Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002567

Physical Location & Seq

Genomic Coordinates Reverse (-)

40846754 .. 40849678

Gene Structure 2925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0336600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGTCCAAGGAGGAGTTGGAGGACATAATCCTGCAGAAAATCTTTCTTGTATCACTCACCGAGCCCTCCGAACCCGATTCTCGAATCGTCTACTTGGAGATGACGGCTGCAGAGATTCTCAGCGTAGGCAAGGAGATGAGGCTCAGTATAGACCTCATGGAGTCGATCCTAATCGATCGGCTTATGGGTAATTTCGGCTCTGTCGAACCACCTTTTCAGTACCTAGTTGGCTGCTACAAACGTGCCCATGATGAGTGTAAGAAGATTACTTCTGTGAAACATAAGGATTTGAGGTTTTATATGGAATCTATTATTAGGCAAGCCAAGAAGCTGTCGGTTTCGTATGGTAGGATTCACTTGGGGAACCCGGAAGCGTTTCCTAGTCCAGGTGGGAATTCAAAAAACTCAATAAGTGCGTCCCCTTTGTTGCCGTTGATTTTCTCAGAGGTTGCAAATTCAGTGGATGGATTTGGAGGAAGCAGTAGTAGCCCACCTGGGTTTTTGGATGAGTTCTTTCGTGACTCGGATTTTGATATGTTGGACCCCATTTTAAAGGGTTTGTATGAAGAACTTACGGAGACTGTGCAAAATGTTTCGGCACTTGGAAACTTTCAGCAGCCATTGAGGGCTCTGTTGTTTTTGGTTAGTTTCCCAGCTGGTGCCAAGTCTCTTGTGAATCACCCAAGGTGGATTCCCAAAGGAGTCTTGAATGGCCGTGGTATTGAAAAGACAAGTATTTTAGGTCCTTTCTTTCATGTCAGTGCCCTGTCTGACCATCCTTTTTCTGTTAGTGAGTTCTTTTCAGAAGGTTCTAACACAGCTGATAAGTCTTCGTACGTGACGATTAAGACAGTGATGAACAATTTATATGATGGCCTCGCACAAGTTCTCCTCACGCTACTGAAAAATCCAGACACCCGCGAGAAAGTGCTCGAGTATCTTGCTGTGGTTATCAACAAGAACTCATCAAGAGCTCATATGCAAGTGGATCCTCTTTCCTGCGCAAGTTCGGGGATGTTTGTCAATCTCAGTGCGGTCATGCTTCGGCTTTGCGGGCCGCTTTTAGATGCAAACTTAACCAAAAGAGACAAAATTTATCCGAAATATGTGTTCTCAGGTAACCGTCTGGAGTTGAGAGGTTTGACAGCTCTACATGCAACATCTGAGGAAGTTACTGAATGGATTAGTAAAGATAACATGAGTGCTCAATATTTTATTAATTGTGAGTGCTTCTTCATGACTGCGAGGGTGCTCAATCTGGGTTTATTGAAAGCATTTTCTGACCATAAACATTTAGAACAGAACATTCGCAGGTCTAAAGAAGCACTTAATGCCATGAAAGACCGGGGTTCTCCACAGTTGAACACTAACATAGCTCAGCTCGAGAAAGAAATAAAGTTGTTAGAACAGGAAAGGGATTGCTACGAAGCTCAGATAGTAAGGGATGAACCACTTGTACAGCAGGCGATTTCTTTCTACCGGTTGATGGTGGTGTGGCTAGGCGGCTTGGTTGGTGGATTTAAAATGCCTCTGCCATCAATTTGCCCCATAGAATTTGCATCTATGCCAGAGCATTTTGTGGAAGATGCCATGGAGTTGCTTTTATTTGCTTCCCGGATTCCAAAAGCATTTAGTGGGATCTTGTTGGATGATTTTATGAACTTCATAATAATGTTCATGGCAAGTCCAGAATATATCAGGAACCCTTATCTAAGATCAAAGATGGTTGAAGTCCTCAACTGCTTGATGCCGCGTGGAAGTCGACCATCTGATGCTCCTCCTACCCTGTTCAAAGGGCACAAACTGTCTCTTGAGTATCTTGTAAGGAATCTCTTGACACTATATGTGGATGTTGAGTTGACTAGCTCTCACAGACAGTTCTATGACAAGTTTAACATCCGGCACAAAATTGCTAAGCTTCTGGAGTATCTGTGGCAAGTACCTAGTCATCGAAATGCTTGGAAAAAGGTTGCTAAGGAAGAGGAGAAGGGCGTATATTTGAATTACTTAAACTTCTTGATCAATGACAGTATATATCTTCTGGATAACAGTTTTAAAACGATTCTTGAACACAAACAACTGGAAGCCGAGATGTCAAACAATGCAGAATGGAAGCGTCGACCTGCTCAAGAGAGGAAGGAGAAAGCTCGCCTCTTCCACTCTCAGGAAAAGATTATCCAAACTCATTTGACGTTCGCAAATGAAGATCTGAATACGCTGGCATTTACTTCAGAACAGATTACAGCTCCTTTCCTACTCCCAGAGATGGTTGAAAGGGTGGCAAGCATGCTGAATTATTTTTTGTTGCAATTGGTAGGTCCTAAAAGAAAATCTCTTAAATTGAAAGACCCCGAGAAATGTAAGTTTCACCCAGAGCAATTGATCAAGCAGATTCTCTACATATATGTTCATCTGGCAAGAGGCGATACAGACAATACATTTGCAGCTGCCATCTCAAAAGATGGTAGGTCTTACAATGACCAATTGTTTTGTGCTGCCGCGGATGTCTTAAGGAAAATTGGTGAAGATGGGAGGGTCATACAAGAGTTTGTTGAGCTTGGTTCCAAAGCTGAGGTTGCTGCTTCGGAGGCCTTGGACGCTGAAGCTGCACTTGGAGATATACCAGATGAGTTCCTAGATCCAATTCAGTACACTTTAATGAAGGATCCAGTTATCCTACCTTCTTCAAGAATCACAATAGACCGGCCAGTCATTCAGAGGCATCTTCTTAGTGATAATACTGATCCATTCAATCGTTCCCATCTTACTGCGGACATGTTGATACCAAACAATGAACTGAAAGCAAAAATACAAGAGTTCATTAGGTCCCAAGAGTCGAAGAGTGGGAAAAGCCTAAGCATGCAGAGCAGCAAGACTACAATACCAATTCACCACAACATATGGTATGCTAGTAAGCTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04530 map04530

