AT5G57710

chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013028
Physical Location & Seq
Forward (+)
23384255 .. 23388465
4211 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G57710.1

Sequence Viewer

Length: 2973 bp
ATGAGAGCTGGTTTAAGTACGATTCAACAGACTCTGACGCCGGAGGCTGCCACCGTTTTAAACCAATCAATCGCCGAAGCCGCGCGTCGTAATCACGGCCAAACCACTCCTCTCCACGTTGCAGCCACTCTTCTAGCTTCTCCTGCTGGGTTTCTCCGACGAGCTTGTATCCGATCTCACCCCAATTCTTCTCATCCTTTACAGTGTCGAGCCCTCGAGCTCTGCTTCAGCGTCGCCTTAGAGCGTCTCCCAACAGCTACAACCACTCCGGGGAATGATCCACCGATCTCAAACGCGCTTATGGCGGCGCTTAAACGAGCTCAAGCTCATCAACGCCGTGGTTGTCCGGAGCAACAACAGCAACCGTTGTTGGCCGTTAAAGTTGAGCTTGAACAGCTCATTATCTCGATTTTGGATGATCCGAGTGTTAGTCGGGTTATGAGAGAAGCTAGCTTTTCAAGTCCCGCCGTTAAAGCTACAATTGAACAGTCGTTGAATAATTCGGTTACTCCGACGCCGATTCCTAGTGTTTCTTCAGTCGGGTTGAATTTTAGACCCGGTGGTGGAGGTCCGATGACCCGGAATTCGTATCTTAATCCACGGTTACAACAGAACGCTTCGTCGGTACAATCAGGGGTGAGTAAGAACGATGATGTGGAGCGGGTTATGGATATATTGGGTCGGGCGAAGAAGAAAAACCCGGTTTTGGTTGGTGATTCGGAGCCGGGTCGGGTTATTCGTGAGATCCTTAAGAAAATTGAAGTCGGTGAAGTTGGGAATTTAGCGGTGAAGAACTCAAAGGTGGTTTCTTTAGAGGAGATTAGTTCCGATAAGGCTTTAAGAATTAAGGAATTAGATGGGTTGCTTCAGACCCGATTAAAGAATTCGGATCCTATTGGTGGCGGCGGAGTGATACTTGATCTTGGTGACTTGAAATGGCTAGTGGAGCAACCGAGTTCAACGCAACCGCCGGCTACGGTTGCGGTGGAGATTGGGAGGACGGCGGTGGTGGAGTTACGGAGGCTTTTGGAGAAGTTTGAAGGAAGACTCTGGTTTATAGGGACGGCGACGTGTGAGACTTATTTAAGATGTCAAGTTTATCATCCATCAGTGGAGACTGATTGGGATCTTCAAGCTGTGTCGGTGGCAGCTAAAGCTCCAGCGTCTGGCGTTTTCCCGAGGCTTGCGAACAATTTGGAATCATTCACGCCATTGAAGAGCTTTGTGCCTGCGAATAGGACATTGAAATGTTGTCCACAGTGTTTACAGAGTTACGAGCGAGAACTTGCTGAGATTGATTCAGTGTCTTCTCCAGAGGTTAAATCTGAAGTAGCTCAGCCTAAACAGTTGCCACAGTGGCTGTTGAAAGCTAAACCGGTTGATCGTTTACCGCAAGCAAAGATTGAAGAAGTGCAGAAGAAATGGAATGATGCATGCGTGCGTCTTCATCCTAGCTTTCATAACAAGAACGAGAGGATTGTTCCGATCCCGGTTCCTATAACGTTGACAACGAGCCCTTACAGTCCTAACATGCTTCTTCGTCAGCCGTTGCAGCCTAAGTTACAGCCTAATAGAGAGTTGCGTGAGAGGGTACACTTGAAGCCTATGAGTCCTTTGGTGGCTGAGCAGGCCAAGAAGAAGAGTCCTCCCGGGAGCCCGGTTCAGACCGATCTTGTTCTTGGACGAGCAGAGGATTCGGAGAAAGCAGGAGATGTGCAAGTAAGAGACTTTCTCGGCTGCATATCGTCTGAATCAGTGCAGAACAATAATAACATCAGTGTTTTGCAAAAGGAGAATCTTGGGAATTCGTTAGACATTGATTTGTTTAAGAAGCTGTTGAAGGGAATGACCGAGAAAGTTTGGTGGCAGAATGATGCAGCCGCTGCGGTGGCTGCAACTGTTAGTCAGTGCAAGCTCGGGAATGGGAAACGACGCGGTGTTTTATCAAAGGGAGATGTCTGGTTACTTTTTTCAGGACCGGATAGAGTGGGGAAGAGAAAAATGGTGTCAGCTCTGTCTTCTCTTGTGTATGGGACGAATCCAATAATGATTCAGCTCGGGTCGAGACAAGATGCTGGAGATGGAAATTCTAGTTTCCGTGGTAAAACCGCGTTGGATAAGATTGCGGAAACTGTTAAGAGGAGTCCGTTCTCTGTTATCTTGCTTGAAGATATTGACGAAGCTGATATGTTGGTGCGTGGAAGCATAAAACAGGCAATGGATAGAGGCAGAATCCGTGACTCGCATGGCCGTGAGATCAGTTTAGGTAACGTGATCTTTGTTATGACAGCGAGCTGGCATTTCGCAGGGACGAAAACATCGTTCCTAGACAATGAAGCAAAACTACGAGATTTGGCTAGCGAAAGCTGGCGTTTGAGGTTGTGCATGCGGGAGAAATTTGGGAAACGACGAGCAAGTTGGCTGTGTAGCGACGAGGAGAGGCTGACGAAACCGAAGAAAGAACATGGATCGGGTTTATCTTTCGATCTGAACCAAGCCGCTGATACGGATGATGGTTCTCATAATACGAGCGATCTAACAACAGATAATGATCAAGACGAGCAAGGTTTTAGTGGAAAGCTGTCACTACAATGCGTTCCATTTGCATTCCACGATATGGTTAGCCGTGTAGATGATGCGGTAGCGTTTCGAGCAGTTGATTTCGCAGCTGTGAGACGGAGAATCACAGAAACATTATCTGAGAGATTCGAAACGATCATAGGCGAATCACTATCAGTAGAAGTCGAGGAAGAGGCACTTCAGAGAATCTTGAGTGGAGTGTGGTTAGGCCAAACAGAGTTAGAGGAATGGATTGAGAAAGCGATTGTTCCGGTGTTGAGCCAACTTAAGGCTCGAGTTTCGTCTTCTGGTACTTACGGTGACTGTACGGTTGCTCGGCTCGAGCTAGATGAAGATTCCGGTGAACGAAACGCCGGTGATTTACTGCCGACAACTATTACTTTGGCAGTATGA

Protein Analysis

990

Amino Acids

108.71

Weight (kDa)

8.32

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Clp_N PF02861 12 - 112 3.2e-07 Clp repeat (R) N-terminal domain
NBD_SMAX1 PF23569 214 - 385 3.7e-30 SMAX1 nucleotide binding domain
AAA_2 PF07724 708 - 774 7.1e-10 AAA domain (Cdc48 subfamily)
AAA_lid_SMAX1 PF26587 887 - 973 5.9e-22 SMAX1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57710
fragaria_vesca FvH4_4g09820
malus_domestica MD13G1261900.v1.1 MD16G1264200.v1.1
prunus_persica Prupe.1G095200_v2.0.a1 Prupe.1G095200_v2.0.a1
pyrus_communis pycom13g24720 pycom16g23290
rosa_chinensis RchiOBHm_Chr4g0404601
rosa_laevigata RLG00000008920
rosa_multiflora Rmu_sc0002699.1_g000006
rosa_roxburghii Rroxscaffold_5G00348750
rosa_rugosa Rorug04G0047700
rosa_samantha Rh4AG123800 Rh4BG117200 Rh4CG131900 Rh4DG116700
rosa_wichuraiana Rw4G010030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1166, 2617
AccBSI CCGCTC 1 cut(s) 661
AccII CGCG 5 cut(s) 83, 85, 296, 1935, 2111
AccIII TCCGGA 1 cut(s) 346
AclI AACGTT 1 cut(s) 1502
AclWI GGATC 8 cut(s) 272, 413, 739, 884, 897, 1134, 1480, 2476
AcoI YGGCCR 3 cut(s) 97, 372, 2248
AcsI RAATTY 7 cut(s) 547, 583, 778, 883, 1804, 2086, 2396
AcuI CTGAAG 5 cut(s) 211, 519, 851, 1347, 2744
AcyI GRCGYC 2 cut(s) 38, 515
AfaI GTAC 5 cut(s) 19, 627, 1593, 2872, 2887
AfiI CCNNNNNNNGG 7 cut(s) 270, 563, 706, 899, 1166, 2617, 2848
AflII CTTAAG 2 cut(s) 749, 2846
AflIII ACRYGT 1 cut(s) 1070
AgeI ACCGGT 1 cut(s) 1375
AjiI CACGTC 1 cut(s) 1071
Alw21I GWGCWC 2 cut(s) 222, 322
Alw26I GTCTC 6 cut(s) 251, 1070, 1109, 1719, 2059, 2668
