Rh5BG411600

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
66759095 .. 66765217
6123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG411600.1

Sequence Viewer

Length: 1818 bp
ATGGTTTTTAGTTTGTCAGTTCTTCATCAATGTTATAGAAGGGCATTCTTTCCCCACACATCATTCACACTCCTGTATTTTCATCATGTGTACACATTGAATCTGTATATAGAAATGTTAGTGTGGCATTCTTTGTATACTTTGCTAATAATCATCTCTTCACTTCACCAGAAGAAAGGCTCAAGTAGAGTATCTGAATTGGAATCTCAGATTTCTCAACTCCAGGAGGACTTGAAAAAAGCAAACAACGAGCTTCAGTCTTCCGAGTCATGCAAGAAACAAGCTCAGCAAGATGCTGAGGAATCAAAGAAGCAATTACTCGCCTTGTCATCAAAGCTCGAAGAATCTCAGCAGATTCCTGATCTTTGTATTTCTGAGGAAGCTCGTGTAATCAAGCTTCAAAAGATTTCACAAGAAAGAGAGCAAGCATGGCAGTCAGAGCTTGAGGCTGTCCAGAAGCAGCACTCAGTTGATGCAGTTGCCTTGGCATCTGCCATTGATGAGATTGAGAGGCTTAAACTGCAGCTTGAAATGGTAGCTGTATCTGAGGCTGATCAGACAAAGCATGCAGAATTAGTCAATGGAGAGCTCCAAAGCTTGAAAAAAAACTTGGCAGAAACTCTTTCACTTGTAGACAACATGAAAAACGAAATGAAGGGCTGTAAGGAAGCCGAAGCTCAAGCACAGGCACAGGTTAGTCAAACCCTGCTGCAGCTGGAATCTGCAAGAAGAACAGTGGAGACACTCAGTTCAGATGGCATGAAGGCCATGGAAGCTTACAACTCAGTTGCTTCAGAATTAGATCAGTCAAAAGCACGGGTAAATTCACTAGAAGAAATTGTTGCCAAACTCAAGGCTGACCTGAATAATGTAAGCAGCAACAATGACCTTGAGCGGGAATTTGGAGAAAAGCACGAGTCTATGGGACCAAATGAGATTGAGGCAGAGCTTTACACCTTGAAGTCTGAAGTGAAACGACTAAAATCTACTCTTGAGACTGCTGAGACCAAATACCATGAAGAACAAATTCAGAGCACTGTGCAGATAAGAAGTGCTCATGAACTGGTAGAGCAGATGAGATCTGCTTCTAGTCAGAGAGAGTGTGAACTGGAGGATGAACTGGAGAAAACCAAAGCTGGTGTTGAAGCGTTGAAGGCCCACCTAATGGATAAGGAAACTGAGTTGCAATGCATTTCAGAGGAAAACGAGGGGCTGAATTTGAAGCTTCAGAAGAGCCTGTCATGCCAGAGAGAGTATGAACTGGAAAAGGAATTGAAAGAACTGAAAAAACATGTTGCAGATTTGAAGGCTCATTTGATGGATAAAGAAACAGAATTGCAGAGTATATCAGAAGAAAATGAAATGCTGCGAGTGAAAGTCAATAAAAGCGAAATGGACAAGAGCAAGGCGAATGAGGAGGTAGTGGTGGAAGTAGAAGCGGCAAGGTGTGCTGAGAGAGAGGCTCTCATGAAGCTTGGAATTGTGATGGAGGAGGCAGATAAGAGCAGCAAGAAGGTAGCAAGGGTGACTGAACAGCTAGAGGCGGCACAGGCAGCCGGTGCAGAATTGGAGGCGGAACTGAGAAGGCTAAAGGTGCAGTCTGACCAGTGGAGGAAAGCTGCTGAGGCAGCTGCAGCCATACTTTCCTCTGGGAACGGCAAGGTCATGGAGAGAACTGTATCCATGGACAGCAACTATCATGTTCCTGGAAAGCTTGGCTCTCCTTACTCTGAAGATATGGATGATGATATGCTGAAGAAGAAAAATGGGAACATGCTGAAGAAGATAGGTGTCTTTTGGAAGAAGCCACAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