Pfam Domains

Protein Families

No domains found.

Protein Analysis

974

Amino Acids

110.49

Weight (kDa)

6.43

Isoelectric Point (pI)

45.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ufd2P_core	PF10408	247 - 858	4.8e-182	Ubiquitin elongating factor core
U-box	PF04564	874 - 945	4.4e-31	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002567)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60210 AT5G60210 AT5G60210 AT5G60210 AT5G60210 AT5G60210
fragaria_vesca	FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632 FvH4_3g33632
malus_domestica	MD03G1110200.v1.1 MD11G1123900.v1.1
prunus_persica	Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1 Prupe.6G092800_v2.0.a1
pyrus_communis	pycom11g10440
rosa_chinensis	RchiOBHm_Chr5g0061061
rosa_laevigata	RLG00000035425
rosa_multiflora	Rmu_sc0015006.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019580
rosa_rugosa	Rorug05G0336600 Rorug05G0336700 Rorug05G0336800 Rorug05G0336900
rosa_samantha	Rh5AG398700 Rh5BG411600 Rh5CG436600 Rh5DG426000
rosa_wichuraiana	Rw5G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2708
Acc16I	TGCGCA	1 cut(s)	1003
Acc36I	ACCTGC	2 cut(s)	1302, 2131
AccB1I	GGYRCC	1 cut(s)	659
AccI	GTMKAC	3 cut(s)	90, 1762, 2119
AccII	CGCG	3 cut(s)	921, 1753, 2501
AciI	CCGC	9 cut(s)	919, 1034, 1053, 1058, 1503, 1751, 2499, 2501, 2771
AclWI	GGATC	8 cut(s)	160, 983, 996, 1646, 2633, 2660, 2673, 2738
AcoI	YGGCCR	2 cut(s)	712, 2705
AcsI	RAATTY	4 cut(s)	394, 454, 1092, 1553
AcuI	CTGAAG	2 cut(s)	2214, 2622
AfaI	GTAC	5 cut(s)	221, 836, 1458, 1941, 2651
AfiI	CCNNNNNNNGG	4 cut(s)	386, 1486, 2164, 2266
AflII	CTTAAG	1 cut(s)	2509
AflIII	ACRYGT	1 cut(s)	2775
AgeI	ACCGGT	1 cut(s)	1479
AjnI	CCWGG	2 cut(s)	385, 493
AjuI	GAANNNNNNNTTGG	2 cut(s)	2595, 2627
Alw21I	GWGCWC	4 cut(s)	933, 976, 1207, 1254
Alw26I	GTCTC	4 cut(s)	572, 672, 1080, 1812
AlwI	GGATC	8 cut(s)	160, 983, 996, 1646, 2633, 2660, 2673, 2738
Ama87I	CYCGRG	3 cut(s)	932, 1382, 2351
AoxI	GGCC	5 cut(s)	712, 874, 1055, 2589, 2705
ApeKI	GCWGC	9 cut(s)	107, 231, 616, 2444, 2447, 2495, 2579, 2606, 2868
ApoI	RAATTY	4 cut(s)	394, 454, 1092, 1553
ArsI	GACNNNNNNTTYG	4 cut(s)	512, 544, 2423, 2455
AseI	ATTAAT	1 cut(s)	1218
AsiGI	ACCGGT	1 cut(s)	1479
Asp700I	GAANNNNTTC	1 cut(s)	375
AspLEI	GCGC	1 cut(s)	1004
AspS9I	GGNCC	5 cut(s)	541, 743, 1055, 2318, 2826
AsuC2I	CCSGG	3 cut(s)	368, 1346, 1615
AsuHPI	GGTGA	5 cut(s)	49, 671, 2360, 2534, 2882
AvaI	CYCGRG	3 cut(s)	932, 1382, 2351
AvaII	GGWCC	4 cut(s)	541, 743, 2318, 2826
