chaperone protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57710 |
| fragaria_vesca | FvH4_4g09820 |
| malus_domestica | MD13G1261900.v1.1 MD16G1264200.v1.1 |
| prunus_persica | Prupe.1G095200_v2.0.a1 Prupe.1G095200_v2.0.a1 |
| pyrus_communis | pycom13g24720 pycom16g23290 |
| rosa_chinensis | RchiOBHm_Chr4g0404601 |
| rosa_laevigata | RLG00000008920 |
| rosa_multiflora | Rmu_sc0002699.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00348750 |
| rosa_rugosa | Rorug04G0047700 |
| rosa_samantha | Rh4AG123800 Rh4BG117200 Rh4CG131900 Rh4DG116700 |
| rosa_wichuraiana | Rw4G010030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1021 |
| Acc36I | ACCTGC | 1 cut(s) | 1021 |
| AccB1I | GGYRCC | 3 cut(s) | 580, 1161, 3079 |
| AccBSI | CCGCTC | 2 cut(s) | 8, 244 |
| AccI | GTMKAC | 1 cut(s) | 85 |
| AccII | CGCG | 2 cut(s) | 342, 2286 |
| AclI | AACGTT | 1 cut(s) | 32 |
| AclWI | GGATC | 8 cut(s) | 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863 |
| AcoI | YGGCCR | 5 cut(s) | 97, 306, 1114, 1765, 2335 |
| AcsI | RAATTY | 4 cut(s) | 184, 598, 913, 1784 |
| AcuI | CTGAAG | 3 cut(s) | 211, 816, 827 |
| AcvI | CACGTG | 1 cut(s) | 118 |
| AcyI | GRCGYC | 1 cut(s) | 107 |
| AfaI | GTAC | 4 cut(s) | 1399, 1534, 1607, 2709 |
| AflIII | ACRYGT | 4 cut(s) | 115, 1382, 1651, 2043 |
| AjnI | CCWGG | 3 cut(s) | 994, 1000, 2064 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 707, 739, 2334, 2366 |
| AleI | CACNNNNGTG | 1 cut(s) | 2975 |
| Alw21I | GWGCWC | 6 cut(s) | 214, 222, 325, 393, 765, 1688 |
| Alw26I | GTCTC | 8 cut(s) | 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088 |
| AlwI | GGATC | 8 cut(s) | 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 496, 631, 1973, 2555 |
| Ama87I | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| ApoI | RAATTY | 4 cut(s) | 184, 598, 913, 1784 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 253, 285 |
| AseI | ATTAAT | 1 cut(s) | 2262 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2922 |
| AspA2I | CCTAGG | 1 cut(s) | 2543 |
| AspLEI | GCGC | 2 cut(s) | 339, 1815 |
| AspS9I | GGNCC | 7 cut(s) | 572, 800, 998, 2062, 2121, 2403, 2532 |
| AsuC2I | CCSGG | 7 cut(s) | 273, 904, 922, 2713, 2714, 2878, 3041 |
| AsuHPI | GGTGA | 9 cut(s) | 170, 323, 959, 1166, 1293, 1780, 2615, 2837, 3013 |
| AsuNHI | GCTAGC | 1 cut(s) | 1220 |
| AvaI | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| AvaII | GGWCC | 2 cut(s) | 998, 2121 |
| AvrII | CCTAGG | 1 cut(s) | 2543 |
