Prupe.4G201900_v2.0.a1

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0006822
Physical Location & Seq
Reverse (-)
12543935 .. 12552032
8098 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G201900.1

Sequence Viewer

Length: 2730 bp
ATGATTCAGGCAGTCTTTGAAGAACCAGCAGTTTTCGTGATCTGGGTATTGGCTCGTTTGATCTCTCTGCTTCTGGGGATGAGGAATGATGGTGGCCAAAAGCAGCAGGGTGGTGTTCCTCGCCCCGCACGGACCAATAACTTCATTCCCAACTCGTTTCGTGCCATTTCAAGCTATTTGAGAATCGTTTCGTCTGGTGCTTCAACTGTTGCTCGTTCTGCAGCGTCGGTGGCTTCGTCCATTGTTGATAGGGATGATGACACCAACCATGATCAGGTGAACTGGGCTGGCTTTGACAAGTTAGAAGGTGAGGGAAATGTCACTCGGCAAGTTCTCCTGCTGGGTTACCGTTCTGGTTTCCAGGTTTGGGATGTTGAAGAATCTGATAATGTCCGTGACCTGGTTTCCAGATATGATGGCCCTGTCTCATTTATGCAAATGCTACCTAAACCAATAGCCTCAAAGAGATTGGAAGACAAGTTTGAAGAAAGCCGTCCATTGCTGGTAGTTTGTGCTGATGGGTCCATTTCTGTCGGCAGTAATATACAGGATGGGATGGCCTCTCCTCGCAATGGTATTAGTGCAACCAGCCATGACACAATGAAGAGTAGTTTTGTGCCTACTGTTGTTCGGTTTTATTCGTTGAGATCTCAATCTTATGTTCATGTTCTAAAGTTTAGATCAGTTGTTTATTCTGTAAAGTGCAGTTCTCGAGTTGTTGCTATTTCTCAAGCAGCTCAGATACACTGTTTTGATTCCACAACATTGGAGAGGGAATATACCATTCTTACCAATCCCATTGTTGCGGGATTCCCTGGTTCTGGAGGTATAGGTTGTGGACCTCTTGCAGTAGGCAAGAGGTGGCTGGCTTATAGTGGAAGTCCTGTCGCTGTATCTACTTCCGGGCGTGTCAGTCCACAACATCTGGAACCTTCTGCAAGTTTTTCTGGATTTCCTTCAAATGGGAGCCTGGTTGCTCACTATGCAAAAGAATCAAGCAAGCAACTAGCTGCTGGGATTGTAACCCTTGGAGACATGGGATATAAGAAGCTCTCCCAGTACTGCTCTGAGCTTGTACCTGATAGTAATATTCCGCTTCATTCAGGGAATCCTGGCTGGAAAAGCAATGGAACTGTCAATGGCCAGTCAGCAGACATGGATAATGTTGGAATGGTCATTGTCAGAGATATTGTCAGTAAAGTTGTTATTGCACAGTTTAGGGCCCACAAGAGTCCTATTTCTGCATTATGCTTTGATCGTAGTGGCACCCTTTTAGTGACTGCTTCGGTTCAGGGGCATAACATCAATGTTTTTAAAATAATGCCTGGAAACTCCTTTTCAACTGATGCTGCTGCATCTTATGTACATCTGTACAGGCTGCAACGGGGATTTACAAATGCAATCATACAGGACATCAGTTTTAGTGATGACAGCAACTGGATCATGGTTAGTTCCTCTAGGGGGACAAGCCATCTGTTTGCTATAAATCCTTGGGGAGGATCAGTAAATTTTCCAACTGCTGATGCTGGTATTACTACCAAAAATACAGGATTGGGTGTTACAAATAAATCGGCAGTTCGTTGGCCAGGTGTTCAAATGCCTAATCAGCAAAGCCTCTGCTCAGCTGGTCCCCCTGTTACACTTTCTGTTGTTAGTAGAATAAGAAATGGAAATAATAGTTGGAGAGGCACCGTAAGTGGTGCTGCAGCAGCTGCAACAGGGAAGATGAGTTCCCTTTCTGGGGCCATTGCTGCTTCTTTCCACAATTCCAAAGGCAATACTCATTATGTGGATTGCAGCTCTTCGAAGGCTAAGTACCACCTTTTGGTTTTTTCTCCTTCTGGTTCCATGATACAATATTCATTGCGAATCTCAAATGGTCCAGATTCGACAGCCGTGACTGGATTGAACACTGCTTATGAGTCAGGCCTGGAGGGTGATGCAAGATTAGCAGTTGAAGCTATTCAGAAATGGAATATATGTCAAAAACAAAATCGAAGAGAACGAGAGGATACTACTGACATATATGGTGAGAACGGAAATTTAGACAACAATAAGATATATCCTGAAGGGAAGAAAAAGGGAAACACCATTTATCCTGAAGCTTGGAGCACTGTCACAAAAGCAAAGATCAGCCCTGAGGAGAAACATCAGTTGTATATTTCAGAAGCCGAACTGCAGATGCATGAAACTCAAAGTCCAGTGTGGGCAAAACCTGAGCTATACTTTCAGTCAATGATCATGGAAGGTGTCAAAATGGATGATGAAACTGCTTCAGGAGGGGAAATTGAGATCGAAAGGATTCCAACTCGCACGATTGAAGCAAGGTCAAAGGATTTGGTCCCGGTTTTTGACTATCTTCAAACTCCCAGATTCCAACAAACAAGGGTTGCTGCTATAGATAGCAATGTTAGCGGGATATCTGAAAATGGCAGGCTTTCATGCAGAAGCAGTTCAGGCTCTCTTGACACCATGACTGACAGTGGTGCTGGTGTGGCAGAACTTAGCAATGGCACCGAGGAAACTGAGTGGGGTGGTTCTCAGACGCCCGTAGAAAGCAAGCGTTTTGTAAATAACAATGACAGCCAAAAGACAAAGACTCAGCTTGAGATTGTAAATAATAGGGAGAGGACCTTAAAAACGGAGGCCCAACTTAAGTTTGTAAATAGTAACATAGAAGGCATGGGAATGGAGAATCTATTCAGAGAGGAAGGTGATGAGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

910

Amino Acids

98.59

Weight (kDa)

6.63

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1265, 1688, 2513
AccB7I CCANNNNNTGG 1 cut(s) 1825
AciI CCGC 4 cut(s) 126, 806, 1094, 2415
AclWI GGATC 2 cut(s) 1448, 1507
AcoI YGGCCR 3 cut(s) 94, 1141, 1583
AcsI RAATTY 2 cut(s) 1507, 2041
AcuI CTGAAG 3 cut(s) 2088, 2121, 2259
AcyI GRCGYC 1 cut(s) 2546
AfaI GTAC 5 cut(s) 1061, 1077, 1365, 1373, 1817
AflII CTTAAG 1 cut(s) 2654
AjnI CCWGG 8 cut(s) 360, 399, 814, 969, 1111, 1324, 1585, 1929
AjuI GAANNNNNNNTTGG 2 cut(s) 1663, 1695
AloI GAACNNNNNNTCC 2 cut(s) 1714, 1746
Alw21I GWGCWC 1 cut(s) 2114
Alw26I GTCTC 2 cut(s) 430, 1026
AlwI GGATC 2 cut(s) 1448, 1507
AlwNI CAGNNNCTG 2 cut(s) 1437, 1712
Ama87I CYCGRG 1 cut(s) 711
AoxI GGCC 9 cut(s) 94, 418, 558, 1141, 1221, 1583, 1743, 1927, 2646
ApaI GGGCCC 1 cut(s) 1225
ApoI RAATTY 2 cut(s) 1507, 2041
Asp700I GAANNNNTTC 5 cut(s) 187, 1962, 2301, 2452, 2699
AsuC2I CCSGG 2 cut(s) 904, 2345
AsuHPI GGTGA 5 cut(s) 289, 320, 1949, 2042, 2726
AsuII TTCGAA 1 cut(s) 1805
AvaI CYCGRG 1 cut(s) 711
AvaII GGWCC 7 cut(s) 132, 522, 839, 1628, 1880, 2341, 2631
AxyI CCTNAGG 1 cut(s) 2139
BaeGI GKGCMC 1 cut(s) 1225
BalI TGGCCA 3 cut(s) 96, 1143, 1585
BanI GGYRCC 3 cut(s) 1265, 1688, 2513
BanII GRGCYC 1 cut(s) 1225
BarI GAAGNNNNNNTAC 2 cut(s) 1799, 1831
BbsI GAAGAC 1 cut(s) 480
Bbv12I GWGCWC 1 cut(s) 2114
BccI CCATC 6 cut(s) 83, 410, 512, 545, 550, 1479
BceAI ACGGC 2 cut(s) 477, 1880
BciT130I CCWGG 8 cut(s) 362, 401, 816, 971, 1113, 1326, 1587, 1931
BciVI GTATCC 1 cut(s) 2005
BclI TGATCA 2 cut(s) 271, 2238
BcnI CCSGG 2 cut(s) 904, 2345
