Rh5BG255600

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0006822
Physical Location & Seq
Reverse (-)
31745467 .. 31753985
8519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG255600.1

Sequence Viewer

Length: 2331 bp
ATGCAAATCCTACCTAAACCAATAGCATCAAAGAGATCGGATGACAAGTTTGCTGAAAGCCGTCCATTGCTGGTAGTTTGTGCTGATGGGTCAATTTCTGTTGATAATAACATAGAGGATGGCACTGCCCCTCGCAATGGTGTTACTACAAACAGCCATGACAAAGTGAACGGTAGTTTTGTGCCTACTGCTGTTCGGTTCTATTCCTTGAGATCCCAATCCTATGTTCATGTGCTGAAGTTCAGATCAGCTATTTATTCTGTAAAGTGCAGTTCTCGAGTTGTTGCTATTTCTCAAGCAACTCAGATACACTGTTTTGATGCAACAACGTTGGAGCGGGAATATACTATTCTCACCAATCCTATAGTTACGGGATTCCCTGGTTCTGGAGGTATAAGCTGTGGACCTGTTGCAGTAGGCAAGAGATGGCTAGCTTATAGTGGAAGTCCTGTTGCAGTAACCAATTCTGGGCGCGTTAATCCACAACATCTGGCACCTTCCGCTAGTTTTCCTTCAAATGGGAGCCTGGTTGCTCACTATGCAAAAGAGTCAAGCAAGCAACTAGCTACTGGGATTGCGACCTTGGGAGACATGGGGTATAAGAAGCTGTCCCAGTACTACTCGGAGCTTGTACCTGATGGTATTACTTATCCTCAAGCAGGGAATCCTGGCCGGAAACCCAATGGAACTGTCAATGGCCTGTCAACAGACACAGATAGTGTTGGAATGGTCATTGTCAGAGACATTGTCAGTAAAGCTGTTATTGCACAGTTCAGGGCTCACCAGAGTCCTATTTCTGCATTATGCTTTGATCCTAGTGGCACACTTTTAGTGTCTGCTTCGGTTCAGGGGCATAACATCAATGTTTTTAAGATAATGCCTGGACCTCCTGGAGTCTCCTCTTCAACTGATGCTGATGCATCTTATGTACATCTTTACAGGCTACAGCGCGGAATGACACATGCAATTATTCAGGACATTAGTTTCAGTGACGACAGCAACTGGATTATGGTTAGTTCCTCTAGGGGGACCAGCCATCTGTTTGCTATAAATCCTTGGGGAGGAACTGTTGATATTCCAAATTCTGATGCTAGCTTTAATCCAAAAAATACTGTATCAGGTGTCACAACTAGGTCAGCAGTTCGTTGGCCACCTAATTCAGGTTCGCAAATGCCTAATCAGCAGAGCCTCTGTTCATCTGGTCCCCCAGTTACACTTTCTGTTGTTAGTAGAATAAGAAATGGAAACAATAGCTGGAGAGGCACTGTAACTGGTGCTGCGGCAGCCGCCACTGGCAAGATGAATTCCCTCTCTGGGGCAATTGCTTCCTCTTTCCATAATTGCAAAGGCAATGATTACCATGTGGATTCCAGCTCTTTGAAGGCTAAGTACCACCTTTTGGTATTTTCTCCATCTGGTTGCATGATACAATATGCATTGCGAATACCAAATGGTCTAGATTTAACAACTGTGACTGGATTAAACACTGCTTATGAGTCAGATCACGAGTGTGATGCAAGATTAGTAGTTGAAGCTATCCAGAAGTGGAACGTATGTCAGAAGCAGAACCGAAGAGAACGGGAGGATAATACTGACATATATGGTGAGAATGGAAATTTAGACAACAATAAGATATATCCTGAAGGGATGAAGAAGGGAAACACAGTATATCCTGAAGCTTGGAGTTCTGCCACAAAAGAAAAGATCACCCCTGAGGAAAAACATCATTTGTATATTTCAGAAGCCGAACTGCAGATGCATGAAACTCGAAGTCCACTATGGGCAAGACCTGAGCTATACTTTCAGTCAATGATTGTGGAAGGTGTGAAGATGGATGGTGAAACTGCTACAGGAGGAGAAATTGAGATCGAAAGGATTCCGACTCGCATGATTGAAGCAAGGTCAAAGGATTTAGTCCCAGTTTTTGACTATCTTCAGACTCCAGTGTTCCAACAAACAAGGGTTGCTGCTGTGAATAGCAATATCAGTGGGCAACTTCTTCAACAGAGGTCTGGGATATCTGAAAAGGGCAGGCTTTCATGCAGAAGCAGCTCAAACTCTCTTGATACCAAGACTGACAGCGGCGCTGGACTCGCAGAACATCGCAGTGGTAGTGAAGAAACTGGGTGGGGTGTTCCTCAGATGACAATAGGAAGCACGGGCTCTGTAAATAAAAATGACAGCCCAGAGACAAAGACTCAACTTGAGACTGTAAATAGTAGAGAGCACGGCTTTAAAATGGAGGCTCAACTCAAGTTTGTAAATAATGACATAGAAGAAGACATGGGAATGGGGAATCTTTTTGAACAGGGAGGTGATGAGTGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

776

Amino Acids

83.96

Weight (kDa)

6.46

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCAS3_WD40 PF21034 2 - 356 1.2e-39 BCAS3, WD40 repeat
PROPPIN PF21032 242 - 351 6.1e-06 PROPPIN
BCAS3 PF12490 498 - 643 2.5e-55 BCAS3 microtubule associated cell migration factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 493
AccB7I CCANNNNNTGG 1 cut(s) 1399
AccBSI CCGCTC 1 cut(s) 337
AccII CGCG 2 cut(s) 474, 951
AciI CCGC 6 cut(s) 337, 501, 951, 1280, 1287, 2082
AclI AACGTT 1 cut(s) 329
AclWI GGATC 2 cut(s) 207, 806
AcoI YGGCCR 2 cut(s) 670, 1148
AcsI RAATTY 3 cut(s) 1081, 1303, 1615
AcuI CTGAAG 4 cut(s) 257, 1662, 1695, 1919
AfaI GTAC 4 cut(s) 617, 633, 930, 1391
AgsI TTSAA 7 cut(s) 516, 906, 1381, 1532, 1895, 2003, 2306
AjnI CCWGG 5 cut(s) 379, 525, 667, 880, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 210, 242
AleI CACNNNNGTG 1 cut(s) 1509
Alw21I GWGCWC 1 cut(s) 2229
Alw26I GTCTC 5 cut(s) 582, 735, 901, 2183, 2201
AlwI GGATC 2 cut(s) 207, 806
AlwNI CAGNNNCTG 1 cut(s) 1002
Ama87I CYCGRG 1 cut(s) 276
AoxI GGCC 3 cut(s) 670, 697, 1148
ApeKI GCWGC 4 cut(s) 1277, 1283, 1967, 2049
ApoI RAATTY 3 cut(s) 1081, 1303, 1615
Asp700I GAANNNNTTC 1 cut(s) 1875
AspLEI GCGC 3 cut(s) 474, 951, 2087
AspS9I GGNCC 4 cut(s) 404, 884, 1029, 1202
AsuHPI GGTGA 6 cut(s) 346, 773, 1616, 1699, 1850, 2327
AsuNHI GCTAGC 2 cut(s) 430, 1091
AvaI CYCGRG 1 cut(s) 276
AvaII GGWCC 4 cut(s) 404, 884, 1029, 1202
AxyI CCTNAGG 1 cut(s) 1713
BalI TGGCCA 1 cut(s) 1150
BanI GGYRCC 1 cut(s) 493
BanII GRGCYC 2 cut(s) 781, 2165
BarI GAAGNNNNNNTAC 2 cut(s) 1373, 1405
BauI CACGAG 1 cut(s) 1505
BbsI GAAGAC 1 cut(s) 2286
Bbv12I GWGCWC 1 cut(s) 2229
BbvI GCAGC 4 cut(s) 1264, 1295, 1954, 2061
