AT5G60210

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24243009 .. 24247888
4880 bp
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UTR
Exon/CDS
Intron
AT5G60210.6

Sequence Viewer

Length: 1695 bp
ATGCAGACCCAAAAGGCAAGAAATGGATCTCCGGATGTTCCTAAGAAGGTGTCTCCTCGAGCTGCTCGGCCACTGAAGATCGCAGCGCTAGAGCCTGAATCTTCTTCATCTCCTATCTCAGCTACTAACAGAACACCAAAGGATAAGAGTCCAAACGTTCTAAATCGTAGGTCTCCTCGAAGCCCTGTCTCTGAGAAGAAGAGGCCGAGTAGAATAACGGAGCTAGAGTTGCTAGTCTCGCAGCTTCAGGAGGAGCTAAAAAAGGCGAAAGATCAAATCTCAGTGTCTGAAACATCAAAGAAGCAAGCAGAACAAGAAGCAGAGGAGTCCAGGAAACAGCTCCAAGAAGTTTCTTCTAAGCTTGAGGAGAGCCAGAATCAGTTTGTGGAAACTTCAGCCTTGGAAGAAGAAACCGATAAAACCGGTTCTCTTGTTTTTCAAAGTGTATCTCAGGAGTGTGATTGGGAGTTTAGTGCTACTGCTGGTGAAAGAGCAGGATTAGCTGCTGTTGCTCATGAGATCCGACAACTCAAGCTTCAGATTGAGATGGTGGCTTCTTCTGAAGCTGGTCATGTGAAACAAGCTGAGTTGTATAACTCAGAGGTTCAACTTTTGAGAGGAAACTTAATGGACACGCTTTTCCACGTCGAGAATTTCAGGAACCAACTTAAGGACTGTGAGATATCAGAAGCTGAAACCGAGGCTTTAGCCACTGAAACTCTTAGGCAATTGGAGAATGCGAAAAAGGCAGTAGAAGAACTGAAGTCAGATGGCACAAAAGCTGTTGAGAGTTACAAGAAGATGGCTGTGGAGCTTGAACAGTCAAAATCAAGGATGGTATGGCTTGAAGCTCTTGTGAATAAACTTCAGAACAATCCAGCAGATTTGGAAAACCACGAAATCCTGCTTAAAGACTATGAAAGTTTGAGACGTGGGGAATCAAATGAGATGGATGAAGAAGTATCTTCCTTAAGATGTGAGGTAGAGCGACTGAGAGCAGCTCTAGAAGCTTCTGATAAAAAAGACCAAGAAGGTAATGTAGAGGCTTCTTCTCGGTTACGGATACAAGCTGAACTCCAGTCTGAATTAAAGATTGCTAAATCTGAGATAGACGAGCTAAAGGCGAGGTTGATGGACAAAGAAACAGAATTACAGTTTATTTCAGAGGAAAGAGATAACTTTAGCATGAAACTGATGAAGAACCAGAAAGAAATAGATGTTGAAGCTGAGCTGAAGAAACTAAGGGAGGCGATCGAGAATTTAAAGGCGGATTTGATGGATAAAGAAACAGAACTCCAGATCGTTTCAGATGAGAACGAGACATTGAAGTCAGATATCCACAAGAGCGAGACAGATGTACAAGACGCGTTCCTGAAGCTAGGGATTGCAATGGAAGAGGCTGACAAGAGTAGCAAGAAAGCGGTTAGAGTCACCGAGCAACTAGAGGCTACTCAAGCTTCAAACTCAGAAATGGAAACAGAACTCAGGAAGCTCAAAGTTCAATCAAACCAATGGAGAAAAGCTGCTGAAGCAGCTACTGCCATGCTCTCTGCTGGAAACAACGGGAAATTCGCTGAGAACTATAATCAAACGAACTCCCCGTACTCTGAGGATATCGATGATGAACTGACAAAGAAGAAAAATGGGAATGTGCTCAAGAAGATTGGAGTTTTGTGGAAGAAGCCTCAGAAATAG

Protein Analysis

564

Amino Acids

63.71

Weight (kDa)

5.14

Isoelectric Point (pI)