605

Amino Acids

68.47

Weight (kDa)

5.3

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1165
AccBSI CCGCTC 1 cut(s) 895
AccI GTMKAC 2 cut(s) 137, 633
AciI CCGC 4 cut(s) 895, 1439, 1544, 1574
AcsI RAATTY 4 cut(s) 823, 899, 1026, 1216
AcuI CTGAAG 7 cut(s) 239, 777, 987, 1211, 1752, 1775, 1799
AfaI GTAC 1 cut(s) 92
AfiI CCNNNNNNNGG 2 cut(s) 895, 1165
AflIII ACRYGT 1 cut(s) 1291
AjnI CCWGG 2 cut(s) 222, 1705
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
Alw21I GWGCWC 3 cut(s) 591, 1037, 1057
Alw26I GTCTC 3 cut(s) 734, 989, 998
AoxI GGCC 2 cut(s) 765, 1155
ApoI RAATTY 4 cut(s) 823, 899, 1026, 1216
Asp700I GAANNNNTTC 1 cut(s) 1026
AspS9I GGNCC 2 cut(s) 926, 1156
AsuHPI GGTGA 2 cut(s) 158, 1537
AvaII GGWCC 1 cut(s) 926
BanII GRGCYC 1 cut(s) 591
BarI GAAGNNNNNNTAC 2 cut(s) 381, 413
BauI CACGAG 2 cut(s) 384, 914
BbsI GAAGAC 1 cut(s) 252
Bbv12I GWGCWC 3 cut(s) 591, 1037, 1057
BbvCI CCTCAGC 2 cut(s) 297, 1623
BccI CCATC 3 cut(s) 749, 1312, 1480
BceAI ACGGC 1 cut(s) 1672
BciT130I CCWGG 2 cut(s) 224, 1707
BciVI GTATCC 1 cut(s) 1690
BclI TGATCA 1 cut(s) 553
BcoDI GTCTC 3 cut(s) 734, 989, 998
BfaI CTAG 3 cut(s) 830, 1089, 1538
BfmI CTRYAG 3 cut(s) 521, 710, 1632
BfuI GTATCC 1 cut(s) 1690
BglII AGATCT 1 cut(s) 1079
BlpI GCTNAGC 1 cut(s) 285
Bme1390I CCNGG 2 cut(s) 224, 1707
Bme18I GGWCC 1 cut(s) 926
BmgT120I GGNCC 2 cut(s) 926, 1156
BmiI GGNNCC 1 cut(s) 927
BmrFI CCNGG 2 cut(s) 224, 1707
BmsI GCATC 3 cut(s) 283, 463, 497
BpiI GAAGAC 1 cut(s) 252
BplI GAGNNNNNCTC 4 cut(s) 1447, 1479, 1449, 1481
BpmI CTGGAG 3 cut(s) 206, 1130, 1142
Bpu10I CCTNAGC 2 cut(s) 297, 1623
Bpu1102I GCTNAGC 1 cut(s) 285
BpuEI CTTGAG 6 cut(s) 166, 464, 663, 836, 911, 1013
BsaI GGTCTC 1 cut(s) 998
BsaJI CCNNGG 3 cut(s) 483, 768, 1683
Bsc4I CCNNNNNNNGG 2 cut(s) 895, 1165
Bse118I RCCGGY 1 cut(s) 1556
Bse1I ACTGG 5 cut(s) 1068, 1113, 1125, 1266, 1606
Bse3DI GCAATG 1 cut(s) 1193
BseBI CCWGG 2 cut(s) 224, 1707
BseDI CCNNGG 3 cut(s) 483, 768, 1683
BseGI GGATG 2 cut(s) 1120, 1747
BseLI CCNNNNNNNGG 2 cut(s) 895, 1165
BseMI GCAATG 1 cut(s) 1193
BseNI ACTGG 5 cut(s) 1068, 1113, 1125, 1266, 1606