| AxyI | CCTNAGG | 1 cut(s) | 744 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2691, 2724 |
| BalI | TGGCCA | 1 cut(s) | 1767 |
| BamHI | GGATCC | 2 cut(s) | 1272, 1363 |
| BanI | GGYRCC | 3 cut(s) | 580, 1161, 3079 |
| BanII | GRGCYC | 6 cut(s) | 214, 222, 285, 325, 393, 765 |
| BbrPI | CACGTG | 1 cut(s) | 118 |
| BbsI | GAAGAC | 1 cut(s) | 2532 |
| Bbv12I | GWGCWC | 6 cut(s) | 214, 222, 325, 393, 765, 1688 |
| BbvCI | CCTCAGC | 1 cut(s) | 2598 |
| BccI | CCATC | 7 cut(s) | 296, 1327, 1717, 2083, 2804, 3011, 3080 |
| BceAI | ACGGC | 6 cut(s) | 112, 362, 515, 2322, 2487, 2632 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 630, 664 |
| BciT130I | CCWGG | 3 cut(s) | 996, 1002, 2066 |
| BcnI | CCSGG | 7 cut(s) | 273, 904, 922, 2713, 2714, 2878, 3041 |
| BcoDI | GTCTC | 8 cut(s) | 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088 |
| BfaI | CTAG | 8 cut(s) | 453, 462, 1007, 1221, 2487, 2544, 2888, 3057 |
| BfmI | CTRYAG | 3 cut(s) | 200, 620, 1202 |
| BfoI | RGCGCY | 1 cut(s) | 340 |
| BfuAI | ACCTGC | 1 cut(s) | 1021 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 570, 1976, 2898 |
| BlnI | CCTAGG | 1 cut(s) | 2543 |
| Bme18I | GGWCC | 2 cut(s) | 998, 2121 |
| BmeT110I | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| BmgT120I | GGNCC | 7 cut(s) | 572, 800, 998, 2062, 2121, 2403, 2532 |
| BmrI | ACTGGG | 3 cut(s) | 713, 1548, 2123 |
| BmsI | GCATC | 8 cut(s) | 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072 |
| BmtI | GCTAGC | 1 cut(s) | 1224 |
| BmuI | ACTGGG | 3 cut(s) | 713, 1548, 2123 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1348, 2664 |
| BpiI | GAAGAC | 1 cut(s) | 2532 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3036, 3068 |
| BpmI | CTGGAG | 2 cut(s) | 236, 260 |
| Bpu10I | CCTNAGC | 2 cut(s) | 324, 2598 |
| BpuEI | CTTGAG | 3 cut(s) | 787, 2273, 2933 |
| BpuMI | CCSGG | 7 cut(s) | 273, 904, 922, 2713, 2714, 2878, 3041 |
| Bsa29I | ATCGAT | 1 cut(s) | 2139 |
| BsaAI | YACGTR | 1 cut(s) | 118 |
| BsaBI | GATNNNNATC | 3 cut(s) | 855, 1197, 2661 |
| BsaHI | GRCGYC | 1 cut(s) | 107 |
| BsaI | GGTCTC | 1 cut(s) | 893 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1934, 1964 |
| Bse118I | RCCGGY | 2 cut(s) | 146, 1116 |
| Bse21I | CCTNAGG | 1 cut(s) | 744 |
| Bse3DI | GCAATG | 2 cut(s) | 1400, 2014 |
| Bse8I | GATNNNNATC | 3 cut(s) | 855, 1197, 2661 |
| BseBI | CCWGG | 3 cut(s) | 996, 1002, 2066 |
| BseCI | ATCGAT | 1 cut(s) | 2139 |
| BseGI | GGATG | 5 cut(s) | 539, 2367, 2599, 2860, 2937 |
