pycom11g10440

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
8860105 .. 8863406
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g10440.2

Sequence Viewer

Length: 1791 bp
ATGCAGACCCCTAAACCAAGAAGTGGCTCCTCTGAAGTGCCTCGAAGGGTCTCTCCTCCTCGAAAGGTCTCTCCTTCTCAAAAGGTCTGCTCTCGAGTTGTTCGCCAACTCAGGCCAACTGCATTGGAGACTGCTGATTCTGCATCTACTTCAAGTCAAGCTAAAAGAACACCTAAAGAAAGAAGCCCAAAAGTCACTGAGCGGCGGTCACCCAGAAGTCCATTGTTTGAGAAGAAGGGCCCAAGTAGAATATCTGAATTGGAATCTCAGATTTCTCAGCTCCAAGAGGATCTGAAGAAGGCAAAGAACCAGCTGCAATCATCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCCGAGGACTCCAAGAAGCAAGTACTGGCATTGTCTTCGAAGCTCGAAGAATCCCAGCTGCTGCTTCCTGAGCTTTCTATTTCTGAGGAAGCTCGTGTTATCAAGCTTCACAAGATTTCACAAGAAAGAGATCAAGCTTTCTCTTTGTGGCATTCCGAGCTTGAGGCTGTGCGGAAGCAGCACTCAGTTGACTCAGCTGCCTTGGCATCTGCTGTTGATGAGATTGAGAGGCTGAAGGTGCAGCTTGAAGCGGTAGCTGCATCTGAGGCTGATCAAACAAAGCATGCAGAGTTAACAAATGCCGAGCTTCAAAGCTTGAAAGAAAACTTGGCAGAAACACTTTCTCTTGTGGAGAACATGAAAACACAATTAAAGGACTGTAAGGCATCTGAAGCTCAAGCACAAGCAATGGTTAGTGAAACCCTACTGCAGCTGGAGTCCGCGAGAACAACAATGGAGGCACTCAGGTTAGATGGCACGAAATCGACAGAAGCTTACAAGTGCATTTCTTCAGAGTTAGATCAATCAAGGGTGCGTGTAAATTTACTAGAAGAACTCGTTAGCAAACTCAAGGCTGACCTGATTAATGCAAGCAGCAACATTTCACAAAATCAGGCTGGTGACAATGACCTTCAGCAAAAATTTGGAGAAAAGCAAGAGACTATGGAGTCAAACCAAACTGAGGCAGAACTCCATGACTTGAAGTCCGAAGTGGCACGGCTAAGATCTACTCTTGAAACTGCTGAGACCAAATACCACGAAGAAAAAATTCAGAGCACCGTGCAGCTAAGAAGTGCTCATGAACTAGTGGAGCAGATAAGATCTACATCTAGTCAGAGAGAGGGGGAACTGGATGCATTATTGACGAAAACGAAAGCTGAAGTTGAAGAGTTGAAAGCCCACCTGATGGATAAGGAAACTGAATTACAAGGCATTGCAGAGGAGAACGAGGGGCTCAATTCGAAGCTTGATAAAAGCCTGTCATGCCAGAGAGAGTATGAACTGGAAAAGGAATTGAAAGAACTAAAAGGGCATGTTACGGATTTAAGGGCTCATTTGATGGACAAGGAAACGGAACTGCAGAGTATTTCAGAAGAGAATGAAACACTCAGGTTGGAAATCAACAAAAGCCAAAGTAAAGTTAACAATGAGGTAGAGGTGGAAGTAGAGGCTGCAAGGTGTGCAGAACGAGAGGCTCTCGTGAAGCTTGGCATTGTGATGGAGGAGGCAGACAAGAGCAGCAAGAAGGTAGCAAGAGTGGCAGAACAGCTGGAGGCAGCACAGGCAGCCAATGCAGAAATGGAGGCTGAACTTAGAAGGTTGAAGGTGCAGTCTGACCAGTGGAGGAAGGCAGCTGAGGCAGCTGCAACCATGCTTTCACCAGGAAATAACGGCAAGCTGATGGAGAGAACTGGATCGATTGGACAGCAGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

597

Amino Acids

66.57

Weight (kDa)

5.45

Isoelectric Point (pI)