BaeGI	GKGCMC	3 cut(s)	247, 766, 1800
BamHI	GGATCC	2 cut(s)	988, 2665
BanI	GGYRCC	1 cut(s)	659
BanII	GRGCYC	3 cut(s)	66, 631, 976
BbsI	GAAGAC	1 cut(s)	822
Bbv12I	GWGCWC	4 cut(s)	933, 976, 1207, 1254
BbvCI	CCTCAGC	1 cut(s)	2571
BbvI	GCAGC	9 cut(s)	94, 218, 628, 2434, 2456, 2482, 2566, 2593, 2880
BceAI	ACGGC	3 cut(s)	120, 415, 699
BcgI	CGANNNNNNTGC	2 cut(s)	923, 957
BciT130I	CCWGG	2 cut(s)	387, 495
BclI	TGATCA	2 cut(s)	2019, 2382
BcnI	CCSGG	3 cut(s)	368, 1346, 1615
BcoDI	GTCTC	4 cut(s)	572, 672, 1080, 1812
BfaI	CTAG	8 cut(s)	224, 381, 1499, 1863, 1944, 2636, 2910, 2918
BfmI	CTRYAG	2 cut(s)	32, 108
BfrI	CTTAAG	1 cut(s)	2509
BfuAI	ACCTGC	2 cut(s)	1302, 2131
BglII	AGATCT	1 cut(s)	2206
BlpI	GCTNAGC	2 cut(s)	1377, 1914
Bme1390I	CCNGG	5 cut(s)	368, 387, 495, 1346, 1615
Bme18I	GGWCC	4 cut(s)	541, 743, 2318, 2826
BmeT110I	CYCGRG	3 cut(s)	932, 1382, 2351
BmgT120I	GGNCC	5 cut(s)	541, 743, 1055, 2318, 2826
BmiI	GGNNCC	8 cut(s)	365, 543, 661, 990, 1703, 2563, 2667, 2828
BmrFI	CCNGG	5 cut(s)	368, 387, 495, 1346, 1615
BmsI	GCATC	6 cut(s)	1057, 1568, 1576, 1737, 1762, 2731
BpiI	GAAGAC	1 cut(s)	822
BpmI	CTGGAG	2 cut(s)	1148, 1943
Bpu10I	CCTNAGC	3 cut(s)	1974, 2571, 2855
Bpu1102I	GCTNAGC	2 cut(s)	1377, 1914
BpuEI	CTTGAG	2 cut(s)	1832, 2112
BpuMI	CCSGG	3 cut(s)	368, 1346, 1615
Bsa29I	ATCGAT	1 cut(s)	174
BsaAI	YACGTR	1 cut(s)	838
BsaBI	GATNNNNATC	1 cut(s)	170
BsaJI	CCNNGG	8 cut(s)	6, 494, 683, 715, 1345, 1590, 2499, 2592
BsaWI	WCCGGW	1 cut(s)	1479
BsaXI	ACNNNNNCTCC	4 cut(s)	873, 903, 1916, 1946
Bsc4I	CCNNNNNNNGG	4 cut(s)	386, 1486, 2164, 2266
Bse118I	RCCGGY	2 cut(s)	1479, 2703
Bse1I	ACTGG	3 cut(s)	2085, 2669, 2708
Bse8I	GATNNNNATC	1 cut(s)	170
BseBI	CCWGG	2 cut(s)	387, 495
BseCI	ATCGAT	1 cut(s)	174
BseDI	CCNNGG	8 cut(s)	6, 494, 683, 715, 1345, 1590, 2499, 2592
BseGI	GGATG	9 cut(s)	469, 511, 775, 1020, 1450, 1654, 1855, 1896, 2509
BseJI	GATNNNNATC	1 cut(s)	170
BseLI	CCNNNNNNNGG	4 cut(s)	386, 1486, 2164, 2266
BseNI	ACTGG	3 cut(s)	2085, 2669, 2708
BseRI	GAGGAG	4 cut(s)	26, 881, 1767, 1997
BseSI	GKGCMC	3 cut(s)	247, 766, 1800
BseXI	GCAGC	9 cut(s)	94, 218, 628, 2434, 2456, 2482, 2566, 2593, 2880
BseYI	CCCAGC	1 cut(s)	652
BsgI	GTGCAG	1 cut(s)	2592
Bsh1236I	CGCG	3 cut(s)	921, 1753, 2501
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	5 cut(s)	714, 876, 1057, 2591, 2707
BshNI	GGYRCC	1 cut(s)	659
BshTI	ACCGGT	1 cut(s)	1479
BshVI	ATCGAT	1 cut(s)	174
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	4 cut(s)	933, 976, 1207, 1254