BccI CCATC 8 cut(s) 80, 113, 420, 632, 1044, 1420, 1825, 1829
BceAI ACGGC 2 cut(s) 45, 2245
BcgI CGANNNNNNTGC 4 cut(s) 1496, 1530, 1748, 1782
BciT130I CCWGG 5 cut(s) 381, 527, 669, 882, 891
BcoDI GTCTC 5 cut(s) 582, 735, 901, 2183, 2201
BfaI CTAG 8 cut(s) 431, 504, 563, 816, 1023, 1092, 1131, 1457
BfmI CTRYAG 4 cut(s) 363, 944, 1751, 1848
BfoI RGCGCY 1 cut(s) 2088
BisI GCNGC 7 cut(s) 1278, 1281, 1284, 1287, 1968, 2050, 2083
BlsI GCNGC 7 cut(s) 1279, 1282, 1285, 1288, 1969, 2051, 2084
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 5 cut(s) 381, 527, 669, 882, 891
Bme18I GGWCC 4 cut(s) 404, 884, 1029, 1202
BmeT110I CYCGRG 1 cut(s) 276
BmgT120I GGNCC 4 cut(s) 404, 884, 1029, 1202
BmiI GGNNCC 4 cut(s) 495, 524, 1030, 1204
BmrFI CCNGG 5 cut(s) 381, 527, 669, 882, 891
BmrI ACTGGG 5 cut(s) 579, 607, 1202, 1913, 2133
BmsI GCATC 8 cut(s) 35, 310, 901, 907, 929, 1078, 1504, 1746
BmtI GCTAGC 2 cut(s) 434, 1095
BmuI ACTGGG 5 cut(s) 579, 607, 1202, 1913, 2133
BpiI GAAGAC 1 cut(s) 2286
BpmI CTGGAG 4 cut(s) 408, 912, 1276, 1926
Bpu10I CCTNAGC 1 cut(s) 1791
BpuEI CTTGAG 5 cut(s) 229, 279, 639, 2225, 2237
BsaBI GATNNNNATC 1 cut(s) 217
BsaJI CCNNGG 3 cut(s) 379, 582, 1055
BsaXI ACNNNNNCTCC 2 cut(s) 1053, 1083
Bse21I CCTNAGG 1 cut(s) 1713
Bse3DI GCAATG 4 cut(s) 65, 142, 1357, 1436
Bse8I GATNNNNATC 1 cut(s) 217
BseBI CCWGG 5 cut(s) 381, 527, 669, 882, 891
BseDI CCNNGG 3 cut(s) 379, 582, 1055
BseGI GGATG 4 cut(s) 46, 124, 1653, 1840
BseJI GATNNNNATC 1 cut(s) 217
BseMI GCAATG 4 cut(s) 65, 142, 1357, 1436
BseMII CTCAG 4 cut(s) 317, 1704, 1782, 2153
BseRI GAGGAG 2 cut(s) 889, 1869
BseXI GCAGC 4 cut(s) 1264, 1295, 1954, 2061
BsgI GTGCAG 1 cut(s) 289
Bsh1236I CGCG 2 cut(s) 474, 951
BshFI GGCC 3 cut(s) 672, 699, 1150
BshNI GGYRCC 1 cut(s) 493
BsiHKAI GWGCWC 1 cut(s) 2229
BsiHKCI CYCGRG 1 cut(s) 276
BsiSI CCGG 1 cut(s) 673
BslFI GGGAC 4 cut(s) 595, 1042, 1188, 1901
BsmAI GTCTC 5 cut(s) 582, 735, 901, 2183, 2201
BsmFI GGGAC 4 cut(s) 595, 1042, 1188, 1901
BsnI GGCC 3 cut(s) 672, 699, 1150
BsoBI CYCGRG 1 cut(s) 276
Bsp1286I GDGCHC 3 cut(s) 781, 2165, 2229
Bsp1407I TGTACA 1 cut(s) 928
Bsp143I GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
