Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004961

Physical Location & Seq

Genomic Coordinates Forward (+)

24748023 .. 24751871

Gene Structure 3849 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G61550.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGAAGAGAAAAAAGTAGTAAGAGCGTTAAGCGAACACCTATCACTACCTCCTCCACCATCTCCTTCTGTAGCGGTAGCCATCAACGGGAAGAAGAAGAGCAAATACGTCGTTTTTTGGGCTCTTGAGAAGTTTATACCTGAAGGTTTCACTGATTTCAAATTGCTCTATGTTCGTCCTCCTGTCTCTTACATCCCTACCCCAATGGGGATTGCGGTAGCGGTATCAGAGCTTAGAGAGGATGTAGTATCAGCTTACAAACAAGAACTGGATTGGAGCGCAAACGAGATGCTTCGTCCTTACAAGAAAATGTTTGAAAGGAGAAAGGTGCAAGTAGAGGTTTTGTTGCTGGATTCACTTGAGCCTGCAGCCGCGATAGCGGAAGAGATTGCTGGAACTGGAGTCACAAAACTGGTAATAGGAATGTCTCTCCGCGGATTCTTTTCAAGAAAGATCGATATGTCTTCTTTGATCGCAACAGCTGTTCCGAGATTCTGCACTGTCTATGTGATCTCGAAGGGGAAACTAGCTTCCGTGCGTCCTTCTGAGTCAGACGCTAGCGGAAGCATAAGATTCGAGAGAAGCAGTTCCACAAGTGGCTCCACTGATAGTCCTAGACTCCCTCCTGAGTACCAAGACTTTCTCTCCGCTGTTTCGGAAGCACAATCCCGAGTCTCTCCTTTTTCTCCTGCTCTGAAACATTCGATGGGAAGCAACGCAGTGGCTCAGATGGATACGAGTTCGAGCGGGACGGACCAAGAGGAAGTATCTACGGGGAGAGGGATGGAGATTGTCCATAGCGGTATTGAAGGAAAGAAGAATAAGGATGAGAGCTTTAGCGCTTCGTTCCCAATGGGTACAGAGGCTTACAACTCGATGAGCTGGACGTCTAAATGGAGAGATCACGAGGATAGGAGAGAGATGAGGAGCTCTTCTTCGAGTAACAACCACGATCTAGTCAATATGGACTGGGGTGCCGTGGTTCCTGAGAACTATTCTTGGGTTTCTCATACTGCCTCTCACATGTCTGATGGACTCCTCAGTGTCCATTCTATTACCGATAATCAGGTGAATCTGAACTTTGAGATAGAGAAACTGAGAGCGGAGCTGAAGCATGTTCAGGAGATGTATGCCATGGCTCAAACCGAGACTGTTGGTGCTTCAAAAAAGCTGACTGAGCTAAACCAGAGGCGGTTCGAGGAATCCGAGAAGCTTGTGGAACTGAAGGAAAAAGAAGAAGTAGCAAAAGATACAGCTTCAAAGGAGAAGCAAAGGTACGAAGAGGCGATGAAGGAAGCAGAGAAGGTTAAAGAACTCATGATGAAAGAGGCTTTACATAGAAGAGAAGCTGAGTTCAAAGCAGAGCGCGATGCTAGAGAGAAAGATAAGCTCCAGGCTTCTCTCGTCTCTCCCGGGGTCCAATACCAACATTATACCTGGGAGGAAATCGCAGCCGCAACTTCTGACTTCGCAGAAAATCTCAAGATTGGAATCGGAGCCTATGGATCAGTCTACAAATGTAATCTACATCACACGACCGGTGCTGTCAAGGTCCTTCACGCTGGAGAAACTCAGCTCTCGAAACAGTTTGATCAAGAGCTTGAGATCTTAAGCAAAATTCGACATCCTCACTTAGTCCTCCTACTAGGGGCGTGTCCCGAACGCGGCTGCCTTGTCTACGAGTACATGGACAACGGAAGCTTAGATGACCGGTTGATGCTAGTCAACGACACACCACCGATCCCTTGGTTTGAGCGTTTCAGGATCGCTTTAGAAGTCGCTTCAGCGCTTGTATTCCTCCACAAATCCAAGCCTAGACCAATCATTCACCGTGACCTCAAACCAGGAAACATCTTGCTTGACCACAACTTCGTCAGCAAACTCGGCGATGTTGGTCTCTCAACAATGGTTAACCAAGACGATGTTTCATCTAGAACTATCTTCAAGCAAACCAGTCCCGTGGGCACGCTCTGTTACATTGACCCTGAGTATCAGCGAACCGGGATTATCTCACCTAAATCGGATGTGTACTCCCTCGGAGTTGTGATTCTGCAGCTAATAACCGCGAAACCCGCCATAGCGATTACTCATATGGTGGAAGAAGCTATCGGAGACGATGCTGAATTTATGGCAATCTTGGATAAGAAAGCTGGGTCTTGGCCCATCAGTGATACTCGTGAGTTAGCCGCTTTGGGACTGTGTTGTACAGAAATGAGACGCAGAGACAGACCGGATCTTAAAGATCAAATCATCCCGGCTTTGGAACGGCTCAGGAAAGTCGCCGACAAAGCTCAAAACTTGCTTTCGAGAACTCCGTCTGGTCCTCCATCTCATTTCATTTGCCCACTTTTGAAGGGAGTAATGAACGAGCCGTGCGTGGCTGCGGATGGGTACACGTACGATCGGGAAGCTATAGAGGAATGGCTGAGACAGAAAGATACATCACCGGTGACGAATCTTCCATTGCCTAACAAGAACCTTATTGCTAATTACACTCTTTACTCAGCAATCATGGAGTGGAAATCTAATAAACGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

845

Amino Acids

94.63

Weight (kDa)

6.16

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	492 - 745	3.7e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	495 - 747	4.5e-35	Protein tyrosine and serine/threonine kinase
U-box	PF04564	776 - 845	4.6e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25160 AT5G61550 AT5G61550 AT5G61550 AT5G61550
fragaria_vesca	FvH4_7g27030
malus_domestica	MD01G1177900.v1.1 MD07G1249700.v1.1
prunus_persica	Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1
pyrus_communis	pycom01g18870 pycom07g22310
rosa_chinensis	RchiOBHm_Chr1g0373831
rosa_laevigata	RLG00000026802
rosa_multiflora	Rmu_sc0013735.1_g000010 Rmu_ssc0000206.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283970
rosa_rugosa	Rorug01G0379500
rosa_samantha	Rh1AG389100 Rh1BG353300 Rh1CG366600 Rh1DG384300
rosa_wichuraiana	Rw1G034610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	890
AccB1I	GGYRCC	1 cut(s)	974
AccBSI	CCGCTC	2 cut(s)	747, 1103
AccI	GTMKAC	2 cut(s)	1512, 1677
AccII	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
AclWI	GGATC	4 cut(s)	1513, 1735, 1772, 2241
AcsI	RAATTY	2 cut(s)	1617, 2123
AcuI	CTGAAG	4 cut(s)	162, 1130, 1244, 1767
AcyI	GRCGYC	1 cut(s)	887
AfaI	GTAC	8 cut(s)	632, 859, 1277, 1685, 2030, 2206, 2393, 2399
AfeI	AGCGCT	2 cut(s)	841, 1788
AfiI	CCNNNNNNNGG	5 cut(s)	87, 207, 1648, 1664, 2260
AflII	CTTAAG	1 cut(s)	1609
AflIII	ACRYGT	2 cut(s)	1023, 2394
AgeI	ACCGGT	3 cut(s)	1538, 1710, 2446
AgsI	TTSAA	9 cut(s)	160, 317, 447, 809, 1164, 1260, 1357, 1945, 2353
AjnI	CCWGG	3 cut(s)	1392, 1436, 1843
Alw21I	GWGCWC	1 cut(s)	932
AlwI	GGATC	4 cut(s)	1513, 1735, 1772, 2241
Ama87I	CYCGRG	2 cut(s)	669, 1412
Aor51HI	AGCGCT	2 cut(s)	841, 1788
AoxI	GGCC	1 cut(s)	2159
ApeKI	GCWGC	5 cut(s)	368, 1451, 1668, 2053, 2381
ApoI	RAATTY	2 cut(s)	1617, 2123
ArsI	GACNNNNNNTTYG	2 cut(s)	1853, 1885
AsiGI	ACCGGT	3 cut(s)	1538, 1710, 2446
Asp700I	GAANNNNTTC	1 cut(s)	586
AspLEI	GCGC	4 cut(s)	281, 842, 1368, 1789
AspS9I	GGNCC	5 cut(s)	754, 1417, 1552, 2160, 2321
AsuC2I	CCSGG	4 cut(s)	1413, 1414, 2002, 2255
AsuHPI	GGTGA	5 cut(s)	1081, 1820, 2004, 2436, 2461
AsuNHI	GCTAGC	1 cut(s)	557
AvaI	CYCGRG	2 cut(s)	669, 1412
AvaII	GGWCC	4 cut(s)	754, 1417, 1552, 2321
BaeGI	GKGCMC	1 cut(s)	1967
BanI	GGYRCC	1 cut(s)	974
BanII	GRGCYC	2 cut(s)	124, 932
BarI	GAAGNNNNNNTAC	4 cut(s)	89, 121, 1259, 1291
BauI	CACGAG	2 cut(s)	905, 2175
BbsI	GAAGAC	1 cut(s)	456
Bbv12I	GWGCWC	1 cut(s)	932
BbvI	GCAGC	5 cut(s)	380, 1463, 1655, 2065, 2368
BccI	CCATC	9 cut(s)	67, 89, 700, 724, 778, 1025, 2171, 2335, 2381
BceAI	ACGGC	3 cut(s)	962, 2282, 2356
BcgI	CGANNNNNNTGC	4 cut(s)	91, 125, 556, 590
BciT130I	CCWGG	3 cut(s)	1394, 1438, 1845
BciVI	GTATCC	1 cut(s)	727
BclI	TGATCA	1 cut(s)	1591
BcnI	CCSGG	4 cut(s)	1413, 1414, 2002, 2255
BfaI	CTAG	9 cut(s)	527, 558, 615, 956, 1374, 1646, 1721, 1815, 1932
BfmI	CTRYAG	4 cut(s)	69, 366, 2051, 2412
BfoI	RGCGCY	2 cut(s)	843, 1790
BfrI	CTTAAG	1 cut(s)	1609
BfuI	GTATCC	1 cut(s)	727
BglII	AGATCT	1 cut(s)	1605
BisI	GCNGC	9 cut(s)	369, 372, 1452, 1455, 1666, 1669, 2054, 2187, 2382
BlsI	GCNGC	9 cut(s)	370, 373, 1453, 1456, 1667, 1670, 2055, 2188, 2383
Bme1390I	CCNGG	7 cut(s)	1394, 1413, 1414, 1438, 1845, 2002, 2255
Bme18I	GGWCC	4 cut(s)	754, 1417, 1552, 2321
BmeT110I	CYCGRG	2 cut(s)	669, 1412
BmgT120I	GGNCC	5 cut(s)	754, 1417, 1552, 2160, 2321
BmiI	GGNNCC	5 cut(s)	601, 976, 984, 1418, 1498
BmrFI	CCNGG	7 cut(s)	1394, 1413, 1414, 1438, 1845, 2002, 2255
BmrI	ACTGGG	1 cut(s)	979
BmsI	GCATC	4 cut(s)	279, 1360, 1707, 2107
BmtI	GCTAGC	1 cut(s)	561
BmuI	ACTGGG	1 cut(s)	979
BpiI	GAAGAC	1 cut(s)	456
BpmI	CTGGAG	3 cut(s)	420, 1376, 1584
Bpu10I	CCTNAGC	1 cut(s)	2270
BpuEI	CTTGAG	4 cut(s)	146, 380, 1466, 1622
BpuMI	CCSGG	4 cut(s)	1413, 1414, 2002, 2255
Bsa29I	ATCGAT	1 cut(s)	456
BsaAI	YACGTR	1 cut(s)	2397
BsaBI	GATNNNNATC	1 cut(s)	1490
BsaHI	GRCGYC	1 cut(s)	887
BsaI	GGTCTC	1 cut(s)	1901
BsaJI	CCNNGG	9 cut(s)	433, 978, 1134, 1412, 1413, 1437, 1745, 1959, 2035
BsaWI	WCCGGW	4 cut(s)	1538, 1710, 2230, 2446