BcoDI GTCTC 2 cut(s) 430, 1026
BfaI CTAG 2 cut(s) 1007, 1458
BfmI CTRYAG 4 cut(s) 219, 1704, 2177, 2397
BfrI CTTAAG 1 cut(s) 2654
BfuI GTATCC 1 cut(s) 2005
BglII AGATCT 1 cut(s) 647
BlpI GCTNAGC 1 cut(s) 1621
BmcAI AGTACT 1 cut(s) 1061
Bme18I GGWCC 7 cut(s) 132, 522, 839, 1628, 1880, 2341, 2631
BmeT110I CYCGRG 1 cut(s) 711
BmrI ACTGGG 2 cut(s) 292, 1051
BmsI GCATC 5 cut(s) 1336, 1364, 1513, 1930, 2172
BmuI ACTGGG 2 cut(s) 292, 1051
BpiI GAAGAC 1 cut(s) 480
BpmI CTGGAG 2 cut(s) 843, 1952
Bpu10I CCTNAGC 1 cut(s) 2217
Bpu1102I GCTNAGC 1 cut(s) 1621
Bpu14I TTCGAA 1 cut(s) 1805
BpuEI CTTGAG 2 cut(s) 714, 2627
BpuMI CCSGG 2 cut(s) 904, 2345
BsaBI GATNNNNATC 1 cut(s) 652
BsaHI GRCGYC 1 cut(s) 2546
BsaJI CCNNGG 4 cut(s) 814, 1027, 1490, 2517
BsaXI ACNNNNNCTCC 2 cut(s) 1488, 1518
Bse1I ACTGG 6 cut(s) 287, 1057, 1144, 1442, 1906, 2201
Bse21I CCTNAGG 1 cut(s) 2139
Bse3DI GCAATG 7 cut(s) 497, 577, 1132, 1746, 1862, 2413, 2515
Bse8I GATNNNNATC 1 cut(s) 652
BseBI CCWGG 8 cut(s) 362, 401, 816, 971, 1113, 1326, 1587, 1931
BseDI CCNNGG 4 cut(s) 814, 1027, 1490, 2517
BseGI GGATG 6 cut(s) 84, 259, 376, 556, 561, 2266
BseJI GATNNNNATC 1 cut(s) 652
BseMI GCAATG 7 cut(s) 497, 577, 1132, 1746, 1862, 2413, 2515
BseMII CTCAG 8 cut(s) 752, 1059, 1635, 2130, 2208, 2517, 2555, 2615
BseNI ACTGG 6 cut(s) 287, 1057, 1144, 1442, 1906, 2201
BseRI GAGGAG 2 cut(s) 555, 2156
BseSI GKGCMC 1 cut(s) 1225
BseYI CCCAGC 2 cut(s) 340, 1013
BsgI GTGCAG 1 cut(s) 724
BshFI GGCC 9 cut(s) 96, 420, 560, 1143, 1223, 1585, 1745, 1929, 2648
BshNI GGYRCC 3 cut(s) 1265, 1688, 2513
BsiHKAI GWGCWC 1 cut(s) 2114
BsiHKCI CYCGRG 1 cut(s) 711
BsiSI CCGG 2 cut(s) 903, 2345
BslFI GGGAC 3 cut(s) 1477, 1614, 2327
BsmAI GTCTC 2 cut(s) 430, 1026
BsmFI GGGAC 3 cut(s) 1477, 1614, 2327
BsnI GGCC 9 cut(s) 96, 420, 560, 1143, 1223, 1585, 1745, 1929, 2648
BsoBI CYCGRG 1 cut(s) 711
Bsp119I TTCGAA 1 cut(s) 1805
Bsp120I GGGCCC 1 cut(s) 1221
Bsp1286I GDGCHC 2 cut(s) 1225, 2114
Bsp1407I TGTACA 2 cut(s) 1363, 1371
Bsp1720I GCTNAGC 1 cut(s) 1621
BspACI CCGC 4 cut(s) 126, 806, 1094, 2415
BspANI GGCC 9 cut(s) 96, 420, 560, 1143, 1223, 1585, 1745, 1929, 2648
BspCNI CTCAG 8 cut(s) 751, 1060, 1634, 2131, 2209, 2518, 2554, 2614
BspMAI CTGCAG 3 cut(s) 223, 1708, 2181
BspPI GGATC 2 cut(s) 1448, 1507
BspQI GCTCTTC 1 cut(s) 1807