AlwI GGATC 8 cut(s) 272, 413, 739, 884, 897, 1134, 1480, 2476
AlwNI CAGNNNCTG 4 cut(s) 34, 1166, 1360, 1883
Ama87I CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 5 cut(s) 97, 372, 1629, 2248, 2788
ApeKI GCWGC 9 cut(s) 47, 122, 1148, 1552, 1737, 1877, 1883, 1892, 2666
ApoI RAATTY 7 cut(s) 547, 583, 778, 883, 1804, 2086, 2396
ArsI GACNNNNNNTTYG 2 cut(s) 568, 600
AsiGI ACCGGT 1 cut(s) 1375
AspLEI GCGC 3 cut(s) 85, 298, 310
AspS9I GGNCC 2 cut(s) 569, 1976
AsuC2I CCSGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
AsuHPI GGTGA 9 cut(s) 170, 649, 725, 779, 799, 938, 2891, 2933, 2948
AsuII TTCGAA 1 cut(s) 2709
AsuNHI GCTAGC 2 cut(s) 449, 2357
AvaI CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
AvaII GGWCC 2 cut(s) 569, 1976
BamHI GGATCC 1 cut(s) 889
BanII GRGCYC 5 cut(s) 214, 222, 322, 1517, 1658
BarI GAAGNNNNNNTAC 2 cut(s) 2328, 2360
BbsI GAAGAC 5 cut(s) 1051, 1299, 1436, 2010, 2856
Bbv12I GWGCWC 2 cut(s) 222, 322
BbvI GCAGC 9 cut(s) 34, 134, 1160, 1564, 1724, 1870, 1879, 1889, 2678
BccI CCATC 4 cut(s) 851, 1114, 2075, 2507
BceAI ACGGC 9 cut(s) 112, 321, 359, 452, 1017, 1080, 1531, 2235, 2610
BcgI CGANNNNNNTGC 2 cut(s) 1677, 1711
BciVI GTATCC 1 cut(s) 179
BclI TGATCA 1 cut(s) 2551
BcnI CCSGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
BcoDI GTCTC 6 cut(s) 251, 1070, 1109, 1719, 2059, 2668
BfaI CTAG 9 cut(s) 134, 450, 525, 941, 1452, 2091, 2327, 2358, 2906
BfoI RGCGCY 1 cut(s) 311
BfrI CTTAAG 2 cut(s) 749, 2846
BfuI GTATCC 1 cut(s) 179
BglI GCCNNNNNGGC 1 cut(s) 1357
BlpI GCTNAGC 2 cut(s) 1335, 1623
Bme1390I CCNGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
Bme18I GGWCC 2 cut(s) 569, 1976
BmeT110I CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
BmgBI CACGTC 1 cut(s) 1071
BmgT120I GGNCC 2 cut(s) 569, 1976
BmiI GGNNCC 4 cut(s) 723, 891, 1494, 1655
BmrFI CCNGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
BmsI GCATC 4 cut(s) 1420, 1864, 2062, 2626
BmtI GCTAGC 2 cut(s) 453, 2361
BpiI GAAGAC 5 cut(s) 1051, 1299, 1436, 2010, 2856
BplI GAGNNNNNCTC 2 cut(s) 1716, 1748
BpmI CTGGAG 3 cut(s) 1143, 1296, 2097
Bpu1102I GCTNAGC 2 cut(s) 1335, 1623
Bpu14I TTCGAA 1 cut(s) 2709
BpuEI CTTGAG 2 cut(s) 306, 2791
BpuMI CCSGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
BsaBI GATNNNNATC 2 cut(s) 1125, 2550
BsaHI GRCGYC 2 cut(s) 38, 515
BsaJI CCNNGG 6 cut(s) 269, 337, 599, 1178, 1649, 2098
BsaWI WCCGGW 5 cut(s) 346, 1375, 1978, 2830, 2918