BsiHKCI	CYCGRG	3 cut(s)	932, 1382, 2351
BsiSI	CCGG	6 cut(s)	368, 1345, 1480, 1615, 1900, 2704
BsiWI	CGTACG	1 cut(s)	834
BslFI	GGGAC	2 cut(s)	403, 2812
BslI	CCNNNNNNNGG	4 cut(s)	386, 1486, 2164, 2266
BsmAI	GTCTC	4 cut(s)	572, 672, 1080, 1812
BsmFI	GGGAC	2 cut(s)	403, 2812
BsnI	GGCC	5 cut(s)	714, 876, 1057, 2591, 2707
BsoBI	CYCGRG	3 cut(s)	932, 1382, 2351
Bsp1286I	GDGCHC	9 cut(s)	66, 247, 631, 766, 933, 976, 1207, 1254, 1800
Bsp1407I	TGTACA	1 cut(s)	1456
Bsp1720I	GCTNAGC	2 cut(s)	1377, 1914
Bsp19I	CCATGG	1 cut(s)	1590
BspACI	CCGC	9 cut(s)	919, 1034, 1053, 1058, 1503, 1751, 2499, 2501, 2771
BspANI	GGCC	5 cut(s)	714, 876, 1057, 2591, 2707
BspDI	ATCGAT	1 cut(s)	174
BspFNI	CGCG	3 cut(s)	921, 1753, 2501
BspHI	TCATGA	1 cut(s)	1236
BspLI	GGNNCC	8 cut(s)	365, 543, 661, 990, 1703, 2563, 2667, 2828
BspMAI	CTGCAG	2 cut(s)	36, 112
BspMI	ACCTGC	2 cut(s)	1302, 2131
BspPI	GGATC	8 cut(s)	160, 983, 996, 1646, 2633, 2660, 2673, 2738
BspT107I	GGYRCC	1 cut(s)	659
BspTI	CTTAAG	1 cut(s)	2509
BsrFI	RCCGGY	2 cut(s)	1479, 2703
BsrGI	TGTACA	1 cut(s)	1456
BsrI	ACTGG	3 cut(s)	2085, 2669, 2708
BssAI	RCCGGY	2 cut(s)	1479, 2703
BssECI	CCNNGG	8 cut(s)	6, 494, 683, 715, 1345, 1590, 2499, 2592
BssT1I	CCWWGG	4 cut(s)	6, 683, 1590, 2592
Bst2UI	CCWGG	2 cut(s)	387, 495
Bst4CI	ACNGT	8 cut(s)	583, 853, 1124, 1359, 1806, 1878, 2030, 2051
Bst6I	CTCTTC	3 cut(s)	1974, 2159, 2834
BstAFI	CTTAAG	1 cut(s)	2509
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstAUI	TGTACA	1 cut(s)	1456
BstBAI	YACGTR	1 cut(s)	838
BstC8I	GCNNGC	8 cut(s)	321, 1055, 1464, 2149, 2220, 2284, 2288, 2861
BstDSI	CCRYGG	3 cut(s)	715, 1590, 2499
BstEII	GGTNACC	1 cut(s)	1118
BstENI	CCTNNNNNAGG	1 cut(s)	384
BstF5I	GGATG	9 cut(s)	469, 511, 775, 1020, 1450, 1654, 1855, 1896, 2509
BstFNI	CGCG	3 cut(s)	921, 1753, 2501
BstHHI	GCGC	1 cut(s)	1004
BstMAI	GTCTC	4 cut(s)	572, 672, 1080, 1812
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	9 cut(s)	486, 1054, 1154, 1331, 2576, 2588, 2597, 2606, 2865
BstNI	CCWGG	2 cut(s)	387, 495
BstNSI	RCATGY	4 cut(s)	1157, 2290, 2779, 2863
BstPI	GGTNACC	1 cut(s)	1118
BstSCI	CCNGG	5 cut(s)	366, 385, 493, 1344, 1613
BstSFI	CTRYAG	2 cut(s)	32, 108
BstSLI	GKGCMC	3 cut(s)	247, 766, 1800
BstUI	CGCG	3 cut(s)	921, 1753, 2501
BstV1I	GCAGC	9 cut(s)	94, 218, 628, 2434, 2456, 2482, 2566, 2593, 2880
BstV2I	GAAGAC	1 cut(s)	822
BstX2I	RGATCY	5 cut(s)	988, 1638, 2206, 2638, 2665
BstYI	RGATCY	5 cut(s)	988, 1638, 2206, 2638, 2665
Bsu15I	ATCGAT	1 cut(s)	174