BseRI GAGGAG 2 cut(s) 1430, 1505
BsgI GTGCAG 3 cut(s) 1061, 1581, 1616
BshFI GGCC 2 cut(s) 767, 1157
BsiHKAI GWGCWC 3 cut(s) 591, 1037, 1057
BsiSI CCGG 1 cut(s) 1557
BslFI GGGAC 1 cut(s) 939
BslI CCNNNNNNNGG 2 cut(s) 895, 1165
BsmAI GTCTC 3 cut(s) 734, 989, 998
BsmFI GGGAC 1 cut(s) 939
BsmI GAATGC 2 cut(s) 44, 127
BsnI GGCC 2 cut(s) 767, 1157
Bso31I GGTCTC 1 cut(s) 998
Bsp1286I GDGCHC 3 cut(s) 591, 1037, 1057
Bsp1407I TGTACA 1 cut(s) 90
Bsp143I GATC 4 cut(s) 361, 553, 802, 1079
Bsp1720I GCTNAGC 1 cut(s) 285
Bsp19I CCATGG 2 cut(s) 768, 1683
BspACI CCGC 4 cut(s) 895, 1439, 1544, 1574
BspANI GGCC 2 cut(s) 767, 1157
BspHI TCATGA 2 cut(s) 1057, 1467
BspLI GGNNCC 1 cut(s) 927
BspMAI CTGCAG 3 cut(s) 525, 714, 1636
BspQI GCTCTTC 1 cut(s) 1226
BspTNI GGTCTC 1 cut(s) 998
BsrBI CCGCTC 1 cut(s) 895
BsrDI GCAATG 1 cut(s) 1193
BsrFI RCCGGY 1 cut(s) 1556
BsrGI TGTACA 1 cut(s) 90
BsrI ACTGG 5 cut(s) 1068, 1113, 1125, 1266, 1606
BssAI RCCGGY 1 cut(s) 1556
BssECI CCNNGG 3 cut(s) 483, 768, 1683
BssMI GATC 4 cut(s) 361, 553, 802, 1079
BssNAI GTATAC 1 cut(s) 138
BssSI CACGAG 2 cut(s) 384, 914
BssT1I CCWWGG 3 cut(s) 483, 768, 1683
Bst1107I GTATAC 1 cut(s) 138
Bst2BI CACGAG 2 cut(s) 384, 914
Bst2UI CCWGG 2 cut(s) 224, 1707
Bst4CI ACNGT 3 cut(s) 736, 1039, 1678
Bst6I CTCTTC 2 cut(s) 163, 1226
BstAPI GCANNNNNTGC 2 cut(s) 1448, 1559
BstAUI TGTACA 1 cut(s) 90
BstC8I GCNNGC 2 cut(s) 426, 567
BstDSI CCRYGG 2 cut(s) 768, 1683
BstF5I GGATG 2 cut(s) 1120, 1747
BstKTI GATC 4 cut(s) 364, 556, 805, 1082
BstMAI GTCTC 3 cut(s) 734, 989, 998
BstMBI GATC 4 cut(s) 361, 553, 802, 1079
BstNI CCWGG 2 cut(s) 224, 1707
BstNSI RCATGY 3 cut(s) 569, 1295, 1777
BstSCI CCNGG 2 cut(s) 222, 1705
BstSFI CTRYAG 3 cut(s) 521, 710, 1632
BstV2I GAAGAC 1 cut(s) 252
BstX2I RGATCY 1 cut(s) 1079
BstYI RGATCY 1 cut(s) 1079
BstZ17I GTATAC 1 cut(s) 138
BsuI GTATCC 1 cut(s) 1690
BsuRI GGCC 2 cut(s) 767, 1157
BtgI CCRYGG 2 cut(s) 768, 1683
BtsCI GGATG 2 cut(s) 1120, 1747
BtsIMutI CAGTG 3 cut(s) 741, 1035, 1613
Cac8I GCNNGC 2 cut(s) 426, 567
CciI TCATGA 2 cut(s) 1057, 1467
Cfr10I RCCGGY 1 cut(s) 1556