BsaXI ACNNNNNCTCC 2 cut(s) 250, 280
Bsc4I CCNNNNNNNGG 7 cut(s) 270, 563, 706, 899, 1166, 2617, 2848
Bse118I RCCGGY 3 cut(s) 970, 1375, 2933
Bse3DI GCAATG 1 cut(s) 2223
Bse8I GATNNNNATC 2 cut(s) 1125, 2550
BseAI TCCGGA 1 cut(s) 346
BseDI CCNNGG 6 cut(s) 269, 337, 599, 1178, 1649, 2098
BseGI GGATG 5 cut(s) 193, 421, 1102, 1447, 2515
BseJI GATNNNNATC 2 cut(s) 1125, 2550
BseLI CCNNNNNNNGG 7 cut(s) 270, 563, 706, 899, 1166, 2617, 2848
BseMI GCAATG 1 cut(s) 2223
BseMII CTCAG 4 cut(s) 1281, 1349, 1614, 2691
BseRI GAGGAG 4 cut(s) 99, 830, 2155, 2450
BseXI GCAGC 9 cut(s) 34, 134, 1160, 1564, 1724, 1870, 1879, 1889, 2678
BseYI CCCAGC 1 cut(s) 146
BsgI GTGCAG 2 cut(s) 1433, 1778
Bsh1236I CGCG 5 cut(s) 83, 85, 296, 1935, 2111
BshFI GGCC 5 cut(s) 99, 374, 1631, 2250, 2790
BshTI ACCGGT 1 cut(s) 1375
BsiHKAI GWGCWC 2 cut(s) 222, 322
BsiHKCI CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
BslFI GGGAC 4 cut(s) 447, 1075, 2047, 2323
BslI CCNNNNNNNGG 7 cut(s) 270, 563, 706, 899, 1166, 2617, 2848
BsmAI GTCTC 6 cut(s) 251, 1070, 1109, 1719, 2059, 2668
BsmBI CGTCTC 2 cut(s) 251, 2668
BsmFI GGGAC 4 cut(s) 447, 1075, 2047, 2323
BsmI GAATGC 1 cut(s) 2606
BsnI GGCC 5 cut(s) 99, 374, 1631, 2250, 2790
BsoBI CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
Bsp119I TTCGAA 1 cut(s) 2709
Bsp1286I GDGCHC 5 cut(s) 214, 222, 322, 1517, 1658
Bsp13I TCCGGA 1 cut(s) 346
Bsp1720I GCTNAGC 2 cut(s) 1335, 1623
BspANI GGCC 5 cut(s) 99, 374, 1631, 2250, 2790
BspCNI CTCAG 4 cut(s) 1282, 1348, 1615, 2692
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 5 cut(s) 83, 85, 296, 1935, 2111
BspLI GGNNCC 4 cut(s) 723, 891, 1494, 1655
BspOI GCTAGC 2 cut(s) 453, 2361
BspPI GGATC 8 cut(s) 272, 413, 739, 884, 897, 1134, 1480, 2476
BspQI GCTCTTC 1 cut(s) 1211
BspT104I TTCGAA 1 cut(s) 2709
BspTI CTTAAG 2 cut(s) 749, 2846
BsrBI CCGCTC 1 cut(s) 661
BsrDI GCAATG 1 cut(s) 2223
BsrFI RCCGGY 3 cut(s) 970, 1375, 2933
BssAI RCCGGY 3 cut(s) 970, 1375, 2933
BssECI CCNNGG 6 cut(s) 269, 337, 599, 1178, 1649, 2098
BssNI GRCGYC 2 cut(s) 38, 515
Bst6I CTCTTC 5 cut(s) 135, 1211, 1634, 1988, 2745
BstACI GRCGYC 2 cut(s) 38, 515
BstAFI CTTAAG 2 cut(s) 749, 2846
BstAPI GCANNNNNTGC 1 cut(s) 1883
BstBI TTCGAA 1 cut(s) 2709
BstDEI CTNAG 6 cut(s) 238, 1290, 1335, 1557, 1623, 2700
BstDSI CCRYGG 3 cut(s) 337, 599, 2098
BstF5I GGATG 5 cut(s) 193, 421, 1102, 1447, 2515
BstFNI CGCG 5 cut(s) 83, 85, 296, 1935, 2111
BstH2I RGCGCY 1 cut(s) 311