52.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1327
AccII CGCG 1 cut(s) 1367
AccIII TCCGGA 1 cut(s) 31
AciI CCGC 2 cut(s) 1268, 1421
AclI AACGTT 1 cut(s) 156
AclWI GGATC 2 cut(s) 34, 514
AcoI YGGCCR 1 cut(s) 68
AcsI RAATTY 3 cut(s) 652, 1258, 1568
AfaI GTAC 2 cut(s) 1359, 1604
AfeI AGCGCT 1 cut(s) 87
AfiI CCNNNNNNNGG 1 cut(s) 670
AflII CTTAAG 2 cut(s) 668, 970
AflIII ACRYGT 1 cut(s) 1365
AgeI ACCGGT 1 cut(s) 422
AgsI TTSAA 8 cut(s) 440, 608, 818, 848, 1223, 1327, 1461, 1502
AjiI CACGTC 2 cut(s) 646, 932
AjnI CCWGG 1 cut(s) 329
Alw21I GWGCWC 1 cut(s) 1656
Alw26I GTCTC 7 cut(s) 57, 177, 193, 241, 922, 1313, 1343
AlwI GGATC 2 cut(s) 34, 514
AlwNI CAGNNNCTG 3 cut(s) 287, 692, 1538
Ama87I CYCGRG 1 cut(s) 57
Aor13HI TCCGGA 1 cut(s) 31
Aor51HI AGCGCT 1 cut(s) 87
AoxI GGCC 2 cut(s) 68, 203
ApeKI GCWGC 7 cut(s) 62, 83, 241, 503, 998, 1523, 1532
ApoI RAATTY 3 cut(s) 652, 1258, 1568
AsiGI ACCGGT 1 cut(s) 422
AspLEI GCGC 1 cut(s) 88
AsuHPI GGTGA 2 cut(s) 497, 1423
AvaI CYCGRG 1 cut(s) 57
Bbv12I GWGCWC 1 cut(s) 1656
BbvI GCAGC 7 cut(s) 49, 95, 253, 490, 1010, 1510, 1544
BccI CCATC 7 cut(s) 541, 764, 796, 829, 943, 1126, 1270
BciT130I CCWGG 1 cut(s) 331
BciVI GTATCC 1 cut(s) 1056
BcoDI GTCTC 7 cut(s) 57, 177, 193, 241, 922, 1313, 1343
BfaI CTAG 6 cut(s) 89, 224, 233, 1004, 1379, 1442
BfoI RGCGCY 1 cut(s) 89
BfrI CTTAAG 2 cut(s) 668, 970
BfuI GTATCC 1 cut(s) 1056
BisI GCNGC 7 cut(s) 63, 84, 242, 504, 999, 1524, 1533
BlpI GCTNAGC 1 cut(s) 1227
BlsI GCNGC 7 cut(s) 64, 85, 243, 505, 1000, 1525, 1534
Bme1390I CCNGG 1 cut(s) 331
BmeT110I CYCGRG 1 cut(s) 57
BmgBI CACGTC 2 cut(s) 646, 932
BmiI GGNNCC 1 cut(s) 662
BmrFI CCNGG 1 cut(s) 331
BplI GAGNNNNNCTC 2 cut(s) 985, 1017
BpmI CTGGAG 2 cut(s) 1061, 1280
Bpu1102I GCTNAGC 1 cut(s) 1227
BpuEI CTTGAG 4 cut(s) 383, 515, 1437, 1640
Bsa29I ATCGAT 1 cut(s) 1617
BsaI GGTCTC 1 cut(s) 177
BsaJI CCNNGG 2 cut(s) 399, 699
BsaWI WCCGGW 2 cut(s) 31, 422
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 1 cut(s) 670
Bse118I RCCGGY 1 cut(s) 422
Bse1I ACTGG 1 cut(s) 1078
Bse3DI GCAATG 1 cut(s) 1395
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 1 cut(s) 331
BseCI ATCGAT 1 cut(s) 1617
BseDI CCNNGG 2 cut(s) 399, 699
BseGI GGATG 3 cut(s) 40, 840, 958
BseLI CCNNNNNNNGG 1 cut(s) 670
BseMI GCAATG 1 cut(s) 1395
BseNI ACTGG 1 cut(s) 1078
BseRI GAGGAG 5 cut(s) 45, 165, 266, 338, 380
BseXI GCAGC 7 cut(s) 49, 95, 253, 490, 1010, 1510, 1544
Bsh1236I CGCG 1 cut(s) 1367