BspACI CCGC 6 cut(s) 337, 501, 951, 1280, 1287, 2082
BspANI GGCC 3 cut(s) 672, 699, 1150
BspCNI CTCAG 4 cut(s) 316, 1705, 1783, 2152
BspFNI CGCG 2 cut(s) 474, 951
BspLI GGNNCC 4 cut(s) 495, 524, 1030, 1204
BspMAI CTGCAG 1 cut(s) 1755
BspOI GCTAGC 2 cut(s) 434, 1095
BspPI GGATC 2 cut(s) 207, 806
BspT107I GGYRCC 1 cut(s) 493
BsrBI CCGCTC 1 cut(s) 337
BsrDI GCAATG 4 cut(s) 65, 142, 1357, 1436
BsrGI TGTACA 1 cut(s) 928
BssECI CCNNGG 3 cut(s) 379, 582, 1055
BssMI GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
BssSI CACGAG 1 cut(s) 1505
BssT1I CCWWGG 2 cut(s) 582, 1055
Bst2BI CACGAG 1 cut(s) 1505
Bst2UI CCWGG 5 cut(s) 381, 527, 669, 882, 891
Bst6I CTCTTC 2 cut(s) 907, 1567
BstAUI TGTACA 1 cut(s) 928
BstC8I GCNNGC 4 cut(s) 432, 557, 1093, 2033
BstDEI CTNAG 5 cut(s) 303, 1386, 1713, 1791, 2139
BstENI CCTNNNNNAGG 3 cut(s) 657, 1059, 1158
BstF5I GGATG 4 cut(s) 46, 124, 1653, 1840
BstFNI CGCG 2 cut(s) 474, 951
BstH2I RGCGCY 1 cut(s) 2088
BstHHI GCGC 3 cut(s) 474, 951, 2087
BstKTI GATC 7 cut(s) 38, 215, 248, 814, 1504, 1707, 1869
BstMAI GTCTC 5 cut(s) 582, 735, 901, 2183, 2201
BstMBI GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
BstMWI GCNNNNNNNGC 9 cut(s) 500, 539, 764, 1180, 1260, 1283, 1286, 2049, 2093
BstNI CCWGG 5 cut(s) 381, 527, 669, 882, 891
BstNSI RCATGY 1 cut(s) 965
BstSCI CCNGG 5 cut(s) 379, 525, 667, 880, 889
BstSFI CTRYAG 4 cut(s) 363, 944, 1751, 1848
BstUI CGCG 2 cut(s) 474, 951
BstV1I GCAGC 4 cut(s) 1264, 1295, 1954, 2061
BstV2I GAAGAC 1 cut(s) 2286
BstX2I RGATCY 1 cut(s) 212
BstYI RGATCY 1 cut(s) 212
Bsu36I CCTNAGG 1 cut(s) 1713
BsuRI GGCC 3 cut(s) 672, 699, 1150
BtgZI GCGATG 1 cut(s) 2087
BtsCI GGATG 4 cut(s) 46, 124, 1653, 1840
BtsI GCAGTG 3 cut(s) 123, 1485, 2113
BtsIMutI CAGTG 9 cut(s) 123, 310, 994, 1263, 1290, 1485, 1950, 1993, 2113
Cac8I GCNNGC 4 cut(s) 432, 557, 1093, 2033
CaiI CAGNNNCTG 1 cut(s) 1002
CfoI GCGC 3 cut(s) 474, 951, 2087
Cfr13I GGNCC 4 cut(s) 404, 884, 1029, 1202
Csp6I GTAC 4 cut(s) 616, 632, 929, 1390
CspCI CAANNNNNGTGG 4 cut(s) 1797, 1832, 1969, 2004
CviQI GTAC 4 cut(s) 616, 632, 929, 1390
DdeI CTNAG 5 cut(s) 303, 1386, 1713, 1791, 2139