BsaXI	ACNNNNNCTCC	2 cut(s)	629, 659
Bsc4I	CCNNNNNNNGG	5 cut(s)	87, 207, 1648, 1664, 2260
Bse118I	RCCGGY	3 cut(s)	1538, 1710, 2446
Bse1I	ACTGG	5 cut(s)	273, 403, 417, 974, 1953
Bse3DI	GCAATG	1 cut(s)	2462
Bse8I	GATNNNNATC	1 cut(s)	1490
BseBI	CCWGG	3 cut(s)	1394, 1438, 1845
BseCI	ATCGAT	1 cut(s)	456
BseDI	CCNNGG	9 cut(s)	433, 978, 1134, 1412, 1413, 1437, 1745, 1959, 2035
BseGI	GGATG	8 cut(s)	192, 247, 789, 832, 1624, 2029, 2250, 2392
BseJI	GATNNNNATC	1 cut(s)	1490
BseLI	CCNNNNNNNGG	5 cut(s)	87, 207, 1648, 1664, 2260
BseMI	GCAATG	1 cut(s)	2462
BseNI	ACTGG	5 cut(s)	273, 403, 417, 974, 1953
BseRI	GAGGAG	3 cut(s)	42, 940, 1028
BseSI	GKGCMC	1 cut(s)	1967
BseXI	GCAGC	5 cut(s)	380, 1463, 1655, 2065, 2368
BseYI	CCCAGC	1 cut(s)	2150
BsgI	GTGCAG	1 cut(s)	481
Bsh1236I	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
Bsh1285I	CGRYCG	2 cut(s)	1539, 2404
BshFI	GGCC	1 cut(s)	2161
BshNI	GGYRCC	1 cut(s)	974
BshTI	ACCGGT	3 cut(s)	1538, 1710, 2446
BshVI	ATCGAT	1 cut(s)	456
BsiEI	CGRYCG	2 cut(s)	1539, 2404
BsiHKAI	GWGCWC	1 cut(s)	932
BsiHKCI	CYCGRG	2 cut(s)	669, 1412
BsiSI	CCGG	7 cut(s)	1413, 1539, 1711, 2001, 2231, 2255, 2447
BsiWI	CGTACG	1 cut(s)	2397
BslFI	GGGAC	4 cut(s)	763, 1641, 1941, 2208
BslI	CCNNNNNNNGG	5 cut(s)	87, 207, 1648, 1664, 2260
BsmBI	CGTCTC	3 cut(s)	1411, 2106, 2209
BsmFI	GGGAC	4 cut(s)	763, 1641, 1941, 2208
BsnI	GGCC	1 cut(s)	2161
Bso31I	GGTCTC	1 cut(s)	1901
BsoBI	CYCGRG	2 cut(s)	669, 1412
Bsp1286I	GDGCHC	3 cut(s)	124, 932, 1967
Bsp1407I	TGTACA	1 cut(s)	2204
Bsp19I	CCATGG	1 cut(s)	1134
BspANI	GGCC	1 cut(s)	2161
BspDI	ATCGAT	1 cut(s)	456
BspFNI	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
BspHI	TCATGA	1 cut(s)	1317
BspLI	GGNNCC	5 cut(s)	601, 976, 984, 1418, 1498
BspMAI	CTGCAG	2 cut(s)	370, 2055
BspOI	GCTAGC	1 cut(s)	561
BspPI	GGATC	4 cut(s)	1513, 1735, 1772, 2241
BspQI	GCTCTTC	2 cut(s)	92, 937
BspT107I	GGYRCC	1 cut(s)	974
BspTI	CTTAAG	1 cut(s)	1609
BspTNI	GGTCTC	1 cut(s)	1901
BsrBI	CCGCTC	2 cut(s)	747, 1103
BsrDI	GCAATG	1 cut(s)	2462
BsrFI	RCCGGY	3 cut(s)	1538, 1710, 2446
BsrGI	TGTACA	1 cut(s)	2204
BsrI	ACTGG	5 cut(s)	273, 403, 417, 974, 1953
BssAI	RCCGGY	3 cut(s)	1538, 1710, 2446
BssECI	CCNNGG	9 cut(s)	433, 978, 1134, 1412, 1413, 1437, 1745, 1959, 2035
BssNI	GRCGYC	1 cut(s)	887
BssSI	CACGAG	2 cut(s)	905, 2175