55.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1021
AccB7I CCANNNNNTGG 2 cut(s) 23, 1261
AccBSI CCGCTC 1 cut(s) 202
AccII CGCG 1 cut(s) 797
AciI CCGC 5 cut(s) 202, 205, 526, 605, 795
AclWI GGATC 2 cut(s) 297, 1777
AcsI RAATTY 3 cut(s) 895, 995, 1122
AcuI CTGAAG 7 cut(s) 54, 314, 608, 765, 849, 971, 1254
AfaI GTAC 1 cut(s) 378
AfiI CCNNNNNNNGG 3 cut(s) 23, 1036, 1261
AhdI GACNNNNNGTC 1 cut(s) 1057
AhlI ACTAGT 1 cut(s) 1159
AjnI CCWGG 1 cut(s) 1735
AjuI GAANNNNNNNTTGG 2 cut(s) 665, 697
Alw21I GWGCWC 2 cut(s) 1133, 1153
Alw26I GTCTC 5 cut(s) 55, 73, 122, 1007, 1094
AlwI GGATC 2 cut(s) 297, 1777
AlwNI CAGNNNCTG 1 cut(s) 415
Ama87I CYCGRG 1 cut(s) 93
AoxI GGCC 2 cut(s) 113, 238
ApaI GGGCCC 1 cut(s) 242
ApoI RAATTY 3 cut(s) 895, 995, 1122
AseI ATTAAT 1 cut(s) 939
Asp700I GAANNNNTTC 1 cut(s) 1122
AspS9I GGNCC 2 cut(s) 238, 239
AsuHPI GGTGA 3 cut(s) 201, 986, 1725
AsuII TTCGAA 2 cut(s) 392, 1316
AvaI CYCGRG 1 cut(s) 93
BaeGI GKGCMC 1 cut(s) 242
BanII GRGCYC 3 cut(s) 242, 1311, 1408
BauI CACGAG 2 cut(s) 447, 1553
BbsI GAAGAC 1 cut(s) 381
Bbv12I GWGCWC 2 cut(s) 1133, 1153
BbvCI CCTCAGC 1 cut(s) 1710
BccI CCATC 5 cut(s) 821, 1255, 1408, 1567, 1750
BceAI ACGGC 2 cut(s) 1088, 1762
BcgI CGANNNNNNTGC 2 cut(s) 372, 406
BciT130I CCWGG 1 cut(s) 1737
BclI TGATCA 1 cut(s) 625
BcoDI GTCTC 5 cut(s) 55, 73, 122, 1007, 1094
BcuI ACTAGT 1 cut(s) 1159
BfaI CTAG 3 cut(s) 902, 1160, 1185
BfmI CTRYAG 2 cut(s) 782, 1433
BglII AGATCT 2 cut(s) 1079, 1175
BlpI GCTNAGC 1 cut(s) 345
BmcAI AGTACT 1 cut(s) 378
Bme1390I CCNGG 1 cut(s) 1737
BmeRI GACNNNNNGTC 1 cut(s) 1057
BmeT110I CYCGRG 1 cut(s) 93
BmgT120I GGNCC 2 cut(s) 238, 239
BmiI GGNNCC 2 cut(s) 28, 240
BmrFI CCNGG 1 cut(s) 1737
BmsI GCATC 6 cut(s) 152, 343, 569, 623, 749, 1198
BpiI GAAGAC 1 cut(s) 381
BplI GAGNNNNNCTC 2 cut(s) 1536, 1568
BpmI CTGGAG 2 cut(s) 809, 1646
Bpu10I CCTNAGC 2 cut(s) 423, 1710
Bpu1102I GCTNAGC 1 cut(s) 345
Bpu14I TTCGAA 2 cut(s) 392, 1316
BpuEI CTTGAG 3 cut(s) 536, 735, 908
Bsa29I ATCGAT 1 cut(s) 1772
BsaBI GATNNNNATC 1 cut(s) 1180
BsaI GGTCTC 3 cut(s) 55, 73, 1094
BsaJI CCNNGG 2 cut(s) 357, 555
Bsc4I CCNNNNNNNGG 3 cut(s) 23, 1036, 1261
Bse1I ACTGG 5 cut(s) 384, 1209, 1362, 1693, 1771
Bse3DI GCAATG 2 cut(s) 768, 1287
Bse8I GATNNNNATC 1 cut(s) 1180
BseBI CCWGG 1 cut(s) 1737
BseCI ATCGAT 1 cut(s) 1772
BseDI CCNNGG 2 cut(s) 357, 555
BseGI GGATG 1 cut(s) 1213
BseJI GATNNNNATC 1 cut(s) 1180
BseLI CCNNNNNNNGG 3 cut(s) 23, 1036, 1261
BseMI GCAATG 2 cut(s) 768, 1287
BseNI ACTGG 5 cut(s) 384, 1209, 1362, 1693, 1771
BseRI GAGGAG 5 cut(s) 19, 45, 48, 1310, 1592
BseSI GKGCMC 1 cut(s) 242
BseYI CCCAGC 1 cut(s) 408