DpnI GATC 7 cut(s) 37, 214, 247, 813, 1503, 1706, 1868
DpnII GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
DraI TTTAAA 1 cut(s) 2236
EaeI YGGCCR 2 cut(s) 670, 1148
Eam1104I CTCTTC 2 cut(s) 907, 1567
EarI CTCTTC 2 cut(s) 907, 1567
Eco130I CCWWGG 2 cut(s) 582, 1055
Eco24I GRGCYC 2 cut(s) 781, 2165
Eco32I GATATC 1 cut(s) 2019
Eco47I GGWCC 4 cut(s) 404, 884, 1029, 1202
Eco57I CTGAAG 4 cut(s) 257, 1662, 1695, 1919
Eco81I CCTNAGG 1 cut(s) 1713
Eco88I CYCGRG 1 cut(s) 276
EcoNI CCTNNNNNAGG 3 cut(s) 657, 1059, 1158
EcoRI GAATTC 1 cut(s) 1303
EcoRII CCWGG 5 cut(s) 379, 525, 667, 880, 889
EcoRV GATATC 1 cut(s) 2019
EcoT14I CCWWGG 2 cut(s) 582, 1055
EcoT22I ATGCAT 3 cut(s) 922, 1438, 1761
EcoT38I GRGCYC 2 cut(s) 781, 2165
ErhI CCWWGG 2 cut(s) 582, 1055
FaqI GGGAC 4 cut(s) 595, 1042, 1188, 1901
FauI CCCGC 1 cut(s) 330
Fnu4HI GCNGC 7 cut(s) 1278, 1281, 1284, 1287, 1968, 2050, 2083
FokI GGATG 4 cut(s) 53, 131, 1660, 1847
FriOI GRGCYC 2 cut(s) 781, 2165
Fsp4HI GCNGC 7 cut(s) 1278, 1281, 1284, 1287, 1968, 2050, 2083
FspBI CTAG 8 cut(s) 431, 504, 563, 816, 1023, 1092, 1131, 1457
GlaI GCGC 3 cut(s) 473, 950, 2086
GluI GCNGC 7 cut(s) 1278, 1281, 1284, 1287, 1968, 2050, 2083
GsuI CTGGAG 4 cut(s) 408, 912, 1276, 1926
HaeII RGCGCY 1 cut(s) 2088
HaeIII GGCC 3 cut(s) 672, 699, 1150
HapII CCGG 1 cut(s) 673
HhaI GCGC 3 cut(s) 474, 951, 2087
Hin6I GCGC 3 cut(s) 472, 949, 2085
HinP1I GCGC 3 cut(s) 472, 949, 2085
HincII GTYRAC 1 cut(s) 705
HindII GTYRAC 1 cut(s) 705
HindIII AAGCTT 1 cut(s) 1677
HpaII CCGG 1 cut(s) 673
HphI GGTGA 6 cut(s) 346, 773, 1616, 1699, 1850, 2327
Hpy166II GTNNAC 4 cut(s) 169, 404, 705, 1775
Hpy188III TCNNGA 9 cut(s) 276, 387, 974, 1457, 1505, 1540, 1640, 1673, 2063
Hpy8I GTNNAC 4 cut(s) 169, 404, 705, 1775
HpyAV CCTTC 6 cut(s) 507, 522, 1375, 1637, 1648, 1814
HpyCH4IV ACGT 2 cut(s) 329, 1551
HpyF10VI GCNNNNNNNGC 9 cut(s) 500, 539, 764, 1180, 1260, 1283, 1286, 2049, 2093
HpyF3I CTNAG 5 cut(s) 303, 1386, 1713, 1791, 2139
HpySE526I ACGT 2 cut(s) 329, 1551
HspAI GCGC 3 cut(s) 472, 949, 2085
Kzo9I GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
LmnI GCTCC 3 cut(s) 334, 522, 625
Lsp1109I GCAGC 4 cut(s) 1264, 1295, 1954, 2061