BssT1I	CCWWGG	2 cut(s)	1134, 1745
Bst2BI	CACGAG	2 cut(s)	905, 2175
Bst2UI	CCWGG	3 cut(s)	1394, 1438, 1845
Bst4CI	ACNGT	6 cut(s)	502, 1153, 1587, 1832, 2199, 2535
Bst6I	CTCTTC	5 cut(s)	92, 378, 937, 1275, 1336
BstACI	GRCGYC	1 cut(s)	887
BstAFI	CTTAAG	1 cut(s)	1609
BstAUI	TGTACA	1 cut(s)	2204
BstBAI	YACGTR	1 cut(s)	2397
BstC8I	GCNNGC	3 cut(s)	366, 559, 1967
BstDSI	CCRYGG	4 cut(s)	433, 978, 1134, 1959
BstF5I	GGATG	8 cut(s)	192, 247, 789, 832, 1624, 2029, 2250, 2392
BstFNI	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
BstH2I	RGCGCY	2 cut(s)	843, 1790
BstHHI	GCGC	4 cut(s)	281, 842, 1368, 1789
BstMCI	CGRYCG	2 cut(s)	1539, 2404
BstMWI	GCNNNNNNNGC	5 cut(s)	377, 1177, 1884, 2072, 2288
BstNI	CCWGG	3 cut(s)	1394, 1438, 1845
BstNSI	RCATGY	2 cut(s)	1027, 1118
BstSCI	CCNGG	7 cut(s)	1392, 1411, 1412, 1436, 1843, 2000, 2253
BstSFI	CTRYAG	4 cut(s)	69, 366, 2051, 2412
BstSLI	GKGCMC	1 cut(s)	1967
BstUI	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
BstV1I	GCAGC	5 cut(s)	380, 1463, 1655, 2065, 2368
BstV2I	GAAGAC	1 cut(s)	456
BstX2I	RGATCY	2 cut(s)	1605, 2233
BstXI	CCANNNNNNTGG	1 cut(s)	1960
BstYI	RGATCY	2 cut(s)	1605, 2233
Bsu15I	ATCGAT	1 cut(s)	456
BsuI	GTATCC	1 cut(s)	727
BsuRI	GGCC	1 cut(s)	2161
BsuTUI	ATCGAT	1 cut(s)	456
BtgI	CCRYGG	4 cut(s)	433, 978, 1134, 1959
BtgZI	GCGATG	3 cut(s)	1301, 1383, 1902
BtsCI	GGATG	8 cut(s)	192, 247, 789, 832, 1624, 2029, 2250, 2392
BtsI	GCAGTG	1 cut(s)	726
BtsIMutI	CAGTG	6 cut(s)	150, 498, 603, 726, 1048, 2173
Cac8I	GCNNGC	3 cut(s)	366, 559, 1967
CciI	TCATGA	1 cut(s)	1317
CfoI	GCGC	4 cut(s)	281, 842, 1368, 1789
Cfr10I	RCCGGY	3 cut(s)	1538, 1710, 2446
Cfr13I	GGNCC	5 cut(s)	754, 1417, 1552, 2160, 2321
Cfr42I	CCGCGG	1 cut(s)	436
Cfr9I	CCCGGG	1 cut(s)	1412
ClaI	ATCGAT	1 cut(s)	456
CseI	GACGC	3 cut(s)	527, 563, 2226
Csp6I	GTAC	8 cut(s)	631, 858, 1276, 1684, 2029, 2205, 2392, 2398
CspAI	ACCGGT	3 cut(s)	1538, 1710, 2446
CviAII	CATG	6 cut(s)	1024, 1115, 1135, 1318, 1687, 2512
CviQI	GTAC	8 cut(s)	631, 858, 1276, 1684, 2029, 2205, 2392, 2398
Eam1104I	CTCTTC	5 cut(s)	92, 378, 937, 1275, 1336
EarI	CTCTTC	5 cut(s)	92, 378, 937, 1275, 1336
Ecl136II	GAGCTC	1 cut(s)	930
Eco130I	CCWWGG	2 cut(s)	1134, 1745
Eco24I	GRGCYC	2 cut(s)	124, 932
Eco31I	GGTCTC	1 cut(s)	1901
Eco47I	GGWCC	4 cut(s)	754, 1417, 1552, 2321