| BseJI | GATNNNNATC | 3 cut(s) | 855, 1197, 2661 |
| BseMI | GCAATG | 2 cut(s) | 1400, 2014 |
| BseMII | CTCAG | 8 cut(s) | 5, 338, 735, 1299, 1437, 1505, 1673, 2589 |
| BseRI | GAGGAG | 3 cut(s) | 784, 848, 1002 |
| BseX3I | CGGCCG | 1 cut(s) | 1114 |
| BseYI | CCCAGC | 2 cut(s) | 631, 2027 |
| Bsh1236I | CGCG | 2 cut(s) | 342, 2286 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1117, 3034 |
| BshNI | GGYRCC | 3 cut(s) | 580, 1161, 3079 |
| BshVI | ATCGAT | 1 cut(s) | 2139 |
| BsiEI | CGRYCG | 2 cut(s) | 1117, 3034 |
| BsiHKAI | GWGCWC | 6 cut(s) | 214, 222, 325, 393, 765, 1688 |
| BsiHKCI | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| BslFI | GGGAC | 5 cut(s) | 255, 450, 666, 1147, 1684 |
| BsmAI | GTCTC | 8 cut(s) | 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088 |
| BsmBI | CGTCTC | 2 cut(s) | 1020, 2672 |
| BsmFI | GGGAC | 5 cut(s) | 255, 450, 666, 1147, 1684 |
| BsmI | GAATGC | 1 cut(s) | 1510 |
| Bso31I | GGTCTC | 1 cut(s) | 893 |
| BsoBI | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| Bsp1286I | GDGCHC | 7 cut(s) | 214, 222, 285, 325, 393, 765, 1688 |
| Bsp1407I | TGTACA | 2 cut(s) | 1397, 1605 |
| BspCNI | CTCAG | 8 cut(s) | 6, 337, 736, 1298, 1438, 1504, 1674, 2590 |
| BspDI | ATCGAT | 1 cut(s) | 2139 |
| BspFNI | CGCG | 2 cut(s) | 342, 2286 |
| BspMAI | CTGCAG | 2 cut(s) | 204, 624 |
| BspMI | ACCTGC | 1 cut(s) | 1021 |
| BspOI | GCTAGC | 1 cut(s) | 1224 |
| BspPI | GGATC | 8 cut(s) | 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863 |
| BspQI | GCTCTTC | 1 cut(s) | 2447 |
| BspT107I | GGYRCC | 3 cut(s) | 580, 1161, 3079 |
| BspTNI | GGTCTC | 1 cut(s) | 893 |
| BsrBI | CCGCTC | 2 cut(s) | 8, 244 |
| BsrDI | GCAATG | 2 cut(s) | 1400, 2014 |
| BsrFI | RCCGGY | 2 cut(s) | 146, 1116 |
| BsrGI | TGTACA | 2 cut(s) | 1397, 1605 |
| BssAI | RCCGGY | 2 cut(s) | 146, 1116 |
| BssNI | GRCGYC | 1 cut(s) | 107 |
| BssT1I | CCWWGG | 3 cut(s) | 1437, 2543, 2959 |
| Bst2UI | CCWGG | 3 cut(s) | 996, 1002, 2066 |
| Bst4CI | ACNGT | 6 cut(s) | 580, 1987, 2072, 2197, 2221, 2644 |
| Bst6I | CTCTTC | 6 cut(s) | 508, 663, 704, 1369, 1562, 2447 |
| BstACI | GRCGYC | 1 cut(s) | 107 |
| BstAUI | TGTACA | 2 cut(s) | 1397, 1605 |
| BstBAI | YACGTR | 1 cut(s) | 118 |
| BstDSI | CCRYGG | 4 cut(s) | 94, 340, 576, 2185 |
| BstF5I | GGATG | 5 cut(s) | 539, 2367, 2599, 2860, 2937 |
| BstFNI | CGCG | 2 cut(s) | 342, 2286 |
| BstH2I | RGCGCY | 1 cut(s) | 340 |
| BstHHI | GCGC | 2 cut(s) | 339, 1815 |