Cfr13I GGNCC 2 cut(s) 926, 1156
Csp6I GTAC 1 cut(s) 91
CviQI GTAC 1 cut(s) 91
DpnI GATC 4 cut(s) 363, 555, 804, 1081
DpnII GATC 4 cut(s) 361, 553, 802, 1079
Eam1104I CTCTTC 2 cut(s) 163, 1226
EarI CTCTTC 2 cut(s) 163, 1226
EciI GGCGGA 1 cut(s) 1589
Ecl136II GAGCTC 1 cut(s) 589
Eco130I CCWWGG 3 cut(s) 483, 768, 1683
Eco24I GRGCYC 1 cut(s) 591
Eco31I GGTCTC 1 cut(s) 998
Eco47I GGWCC 1 cut(s) 926
Eco53kI GAGCTC 1 cut(s) 589
Eco57I CTGAAG 7 cut(s) 239, 777, 987, 1211, 1752, 1775, 1799
EcoICRI GAGCTC 1 cut(s) 589
EcoRII CCWGG 2 cut(s) 222, 1705
EcoT14I CCWWGG 3 cut(s) 483, 768, 1683
EcoT22I ATGCAT 1 cut(s) 1193
EcoT38I GRGCYC 1 cut(s) 591
ErhI CCWWGG 3 cut(s) 483, 768, 1683
FaqI GGGAC 1 cut(s) 939
FauI CCCGC 1 cut(s) 888
FbaI TGATCA 1 cut(s) 553
FblI GTMKAC 2 cut(s) 137, 633
FokI GGATG 2 cut(s) 1127, 1754
FriOI GRGCYC 1 cut(s) 591
FspBI CTAG 3 cut(s) 830, 1089, 1538
GsuI CTGGAG 3 cut(s) 206, 1130, 1142
HaeIII GGCC 2 cut(s) 767, 1157
HapII CCGG 1 cut(s) 1557
HindIII AAGCTT 6 cut(s) 395, 595, 774, 1223, 1472, 1712
HinfI GANTC 8 cut(s) 100, 203, 266, 302, 344, 355, 719, 917
HpaII CCGG 1 cut(s) 1557
HphI GGTGA 2 cut(s) 158, 1537
Hpy166II GTNNAC 5 cut(s) 91, 93, 138, 634, 1106
Hpy188III TCNNGA 5 cut(s) 359, 454, 992, 1058, 1468
Hpy8I GTNNAC 5 cut(s) 91, 93, 138, 634, 1106
HpyAV CCTTC 7 cut(s) 33, 649, 757, 1147, 1300, 1507, 1578
HpyCH4III ACNGT 3 cut(s) 736, 1039, 1678
Ksp22I TGATCA 1 cut(s) 553
Kzo9I GATC 4 cut(s) 361, 553, 802, 1079
LguI GCTCTTC 1 cut(s) 1226
LmnI GCTCC 1 cut(s) 594
LweI GCATC 3 cut(s) 283, 463, 497
MaeI CTAG 3 cut(s) 830, 1089, 1538
MaeIII GTNAC 1 cut(s) 1525
MalI GATC 4 cut(s) 363, 555, 804, 1081
MbiI CCGCTC 1 cut(s) 895
MboI GATC 4 cut(s) 361, 553, 802, 1079
MflI RGATCY 1 cut(s) 1079
MhlI GDGCHC 3 cut(s) 591, 1037, 1057
MlyI GAGTC 2 cut(s) 275, 926
Mph1103I ATGCAT 1 cut(s) 1193
MroXI GAANNNNTTC 1 cut(s) 1026
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 2 cut(s) 715, 1631
MspI CCGG 1 cut(s) 1557
MspR9I CCNGG 2 cut(s) 224, 1707
Mva1269I GAATGC 2 cut(s) 44, 127
MvaI CCWGG 2 cut(s) 224, 1707
NcoI CCATGG 2 cut(s) 768, 1683