Eco47III	AGCGCT	2 cut(s)	841, 1788
Eco53kI	GAGCTC	1 cut(s)	930
Eco57I	CTGAAG	4 cut(s)	162, 1130, 1244, 1767
Eco88I	CYCGRG	2 cut(s)	669, 1412
EcoICRI	GAGCTC	1 cut(s)	930
EcoO109I	RGGNCCY	1 cut(s)	1552
EcoRII	CCWGG	3 cut(s)	1392, 1436, 1843
EcoT14I	CCWWGG	2 cut(s)	1134, 1745
EcoT38I	GRGCYC	2 cut(s)	124, 932
ErhI	CCWWGG	2 cut(s)	1134, 1745
Esp3I	CGTCTC	3 cut(s)	1411, 2106, 2209
FaeI	CATG	6 cut(s)	1027, 1118, 1138, 1321, 1690, 2515
FaqI	GGGAC	4 cut(s)	763, 1641, 1941, 2208
FatI	CATG	6 cut(s)	1023, 1114, 1134, 1317, 1686, 2511
FauI	CCCGC	2 cut(s)	740, 2080
FauNDI	CATATG	1 cut(s)	2091
FbaI	TGATCA	1 cut(s)	1591
FblI	GTMKAC	2 cut(s)	1512, 1677
Fnu4HI	GCNGC	9 cut(s)	369, 372, 1452, 1455, 1666, 1669, 2054, 2187, 2382
FokI	GGATG	8 cut(s)	179, 254, 796, 839, 1611, 2036, 2237, 2399
FriOI	GRGCYC	2 cut(s)	124, 932
Fsp4HI	GCNGC	9 cut(s)	369, 372, 1452, 1455, 1666, 1669, 2054, 2187, 2382
FspBI	CTAG	9 cut(s)	527, 558, 615, 956, 1374, 1646, 1721, 1815, 1932
GlaI	GCGC	4 cut(s)	280, 841, 1367, 1788
GluI	GCNGC	9 cut(s)	369, 372, 1452, 1455, 1666, 1669, 2054, 2187, 2382
GsaI	CCCAGC	1 cut(s)	2154
GsuI	CTGGAG	3 cut(s)	420, 1376, 1584
HaeII	RGCGCY	2 cut(s)	843, 1790
HaeIII	GGCC	1 cut(s)	2161
HapII	CCGG	7 cut(s)	1413, 1539, 1711, 2001, 2231, 2255, 2447
HgaI	GACGC	3 cut(s)	527, 563, 2226
HhaI	GCGC	4 cut(s)	281, 842, 1368, 1789
Hin1I	GRCGYC	1 cut(s)	887
Hin1II	CATG	6 cut(s)	1027, 1118, 1138, 1321, 1690, 2515
Hin6I	GCGC	4 cut(s)	279, 840, 1366, 1787
HinP1I	GCGC	4 cut(s)	279, 840, 1366, 1787
HincII	GTYRAC	2 cut(s)	1726, 1912
HindII	GTYRAC	2 cut(s)	1726, 1912
HindIII	AAGCTT	2 cut(s)	1211, 1699
HpaI	GTTAAC	1 cut(s)	1912
HpaII	CCGG	7 cut(s)	1413, 1539, 1711, 2001, 2231, 2255, 2447
HphI	GGTGA	5 cut(s)	1081, 1820, 2004, 2436, 2461
Hpy166II	GTNNAC	6 cut(s)	1513, 1678, 1726, 1912, 2029, 2394
Hpy8I	GTNNAC	6 cut(s)	1513, 1678, 1726, 1912, 2029, 2394
Hpy99I	CGWCG	1 cut(s)	113
HpyCH4III	ACNGT	6 cut(s)	502, 1153, 1587, 1832, 2199, 2535
HpyCH4IV	ACGT	3 cut(s)	108, 887, 2396
HpyCH4V	TGCA	4 cut(s)	331, 368, 498, 2053
HpyF10VI	GCNNNNNNNGC	5 cut(s)	377, 1177, 1884, 2072, 2288
HpySE526I	ACGT	3 cut(s)	108, 887, 2396
Hsp92I	GRCGYC	1 cut(s)	887
Hsp92II	CATG	6 cut(s)	1027, 1118, 1138, 1321, 1690, 2515
HspAI	GCGC	4 cut(s)	279, 840, 1366, 1787
Ksp22I	TGATCA	1 cut(s)	1591
KspAI	GTTAAC	1 cut(s)	1912