BsuRI	GGCC	5 cut(s)	714, 876, 1057, 2591, 2707
BsuTUI	ATCGAT	1 cut(s)	174
BtgI	CCRYGG	3 cut(s)	715, 1590, 2499
BtsCI	GGATG	9 cut(s)	469, 511, 775, 1020, 1450, 1654, 1855, 1896, 2509
BtsIMutI	CAGTG	4 cut(s)	465, 766, 858, 1036
BveI	ACCTGC	2 cut(s)	1302, 2131
Cac8I	GCNNGC	8 cut(s)	321, 1055, 1464, 2149, 2220, 2284, 2288, 2861
CciI	TCATGA	1 cut(s)	1236
CfoI	GCGC	1 cut(s)	1004
Cfr10I	RCCGGY	2 cut(s)	1479, 2703
Cfr13I	GGNCC	5 cut(s)	541, 743, 1055, 2318, 2826
Cfr42I	CCGCGG	1 cut(s)	2502
ClaI	ATCGAT	1 cut(s)	174
CseI	GACGC	3 cut(s)	405, 2105, 2606
Csp6I	GTAC	5 cut(s)	220, 835, 1457, 1940, 2650
CspAI	ACCGGT	1 cut(s)	1479
CspCI	CAANNNNNGTGG	2 cut(s)	441, 476
CviQI	GTAC	5 cut(s)	220, 835, 1457, 1940, 2650
DraI	TTTAAA	3 cut(s)	552, 1522, 2056
DrdI	GACNNNNNNGTC	1 cut(s)	2708
DseDI	GACNNNNNNGTC	1 cut(s)	2708
EaeI	YGGCCR	2 cut(s)	712, 2705
Eam1104I	CTCTTC	3 cut(s)	1974, 2159, 2834
EarI	CTCTTC	3 cut(s)	1974, 2159, 2834
Ecl136II	GAGCTC	1 cut(s)	974
Eco130I	CCWWGG	4 cut(s)	6, 683, 1590, 2592
Eco147I	AGGCCT	1 cut(s)	2591
Eco24I	GRGCYC	3 cut(s)	66, 631, 976
Eco47I	GGWCC	4 cut(s)	541, 743, 2318, 2826
Eco53kI	GAGCTC	1 cut(s)	974
Eco57I	CTGAAG	2 cut(s)	2214, 2622
Eco88I	CYCGRG	3 cut(s)	932, 1382, 2351
Eco91I	GGTNACC	1 cut(s)	1118
EcoICRI	GAGCTC	1 cut(s)	974
EcoNI	CCTNNNNNAGG	1 cut(s)	384
EcoO109I	RGGNCCY	3 cut(s)	743, 2318, 2826
EcoO65I	GGTNACC	1 cut(s)	1118
EcoRI	GAATTC	1 cut(s)	394
EcoRII	CCWGG	2 cut(s)	385, 493
EcoT14I	CCWWGG	4 cut(s)	6, 683, 1590, 2592
EcoT38I	GRGCYC	3 cut(s)	66, 631, 976
ErhI	CCWWGG	4 cut(s)	6, 683, 1590, 2592
FalI	AAGNNNNNCTT	4 cut(s)	1311, 1343, 2595, 2627
FaqI	GGGAC	2 cut(s)	403, 2812
FauI	CCCGC	2 cut(s)	926, 1046
FauNDI	CATATG	2 cut(s)	978, 2900
FbaI	TGATCA	2 cut(s)	2019, 2382
FblI	GTMKAC	3 cut(s)	90, 1762, 2119
FokI	GGATG	9 cut(s)	476, 518, 762, 1027, 1457, 1661, 1862, 1883, 2516
FriOI	GRGCYC	3 cut(s)	66, 631, 976
FspBI	CTAG	8 cut(s)	224, 381, 1499, 1863, 1944, 2636, 2910, 2918
FspI	TGCGCA	1 cut(s)	1003
GlaI	GCGC	1 cut(s)	1003
GsaI	CCCAGC	1 cut(s)	656
GsuI	CTGGAG	2 cut(s)	1148, 1943
HaeIII	GGCC	5 cut(s)	714, 876, 1057, 2591, 2707
HapII	CCGG	6 cut(s)	368, 1345, 1480, 1615, 1900, 2704
HgaI	GACGC	3 cut(s)	405, 2105, 2606
HhaI	GCGC	1 cut(s)	1004
Hin6I	GCGC	1 cut(s)	1002
HinP1I	GCGC	1 cut(s)	1002
HincII	GTYRAC	3 cut(s)	1763, 1860, 2120
HindII	GTYRAC	3 cut(s)	1763, 1860, 2120
HindIII	AAGCTT	1 cut(s)	1916
HpaII	CCGG	6 cut(s)	368, 1345, 1480, 1615, 1900, 2704
HphI	GGTGA	5 cut(s)	49, 671, 2360, 2534, 2882
Hpy166II	GTNNAC	5 cut(s)	91, 1763, 1860, 2120, 2652
Hpy8I	GTNNAC	5 cut(s)	91, 1763, 1860, 2120, 2652
Hpy99I	CGWCG	1 cut(s)	2121
HpyAV	CCTTC	5 cut(s)	800, 1981, 2131, 2656, 2691
HpyCH4III	ACNGT	8 cut(s)	583, 853, 1124, 1359, 1806, 1878, 2030, 2051
HpyCH4IV	ACGT	3 cut(s)	241, 837, 2192
HpyF10VI	GCNNNNNNNGC	9 cut(s)	486, 1054, 1154, 1331, 2576, 2588, 2597, 2606, 2865
HpySE526I	ACGT	3 cut(s)	241, 837, 2192
HspAI	GCGC	1 cut(s)	1002
Ksp22I	TGATCA	2 cut(s)	2019, 2382
KspI	CCGCGG	1 cut(s)	2502
LmnI	GCTCC	2 cut(s)	1780, 2251
Lsp1109I	GCAGC	9 cut(s)	94, 218, 628, 2434, 2456, 2482, 2566, 2593, 2880
LweI	GCATC	6 cut(s)	1057, 1568, 1576, 1737, 1762, 2731
MaeI	CTAG	8 cut(s)	224, 381, 1499, 1863, 1944, 2636, 2910, 2918
MaeII	ACGT	3 cut(s)	241, 837, 2192
MaeIII	GTNAC	4 cut(s)	518, 838, 1118, 1171
MfeI	CAATTG	3 cut(s)	2309, 2378, 2483
MflI	RGATCY	5 cut(s)	988, 1638, 2206, 2638, 2665
MhlI	GDGCHC	9 cut(s)	66, 247, 631, 766, 933, 976, 1207, 1254, 1800
MlyI	GAGTC	4 cut(s)	170, 515, 711, 2843
MmeI	TCCRAC	2 cut(s)	519, 1626
MroXI	GAANNNNTTC	1 cut(s)	375
MslI	CAYNNNNRTG	4 cut(s)	759, 1670, 1953, 2657
MspA1I	CMGCKG	4 cut(s)	656, 821, 2447, 2501
MspCI	CTTAAG	1 cut(s)	2509
MspI	CCGG	6 cut(s)	368, 1345, 1480, 1615, 1900, 2704
MspR9I	CCNGG	5 cut(s)	368, 387, 495, 1346, 1615
MunI	CAATTG	3 cut(s)	2309, 2378, 2483
MvaI	CCWGG	2 cut(s)	387, 495
MvnI	CGCG	3 cut(s)	921, 1753, 2501
MwoI	GCNNNNNNNGC	9 cut(s)	486, 1054, 1154, 1331, 2576, 2588, 2597, 2606, 2865
NciI	CCSGG	3 cut(s)	368, 1346, 1615
NcoI	CCATGG	1 cut(s)	1590
NdeI	CATATG	2 cut(s)	978, 2900
NlaIV	GGNNCC	8 cut(s)	365, 543, 661, 990, 1703, 2563, 2667, 2828
NmeAIII	GCCGAG	1 cut(s)	2113
NmuCI	GTSAC	2 cut(s)	518, 838
NsbI	TGCGCA	1 cut(s)	1003
NspI	RCATGY	4 cut(s)	1157, 2290, 2779, 2863
PaeI	GCATGC	2 cut(s)	2290, 2863
PaeR7I	CTCGAG	2 cut(s)	932, 1382
PagI	TCATGA	1 cut(s)	1236
PceI	AGGCCT	1 cut(s)	2591
PciI	ACATGT	1 cut(s)	2775
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 839
PdmI	GAANNNNTTC	1 cut(s)	375
Pfl23II	CGTACG	1 cut(s)	834
PfoI	TCCNGGA	1 cut(s)	1613
PinAI	ACCGGT	1 cut(s)	1479
Ple19I	CGATCG	1 cut(s)	178
PleI	GAGTC	4 cut(s)	169, 515, 710, 2842
PpsI	GAGTC	4 cut(s)	169, 515, 710, 2842
Ppu21I	YACGTR	1 cut(s)	838
PpuMI	RGGWCCY	3 cut(s)	743, 2318, 2826
PscI	ACATGT	1 cut(s)	2775
PshBI	ATTAAT	1 cut(s)	1218
Psp124BI	GAGCTC	1 cut(s)	976
Psp5II	RGGWCCY	3 cut(s)	743, 2318, 2826
Psp6I	CCWGG	2 cut(s)	385, 493
PspEI	GGTNACC	1 cut(s)	1118
PspFI	CCCAGC	1 cut(s)	652
PspGI	CCWGG	2 cut(s)	385, 493