Bsh1285I CGRYCG 1 cut(s) 1254
BshFI GGCC 2 cut(s) 70, 205
BshTI ACCGGT 1 cut(s) 422
BshVI ATCGAT 1 cut(s) 1617
BsiEI CGRYCG 1 cut(s) 1254
BsiHKAI GWGCWC 1 cut(s) 1656
BsiHKCI CYCGRG 1 cut(s) 57
BsiSI CCGG 2 cut(s) 32, 423
BslI CCNNNNNNNGG 1 cut(s) 670
BsmAI GTCTC 7 cut(s) 57, 177, 193, 241, 922, 1313, 1343
BsmBI CGTCTC 1 cut(s) 922
BsmI GAATGC 1 cut(s) 742
BsnI GGCC 2 cut(s) 70, 205
Bso31I GGTCTC 1 cut(s) 177
BsoBI CYCGRG 1 cut(s) 57
Bsp1286I GDGCHC 1 cut(s) 1656
Bsp13I TCCGGA 1 cut(s) 31
Bsp1407I TGTACA 1 cut(s) 1357
Bsp143I GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
Bsp1720I GCTNAGC 1 cut(s) 1227
BspACI CCGC 2 cut(s) 1268, 1421
BspANI GGCC 2 cut(s) 70, 205
BspDI ATCGAT 1 cut(s) 1617
BspEI TCCGGA 1 cut(s) 31
BspFNI CGCG 1 cut(s) 1367
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 1 cut(s) 662
BspPI GGATC 2 cut(s) 34, 514
BspTI CTTAAG 2 cut(s) 668, 970
BspTNI GGTCTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 1395
BsrFI RCCGGY 1 cut(s) 422
BsrGI TGTACA 1 cut(s) 1357
BsrI ACTGG 1 cut(s) 1078
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 2 cut(s) 399, 699
BssMI GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
BssT1I CCWWGG 1 cut(s) 399
Bst2UI CCWGG 1 cut(s) 331
Bst4CI ACNGT 3 cut(s) 677, 822, 1155
Bst6I CTCTTC 2 cut(s) 194, 1389
BstAFI CTTAAG 2 cut(s) 668, 970
BstAPI GCANNNNNTGC 1 cut(s) 1538
BstAUI TGTACA 1 cut(s) 1357
BstC8I GCNNGC 1 cut(s) 306
BstF5I GGATG 3 cut(s) 40, 840, 958
BstFNI CGCG 1 cut(s) 1367
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 1 cut(s) 88
BstKTI GATC 6 cut(s) 29, 81, 274, 522, 1254, 1302
BstMAI GTCTC 7 cut(s) 57, 177, 193, 241, 922, 1313, 1343
BstMBI GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
BstMCI CGRYCG 1 cut(s) 1254
BstNI CCWGG 1 cut(s) 331
BstSCI CCNGG 1 cut(s) 329
BstUI CGCG 1 cut(s) 1367
BstV1I GCAGC 7 cut(s) 49, 95, 253, 490, 1010, 1510, 1544
BstX2I RGATCY 2 cut(s) 26, 519
BstYI RGATCY 2 cut(s) 26, 519
Bsu15I ATCGAT 1 cut(s) 1617
BsuI GTATCC 1 cut(s) 1056
BsuRI GGCC 2 cut(s) 70, 205
BsuTUI ATCGAT 1 cut(s) 1617
BtrI CACGTC 2 cut(s) 646, 932
BtsCI GGATG 3 cut(s) 40, 840, 958
BtsIMutI CAGTG 3 cut(s) 71, 288, 711
Cac8I GCNNGC 1 cut(s) 306
CaiI CAGNNNCTG 3 cut(s) 287, 692, 1538
CciI TCATGA 1 cut(s) 514
CfoI GCGC 1 cut(s) 88
Cfr10I RCCGGY 1 cut(s) 422
ClaI ATCGAT 1 cut(s) 1617
CseI GACGC 1 cut(s) 1373
Csp6I GTAC 2 cut(s) 1358, 1603
CspAI ACCGGT 1 cut(s) 422
CviAII CATG 4 cut(s) 515, 572, 1186, 1543
CviQI GTAC 2 cut(s) 1358, 1603