BsgI GTGCAG 4 cut(s) 614, 1157, 1557, 1703
Bsh1236I CGCG 1 cut(s) 797
BshFI GGCC 2 cut(s) 115, 240
BshVI ATCGAT 1 cut(s) 1772
BsiHKAI GWGCWC 2 cut(s) 1133, 1153
BsiHKCI CYCGRG 1 cut(s) 93
BslI CCNNNNNNNGG 3 cut(s) 23, 1036, 1261
BsmAI GTCTC 5 cut(s) 55, 73, 122, 1007, 1094
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 2 cut(s) 115, 240
Bso31I GGTCTC 3 cut(s) 55, 73, 1094
BsoBI CYCGRG 1 cut(s) 93
Bsp119I TTCGAA 2 cut(s) 392, 1316
Bsp120I GGGCCC 1 cut(s) 238
Bsp1286I GDGCHC 5 cut(s) 242, 1133, 1153, 1311, 1408
Bsp143I GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
Bsp1720I GCTNAGC 1 cut(s) 345
BspACI CCGC 5 cut(s) 202, 205, 526, 605, 795
BspANI GGCC 2 cut(s) 115, 240
BspDI ATCGAT 1 cut(s) 1772
BspFNI CGCG 1 cut(s) 797
BspHI TCATGA 1 cut(s) 1153
BspLI GGNNCC 2 cut(s) 28, 240
BspMAI CTGCAG 2 cut(s) 786, 1437
BspPI GGATC 2 cut(s) 297, 1777
BspT104I TTCGAA 2 cut(s) 392, 1316
BspTNI GGTCTC 3 cut(s) 55, 73, 1094
BsrBI CCGCTC 1 cut(s) 202
BsrDI GCAATG 2 cut(s) 768, 1287
BsrI ACTGG 5 cut(s) 384, 1209, 1362, 1693, 1771
BssECI CCNNGG 2 cut(s) 357, 555
BssMI GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
BssSI CACGAG 2 cut(s) 447, 1553
BssT1I CCWWGG 1 cut(s) 555
Bst2BI CACGAG 2 cut(s) 447, 1553
Bst2UI CCWGG 1 cut(s) 1737
Bst4CI ACNGT 2 cut(s) 734, 1135
Bst6I CTCTTC 2 cut(s) 1236, 1443
BstAPI GCANNNNNTGC 2 cut(s) 1535, 1646
BstBI TTCGAA 2 cut(s) 392, 1316
BstC8I GCNNGC 4 cut(s) 342, 639, 946, 1751
BstEII GGTNACC 1 cut(s) 207
BstF5I GGATG 1 cut(s) 1213
BstFNI CGCG 1 cut(s) 797
BstKTI GATC 7 cut(s) 292, 487, 628, 877, 1082, 1178, 1772
BstMAI GTCTC 5 cut(s) 55, 73, 122, 1007, 1094
BstMBI GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
BstNI CCWGG 1 cut(s) 1737
BstNSI RCATGY 2 cut(s) 641, 1391
BstPI GGTNACC 1 cut(s) 207
BstSCI CCNGG 1 cut(s) 1735
BstSFI CTRYAG 2 cut(s) 782, 1433
BstSLI GKGCMC 1 cut(s) 242
BstUI CGCG 1 cut(s) 797
BstV2I GAAGAC 1 cut(s) 381
BstX2I RGATCY 3 cut(s) 289, 1079, 1175
BstYI RGATCY 3 cut(s) 289, 1079, 1175
Bsu15I ATCGAT 1 cut(s) 1772
BsuRI GGCC 2 cut(s) 115, 240
BsuTUI ATCGAT 1 cut(s) 1772
BtsCI GGATG 1 cut(s) 1213
BtsIMutI CAGTG 2 cut(s) 195, 1700
Cac8I GCNNGC 4 cut(s) 342, 639, 946, 1751
CaiI CAGNNNCTG 1 cut(s) 415
CciI TCATGA 1 cut(s) 1153
Cfr13I GGNCC 2 cut(s) 238, 239
ClaI ATCGAT 1 cut(s) 1772
Csp6I GTAC 1 cut(s) 377
CviAII CATG 8 cut(s) 330, 638, 712, 1049, 1154, 1338, 1388, 1726
CviQI GTAC 1 cut(s) 377
DpnI GATC 7 cut(s) 291, 486, 627, 876, 1081, 1177, 1771
DpnII GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
DrdI GACNNNNNNGTC 1 cut(s) 1021
DriI GACNNNNNGTC 1 cut(s) 1057
DseDI GACNNNNNNGTC 1 cut(s) 1021