BstHHI GCGC 3 cut(s) 85, 298, 310
BstMAI GTCTC 6 cut(s) 251, 1070, 1109, 1719, 2059, 2668
BstNSI RCATGY 3 cut(s) 1437, 1534, 2389
BstSCI CCNGG 9 cut(s) 268, 556, 578, 699, 724, 1488, 1648, 1649, 1656
BstUI CGCG 5 cut(s) 83, 85, 296, 1935, 2111
BstV1I GCAGC 9 cut(s) 34, 134, 1160, 1564, 1724, 1870, 1879, 1889, 2678
BstV2I GAAGAC 5 cut(s) 1051, 1299, 1436, 2010, 2856
BstX2I RGATCY 3 cut(s) 744, 889, 1126
BstYI RGATCY 3 cut(s) 744, 889, 1126
BsuI GTATCC 1 cut(s) 179
BsuRI GGCC 5 cut(s) 99, 374, 1631, 2250, 2790
BtgI CCRYGG 3 cut(s) 337, 599, 2098
BtrI CACGTC 1 cut(s) 1071
BtsCI GGATG 5 cut(s) 193, 421, 1102, 1447, 2515
BtsIMutI CAGTG 8 cut(s) 209, 1116, 1265, 1308, 1361, 1761, 1783, 1913
CaiI CAGNNNCTG 4 cut(s) 34, 1166, 1360, 1883
CfoI GCGC 3 cut(s) 85, 298, 310
Cfr10I RCCGGY 3 cut(s) 970, 1375, 2933
Cfr13I GGNCC 2 cut(s) 569, 1976
Cfr9I CCCGGG 1 cut(s) 1649
CseI GACGC 8 cut(s) 46, 74, 220, 233, 523, 1152, 1430, 1941
Csp6I GTAC 5 cut(s) 18, 626, 1592, 2871, 2886
CspAI ACCGGT 1 cut(s) 1375
CviAII CATG 5 cut(s) 1434, 1531, 2246, 2386, 2465
CviQI GTAC 5 cut(s) 18, 626, 1592, 2871, 2886
DdeI CTNAG 6 cut(s) 238, 1290, 1335, 1557, 1623, 2700
DraI TTTAAA 1 cut(s) 60
EaeI YGGCCR 3 cut(s) 97, 372, 2248
Eam1104I CTCTTC 5 cut(s) 135, 1211, 1634, 1988, 2745
EarI CTCTTC 5 cut(s) 135, 1211, 1634, 1988, 2745
EciI GGCGGA 1 cut(s) 921
Ecl136II GAGCTC 2 cut(s) 220, 320
Eco24I GRGCYC 5 cut(s) 214, 222, 322, 1517, 1658
Eco47I GGWCC 2 cut(s) 569, 1976
Eco53kI GAGCTC 2 cut(s) 220, 320
Eco57I CTGAAG 5 cut(s) 211, 519, 851, 1347, 2744
Eco88I CYCGRG 7 cut(s) 215, 1177, 1649, 1916, 2057, 2853, 2900
EcoICRI GAGCTC 2 cut(s) 220, 320
EcoRI GAATTC 3 cut(s) 583, 883, 1804
EcoT22I ATGCAT 1 cut(s) 1435
EcoT38I GRGCYC 5 cut(s) 214, 222, 322, 1517, 1658
Esp3I CGTCTC 2 cut(s) 251, 2668
FaeI CATG 5 cut(s) 1437, 1534, 2249, 2389, 2468
FalI AAGNNNNNCTT 4 cut(s) 372, 404, 2742, 2774
FaqI GGGAC 4 cut(s) 447, 1075, 2047, 2323
FatI CATG 5 cut(s) 1433, 1530, 2245, 2385, 2464
FauI CCCGC 3 cut(s) 472, 654, 2382
FbaI TGATCA 1 cut(s) 2551
FokI GGATG 5 cut(s) 180, 428, 1089, 1434, 2522
FriOI GRGCYC 5 cut(s) 214, 222, 322, 1517, 1658
FspBI CTAG 9 cut(s) 134, 450, 525, 941, 1452, 2091, 2327, 2358, 2906
GlaI GCGC 3 cut(s) 84, 297, 309
GsaI CCCAGC 1 cut(s) 150
GsuI CTGGAG 3 cut(s) 1143, 1296, 2097
HaeII RGCGCY 1 cut(s) 311
HaeIII GGCC 5 cut(s) 99, 374, 1631, 2250, 2790
HgaI GACGC 8 cut(s) 46, 74, 220, 233, 523, 1152, 1430, 1941