LweI GCATC 8 cut(s) 35, 310, 901, 907, 929, 1078, 1504, 1746
MaeI CTAG 8 cut(s) 431, 504, 563, 816, 1023, 1092, 1131, 1457
MaeII ACGT 2 cut(s) 329, 1551
MaeIII GTNAC 8 cut(s) 142, 367, 457, 989, 1123, 1210, 1267, 1471
MalI GATC 7 cut(s) 37, 214, 247, 813, 1503, 1706, 1868
MbiI CCGCTC 1 cut(s) 337
MboI GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
MboII GAAGA 9 cut(s) 894, 1584, 1663, 1840, 1925, 1991, 2129, 2288, 2291
MfeI CAATTG 1 cut(s) 1320
MflI RGATCY 1 cut(s) 212
MhlI GDGCHC 3 cut(s) 781, 2165, 2229
MlsI TGGCCA 1 cut(s) 1150
MluNI TGGCCA 1 cut(s) 1150
MlyI GAGTC 8 cut(s) 557, 796, 903, 1505, 1876, 1933, 2085, 2191
MmeI TCCRAC 4 cut(s) 312, 703, 1904, 1975
Mox20I TGGCCA 1 cut(s) 1150
Mph1103I ATGCAT 3 cut(s) 922, 1438, 1761
MroXI GAANNNNTTC 1 cut(s) 1875
MscI TGGCCA 1 cut(s) 1150
MseI TTAA 6 cut(s) 477, 870, 1098, 1463, 1481, 2235
MslI CAYNNNNRTG 3 cut(s) 1509, 2106, 2288
Msp20I TGGCCA 1 cut(s) 1150
MspA1I CMGCKG 1 cut(s) 2082
MspI CCGG 1 cut(s) 673
MspR9I CCNGG 5 cut(s) 381, 527, 669, 882, 891
MunI CAATTG 1 cut(s) 1320
MvaI CCWGG 5 cut(s) 381, 527, 669, 882, 891
MvnI CGCG 2 cut(s) 474, 951
MwoI GCNNNNNNNGC 9 cut(s) 500, 539, 764, 1180, 1260, 1283, 1286, 2049, 2093
NdeII GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
NheI GCTAGC 2 cut(s) 430, 1091
NlaIV GGNNCC 4 cut(s) 495, 524, 1030, 1204
NmuCI GTSAC 3 cut(s) 989, 1123, 1471
NsiI ATGCAT 3 cut(s) 922, 1438, 1761
NspI RCATGY 1 cut(s) 965
OliI CACNNNNGTG 1 cut(s) 1509
PaeR7I CTCGAG 1 cut(s) 276
PdmI GAANNNNTTC 1 cut(s) 1875
PfeI GAWTC 5 cut(s) 375, 664, 1367, 1876, 2296
PflFI GACNNNGTC 1 cut(s) 746
PflMI CCANNNNNTGG 1 cut(s) 1399
PfoI TCCNGGA 1 cut(s) 889
PkrI GCNGC 7 cut(s) 1279, 1282, 1285, 1288, 1969, 2051, 2084
PleI GAGTC 8 cut(s) 556, 795, 902, 1504, 1876, 1933, 2085, 2191
PpsI GAGTC 8 cut(s) 556, 795, 902, 1504, 1876, 1933, 2085, 2191
Psp1406I AACGTT 1 cut(s) 329
Psp6I CCWGG 5 cut(s) 379, 525, 667, 880, 889
PspGI CCWGG 5 cut(s) 379, 525, 667, 880, 889
PspN4I GGNNCC 4 cut(s) 495, 524, 1030, 1204
PspPI GGNCC 4 cut(s) 404, 884, 1029, 1202
PstI CTGCAG 1 cut(s) 1755
PstNI CAGNNNCTG 1 cut(s) 1002
PsuI RGATCY 1 cut(s) 212
PsyI GACNNNGTC 1 cut(s) 746
RsaI GTAC 4 cut(s) 617, 633, 930, 1391
RsaNI GTAC 4 cut(s) 616, 632, 929, 1390
RseI CAYNNNNRTG 3 cut(s) 1509, 2106, 2288
SaqAI TTAA 6 cut(s) 477, 870, 1098, 1463, 1481, 2235
SatI GCNGC 7 cut(s) 1278, 1281, 1284, 1287, 1968, 2050, 2083
Sau3AI GATC 7 cut(s) 35, 212, 245, 811, 1501, 1704, 1866
Sau96I GGNCC 4 cut(s) 404, 884, 1029, 1202
ScaI AGTACT 1 cut(s) 617
SchI GAGTC 8 cut(s) 557, 796, 903, 1505, 1876, 1933, 2085, 2191
ScrFI CCNGG 5 cut(s) 381, 527, 669, 882, 891
SduI GDGCHC 3 cut(s) 781, 2165, 2229
SfaNI GCATC 8 cut(s) 35, 310, 901, 907, 929, 1078, 1504, 1746
SfcI CTRYAG 4 cut(s) 363, 944, 1751, 1848
Sfr274I CTCGAG 1 cut(s) 276
SinI GGWCC 4 cut(s) 404, 884, 1029, 1202
SlaI CTCGAG 1 cut(s) 276
SmiMI CAYNNNNRTG 3 cut(s) 1509, 2106, 2288
SmlI CTYRAG 6 cut(s) 208, 276, 294, 654, 2204, 2252
SmoI CTYRAG 6 cut(s) 208, 276, 294, 654, 2204, 2252
SsiI CCGC 6 cut(s) 337, 501, 951, 1280, 1287, 2082
SspMI CTAG 8 cut(s) 431, 504, 563, 816, 1023, 1092, 1131, 1457
StyD4I CCNGG 5 cut(s) 379, 525, 667, 880, 889
StyI CCWWGG 2 cut(s) 582, 1055
TaiI ACGT 2 cut(s) 332, 1554
TaqI TCGA 3 cut(s) 277, 1768, 1869
TatI WGTACW 2 cut(s) 615, 928
TauI GCSGC 3 cut(s) 1283, 1289, 2085
TfiI GAWTC 5 cut(s) 375, 664, 1367, 1876, 2296
Tru1I TTAA 6 cut(s) 477, 870, 1098, 1463, 1481, 2235
Tru9I TTAA 6 cut(s) 477, 870, 1098, 1463, 1481, 2235
TscAI CASTG 9 cut(s) 130, 317, 994, 1270, 1297, 1492, 1950, 1993, 2113
TseFI GTSAC 3 cut(s) 989, 1123, 1471
TseI GCWGC 4 cut(s) 1277, 1283, 1967, 2049
Tsp45I GTSAC 3 cut(s) 989, 1123, 1471
TspDTI ATGAA 6 cut(s) 218, 1185, 1316, 1664, 1776, 2028
TspRI CASTG 9 cut(s) 130, 317, 994, 1270, 1297, 1492, 1950, 1993, 2113
Tth111I GACNNNGTC 1 cut(s) 746
Van91I CCANNNNNTGG 1 cut(s) 1399
VpaK11BI GGWCC 4 cut(s) 404, 884, 1029, 1202
XagI CCTNNNNNAGG 3 cut(s) 657, 1059, 1158
XapI RAATTY 3 cut(s) 1081, 1303, 1615
XbaI TCTAGA 1 cut(s) 1456
XceI RCATGY 1 cut(s) 965
XhoI CTCGAG 1 cut(s) 276
XmnI GAANNNNTTC 1 cut(s) 1875
XspI CTAG 8 cut(s) 431, 504, 563, 816, 1023, 1092, 1131, 1457
ZrmI AGTACT 1 cut(s) 617
Zsp2I ATGCAT 3 cut(s) 922, 1438, 1761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.