KspI	CCGCGG	1 cut(s)	436
LguI	GCTCTTC	2 cut(s)	92, 937
LmnI	GCTCC	6 cut(s)	276, 605, 927, 1105, 1395, 1496
Lsp1109I	GCAGC	5 cut(s)	380, 1463, 1655, 2065, 2368
LweI	GCATC	4 cut(s)	279, 1360, 1707, 2107
MaeI	CTAG	9 cut(s)	527, 558, 615, 956, 1374, 1646, 1721, 1815, 1932
MaeII	ACGT	3 cut(s)	108, 887, 2396
MaeIII	GTNAC	5 cut(s)	403, 941, 1832, 1973, 2449
MbiI	CCGCTC	2 cut(s)	747, 1103
MflI	RGATCY	2 cut(s)	1605, 2233
MhlI	GDGCHC	3 cut(s)	124, 932, 1967
MluCI	AATT	4 cut(s)	161, 1617, 2123, 2488
MlyI	GAGTC	5 cut(s)	411, 557, 612, 681, 1029
MroXI	GAANNNNTTC	1 cut(s)	586
MseI	TTAA	5 cut(s)	29, 1308, 1610, 1911, 2238
MspA1I	CMGCKG	3 cut(s)	435, 482, 650
MspCI	CTTAAG	1 cut(s)	1609
MspI	CCGG	7 cut(s)	1413, 1539, 1711, 2001, 2231, 2255, 2447
MspR9I	CCNGG	7 cut(s)	1394, 1413, 1414, 1438, 1845, 2002, 2255
MvaI	CCWGG	3 cut(s)	1394, 1438, 1845
MvnI	CGCG	5 cut(s)	374, 435, 1368, 1665, 2066
MwoI	GCNNNNNNNGC	5 cut(s)	377, 1177, 1884, 2072, 2288
NciI	CCSGG	4 cut(s)	1413, 1414, 2002, 2255
NcoI	CCATGG	1 cut(s)	1134
NdeI	CATATG	1 cut(s)	2091
NheI	GCTAGC	1 cut(s)	557
NlaIII	CATG	6 cut(s)	1027, 1118, 1138, 1321, 1690, 2515
NlaIV	GGNNCC	5 cut(s)	601, 976, 984, 1418, 1498
NmeAIII	GCCGAG	1 cut(s)	1863
NmuCI	GTSAC	3 cut(s)	403, 1832, 2449
NspI	RCATGY	2 cut(s)	1027, 1118
PagI	TCATGA	1 cut(s)	1317
PciI	ACATGT	1 cut(s)	1023
PciSI	GCTCTTC	2 cut(s)	92, 937
PcsI	WCGNNNNNNNCGW	3 cut(s)	1203, 2312, 2373
PdmI	GAANNNNTTC	1 cut(s)	586
PfeI	GAWTC	9 cut(s)	353, 438, 492, 573, 1072, 1202, 1491, 2047, 2455
Pfl23II	CGTACG	1 cut(s)	2397
PinAI	ACCGGT	3 cut(s)	1538, 1710, 2446
PkrI	GCNGC	9 cut(s)	370, 373, 1453, 1456, 1667, 1670, 2055, 2188, 2383
Ple19I	CGATCG	1 cut(s)	2404
PleI	GAGTC	5 cut(s)	410, 556, 612, 680, 1029
PpsI	GAGTC	5 cut(s)	410, 556, 612, 680, 1029
Ppu21I	YACGTR	1 cut(s)	2397
PpuMI	RGGWCCY	1 cut(s)	1552
PscI	ACATGT	1 cut(s)	1023
Psp124BI	GAGCTC	1 cut(s)	932
Psp5II	RGGWCCY	1 cut(s)	1552
Psp6I	CCWGG	3 cut(s)	1392, 1436, 1843
PspFI	CCCAGC	1 cut(s)	2150
PspGI	CCWGG	3 cut(s)	1392, 1436, 1843
PspLI	CGTACG	1 cut(s)	2397
PspN4I	GGNNCC	5 cut(s)	601, 976, 984, 1418, 1498
PspPI	GGNCC	5 cut(s)	754, 1417, 1552, 2160, 2321
PspPPI	RGGWCCY	1 cut(s)	1552
PstI	CTGCAG	2 cut(s)	370, 2055
PsuI	RGATCY	2 cut(s)	1605, 2233
PvuI	CGATCG	1 cut(s)	2404
