Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0004961

Physical Location & Seq

Genomic Coordinates Reverse (-)

23686984 .. 23691259

Gene Structure 4276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g22310.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGTTAACATGTTTTTGCAGAGAGAAACATAAATGGGGCTCTTTTCTCAATAGGAGTTCAGAGGGGTTCGGAAAGTTGTCACAGAGGAGTGGTAGAGCAATGGATGGGAGTGAAATTACTGGAGAAGGTGTAAATTTCTCACCTCCTCCATCAGTTGTTGGCATTGCTATCAGTGGGGACAAAAATAGCAAATACATAGTTAGGTGGGCTCTGGATAAGTTTGTTCCGGAGGGAAATGTTTCCTTCAAGTTGATTCATGTCCGGCCAAGGATCACCGGAGTTCCAACACCAATGGGAAGTCGGATTCCTATTTCGCAAGTGCGAGAGGACGTAGTAGCTGCTTATAGAAAGGAAATGGAGTGGCAGGCAAGCGAAAAGCTTGCTCCGTACAAGAAAATGTGTGCTTCTAGGAAGGTGCAAGTAGATGTTGTACTAGTTGAATCGGATGACGTTGCAAATGCAATAGCAGAAGAGGTTGCTAAGTCTGCTATATGCAATCTCGTCTTAGGTGCCCCATCTCGTGGCATTTTTAAAAGGAAACAAAACGGACTCTCCTCAAAAATCTCAGCCTGCACTCCAAGATTTTGCACCGTGTATGCTGTTTCAAAAGGAAAGTTGTCATCAGTACGCGCATCTGATGCTGAGTCAGTTGAAAGCGTCAAAGATGACAACAGTGACACGTGTTCTGTCAGCAGTTCTTCGAGTTACACGTCTAGTTCACAGACGGGCACAGATCGTGGCTCGGTTAGTTCAAACTTTCATTTCCGTTCTCCTTCTTTGCCAATACAGCGGTTTCAAGCTCTTACAAATATCAACCAGACCCTTCTTAGTACAAAGAAAAATTCAAATGACACCATCCATTCTAGATGCCATTCTCAGGATCTTGGAAGCTTTGTTACAGATTGCCAGTCATGGACTTCAGATCAAGCGTCCACCTCAGACGCGGTTACAAACTATTCACCGGAGAGCCAGGCGACTATCAACCTGGAGTTAGAAAAGCTAAGAATTGAACTCAGACATGTCAAAGGAATGTATGCAATGGCTCAAAGTGAGACTATGGATGCTTCTAGGAAGATAAACAATTTAAATAAACGCTGGTTGGAAGAAGCAGTAAGGCTCAAGGAGATAAATTCTATGGAGGAGAAAGCGATAGTATCTGCAACACAAGAAAAGGAGAAGTACGAATCTGCTAAGAGGGAAGCTGATTACATGAGAGAATGTGTCGAAAGAGAAGTTGCACAAAGGAGAGAAGCAGAGATGAAAGCCATGCATGATGCCAAGGAGAAAGAAAAACTTGAACAAGCACTTGTAGGTCCTGTGCAACAATACCAGAAGTTTTCATGGGATGAGATTGTTACATCCACCTCATCTTTCTCTGAGGATCTCAAGATTGGAATGGGAGCGTACGGAACTGTTTATAAGGGCAGCTTTCATCATACAACTGCAGCAGTGAAAGTCCTTCACTCTATAGAGAATCGCCAAACTAAGCAATTCCAGCAGGAGCTTGAGATCTTGAGCAAAATCCGCCATCCCCATTTGCTTCTCCTTCTCGGTGCATGTCCTGATCACAGTTGTCTAGTCTATGAGTACATGGAAAACGGTAGCTTGGAGGACAGGCTGCTGCAGAAAAACGGTACACCACCTATTCCTTGGTTTGAGAGGTTCCGAATTGCTTGGGAGGTCGCCTCAACTCTCGTCTTTCTTCACAGCACAAAGCCAAAACCAATCATCCATCGTGATCTGAAACCAGCAAATATCTTGCTTGATCATAACCTTGTGAGCAAGATTGGCGACGTTGGCCTTGCCACAATGCTTAATTCAGATCCTTCTATGTCCAGTATATACAACGACACAGGGCCTGTTGGCACTCTCTCTTACATAGACCCCGAGTATCAAAGGACAGGAATAATCTCTCCACAATCGGATGTTTATGCTTTCGGAATGGTGATCTTGCAGTTGCTTACTGCAAAACCAGCAAGAGCTATAACACATCTGGTAGAAACAGCTGTTAAGGATAAAAATTTGACGGATGTTTTGGACCCTAAAGCAGGTCATTGGCCAATGGAAGAGACAAGGCAGTTGGCTGAATTGGGATTGAGCTGCGCAGAGCTTCGACGCAGAGACAGACCTGACTTGAAAGAACAAGTAGTTCCTCTACTTGAGAGATTGAAAGAGGTTGCTGAGACAGCGAAAAATTCAGCTTCTGTGGTTCAATGCCTACCTCCTAACCACTTCATCTGTCCAATTCTTAAGGATGTGATGGATGAGCCTTGTGTGGCCGCAGATGGTTACACTTATGACCGCAAAGCGATCGAGAAATGGCTCGAAGAGAACGATAACTCGCCGATGACAAATTTGCCATTGCCAAACAAGAATGTTATACTAAACTATACTCTTCTTTCTGCAATTATGGAGTGGAAGACCAGAAAACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

812

Amino Acids

90.75

Weight (kDa)

7.54

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25160 AT5G61550 AT5G61550 AT5G61550 AT5G61550
fragaria_vesca	FvH4_7g27030
malus_domestica	MD01G1177900.v1.1 MD07G1249700.v1.1
prunus_persica	Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1
pyrus_communis	pycom01g18870 pycom07g22310
rosa_chinensis	RchiOBHm_Chr1g0373831
rosa_laevigata	RLG00000026802
rosa_multiflora	Rmu_sc0013735.1_g000010 Rmu_ssc0000206.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283970
rosa_rugosa	Rorug01G0379500
rosa_samantha	Rh1AG389100 Rh1BG353300 Rh1CG366600 Rh1DG384300
rosa_wichuraiana	Rw1G034610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1419
Acc16I	TGCGCA	1 cut(s)	2104
Acc36I	ACCTGC	1 cut(s)	2039
AccB1I	GGYRCC	1 cut(s)	509
AccB7I	CCANNNNNTGG	1 cut(s)	521
AccII	CGCG	2 cut(s)	630, 944
AccIII	TCCGGA	1 cut(s)	226
AciI	CCGC	5 cut(s)	790, 944, 1525, 2280, 2302
AclWI	GGATC	4 cut(s)	278, 888, 1389, 1817
AcoI	YGGCCR	3 cut(s)	263, 2057, 2277
AcsI	RAATTY	6 cut(s)	133, 841, 1129, 2020, 2194, 2353
AcuI	CTGAAG	1 cut(s)	903
AcvI	CACGTG	1 cut(s)	681
AfaI	GTAC	8 cut(s)	389, 432, 627, 832, 1181, 1406, 1589, 1636
AfiI	CCNNNNNNNGG	3 cut(s)	521, 877, 2048
AflII	CTTAAG	1 cut(s)	2249
AflIII	ACRYGT	5 cut(s)	8, 678, 680, 708, 1018
AhlI	ACTAGT	1 cut(s)	433
AjiI	CACGTC	1 cut(s)	711
AjnI	CCWGG	2 cut(s)	969, 984
Alw26I	GTCTC	4 cut(s)	1046, 2063, 2115, 2177
AlwI	GGATC	4 cut(s)	278, 888, 1389, 1817
AlwNI	CAGNNNCTG	2 cut(s)	1859, 2204
Ama87I	CYCGRG	1 cut(s)	1886
Aor13HI	TCCGGA	1 cut(s)	226