BspT104I TTCGAA 1 cut(s) 1805
BspT107I GGYRCC 3 cut(s) 1265, 1688, 2513
BspTI CTTAAG 1 cut(s) 2654
BsrDI GCAATG 7 cut(s) 497, 577, 1132, 1746, 1862, 2413, 2515
BsrGI TGTACA 2 cut(s) 1363, 1371
BsrI ACTGG 6 cut(s) 287, 1057, 1144, 1442, 1906, 2201
BssECI CCNNGG 4 cut(s) 814, 1027, 1490, 2517
BssNI GRCGYC 1 cut(s) 2546
BssT1I CCWWGG 2 cut(s) 1027, 1490
Bst2UI CCWGG 8 cut(s) 362, 401, 816, 971, 1113, 1326, 1587, 1931
Bst4CI ACNGT 9 cut(s) 208, 350, 625, 749, 1135, 1215, 1693, 2116, 2483
Bst6I CTCTTC 3 cut(s) 599, 1807, 1993
BstACI GRCGYC 1 cut(s) 2546
BstAFI CTTAAG 1 cut(s) 2654
BstAPI GCANNNNNTGC 1 cut(s) 1712
BstAUI TGTACA 2 cut(s) 1363, 1371
BstBI TTCGAA 1 cut(s) 1805
BstC8I GCNNGC 5 cut(s) 289, 867, 1001, 2435, 2561
BstEII GGTNACC 1 cut(s) 344
BstENI CCTNNNNNAGG 1 cut(s) 1494
BstF5I GGATG 6 cut(s) 84, 259, 376, 556, 561, 2266
BstMAI GTCTC 2 cut(s) 430, 1026
BstNI CCWGG 8 cut(s) 362, 401, 816, 971, 1113, 1326, 1587, 1931
BstPI GGTNACC 1 cut(s) 344
BstSFI CTRYAG 4 cut(s) 219, 1704, 2177, 2397
BstSLI GKGCMC 1 cut(s) 1225
BstV2I GAAGAC 1 cut(s) 480
BstX2I RGATCY 1 cut(s) 647
BstXI CCANNNNNNTGG 1 cut(s) 766
BstYI RGATCY 1 cut(s) 647
Bsu36I CCTNAGG 1 cut(s) 2139
BsuI GTATCC 1 cut(s) 2005
BsuRI GGCC 9 cut(s) 96, 420, 560, 1143, 1223, 1585, 1745, 1929, 2648
BtsCI GGATG 6 cut(s) 84, 259, 376, 556, 561, 2266
BtsI GCAGTG 1 cut(s) 1911
BtsIMutI CAGTG 5 cut(s) 745, 1911, 2112, 2208, 2488
Cac8I GCNNGC 5 cut(s) 289, 867, 1001, 2435, 2561
CaiI CAGNNNCTG 2 cut(s) 1437, 1712
CseI GACGC 2 cut(s) 213, 2554
CsiI ACCWGGT 1 cut(s) 399
Csp6I GTAC 5 cut(s) 1060, 1076, 1364, 1372, 1816
CviQI GTAC 5 cut(s) 1060, 1076, 1364, 1372, 1816
DraI TTTAAA 1 cut(s) 1315
EaeI YGGCCR 3 cut(s) 94, 1141, 1583
Eam1104I CTCTTC 3 cut(s) 599, 1807, 1993
EarI CTCTTC 3 cut(s) 599, 1807, 1993
Eco130I CCWWGG 2 cut(s) 1027, 1490
Eco147I AGGCCT 1 cut(s) 1929
Eco24I GRGCYC 1 cut(s) 1225
Eco32I GATATC 1 cut(s) 2421
Eco47I GGWCC 7 cut(s) 132, 522, 839, 1628, 1880, 2341, 2631
Eco57I CTGAAG 3 cut(s) 2088, 2121, 2259
Eco81I CCTNAGG 1 cut(s) 2139
Eco88I CYCGRG 1 cut(s) 711
Eco91I GGTNACC 1 cut(s) 344
EcoNI CCTNNNNNAGG 1 cut(s) 1494
EcoO109I RGGNCCY 2 cut(s) 1221, 2631
EcoO65I GGTNACC 1 cut(s) 344
EcoRII CCWGG 8 cut(s) 360, 399, 814, 969, 1111, 1324, 1585, 1929
EcoRV GATATC 1 cut(s) 2421
EcoT14I CCWWGG 2 cut(s) 1027, 1490