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	8 cut(s)	632, 859, 1277, 1685, 2030, 2206, 2393, 2399
RsaNI	GTAC	8 cut(s)	631, 858, 1276, 1684, 2029, 2205, 2392, 2398
SacI	GAGCTC	1 cut(s)	932
SacII	CCGCGG	1 cut(s)	436
SapI	GCTCTTC	2 cut(s)	92, 937
SaqAI	TTAA	5 cut(s)	29, 1308, 1610, 1911, 2238
SatI	GCNGC	9 cut(s)	369, 372, 1452, 1455, 1666, 1669, 2054, 2187, 2382
Sau96I	GGNCC	5 cut(s)	754, 1417, 1552, 2160, 2321
SchI	GAGTC	5 cut(s)	411, 557, 612, 681, 1029
ScrFI	CCNGG	7 cut(s)	1394, 1413, 1414, 1438, 1845, 2002, 2255
SduI	GDGCHC	3 cut(s)	124, 932, 1967
SfaNI	GCATC	4 cut(s)	279, 1360, 1707, 2107
SfcI	CTRYAG	4 cut(s)	69, 366, 2051, 2412
Sfr303I	CCGCGG	1 cut(s)	436
SgrAI	CRCCGGYG	1 cut(s)	2446
SgrBI	CCGCGG	1 cut(s)	436
SinI	GGWCC	4 cut(s)	754, 1417, 1552, 2321
SmaI	CCCGGG	1 cut(s)	1414
SmlI	CTYRAG	5 cut(s)	125, 359, 1481, 1601, 1609
SmoI	CTYRAG	5 cut(s)	125, 359, 1481, 1601, 1609
Sse9I	AATT	4 cut(s)	161, 1617, 2123, 2488
SspMI	CTAG	9 cut(s)	527, 558, 615, 956, 1374, 1646, 1721, 1815, 1932
SstI	GAGCTC	1 cut(s)	932
StyD4I	CCNGG	7 cut(s)	1392, 1411, 1412, 1436, 1843, 2000, 2253
StyI	CCWWGG	2 cut(s)	1134, 1745
TaaI	ACNGT	6 cut(s)	502, 1153, 1587, 1832, 2199, 2535
TaiI	ACGT	3 cut(s)	111, 890, 2399
TasI	AATT	4 cut(s)	161, 1617, 2123, 2488
TatI	WGTACW	3 cut(s)	1683, 2028, 2204
TauI	GCSGC	4 cut(s)	374, 1457, 1668, 2189
TfiI	GAWTC	9 cut(s)	353, 438, 492, 573, 1072, 1202, 1491, 2047, 2455
Tru1I	TTAA	5 cut(s)	29, 1308, 1610, 1911, 2238
Tru9I	TTAA	5 cut(s)	29, 1308, 1610, 1911, 2238
TscAI	CASTG	6 cut(s)	157, 505, 610, 726, 1048, 2173
TseFI	GTSAC	3 cut(s)	403, 1832, 2449
TseI	GCWGC	5 cut(s)	368, 1451, 1668, 2053, 2381
Tsp45I	GTSAC	3 cut(s)	403, 1832, 2449
TspDTI	ATGAA	5 cut(s)	1304, 1337, 1917, 2326, 2378
TspGWI	ACGGA	4 cut(s)	523, 767, 1710, 2304
TspMI	CCCGGG	1 cut(s)	1412
TspRI	CASTG	6 cut(s)	157, 505, 610, 726, 1048, 2173
Vha464I	CTTAAG	1 cut(s)	1609
VpaK11BI	GGWCC	4 cut(s)	754, 1417, 1552, 2321
XapI	RAATTY	2 cut(s)	1617, 2123
XbaI	TCTAGA	1 cut(s)	1931
XceI	RCATGY	2 cut(s)	1027, 1118
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1743
XmaI	CCCGGG	1 cut(s)	1412
XmiI	GTMKAC	2 cut(s)	1512, 1677
XmnI	GAANNNNTTC	1 cut(s)	586
XspI	CTAG	9 cut(s)	527, 558, 615, 956, 1374, 1646, 1721, 1815, 1932
ZraI	GACGTC	1 cut(s)	888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.