AoxI	GGCC	5 cut(s)	263, 1798, 1856, 2057, 2277
ApeKI	GCWGC	6 cut(s)	338, 1425, 1445, 1618, 1621, 2100
ApoI	RAATTY	6 cut(s)	133, 841, 1129, 2020, 2194, 2353
ArsI	GACNNNNNNTTYG	2 cut(s)	2017, 2049
Asp700I	GAANNNNTTC	1 cut(s)	238
AspLEI	GCGC	2 cut(s)	632, 2105
AspS9I	GGNCC	3 cut(s)	1313, 1856, 2038
AsuHPI	GGTGA	4 cut(s)	132, 265, 951, 1957
AvaI	CYCGRG	1 cut(s)	1886
AvaII	GGWCC	2 cut(s)	1313, 2038
BaeGI	GKGCMC	2 cut(s)	514, 731
BalI	TGGCCA	1 cut(s)	2059
BanI	GGYRCC	1 cut(s)	509
BanII	GRGCYC	2 cut(s)	41, 211
BarI	GAAGNNNNNNTAC	2 cut(s)	880, 912
BauI	CACGAG	1 cut(s)	519
BbrPI	CACGTG	1 cut(s)	681
BbsI	GAAGAC	1 cut(s)	2426
BbvI	GCAGC	6 cut(s)	325, 1437, 1457, 1605, 1608, 2087
BccI	CCATC	8 cut(s)	98, 157, 523, 863, 1536, 1740, 2254, 2279
BcgI	CGANNNNNNTGC	4 cut(s)	362, 396, 2293, 2327
BciT130I	CCWGG	2 cut(s)	971, 986
BclI	TGATCA	2 cut(s)	1564, 1765
BcoDI	GTCTC	4 cut(s)	1046, 2063, 2115, 2177
BcuI	ACTAGT	1 cut(s)	433
BfaI	CTAG	6 cut(s)	408, 434, 714, 864, 1068, 1577
BfmI	CTRYAG	3 cut(s)	1443, 1467, 1622
BfrI	CTTAAG	1 cut(s)	2249
BfuAI	ACCTGC	1 cut(s)	2039
BglII	AGATCT	1 cut(s)	1509
BisI	GCNGC	7 cut(s)	339, 1426, 1446, 1619, 1622, 2101, 2280
BlsI	GCNGC	7 cut(s)	340, 1427, 1447, 1620, 1623, 2102, 2281
Bme1390I	CCNGG	2 cut(s)	971, 986
Bme18I	GGWCC	2 cut(s)	1313, 2038
BmeT110I	CYCGRG	1 cut(s)	1886
BmgBI	CACGTC	1 cut(s)	711
BmgT120I	GGNCC	3 cut(s)	1313, 1856, 2038
BmiI	GGNNCC	3 cut(s)	511, 1664, 2040
BmrFI	CCNGG	2 cut(s)	971, 986
BmsI	GCATC	5 cut(s)	628, 641, 857, 1051, 1264
BpiI	GAAGAC	1 cut(s)	2426
BplI	GAGNNNNNCTC	2 cut(s)	1670, 1702
BpmI	CTGGAG	2 cut(s)	141, 1007
BpuEI	CTTGAG	5 cut(s)	1103, 1370, 1526, 1534, 2180
BsaAI	YACGTR	1 cut(s)	681
BsaJI	CCNNGG	3 cut(s)	266, 1278, 1649
BsaWI	WCCGGW	3 cut(s)	226, 275, 961
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 536, 566
Bsc4I	CCNNNNNNNGG	3 cut(s)	521, 877, 2048
Bse1I	ACTGG	3 cut(s)	124, 907, 1836
Bse3DI	GCAATG	4 cut(s)	105, 162, 1044, 2360
BseAI	TCCGGA	1 cut(s)	226
BseBI	CCWGG	2 cut(s)	971, 986
BseDI	CCNNGG	3 cut(s)	266, 1278, 1649
BseLI	CCNNNNNNNGG	3 cut(s)	521, 877, 2048
BseMI	GCAATG	4 cut(s)	105, 162, 1044, 2360
BseMII	CTCAG	7 cut(s)	579, 633, 890, 951, 1027, 1368, 2172