HhaI GCGC 3 cut(s) 85, 298, 310
Hin1I GRCGYC 2 cut(s) 38, 515
Hin1II CATG 5 cut(s) 1437, 1534, 2249, 2389, 2468
Hin6I GCGC 3 cut(s) 83, 296, 308
HinP1I GCGC 3 cut(s) 83, 296, 308
HincII GTYRAC 1 cut(s) 1506
HindII GTYRAC 1 cut(s) 1506
HphI GGTGA 9 cut(s) 170, 649, 725, 779, 799, 938, 2891, 2933, 2948
Hpy166II GTNNAC 6 cut(s) 1256, 1265, 1388, 1506, 1594, 2924
Hpy8I GTNNAC 6 cut(s) 1256, 1265, 1388, 1506, 1594, 2924
Hpy99I CGWCG 9 cut(s) 90, 162, 236, 517, 625, 1072, 1935, 2412, 2435
HpyAV CCTTC 2 cut(s) 1034, 1834
HpyCH4IV ACGT 4 cut(s) 117, 1070, 1502, 2271
HpyF3I CTNAG 6 cut(s) 238, 1290, 1335, 1557, 1623, 2700
HpySE526I ACGT 4 cut(s) 117, 1070, 1502, 2271
Hsp92I GRCGYC 2 cut(s) 38, 515
Hsp92II CATG 5 cut(s) 1437, 1534, 2249, 2389, 2468
HspAI GCGC 3 cut(s) 83, 296, 308
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 970
KroNI GCCGGC 1 cut(s) 972
Ksp22I TGATCA 1 cut(s) 2551
LguI GCTCTTC 1 cut(s) 1211
LmnI GCTCC 6 cut(s) 349, 658, 721, 946, 1162, 1653
Lsp1109I GCAGC 9 cut(s) 34, 134, 1160, 1564, 1724, 1870, 1879, 1889, 2678
LweI GCATC 4 cut(s) 1420, 1864, 2062, 2626
MaeI CTAG 9 cut(s) 134, 450, 525, 941, 1452, 2091, 2327, 2358, 2906
MaeII ACGT 4 cut(s) 117, 1070, 1502, 2271
MbiI CCGCTC 1 cut(s) 661
MfeI CAATTG 1 cut(s) 480
MflI RGATCY 3 cut(s) 744, 889, 1126
MhlI GDGCHC 5 cut(s) 214, 222, 322, 1517, 1658
MlyI GAGTC 6 cut(s) 25, 1041, 1618, 1651, 2152, 2234
MmeI TCCRAC 3 cut(s) 181, 536, 2094
Mph1103I ATGCAT 1 cut(s) 1435
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 970
MslI CAYNNNNRTG 3 cut(s) 1246, 2250, 2590
MspA1I CMGCKG 3 cut(s) 1883, 2501, 2669
MspCI CTTAAG 2 cut(s) 749, 2846
MspR9I CCNGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
MunI CAATTG 1 cut(s) 480
Mva1269I GAATGC 1 cut(s) 2606
MvnI CGCG 5 cut(s) 83, 85, 296, 1935, 2111
NaeI GCCGGC 1 cut(s) 972
NciI CCSGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
NgoMIV GCCGGC 1 cut(s) 970
NheI GCTAGC 2 cut(s) 449, 2357
NlaIII CATG 5 cut(s) 1437, 1534, 2249, 2389, 2468
NlaIV GGNNCC 4 cut(s) 723, 891, 1494, 1655
NmeAIII GCCGAG 2 cut(s) 1713, 2875
NmuCI GTSAC 4 cut(s) 926, 2237, 2583, 2879
NsiI ATGCAT 1 cut(s) 1435
NspI RCATGY 3 cut(s) 1437, 1534, 2389
NspV TTCGAA 1 cut(s) 2709
PaeI GCATGC 2 cut(s) 1437, 2389
PaeR7I CTCGAG 3 cut(s) 215, 2853, 2900
PciSI GCTCTTC 1 cut(s) 1211
PcsI WCGNNNNNNNCGW 4 cut(s) 509, 736, 1508, 2318
PctI GAATGC 1 cut(s) 2606
PdiI GCCGGC 1 cut(s) 972