NdeII GATC 4 cut(s) 361, 553, 802, 1079
NlaIV GGNNCC 1 cut(s) 927
NmuCI GTSAC 1 cut(s) 1525
NsiI ATGCAT 1 cut(s) 1193
NspI RCATGY 3 cut(s) 569, 1295, 1777
PaeI GCATGC 1 cut(s) 569
PagI TCATGA 2 cut(s) 1057, 1467
PciI ACATGT 1 cut(s) 1291
PciSI GCTCTTC 1 cut(s) 1226
PctI GAATGC 2 cut(s) 44, 127
PdmI GAANNNNTTC 1 cut(s) 1026
PfeI GAWTC 6 cut(s) 100, 203, 302, 344, 355, 719
PflMI CCANNNNNTGG 1 cut(s) 1165
PfoI TCCNGGA 2 cut(s) 222, 1705
PleI GAGTC 2 cut(s) 274, 925
PpsI GAGTC 2 cut(s) 274, 925
PscI ACATGT 1 cut(s) 1291
Psp124BI GAGCTC 1 cut(s) 591
Psp6I CCWGG 2 cut(s) 222, 1705
PspGI CCWGG 2 cut(s) 222, 1705
PspN4I GGNNCC 1 cut(s) 927
PspPI GGNCC 2 cut(s) 926, 1156
PstI CTGCAG 3 cut(s) 525, 714, 1636
PsuI RGATCY 1 cut(s) 1079
PvuII CAGCTG 2 cut(s) 715, 1631
RsaI GTAC 1 cut(s) 92
RsaNI GTAC 1 cut(s) 91
SacI GAGCTC 1 cut(s) 591
SapI GCTCTTC 1 cut(s) 1226
SaqAI TTAA 1 cut(s) 516
Sau3AI GATC 4 cut(s) 361, 553, 802, 1079
Sau96I GGNCC 2 cut(s) 926, 1156
SchI GAGTC 2 cut(s) 275, 926
ScrFI CCNGG 2 cut(s) 224, 1707
SduI GDGCHC 3 cut(s) 591, 1037, 1057
SfaNI GCATC 3 cut(s) 283, 463, 497
SfcI CTRYAG 3 cut(s) 521, 710, 1632
SinI GGWCC 1 cut(s) 926
SmlI CTYRAG 6 cut(s) 181, 443, 678, 851, 890, 992
SmoI CTYRAG 6 cut(s) 181, 443, 678, 851, 890, 992
SphI GCATGC 1 cut(s) 569
SsiI CCGC 4 cut(s) 895, 1439, 1544, 1574
SspMI CTAG 3 cut(s) 830, 1089, 1538
SstI GAGCTC 1 cut(s) 591
StyD4I CCNGG 2 cut(s) 222, 1705
StyI CCWWGG 3 cut(s) 483, 768, 1683
TaaI ACNGT 3 cut(s) 736, 1039, 1678
TaqI TCGA 1 cut(s) 339
TatI WGTACW 1 cut(s) 90
TauI GCSGC 2 cut(s) 1442, 1547
TfiI GAWTC 6 cut(s) 100, 203, 302, 344, 355, 719
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 3 cut(s) 741, 1042, 1613
TseFI GTSAC 1 cut(s) 1525
Tsp45I GTSAC 1 cut(s) 1525
TspRI CASTG 3 cut(s) 741, 1042, 1613
Van91I CCANNNNNTGG 1 cut(s) 1165
VpaK11BI GGWCC 1 cut(s) 926
XapI RAATTY 4 cut(s) 823, 899, 1026, 1216
XceI RCATGY 3 cut(s) 569, 1295, 1777
XmiI GTMKAC 2 cut(s) 137, 633
XmnI GAANNNNTTC 1 cut(s) 1026
XspI CTAG 3 cut(s) 830, 1089, 1538
Zsp2I ATGCAT 1 cut(s) 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.