Eam1104I CTCTTC 2 cut(s) 1236, 1443
Eam1105I GACNNNNNGTC 1 cut(s) 1057
EarI CTCTTC 2 cut(s) 1236, 1443
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 3 cut(s) 242, 1311, 1408
Eco31I GGTCTC 3 cut(s) 55, 73, 1094
Eco57I CTGAAG 7 cut(s) 54, 314, 608, 765, 849, 971, 1254
Eco88I CYCGRG 1 cut(s) 93
Eco91I GGTNACC 1 cut(s) 207
EcoO109I RGGNCCY 1 cut(s) 238
EcoO65I GGTNACC 1 cut(s) 207
EcoRII CCWGG 1 cut(s) 1735
EcoT14I CCWWGG 1 cut(s) 555
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 3 cut(s) 242, 1311, 1408
ErhI CCWWGG 1 cut(s) 555
FaeI CATG 8 cut(s) 333, 641, 715, 1052, 1157, 1341, 1391, 1729
FatI CATG 8 cut(s) 329, 637, 711, 1048, 1153, 1337, 1387, 1725
FbaI TGATCA 1 cut(s) 625
FokI GGATG 1 cut(s) 1220
FriOI GRGCYC 3 cut(s) 242, 1311, 1408
FspBI CTAG 3 cut(s) 902, 1160, 1185
GsaI CCCAGC 1 cut(s) 412
GsuI CTGGAG 2 cut(s) 809, 1646
HaeIII GGCC 2 cut(s) 115, 240
Hin1II CATG 8 cut(s) 333, 641, 715, 1052, 1157, 1341, 1391, 1729
HincII GTYRAC 3 cut(s) 544, 648, 1498
HindII GTYRAC 3 cut(s) 544, 648, 1498
HindIII AAGCTT 6 cut(s) 458, 489, 667, 846, 1319, 1559
HinfI GANTC 8 cut(s) 137, 263, 326, 362, 404, 545, 791, 1022
HpaI GTTAAC 2 cut(s) 648, 1498
HphI GGTGA 3 cut(s) 201, 986, 1725
Hpy166II GTNNAC 3 cut(s) 544, 648, 1498
Hpy188III TCNNGA 5 cut(s) 93, 422, 1088, 1154, 1555
Hpy8I GTNNAC 3 cut(s) 544, 648, 1498
HpyCH4III ACNGT 2 cut(s) 734, 1135
Hsp92II CATG 8 cut(s) 333, 641, 715, 1052, 1157, 1341, 1391, 1729
Ksp22I TGATCA 1 cut(s) 625
KspAI GTTAAC 2 cut(s) 648, 1498
Kzo9I GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
LmnI GCTCC 3 cut(s) 32, 285, 1165
LweI GCATC 6 cut(s) 152, 343, 569, 623, 749, 1198
MaeI CTAG 3 cut(s) 902, 1160, 1185
MaeIII GTNAC 4 cut(s) 193, 207, 974, 1390
MalI GATC 7 cut(s) 291, 486, 627, 876, 1081, 1177, 1771
MbiI CCGCTC 1 cut(s) 202
MboI GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
MboII GAAGA 9 cut(s) 244, 307, 381, 413, 855, 917, 1127, 1253, 1460
MflI RGATCY 3 cut(s) 289, 1079, 1175
MhlI GDGCHC 5 cut(s) 242, 1133, 1153, 1311, 1408
MluCI AATT 8 cut(s) 257, 722, 895, 995, 1122, 1277, 1312, 1367
MlyI GAGTC 4 cut(s) 356, 539, 800, 1031
MmeI TCCRAC 1 cut(s) 1449
Mph1103I ATGCAT 1 cut(s) 1213
MroXI GAANNNNTTC 1 cut(s) 1122
MseI TTAA 5 cut(s) 647, 725, 939, 1400, 1497
MslI CAYNNNNRTG 1 cut(s) 1571
MspA1I CMGCKG 7 cut(s) 313, 412, 551, 787, 1624, 1709, 1718
MspR9I CCNGG 1 cut(s) 1737
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 1 cut(s) 1737
MvnI CGCG 1 cut(s) 797
NdeII GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
NlaIII CATG 8 cut(s) 333, 641, 715, 1052, 1157, 1341, 1391, 1729
NlaIV GGNNCC 2 cut(s) 28, 240