PflMI CCANNNNNTGG 2 cut(s) 1166, 2617
PinAI ACCGGT 1 cut(s) 1375
PleI GAGTC 6 cut(s) 25, 1041, 1617, 1650, 2151, 2234
PpsI GAGTC 6 cut(s) 25, 1041, 1617, 1650, 2151, 2234
Psp124BI GAGCTC 2 cut(s) 222, 322
Psp1406I AACGTT 1 cut(s) 1502
PspFI CCCAGC 1 cut(s) 146
PspN4I GGNNCC 4 cut(s) 723, 891, 1494, 1655
PspPI GGNCC 2 cut(s) 569, 1976
PspXI VCTCGAGB 3 cut(s) 215, 2853, 2900
PstNI CAGNNNCTG 4 cut(s) 34, 1166, 1360, 1883
PsuI RGATCY 3 cut(s) 744, 889, 1126
PvuII CAGCTG 1 cut(s) 2669
RsaI GTAC 5 cut(s) 19, 627, 1593, 2872, 2887
RsaNI GTAC 5 cut(s) 18, 626, 1592, 2871, 2886
RseI CAYNNNNRTG 3 cut(s) 1246, 2250, 2590
SacI GAGCTC 2 cut(s) 222, 322
SapI GCTCTTC 1 cut(s) 1211
Sau96I GGNCC 2 cut(s) 569, 1976
SchI GAGTC 6 cut(s) 25, 1041, 1618, 1651, 2152, 2234
ScrFI CCNGG 9 cut(s) 270, 558, 580, 701, 726, 1490, 1650, 1651, 1658
SduI GDGCHC 5 cut(s) 214, 222, 322, 1517, 1658
SfaNI GCATC 4 cut(s) 1420, 1864, 2062, 2626
Sfr274I CTCGAG 3 cut(s) 215, 2853, 2900
SfuI TTCGAA 1 cut(s) 2709
SgrAI CRCCGGYG 1 cut(s) 2933
SinI GGWCC 2 cut(s) 569, 1976
SlaI CTCGAG 3 cut(s) 215, 2853, 2900
SmaI CCCGGG 1 cut(s) 1651
SmiMI CAYNNNNRTG 3 cut(s) 1246, 2250, 2590
SmlI CTYRAG 7 cut(s) 215, 321, 749, 2770, 2846, 2853, 2900
SmoI CTYRAG 7 cut(s) 215, 321, 749, 2770, 2846, 2853, 2900
SphI GCATGC 2 cut(s) 1437, 2389
SspMI CTAG 9 cut(s) 134, 450, 525, 941, 1452, 2091, 2327, 2358, 2906
SstI GAGCTC 2 cut(s) 222, 322
StyD4I CCNGG 9 cut(s) 268, 556, 578, 699, 724, 1488, 1648, 1649, 1656
TaiI ACGT 4 cut(s) 120, 1073, 1505, 2274
TaqII GACCGA 2 cut(s) 1682, 1865
TauI GCSGC 5 cut(s) 83, 308, 906, 1883, 2501
TscAI CASTG 8 cut(s) 209, 1116, 1265, 1308, 1361, 1761, 1783, 1913
TseFI GTSAC 4 cut(s) 926, 2237, 2583, 2879
TseI GCWGC 9 cut(s) 47, 122, 1148, 1552, 1737, 1877, 1883, 1892, 2666
Tsp45I GTSAC 4 cut(s) 926, 2237, 2583, 2879
TspDTI ATGAA 4 cut(s) 1436, 1448, 2349, 2925
TspGWI ACGGA 6 cut(s) 1033, 2087, 2136, 2225, 2522, 2692
TspMI CCCGGG 1 cut(s) 1649
TspRI CASTG 8 cut(s) 209, 1116, 1265, 1308, 1361, 1761, 1783, 1913
Van91I CCANNNNNTGG 2 cut(s) 1166, 2617
Vha464I CTTAAG 2 cut(s) 749, 2846
VpaK11BI GGWCC 2 cut(s) 569, 1976
XapI RAATTY 7 cut(s) 547, 583, 778, 883, 1804, 2086, 2396
XceI RCATGY 3 cut(s) 1437, 1534, 2389
XhoI CTCGAG 3 cut(s) 215, 2853, 2900
XmaI CCCGGG 1 cut(s) 1649
XspI CTAG 9 cut(s) 134, 450, 525, 941, 1452, 2091, 2327, 2358, 2906
Zsp2I ATGCAT 1 cut(s) 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.