| BstMAI | GTCTC | 8 cut(s) | 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088 |
| BstMCI | CGRYCG | 2 cut(s) | 1117, 3034 |
| BstNI | CCWGG | 3 cut(s) | 996, 1002, 2066 |
| BstNSI | RCATGY | 5 cut(s) | 168, 1386, 1655, 1840, 2047 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1348, 2664 |
| BstSFI | CTRYAG | 3 cut(s) | 200, 620, 1202 |
| BstUI | CGCG | 2 cut(s) | 342, 2286 |
| BstV2I | GAAGAC | 1 cut(s) | 2532 |
| BstX2I | RGATCY | 4 cut(s) | 1198, 1272, 1363, 2868 |
| BstYI | RGATCY | 4 cut(s) | 1198, 1272, 1363, 2868 |
| BstZI | CGGCCG | 1 cut(s) | 1114 |
| Bsu15I | ATCGAT | 1 cut(s) | 2139 |
| Bsu36I | CCTNAGG | 1 cut(s) | 744 |
| BsuTUI | ATCGAT | 1 cut(s) | 2139 |
| BtgI | CCRYGG | 4 cut(s) | 94, 340, 576, 2185 |
| BtsCI | GGATG | 5 cut(s) | 539, 2367, 2599, 2860, 2937 |
| BtsI | GCAGTG | 4 cut(s) | 209, 252, 1065, 1215 |
| BveI | ACCTGC | 1 cut(s) | 1021 |
| CaiI | CAGNNNCTG | 4 cut(s) | 496, 631, 1973, 2555 |
| CfoI | GCGC | 2 cut(s) | 339, 1815 |
| Cfr10I | RCCGGY | 2 cut(s) | 146, 1116 |
| Cfr13I | GGNCC | 7 cut(s) | 572, 800, 998, 2062, 2121, 2403, 2532 |
| Cfr42I | CCGCGG | 1 cut(s) | 343 |
| Cfr9I | CCCGGG | 1 cut(s) | 2712 |
| ClaI | ATCGAT | 1 cut(s) | 2139 |
| CseI | GACGC | 4 cut(s) | 43, 115, 502, 1555 |
| Csp6I | GTAC | 4 cut(s) | 1398, 1533, 1606, 2708 |
| CviQI | GTAC | 4 cut(s) | 1398, 1533, 1606, 2708 |
| EaeI | YGGCCR | 5 cut(s) | 97, 306, 1114, 1765, 2335 |
| EagI | CGGCCG | 1 cut(s) | 1114 |
| Eam1104I | CTCTTC | 6 cut(s) | 508, 663, 704, 1369, 1562, 2447 |
| EarI | CTCTTC | 6 cut(s) | 508, 663, 704, 1369, 1562, 2447 |
| EciI | GGCGGA | 2 cut(s) | 146, 551 |
| Ecl136II | GAGCTC | 5 cut(s) | 212, 220, 323, 391, 763 |
| EclXI | CGGCCG | 1 cut(s) | 1114 |
| Eco130I | CCWWGG | 3 cut(s) | 1437, 2543, 2959 |
| Eco147I | AGGCCT | 1 cut(s) | 2542 |
| Eco24I | GRGCYC | 6 cut(s) | 214, 222, 285, 325, 393, 765 |
| Eco31I | GGTCTC | 1 cut(s) | 893 |
| Eco47I | GGWCC | 2 cut(s) | 998, 2121 |
| Eco52I | CGGCCG | 1 cut(s) | 1114 |
| Eco53kI | GAGCTC | 5 cut(s) | 212, 220, 323, 391, 763 |
| Eco57I | CTGAAG | 3 cut(s) | 211, 816, 827 |
| Eco72I | CACGTG | 1 cut(s) | 118 |
| Eco81I | CCTNAGG | 1 cut(s) | 744 |
| Eco88I | CYCGRG | 4 cut(s) | 392, 424, 2712, 2932 |
| EcoICRI | GAGCTC | 5 cut(s) | 212, 220, 323, 391, 763 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2403 |
| EcoRI | GAATTC | 2 cut(s) | 184, 1784 |
| EcoRII | CCWGG | 3 cut(s) | 994, 1000, 2064 |
| EcoT14I | CCWWGG | 3 cut(s) | 1437, 2543, 2959 |
| EcoT22I | ATGCAT | 2 cut(s) | 170, 1806 |