BseNI	ACTGG	3 cut(s)	124, 907, 1836
BseRI	GAGGAG	4 cut(s)	100, 135, 544, 1154
BseSI	GKGCMC	2 cut(s)	514, 731
BseXI	GCAGC	6 cut(s)	325, 1437, 1457, 1605, 1608, 2087
BsgI	GTGCAG	1 cut(s)	556
Bsh1236I	CGCG	2 cut(s)	630, 944
Bsh1285I	CGRYCG	1 cut(s)	2313
BshFI	GGCC	5 cut(s)	265, 1800, 1858, 2059, 2279
BshNI	GGYRCC	1 cut(s)	509
BsiEI	CGRYCG	1 cut(s)	2313
BsiHKCI	CYCGRG	1 cut(s)	1886
BsiSI	CCGG	4 cut(s)	227, 262, 276, 962
BsiWI	CGTACG	1 cut(s)	1404
BslFI	GGGAC	1 cut(s)	191
BslI	CCNNNNNNNGG	3 cut(s)	521, 877, 2048
BsmAI	GTCTC	4 cut(s)	1046, 2063, 2115, 2177
BsmFI	GGGAC	1 cut(s)	191
BsnI	GGCC	5 cut(s)	265, 1800, 1858, 2059, 2279
BsoBI	CYCGRG	1 cut(s)	1886
Bsp1286I	GDGCHC	4 cut(s)	41, 211, 514, 731
Bsp13I	TCCGGA	1 cut(s)	226
BspACI	CCGC	5 cut(s)	790, 944, 1525, 2280, 2302
BspANI	GGCC	5 cut(s)	265, 1800, 1858, 2059, 2279
BspCNI	CTCAG	7 cut(s)	578, 634, 889, 950, 1026, 1369, 2173
BspEI	TCCGGA	1 cut(s)	226
BspFNI	CGCG	2 cut(s)	630, 944
BspLI	GGNNCC	3 cut(s)	511, 1664, 2040
BspMAI	CTGCAG	2 cut(s)	1447, 1626
BspMI	ACCTGC	1 cut(s)	2039
BspPI	GGATC	4 cut(s)	278, 888, 1389, 1817
BspT107I	GGYRCC	1 cut(s)	509
BspTI	CTTAAG	1 cut(s)	2249
BsrDI	GCAATG	4 cut(s)	105, 162, 1044, 2360
BsrI	ACTGG	3 cut(s)	124, 907, 1836
BssECI	CCNNGG	3 cut(s)	266, 1278, 1649
BssSI	CACGAG	1 cut(s)	519
BssT1I	CCWWGG	3 cut(s)	266, 1278, 1649
Bst2BI	CACGAG	1 cut(s)	519
Bst2UI	CCWGG	2 cut(s)	971, 986
Bst4CI	ACNGT	6 cut(s)	592, 674, 1414, 1571, 1601, 1634
Bst6I	CTCTTC	4 cut(s)	465, 2061, 2322, 2400
BstAFI	CTTAAG	1 cut(s)	2249
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstBAI	YACGTR	1 cut(s)	681
BstC8I	GCNNGC	4 cut(s)	366, 370, 381, 571
BstENI	CCTNNNNNAGG	1 cut(s)	2046
BstFNI	CGCG	2 cut(s)	630, 944
BstHHI	GCGC	2 cut(s)	632, 2105
BstMAI	GTCTC	4 cut(s)	1046, 2063, 2115, 2177
BstMCI	CGRYCG	1 cut(s)	2313
BstMWI	GCNNNNNNNGC	9 cut(s)	485, 638, 787, 1495, 1524, 1788, 1797, 1973, 2186
BstNI	CCWGG	2 cut(s)	971, 986
BstNSI	RCATGY	3 cut(s)	12, 1022, 1560
BstSCI	CCNGG	2 cut(s)	969, 984
BstSFI	CTRYAG	3 cut(s)	1443, 1467, 1622
BstSLI	GKGCMC	2 cut(s)	514, 731
BstUI	CGCG	2 cut(s)	630, 944
BstV1I	GCAGC	6 cut(s)	325, 1437, 1457, 1605, 1608, 2087
BstV2I	GAAGAC	1 cut(s)	2426