DpnI GATC 6 cut(s) 28, 80, 273, 521, 1253, 1301
DpnII GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
DraI TTTAAA 1 cut(s) 1263
DrdI GACNNNNNNGTC 1 cut(s) 1327
DseDI GACNNNNNNGTC 1 cut(s) 1327
EaeI YGGCCR 1 cut(s) 68
Eam1104I CTCTTC 2 cut(s) 194, 1389
EarI CTCTTC 2 cut(s) 194, 1389
EciI GGCGGA 1 cut(s) 1283
Eco130I CCWWGG 1 cut(s) 399
Eco31I GGTCTC 1 cut(s) 177
Eco32I GATATC 3 cut(s) 684, 1336, 1615
Eco47III AGCGCT 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 57
EcoRII CCWGG 1 cut(s) 329
EcoRV GATATC 3 cut(s) 684, 1336, 1615
EcoT14I CCWWGG 1 cut(s) 399
ErhI CCWWGG 1 cut(s) 399
Esp3I CGTCTC 1 cut(s) 922
FaeI CATG 4 cut(s) 518, 575, 1189, 1546
FaiI YATR 8 cut(s) 516, 573, 594, 841, 918, 1187, 1544, 1584
FatI CATG 4 cut(s) 514, 571, 1185, 1542
Fnu4HI GCNGC 7 cut(s) 63, 84, 242, 504, 999, 1524, 1533
FokI GGATG 3 cut(s) 47, 847, 965
Fsp4HI GCNGC 7 cut(s) 63, 84, 242, 504, 999, 1524, 1533
FspBI CTAG 6 cut(s) 89, 224, 233, 1004, 1379, 1442
GlaI GCGC 1 cut(s) 87
GluI GCNGC 7 cut(s) 63, 84, 242, 504, 999, 1524, 1533
GsuI CTGGAG 2 cut(s) 1061, 1280
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 2 cut(s) 70, 205
HapII CCGG 2 cut(s) 32, 423
HgaI GACGC 1 cut(s) 1373
HhaI GCGC 1 cut(s) 88
Hin1II CATG 4 cut(s) 518, 575, 1189, 1546
Hin6I GCGC 1 cut(s) 86
HinP1I GCGC 1 cut(s) 86
HindIII AAGCTT 4 cut(s) 359, 533, 1008, 1455
HinfI GANTC 6 cut(s) 98, 148, 326, 376, 938, 1428
HpaII CCGG 2 cut(s) 32, 423
HphI GGTGA 2 cut(s) 497, 1423
Hpy99I CGWCG 1 cut(s) 650
HpyAV CCTTC 2 cut(s) 40, 1025
HpyCH4III ACNGT 3 cut(s) 677, 822, 1155
HpyCH4IV ACGT 3 cut(s) 156, 645, 931
HpyCH4V TGCA 2 cut(s) 4, 1388
HpySE526I ACGT 3 cut(s) 156, 645, 931
Hsp92II CATG 4 cut(s) 518, 575, 1189, 1546
HspAI GCGC 1 cut(s) 86
Kpn2I TCCGGA 1 cut(s) 31
Kzo9I GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
LmnI GCTCC 4 cut(s) 220, 253, 345, 811
Lsp1109I GCAGC 7 cut(s) 49, 95, 253, 490, 1010, 1510, 1544
MaeI CTAG 6 cut(s) 89, 224, 233, 1004, 1379, 1442
MaeII ACGT 3 cut(s) 156, 645, 931
MaeIII GTNAC 3 cut(s) 791, 1056, 1429
MalI GATC 6 cut(s) 28, 80, 273, 521, 1253, 1301
MboI GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
MfeI CAATTG 1 cut(s) 728
MflI RGATCY 2 cut(s) 26, 519
MhlI GDGCHC 1 cut(s) 1656
MluCI AATT 6 cut(s) 652, 728, 1085, 1148, 1258, 1568
MluI ACGCGT 1 cut(s) 1365
MlyI GAGTC 3 cut(s) 157, 335, 1437
MmeI TCCRAC 1 cut(s) 547
MroI TCCGGA 1 cut(s) 31
MseI TTAA 6 cut(s) 626, 669, 909, 971, 1088, 1262