| EcoT38I | GRGCYC | 6 cut(s) | 214, 222, 285, 325, 393, 765 |
| ErhI | CCWWGG | 3 cut(s) | 1437, 2543, 2959 |
| Esp3I | CGTCTC | 2 cut(s) | 1020, 2672 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2421, 2453 |
| FaqI | GGGAC | 5 cut(s) | 255, 450, 666, 1147, 1684 |
| FauI | CCCGC | 5 cut(s) | 73, 438, 475, 1044, 1398 |
| FblI | GTMKAC | 1 cut(s) | 85 |
| FokI | GGATG | 5 cut(s) | 526, 2354, 2606, 2867, 2924 |
| FriOI | GRGCYC | 6 cut(s) | 214, 222, 285, 325, 393, 765 |
| FspBI | CTAG | 8 cut(s) | 453, 462, 1007, 1221, 2487, 2544, 2888, 3057 |
| GlaI | GCGC | 2 cut(s) | 338, 1814 |
| GsaI | CCCAGC | 2 cut(s) | 635, 2031 |
| GsuI | CTGGAG | 2 cut(s) | 236, 260 |
| HaeII | RGCGCY | 1 cut(s) | 340 |
| HgaI | GACGC | 4 cut(s) | 43, 115, 502, 1555 |
| HhaI | GCGC | 2 cut(s) | 339, 1815 |
| Hin1I | GRCGYC | 1 cut(s) | 107 |
| Hin6I | GCGC | 2 cut(s) | 337, 1813 |
| HinP1I | GCGC | 2 cut(s) | 337, 1813 |
| HincII | GTYRAC | 3 cut(s) | 36, 86, 2517 |
| HindII | GTYRAC | 3 cut(s) | 36, 86, 2517 |
| HindIII | AAGCTT | 1 cut(s) | 1922 |
| HpaI | GTTAAC | 2 cut(s) | 36, 2517 |
| HphI | GGTGA | 9 cut(s) | 170, 323, 959, 1166, 1293, 1780, 2615, 2837, 3013 |
| Hpy166II | GTNNAC | 3 cut(s) | 36, 86, 2517 |
| Hpy188III | TCNNGA | 9 cut(s) | 58, 215, 239, 416, 651, 766, 938, 1239, 2872 |
| Hpy8I | GTNNAC | 3 cut(s) | 36, 86, 2517 |
| Hpy99I | CGWCG | 3 cut(s) | 90, 109, 2990 |
| HpyAV | CCTTC | 5 cut(s) | 791, 833, 871, 1188, 1851 |
| HpyCH4III | ACNGT | 6 cut(s) | 580, 1987, 2072, 2197, 2221, 2644 |
| HpyCH4IV | ACGT | 3 cut(s) | 32, 117, 2155 |
| HpySE526I | ACGT | 3 cut(s) | 32, 117, 2155 |
| Hsp92I | GRCGYC | 1 cut(s) | 107 |
| HspAI | GCGC | 2 cut(s) | 337, 1813 |
| KroI | GCCGGC | 1 cut(s) | 1116 |
| KroNI | GCCGGC | 1 cut(s) | 1118 |
| KspAI | GTTAAC | 2 cut(s) | 36, 2517 |
| KspI | CCGCGG | 1 cut(s) | 343 |
| LguI | GCTCTTC | 1 cut(s) | 2447 |
| LmnI | GCTCC | 9 cut(s) | 217, 241, 280, 635, 739, 967, 2153, 3036, 3057 |
| LweI | GCATC | 8 cut(s) | 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072 |
| MaeI | CTAG | 8 cut(s) | 453, 462, 1007, 1221, 2487, 2544, 2888, 3057 |
| MaeII | ACGT | 3 cut(s) | 32, 117, 2155 |
| MaeIII | GTNAC | 7 cut(s) | 947, 1299, 1777, 1860, 1987, 2603, 2692 |
| MbiI | CCGCTC | 2 cut(s) | 8, 244 |
| MfeI | CAATTG | 4 cut(s) | 1215, 1889, 2304, 2509 |
| MflI | RGATCY | 4 cut(s) | 1198, 1272, 1363, 2868 |
| MhlI | GDGCHC | 7 cut(s) | 214, 222, 285, 325, 393, 765, 1688 |
| MlsI | TGGCCA | 1 cut(s) | 1767 |