EcoT22I ATGCAT 1 cut(s) 2187
EcoT38I GRGCYC 1 cut(s) 1225
ErhI CCWWGG 2 cut(s) 1027, 1490
FaqI GGGAC 3 cut(s) 1477, 1614, 2327
FauI CCCGC 3 cut(s) 133, 799, 2408
FbaI TGATCA 2 cut(s) 271, 2238
FokI GGATG 6 cut(s) 91, 266, 383, 563, 568, 2273
FriOI GRGCYC 1 cut(s) 1225
FspBI CTAG 2 cut(s) 1007, 1458
GsaI CCCAGC 2 cut(s) 344, 1017
GsuI CTGGAG 2 cut(s) 843, 1952
HaeIII GGCC 9 cut(s) 96, 420, 560, 1143, 1223, 1585, 1745, 1929, 2648
HapII CCGG 2 cut(s) 903, 2345
HgaI GACGC 2 cut(s) 213, 2554
Hin1I GRCGYC 1 cut(s) 2546
HindIII AAGCTT 1 cut(s) 2103
HpaII CCGG 2 cut(s) 903, 2345
HphI GGTGA 5 cut(s) 289, 320, 1949, 2042, 2726
Hpy166II GTNNAC 3 cut(s) 280, 839, 917
Hpy188I TCNGA 9 cut(s) 385, 741, 1069, 1184, 1968, 2167, 2425, 2544, 2705
Hpy8I GTNNAC 3 cut(s) 280, 839, 917
Hpy99I CGWCG 1 cut(s) 229
HpyAV CCTTC 9 cut(s) 299, 942, 966, 1801, 1848, 2063, 2240, 2672, 2705
HpyCH4III ACNGT 9 cut(s) 208, 350, 625, 749, 1135, 1215, 1693, 2116, 2483
Hsp92I GRCGYC 1 cut(s) 2546
Ksp22I TGATCA 2 cut(s) 271, 2238
LguI GCTCTTC 1 cut(s) 1807
LmnI GCTCC 2 cut(s) 966, 2109
LweI GCATC 5 cut(s) 1336, 1364, 1513, 1930, 2172
MabI ACCWGGT 1 cut(s) 399
MaeI CTAG 2 cut(s) 1007, 1458
MflI RGATCY 1 cut(s) 647
MhlI GDGCHC 2 cut(s) 1225, 2114
MlsI TGGCCA 3 cut(s) 96, 1143, 1585
MluCI AATT 4 cut(s) 1507, 1765, 2041, 2286
MluNI TGGCCA 3 cut(s) 96, 1143, 1585
MlyI GAGTC 3 cut(s) 1240, 1931, 2593
MmeI TCCRAC 5 cut(s) 1147, 1538, 1661, 2330, 2401
Mox20I TGGCCA 3 cut(s) 96, 1143, 1585
Mph1103I ATGCAT 1 cut(s) 2187
MroXI GAANNNNTTC 5 cut(s) 187, 1962, 2301, 2452, 2699
MscI TGGCCA 3 cut(s) 96, 1143, 1585
MseI TTAA 3 cut(s) 1314, 2636, 2655
MslI CAYNNNNRTG 1 cut(s) 2687
Msp20I TGGCCA 3 cut(s) 96, 1143, 1585
MspA1I CMGCKG 2 cut(s) 1625, 1712
MspCI CTTAAG 1 cut(s) 2654
MspI CCGG 2 cut(s) 903, 2345
MvaI CCWGG 8 cut(s) 362, 401, 816, 971, 1113, 1326, 1587, 1931
NciI CCSGG 2 cut(s) 904, 2345
NmeAIII GCCGAG 1 cut(s) 304
NmuCI GTSAC 5 cut(s) 319, 395, 1276, 1897, 2116
NsiI ATGCAT 1 cut(s) 2187
NspV TTCGAA 1 cut(s) 1805
PaeR7I CTCGAG 1 cut(s) 711
PceI AGGCCT 1 cut(s) 1929
PciSI GCTCTTC 1 cut(s) 1807
PcsI WCGNNNNNNNCGW 2 cut(s) 233, 2002
PdmI GAANNNNTTC 5 cut(s) 187, 1962, 2301, 2452, 2699
PflMI CCANNNNNTGG 1 cut(s) 1825
PleI GAGTC 3 cut(s) 1239, 1930, 2593
PpsI GAGTC 3 cut(s) 1239, 1930, 2593