BstX2I	RGATCY	4 cut(s)	880, 1381, 1509, 1822
BstYI	RGATCY	4 cut(s)	880, 1381, 1509, 1822
BsuRI	GGCC	5 cut(s)	265, 1800, 1858, 2059, 2279
BtrI	CACGTC	1 cut(s)	711
BtsI	GCAGTG	1 cut(s)	1455
BtsIMutI	CAGTG	3 cut(s)	178, 679, 1455
BveI	ACCTGC	1 cut(s)	2039
Cac8I	GCNNGC	4 cut(s)	366, 370, 381, 571
CaiI	CAGNNNCTG	2 cut(s)	1859, 2204
CfoI	GCGC	2 cut(s)	632, 2105
Cfr13I	GGNCC	3 cut(s)	1313, 1856, 2038
CseI	GACGC	4 cut(s)	646, 918, 950, 2124
Csp6I	GTAC	8 cut(s)	388, 431, 626, 831, 1180, 1405, 1588, 1635
CviQI	GTAC	8 cut(s)	388, 431, 626, 831, 1180, 1405, 1588, 1635
DraI	TTTAAA	2 cut(s)	532, 1086
EaeI	YGGCCR	3 cut(s)	263, 2057, 2277
Eam1104I	CTCTTC	4 cut(s)	465, 2061, 2322, 2400
EarI	CTCTTC	4 cut(s)	465, 2061, 2322, 2400
EciI	GGCGGA	1 cut(s)	1514
Eco130I	CCWWGG	3 cut(s)	266, 1278, 1649
Eco24I	GRGCYC	2 cut(s)	41, 211
Eco47I	GGWCC	2 cut(s)	1313, 2038
Eco57I	CTGAAG	1 cut(s)	903
Eco72I	CACGTG	1 cut(s)	681
Eco88I	CYCGRG	1 cut(s)	1886
EcoNI	CCTNNNNNAGG	1 cut(s)	2046
EcoO109I	RGGNCCY	2 cut(s)	1313, 1856
EcoRII	CCWGG	2 cut(s)	969, 984
EcoT14I	CCWWGG	3 cut(s)	266, 1278, 1649
EcoT22I	ATGCAT	1 cut(s)	1272
EcoT38I	GRGCYC	2 cut(s)	41, 211
ErhI	CCWWGG	3 cut(s)	266, 1278, 1649
FalI	AAGNNNNNCTT	4 cut(s)	1278, 1310, 1412, 1444
FaqI	GGGAC	1 cut(s)	191
FbaI	TGATCA	2 cut(s)	1564, 1765
Fnu4HI	GCNGC	7 cut(s)	339, 1426, 1446, 1619, 1622, 2101, 2280
FriOI	GRGCYC	2 cut(s)	41, 211
Fsp4HI	GCNGC	7 cut(s)	339, 1426, 1446, 1619, 1622, 2101, 2280
FspBI	CTAG	6 cut(s)	408, 434, 714, 864, 1068, 1577
FspI	TGCGCA	1 cut(s)	2104
GlaI	GCGC	2 cut(s)	631, 2104
GluI	GCNGC	7 cut(s)	339, 1426, 1446, 1619, 1622, 2101, 2280
GsuI	CTGGAG	2 cut(s)	141, 1007
HaeIII	GGCC	5 cut(s)	265, 1800, 1858, 2059, 2279
HapII	CCGG	4 cut(s)	227, 262, 276, 962
HgaI	GACGC	4 cut(s)	646, 918, 950, 2124
HhaI	GCGC	2 cut(s)	632, 2105
Hin6I	GCGC	2 cut(s)	630, 2103
HinP1I	GCGC	2 cut(s)	630, 2103
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	2 cut(s)	377, 889
HinfI	GANTC	7 cut(s)	253, 304, 440, 549, 644, 1184, 1474
HpaI	GTTAAC	1 cut(s)	6
HpaII	CCGG	4 cut(s)	227, 262, 276, 962
HphI	GGTGA	4 cut(s)	132, 265, 951, 1957
Hpy166II	GTNNAC	4 cut(s)	6, 719, 933, 1637
Hpy188III	TCNNGA	9 cut(s)	212, 227, 864, 878, 1387, 1513, 1562, 1736, 2314
