 cut(s) 1574
PaeR7I CTCGAG 1 cut(s) 885
PcsI WCGNNNNNNNCGW 1 cut(s) 164
PdmI GAANNNNTTC 2 cut(s) 364, 2484
PfeI GAWTC 5 cut(s) 984, 1273, 1976, 2485, 2905
PflFI GACNNNGTC 1 cut(s) 1355
PflMI CCANNNNNTGG 1 cut(s) 2008
PfoI TCCNGGA 1 cut(s) 1498
PkrI GCNGC 7 cut(s) 409, 1888, 1891, 1894, 1897, 2578, 2660
PleI GAGTC 9 cut(s) 157, 1165, 1404, 1511, 2113, 2485, 2542, 2694, 2800
PpsI GAGTC 9 cut(s) 157, 1165, 1404, 1511, 2113, 2485, 2542, 2694, 2800
Psp124BI GAGCTC 1 cut(s) 96
Psp1406I AACGTT 1 cut(s) 938
Psp6I CCWGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
PspEI GGTNACC 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 517
PspGI CCWGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
PspN4I GGNNCC 6 cut(s) 144, 341, 1104, 1133, 1639, 1813
PspOMI GGGCCC 1 cut(s) 339
PspPI GGNCC 7 cut(s) 339, 340, 596, 1013, 1493, 1638, 1811
PstI CTGCAG 1 cut(s) 2364
PstNI CAGNNNCTG 1 cut(s) 1611
PsuI RGATCY 1 cut(s) 821
PsyI GACNNNGTC 1 cut(s) 1355
RsaI GTAC 5 cut(s) 132, 1226, 1242, 1539, 2000
RsaNI GTAC 5 cut(s) 131, 1225, 1241, 1538, 1999
RseI CAYNNNNRTG 3 cut(s) 2118, 2715, 2897
SacI GAGCTC 1 cut(s) 96
SaqAI TTAA 7 cut(s) 200, 1086, 1479, 1707, 2072, 2090, 2844
SatI GCNGC 7 cut(s) 408, 1887, 1890, 1893, 1896, 2577, 2659
Sau3AI GATC 9 cut(s) 225, 448, 644, 821, 854, 1420, 2110, 2313, 2475
Sau96I GGNCC 7 cut(s) 339, 340, 596, 1013, 1493, 1638, 1811
ScaI AGTACT 1 cut(s) 1226
SchI GAGTC 9 cut(s) 157, 1166, 1405, 1512, 2114, 2485, 2542, 2694, 2800
ScrFI CCNGG 8 cut(s) 391, 539, 578, 990, 1136, 1278, 1491, 1500
SduI GDGCHC 5 cut(s) 96, 343, 1390, 2774, 2838
SexAI ACCWGGT 1 cut(s) 576
SfcI CTRYAG 4 cut(s) 972, 1553, 2360, 2457
Sfr274I CTCGAG 1 cut(s) 885
SinI GGWCC 5 cut(s) 596, 1013, 1493, 1638, 1811
SlaI CTCGAG 1 cut(s) 885
SmiMI CAYNNNNRTG 3 cut(s) 2118, 2715, 2897
SmlI CTYRAG 6 cut(s) 817, 885, 903, 1263, 2813, 2861
SmoI CTYRAG 6 cut(s) 817, 885, 903, 1263, 2813, 2861
SphI GCATGC 1 cut(s) 1574
SspMI CTAG 7 cut(s) 1040, 1113, 1172, 1425, 1632, 1701, 2066
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 8 cut(s) 389, 537, 576, 988, 1134, 1276, 1489, 1498
StyI CCWWGG 2 cut(s) 1191, 1664
TaiI ACGT 2 cut(s) 941, 2163
TaqI TCGA 5 cut(s) 60, 347, 886, 2377, 2478
TatI WGTACW 2 cut(s) 1224, 1537
TauI GCSGC 3 cut(s) 410, 1892, 1898
TfiI GAWTC 5 cut(s) 984, 1273, 1976, 2485, 2905
Tru1I TTAA 7 cut(s) 200, 1086, 1479, 1707, 2072, 2090, 2844
Tru9I TTAA 7 cut(s) 200, 1086, 1479, 1707, 2072, 2090, 2844
TseFI GTSAC 4 cut(s) 572, 1598, 1732, 2080
TseI GCWGC 4 cut(s) 1886, 1892, 2576, 2658
Tsp45I GTSAC 4 cut(s) 572, 1598, 1732, 2080
TspGWI ACGGA 2 cut(s) 156, 560
Tth111I GACNNNGTC 1 cut(s) 1355
Van91I CCANNNNNTGG 1 cut(s) 2008
VpaK11BI GGWCC 5 cut(s) 596, 1013, 1493, 1638, 1811
XagI CCTNNNNNAGG 3 cut(s) 1266, 1668, 1767
XapI RAATTY 3 cut(s) 1690, 1912, 2224
XbaI TCTAGA 1 cut(s) 2065
XceI RCATGY 1 cut(s) 1574
XhoI CTCGAG 1 cut(s) 885
XmiI GTMKAC 1 cut(s) 498
XmnI GAANNNNTTC 2 cut(s) 364, 2484
XspI CTAG 7 cut(s) 1040, 1113, 1172, 1425, 1632, 1701, 2066
ZrmI AGTACT 1 cut(s) 1226
Zsp2I ATGCAT 3 cut(s) 1531, 2047, 2370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.