PpuMI RGGWCCY 1 cut(s) 2631
Psp5II RGGWCCY 1 cut(s) 2631
Psp6I CCWGG 8 cut(s) 360, 399, 814, 969, 1111, 1324, 1585, 1929
PspEI GGTNACC 1 cut(s) 344
PspFI CCCAGC 2 cut(s) 340, 1013
PspGI CCWGG 8 cut(s) 360, 399, 814, 969, 1111, 1324, 1585, 1929
PspOMI GGGCCC 1 cut(s) 1221
PspPPI RGGWCCY 1 cut(s) 2631
PstI CTGCAG 3 cut(s) 223, 1708, 2181
PstNI CAGNNNCTG 2 cut(s) 1437, 1712
PsuI RGATCY 1 cut(s) 647
PvuII CAGCTG 2 cut(s) 1625, 1712
RsaI GTAC 5 cut(s) 1061, 1077, 1365, 1373, 1817
RsaNI GTAC 5 cut(s) 1060, 1076, 1364, 1372, 1816
RseI CAYNNNNRTG 1 cut(s) 2687
SapI GCTCTTC 1 cut(s) 1807
SaqAI TTAA 3 cut(s) 1314, 2636, 2655
ScaI AGTACT 1 cut(s) 1061
SchI GAGTC 3 cut(s) 1240, 1931, 2593
SduI GDGCHC 2 cut(s) 1225, 2114
SexAI ACCWGGT 1 cut(s) 399
SfaNI GCATC 5 cut(s) 1336, 1364, 1513, 1930, 2172
SfcI CTRYAG 4 cut(s) 219, 1704, 2177, 2397
Sfr274I CTCGAG 1 cut(s) 711
SfuI TTCGAA 1 cut(s) 1805
SinI GGWCC 7 cut(s) 132, 522, 839, 1628, 1880, 2341, 2631
SlaI CTCGAG 1 cut(s) 711
SmiMI CAYNNNNRTG 1 cut(s) 2687
SmlI CTYRAG 4 cut(s) 711, 729, 2606, 2654
SmoI CTYRAG 4 cut(s) 711, 729, 2606, 2654
Sse9I AATT 4 cut(s) 1507, 1765, 2041, 2286
SseBI AGGCCT 1 cut(s) 1929
SsiI CCGC 4 cut(s) 126, 806, 1094, 2415
SspI AATATT 2 cut(s) 1090, 1859
SspMI CTAG 2 cut(s) 1007, 1458
StuI AGGCCT 1 cut(s) 1929
StyI CCWWGG 2 cut(s) 1027, 1490
TaaI ACNGT 9 cut(s) 208, 350, 625, 749, 1135, 1215, 1693, 2116, 2483
TaqI TCGA 5 cut(s) 712, 1805, 1889, 1996, 2295
TasI AATT 4 cut(s) 1507, 1765, 2041, 2286
TatI WGTACW 3 cut(s) 1059, 1363, 1371
Tru1I TTAA 3 cut(s) 1314, 2636, 2655
Tru9I TTAA 3 cut(s) 1314, 2636, 2655
TscAI CASTG 5 cut(s) 752, 1918, 2119, 2208, 2488
TseFI GTSAC 5 cut(s) 319, 395, 1276, 1897, 2116
Tsp45I GTSAC 5 cut(s) 319, 395, 1276, 1897, 2116
TspDTI ATGAA 8 cut(s) 133, 617, 653, 1088, 1851, 2202, 2280, 2430
TspGWI ACGGA 4 cut(s) 145, 383, 2052, 2657
TspRI CASTG 5 cut(s) 752, 1918, 2119, 2208, 2488
Van91I CCANNNNNTGG 1 cut(s) 1825
Vha464I CTTAAG 1 cut(s) 2654
VpaK11BI GGWCC 7 cut(s) 132, 522, 839, 1628, 1880, 2341, 2631
XagI CCTNNNNNAGG 1 cut(s) 1494
XapI RAATTY 2 cut(s) 1507, 2041
XhoI CTCGAG 1 cut(s) 711
XmnI GAANNNNTTC 5 cut(s) 187, 1962, 2301, 2452, 2699
XspI CTAG 2 cut(s) 1007, 1458
ZrmI AGTACT 1 cut(s) 1061
Zsp2I ATGCAT 1 cut(s) 2187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.