MspCI CTTAAG 2 cut(s) 668, 970
MspI CCGG 2 cut(s) 32, 423
MspR9I CCNGG 1 cut(s) 331
MunI CAATTG 1 cut(s) 728
Mva1269I GAATGC 1 cut(s) 742
MvaI CCWGG 1 cut(s) 331
MvnI CGCG 1 cut(s) 1367
NdeII GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
NlaIII CATG 4 cut(s) 518, 575, 1189, 1546
NlaIV GGNNCC 1 cut(s) 662
NmeAIII GCCGAG 2 cut(s) 46, 231
NmuCI GTSAC 1 cut(s) 1429
PaeR7I CTCGAG 1 cut(s) 57
PagI TCATGA 1 cut(s) 514
PcsI WCGNNNNNNNCGW 1 cut(s) 1598
PctI GAATGC 1 cut(s) 742
PfeI GAWTC 3 cut(s) 98, 376, 938
PfoI TCCNGGA 1 cut(s) 329
PinAI ACCGGT 1 cut(s) 422
PkrI GCNGC 7 cut(s) 64, 85, 243, 505, 1000, 1525, 1534
Ple19I CGATCG 1 cut(s) 1254
PleI GAGTC 3 cut(s) 156, 334, 1436
PpsI GAGTC 3 cut(s) 156, 334, 1436
Psp1406I AACGTT 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 329
PspGI CCWGG 1 cut(s) 329
PspN4I GGNNCC 1 cut(s) 662
PspXI VCTCGAGB 1 cut(s) 57
PsrI GAACNNNNNNTAC 2 cut(s) 1586, 1618
PstNI CAGNNNCTG 3 cut(s) 287, 692, 1538
PsuI RGATCY 2 cut(s) 26, 519
PvuI CGATCG 1 cut(s) 1254
RsaI GTAC 2 cut(s) 1359, 1604
RsaNI GTAC 2 cut(s) 1358, 1603
SaqAI TTAA 6 cut(s) 626, 669, 909, 971, 1088, 1262
SatI GCNGC 7 cut(s) 63, 84, 242, 504, 999, 1524, 1533
Sau3AI GATC 6 cut(s) 26, 78, 271, 519, 1251, 1299
SchI GAGTC 3 cut(s) 157, 335, 1437
ScrFI CCNGG 1 cut(s) 331
SduI GDGCHC 1 cut(s) 1656
Sfr274I CTCGAG 1 cut(s) 57
SlaI CTCGAG 1 cut(s) 57
SmlI CTYRAG 7 cut(s) 57, 362, 530, 668, 970, 1452, 1655
SmoI CTYRAG 7 cut(s) 57, 362, 530, 668, 970, 1452, 1655
Sse9I AATT 6 cut(s) 652, 728, 1085, 1148, 1258, 1568
SsiI CCGC 2 cut(s) 1268, 1421
SspMI CTAG 6 cut(s) 89, 224, 233, 1004, 1379, 1442
StyD4I CCNGG 1 cut(s) 329
StyI CCWWGG 1 cut(s) 399
TaaI ACNGT 3 cut(s) 677, 822, 1155
TaiI ACGT 3 cut(s) 159, 648, 934
TaqI TCGA 5 cut(s) 58, 178, 648, 1254, 1617
TasI AATT 6 cut(s) 652, 728, 1085, 1148, 1258, 1568
TatI WGTACW 1 cut(s) 1357
TfiI GAWTC 3 cut(s) 98, 376, 938
Tru1I TTAA 6 cut(s) 626, 669, 909, 971, 1088, 1262
Tru9I TTAA 6 cut(s) 626, 669, 909, 971, 1088, 1262
TscAI CASTG 3 cut(s) 78, 288, 718
TseFI GTSAC 1 cut(s) 1429
TseI GCWGC 7 cut(s) 62, 83, 241, 503, 998, 1523, 1532
Tsp45I GTSAC 1 cut(s) 1429
TspDTI ATGAA 6 cut(s) 96, 933, 969, 1202, 1211, 1638
TspGWI ACGGA 2 cut(s) 233, 1075
TspRI CASTG 3 cut(s) 78, 288, 718
Vha464I CTTAAG 2 cut(s) 668, 970
XapI RAATTY 3 cut(s) 652, 1258, 1568
XbaI TCTAGA 1 cut(s) 1003
XhoI CTCGAG 1 cut(s) 57
XspI CTAG 6 cut(s) 89, 224, 233, 1004, 1379, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.