| MluNI | TGGCCA | 1 cut(s) | 1767 |
| MlyI | GAGTC | 4 cut(s) | 277, 1666, 2321, 2999 |
| MmeI | TCCRAC | 3 cut(s) | 1048, 1604, 2148 |
| Mox20I | TGGCCA | 1 cut(s) | 1767 |
| Mph1103I | ATGCAT | 2 cut(s) | 170, 1806 |
| MroNI | GCCGGC | 1 cut(s) | 1116 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2922 |
| MscI | TGGCCA | 1 cut(s) | 1767 |
| MseI | TTAA | 9 cut(s) | 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2975, 3068 |
| Msp20I | TGGCCA | 1 cut(s) | 1767 |
| MspA1I | CMGCKG | 6 cut(s) | 342, 518, 631, 805, 1696, 2460 |
| MunI | CAATTG | 4 cut(s) | 1215, 1889, 2304, 2509 |
| Mva1269I | GAATGC | 1 cut(s) | 1510 |
| MvaI | CCWGG | 3 cut(s) | 996, 1002, 2066 |
| MvnI | CGCG | 2 cut(s) | 342, 2286 |
| NaeI | GCCGGC | 1 cut(s) | 1118 |
| NciI | CCSGG | 7 cut(s) | 273, 904, 922, 2713, 2714, 2878, 3041 |
| NgoMIV | GCCGGC | 1 cut(s) | 1116 |
| NheI | GCTAGC | 1 cut(s) | 1220 |
| NmeAIII | GCCGAG | 1 cut(s) | 233 |
| NmuCI | GTSAC | 6 cut(s) | 947, 1299, 1777, 1987, 2603, 2692 |
| NsiI | ATGCAT | 2 cut(s) | 170, 1806 |
| NspI | RCATGY | 5 cut(s) | 168, 1386, 1655, 1840, 2047 |
| OliI | CACNNNNGTG | 1 cut(s) | 2975 |
| PaeI | GCATGC | 2 cut(s) | 168, 1840 |
| PaeR7I | CTCGAG | 1 cut(s) | 392 |
| PaqCI | CACCTGC | 1 cut(s) | 1021 |
| PceI | AGGCCT | 1 cut(s) | 2542 |
| PciI | ACATGT | 3 cut(s) | 1382, 1651, 2043 |
| PciSI | GCTCTTC | 1 cut(s) | 2447 |
| PctI | GAATGC | 1 cut(s) | 1510 |
| PdiI | GCCGGC | 1 cut(s) | 1118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2922 |
| Ple19I | CGATCG | 1 cut(s) | 3034 |
| PleI | GAGTC | 4 cut(s) | 276, 1666, 2321, 2998 |
| PmaCI | CACGTG | 1 cut(s) | 118 |
| PmlI | CACGTG | 1 cut(s) | 118 |
| PpsI | GAGTC | 4 cut(s) | 276, 1666, 2321, 2998 |
| Ppu21I | YACGTR | 1 cut(s) | 118 |
| PscI | ACATGT | 3 cut(s) | 1382, 1651, 2043 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1348, 2664 |
| PshBI | ATTAAT | 1 cut(s) | 2262 |
| Psp124BI | GAGCTC | 5 cut(s) | 214, 222, 325, 393, 765 |
| Psp1406I | AACGTT | 1 cut(s) | 32 |
| Psp6I | CCWGG | 3 cut(s) | 994, 1000, 2064 |
| PspCI | CACGTG | 1 cut(s) | 118 |
| PspFI | CCCAGC | 2 cut(s) | 631, 2027 |
| PspGI | CCWGG | 3 cut(s) | 994, 1000, 2064 |
| PspPI | GGNCC | 7 cut(s) | 572, 800, 998, 2062, 2121, 2403, 2532 |
| PspXI | VCTCGAGB | 1 cut(s) | 392 |
| PstI | CTGCAG | 2 cut(s) | 204, 624 |
| PstNI | CAGNNNCTG | 4 cut(s) | 496, 631, 1973, 2555 |
| PsuI | RGATCY | 4 cut(s) | 1198, 1272, 1363, 2868 |
| PvuI | CGATCG | 1 cut(s) | 3034 |