NmeAIII GCCGAG 2 cut(s) 382, 682
NmuCI GTSAC 3 cut(s) 193, 207, 974
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 2 cut(s) 641, 1391
NspV TTCGAA 2 cut(s) 392, 1316
PaeI GCATGC 1 cut(s) 641
PaeR7I CTCGAG 1 cut(s) 93
PagI TCATGA 1 cut(s) 1153
PctI GAATGC 1 cut(s) 505
PdmI GAANNNNTTC 1 cut(s) 1122
PfeI GAWTC 4 cut(s) 137, 263, 326, 404
PflMI CCANNNNNTGG 2 cut(s) 23, 1261
PleI GAGTC 4 cut(s) 356, 539, 799, 1030
PpsI GAGTC 4 cut(s) 356, 539, 799, 1030
PshBI ATTAAT 1 cut(s) 939
Psp6I CCWGG 1 cut(s) 1735
PspEI GGTNACC 1 cut(s) 207
PspFI CCCAGC 1 cut(s) 408
PspGI CCWGG 1 cut(s) 1735
PspN4I GGNNCC 2 cut(s) 28, 240
PspOMI GGGCCC 1 cut(s) 238
PspPI GGNCC 2 cut(s) 238, 239
PstI CTGCAG 2 cut(s) 786, 1437
PstNI CAGNNNCTG 1 cut(s) 415
PsuI RGATCY 3 cut(s) 289, 1079, 1175
PvuII CAGCTG 7 cut(s) 313, 412, 551, 787, 1624, 1709, 1718
RsaI GTAC 1 cut(s) 378
RsaNI GTAC 1 cut(s) 377
RseI CAYNNNNRTG 1 cut(s) 1571
SaqAI TTAA 5 cut(s) 647, 725, 939, 1400, 1497
Sau3AI GATC 7 cut(s) 289, 484, 625, 874, 1079, 1175, 1769
Sau96I GGNCC 2 cut(s) 238, 239
ScaI AGTACT 1 cut(s) 378
SchI GAGTC 4 cut(s) 356, 539, 800, 1031
ScrFI CCNGG 1 cut(s) 1737
SduI GDGCHC 5 cut(s) 242, 1133, 1153, 1311, 1408
SfaNI GCATC 6 cut(s) 152, 343, 569, 623, 749, 1198
SfcI CTRYAG 2 cut(s) 782, 1433
Sfr274I CTCGAG 1 cut(s) 93
SfuI TTCGAA 2 cut(s) 392, 1316
SlaI CTCGAG 1 cut(s) 93
SmiMI CAYNNNNRTG 1 cut(s) 1571
SmlI CTYRAG 4 cut(s) 93, 515, 750, 923
SmoI CTYRAG 4 cut(s) 93, 515, 750, 923
SpeI ACTAGT 1 cut(s) 1159
SphI GCATGC 1 cut(s) 641
Sse9I AATT 8 cut(s) 257, 722, 895, 995, 1122, 1277, 1312, 1367
SsiI CCGC 5 cut(s) 202, 205, 526, 605, 795
SspMI CTAG 3 cut(s) 902, 1160, 1185
StyD4I CCNGG 1 cut(s) 1735
StyI CCWWGG 1 cut(s) 555
TaaI ACNGT 2 cut(s) 734, 1135
TaqI TCGA 8 cut(s) 43, 61, 94, 392, 399, 839, 1316, 1772
TasI AATT 8 cut(s) 257, 722, 895, 995, 1122, 1277, 1312, 1367
TatI WGTACW 1 cut(s) 376
TauI GCSGC 1 cut(s) 205
TfiI GAWTC 4 cut(s) 137, 263, 326, 404
Tru1I TTAA 5 cut(s) 647, 725, 939, 1400, 1497
Tru9I TTAA 5 cut(s) 647, 725, 939, 1400, 1497
TscAI CASTG 2 cut(s) 202, 1700
TseFI GTSAC 3 cut(s) 193, 207, 974
Tsp45I GTSAC 3 cut(s) 193, 207, 974
TspDTI ATGAA 4 cut(s) 728, 1170, 1368, 1470
TspGWI ACGGA 2 cut(s) 1409, 1442
TspRI CASTG 2 cut(s) 202, 1700
Van91I CCANNNNNTGG 2 cut(s) 23, 1261
VspI ATTAAT 1 cut(s) 939
XapI RAATTY 3 cut(s) 895, 995, 1122
XceI RCATGY 2 cut(s) 641, 1391
XcmI CCANNNNNNNNNTGG 1 cut(s) 1651
XhoI CTCGAG 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 1122
XspI CTAG 3 cut(s) 902, 1160, 1185
ZrmI AGTACT 1 cut(s) 378
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.