PspLI	CGTACG	1 cut(s)	834
PspN4I	GGNNCC	8 cut(s)	365, 543, 661, 990, 1703, 2563, 2667, 2828
PspPI	GGNCC	5 cut(s)	541, 743, 1055, 2318, 2826
PspPPI	RGGWCCY	3 cut(s)	743, 2318, 2826
PspXI	VCTCGAGB	1 cut(s)	932
PsrI	GAACNNNNNNTAC	2 cut(s)	1440, 1472
PstI	CTGCAG	2 cut(s)	36, 112
PsuI	RGATCY	5 cut(s)	988, 1638, 2206, 2638, 2665
PvuI	CGATCG	1 cut(s)	178
PvuII	CAGCTG	3 cut(s)	656, 821, 2447
RsaI	GTAC	5 cut(s)	221, 836, 1458, 1941, 2651
RsaNI	GTAC	5 cut(s)	220, 835, 1457, 1940, 2650
RseI	CAYNNNNRTG	4 cut(s)	759, 1670, 1953, 2657
SacI	GAGCTC	1 cut(s)	976
SacII	CCGCGG	1 cut(s)	2502
SalI	GTCGAC	2 cut(s)	1761, 2118
Sau96I	GGNCC	5 cut(s)	541, 743, 1055, 2318, 2826
SchI	GAGTC	4 cut(s)	170, 515, 711, 2843
ScrFI	CCNGG	5 cut(s)	368, 387, 495, 1346, 1615
SduI	GDGCHC	9 cut(s)	66, 247, 631, 766, 933, 976, 1207, 1254, 1800
SfaNI	GCATC	6 cut(s)	1057, 1568, 1576, 1737, 1762, 2731
SfcI	CTRYAG	2 cut(s)	32, 108
Sfr274I	CTCGAG	2 cut(s)	932, 1382
Sfr303I	CCGCGG	1 cut(s)	2502
SgrBI	CCGCGG	1 cut(s)	2502
SinI	GGWCC	4 cut(s)	541, 743, 2318, 2826
SlaI	CTCGAG	2 cut(s)	932, 1382
SmiMI	CAYNNNNRTG	4 cut(s)	759, 1670, 1953, 2657
SmlI	CTYRAG	5 cut(s)	932, 1382, 1811, 2127, 2509
SmoI	CTYRAG	5 cut(s)	932, 1382, 1811, 2127, 2509
SphI	GCATGC	2 cut(s)	2290, 2863
SseBI	AGGCCT	1 cut(s)	2591
SsiI	CCGC	9 cut(s)	919, 1034, 1053, 1058, 1503, 1751, 2499, 2501, 2771
SspI	AATATT	1 cut(s)	1211
SspMI	CTAG	8 cut(s)	224, 381, 1499, 1863, 1944, 2636, 2910, 2918
SstI	GAGCTC	1 cut(s)	976
StuI	AGGCCT	1 cut(s)	2591
StyD4I	CCNGG	5 cut(s)	366, 385, 493, 1344, 1613
StyI	CCWWGG	4 cut(s)	6, 683, 1590, 2592
TaaI	ACNGT	8 cut(s)	583, 853, 1124, 1359, 1806, 1878, 2030, 2051
TaiI	ACGT	3 cut(s)	244, 840, 2195
TatI	WGTACW	2 cut(s)	1456, 2649
TauI	GCSGC	4 cut(s)	1060, 1506, 1753, 2501
TscAI	CASTG	4 cut(s)	465, 766, 858, 1036
TseFI	GTSAC	2 cut(s)	518, 838
TseI	GCWGC	9 cut(s)	107, 231, 616, 2444, 2447, 2495, 2579, 2606, 2868
Tsp45I	GTSAC	2 cut(s)	518, 838
TspGWI	ACGGA	1 cut(s)	590
TspRI	CASTG	4 cut(s)	465, 766, 858, 1036
Vha464I	CTTAAG	1 cut(s)	2509
VpaK11BI	GGWCC	4 cut(s)	541, 743, 2318, 2826
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	1 cut(s)	384
XapI	RAATTY	4 cut(s)	394, 454, 1092, 1553
XceI	RCATGY	4 cut(s)	1157, 2290, 2779, 2863
XcmI	CCANNNNNNNNNTGG	1 cut(s)	13
XhoI	CTCGAG	2 cut(s)	932, 1382
XmiI	GTMKAC	3 cut(s)	90, 1762, 2119
XmnI	GAANNNNTTC	1 cut(s)	375
XspI	CTAG	8 cut(s)	224, 381, 1499, 1863, 1944, 2636, 2910, 2918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.