| PvuII | CAGCTG | 1 cut(s) | 2460 |
| RsaI | GTAC | 4 cut(s) | 1399, 1534, 1607, 2709 |
| RsaNI | GTAC | 4 cut(s) | 1398, 1533, 1606, 2708 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2975, 3068 |
| SacI | GAGCTC | 5 cut(s) | 214, 222, 325, 393, 765 |
| SacII | CCGCGG | 1 cut(s) | 343 |
| SalI | GTCGAC | 1 cut(s) | 84 |
| SapI | GCTCTTC | 1 cut(s) | 2447 |
| SaqAI | TTAA | 9 cut(s) | 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625 |
| Sau96I | GGNCC | 7 cut(s) | 572, 800, 998, 2062, 2121, 2403, 2532 |
| SchI | GAGTC | 4 cut(s) | 277, 1666, 2321, 2999 |
| SduI | GDGCHC | 7 cut(s) | 214, 222, 285, 325, 393, 765, 1688 |
| SfaNI | GCATC | 8 cut(s) | 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072 |
| SfcI | CTRYAG | 3 cut(s) | 200, 620, 1202 |
| Sfr274I | CTCGAG | 1 cut(s) | 392 |
| Sfr303I | CCGCGG | 1 cut(s) | 343 |
| SgrBI | CCGCGG | 1 cut(s) | 343 |
| SinI | GGWCC | 2 cut(s) | 998, 2121 |
| SlaI | CTCGAG | 1 cut(s) | 392 |
| SmaI | CCCGGG | 1 cut(s) | 2714 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2975, 3068 |
| SmlI | CTYRAG | 4 cut(s) | 392, 766, 2252, 2948 |
| SmoI | CTYRAG | 4 cut(s) | 392, 766, 2252, 2948 |
| SphI | GCATGC | 2 cut(s) | 168, 1840 |
| SseBI | AGGCCT | 1 cut(s) | 2542 |
| SspMI | CTAG | 8 cut(s) | 453, 462, 1007, 1221, 2487, 2544, 2888, 3057 |
| SstI | GAGCTC | 5 cut(s) | 214, 222, 325, 393, 765 |
| StuI | AGGCCT | 1 cut(s) | 2542 |
| StyI | CCWWGG | 3 cut(s) | 1437, 2543, 2959 |
| TaaI | ACNGT | 6 cut(s) | 580, 1987, 2072, 2197, 2221, 2644 |
| TaiI | ACGT | 3 cut(s) | 35, 120, 2158 |
| TatI | WGTACW | 3 cut(s) | 1397, 1532, 1605 |
| Tru1I | TTAA | 9 cut(s) | 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625 |
| Tru9I | TTAA | 9 cut(s) | 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625 |
| TseFI | GTSAC | 6 cut(s) | 947, 1299, 1777, 1987, 2603, 2692 |
| Tsp45I | GTSAC | 6 cut(s) | 947, 1299, 1777, 1987, 2603, 2692 |
| TspGWI | ACGGA | 2 cut(s) | 103, 2174 |
| TspMI | CCCGGG | 1 cut(s) | 2712 |
| VpaK11BI | GGWCC | 2 cut(s) | 998, 2121 |
| VspI | ATTAAT | 1 cut(s) | 2262 |
| XapI | RAATTY | 4 cut(s) | 184, 598, 913, 1784 |
| XceI | RCATGY | 5 cut(s) | 168, 1386, 1655, 1840, 2047 |
| XhoI | CTCGAG | 1 cut(s) | 392 |
| XmaI | CCCGGG | 1 cut(s) | 2712 |
| XmaJI | CCTAGG | 1 cut(s) | 2543 |
| XmiI | GTMKAC | 1 cut(s) | 85 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2922 |
| XspI | CTAG | 8 cut(s) | 453, 462, 1007, 1221, 2487, 2544, 2888, 3057 |
| Zsp2I | ATGCAT | 2 cut(s) | 170, 1806 |