Hpy8I	GTNNAC	4 cut(s)	6, 719, 933, 1637
Hpy99I	CGWCG	2 cut(s)	1796, 2118
HpyAV	CCTTC	8 cut(s)	119, 253, 406, 783, 833, 1469, 1556, 1836
HpyCH4III	ACNGT	6 cut(s)	592, 674, 1414, 1571, 1601, 1634
HpyCH4IV	ACGT	5 cut(s)	330, 450, 680, 710, 1794
HpyF10VI	GCNNNNNNNGC	9 cut(s)	485, 638, 787, 1495, 1524, 1788, 1797, 1973, 2186
HpySE526I	ACGT	5 cut(s)	330, 450, 680, 710, 1794
HspAI	GCGC	2 cut(s)	630, 2103
Kpn2I	TCCGGA	1 cut(s)	226
Ksp22I	TGATCA	2 cut(s)	1564, 1765
KspAI	GTTAAC	1 cut(s)	6
LmnI	GCTCC	3 cut(s)	388, 1400, 1501
Lsp1109I	GCAGC	6 cut(s)	325, 1437, 1457, 1605, 1608, 2087
LweI	GCATC	5 cut(s)	628, 641, 857, 1051, 1264
MaeI	CTAG	6 cut(s)	408, 434, 714, 864, 1068, 1577
MaeII	ACGT	5 cut(s)	330, 450, 680, 710, 1794
MaeIII	GTNAC	7 cut(s)	78, 674, 704, 895, 946, 1354, 2288
MboII	GAAGA	9 cut(s)	482, 690, 1084, 1115, 1694, 2078, 2339, 2387, 2431
MflI	RGATCY	4 cut(s)	880, 1381, 1509, 1822
MhlI	GDGCHC	4 cut(s)	41, 211, 514, 731
MlsI	TGGCCA	1 cut(s)	2059
MluNI	TGGCCA	1 cut(s)	2059
MlyI	GAGTC	2 cut(s)	543, 653
MmeI	TCCRAC	3 cut(s)	281, 308, 1080
Mox20I	TGGCCA	1 cut(s)	2059
Mph1103I	ATGCAT	1 cut(s)	1272
MroI	TCCGGA	1 cut(s)	226
MroXI	GAANNNNTTC	1 cut(s)	238
MscI	TGGCCA	1 cut(s)	2059
MseI	TTAA	6 cut(s)	5, 531, 1085, 1815, 2010, 2250
Msp20I	TGGCCA	1 cut(s)	2059
MspA1I	CMGCKG	2 cut(s)	790, 2006
MspCI	CTTAAG	1 cut(s)	2249
MspI	CCGG	4 cut(s)	227, 262, 276, 962
MspR9I	CCNGG	2 cut(s)	971, 986
MvaI	CCWGG	2 cut(s)	971, 986
MvnI	CGCG	2 cut(s)	630, 944
MwoI	GCNNNNNNNGC	9 cut(s)	485, 638, 787, 1495, 1524, 1788, 1797, 1973, 2186
NlaIV	GGNNCC	3 cut(s)	511, 1664, 2040
NmuCI	GTSAC	2 cut(s)	78, 674
NsbI	TGCGCA	1 cut(s)	2104
NsiI	ATGCAT	1 cut(s)	1272
NspI	RCATGY	3 cut(s)	12, 1022, 1560
PciI	ACATGT	2 cut(s)	8, 1018
PcsI	WCGNNNNNNNCGW	2 cut(s)	707, 2331
PdmI	GAANNNNTTC	1 cut(s)	238
PfeI	GAWTC	5 cut(s)	253, 304, 440, 1184, 1474
Pfl23II	CGTACG	1 cut(s)	1404
PflMI	CCANNNNNTGG	1 cut(s)	521
PkrI	GCNGC	7 cut(s)	340, 1427, 1447, 1620, 1623, 2102, 2281
Ple19I	CGATCG	1 cut(s)	2313
PleI	GAGTC	2 cut(s)	543, 652
PmaCI	CACGTG	1 cut(s)	681
PmlI	CACGTG	1 cut(s)	681
PpsI	GAGTC	2 cut(s)	543, 652
Ppu21I	YACGTR	1 cut(s)	681
PpuMI	RGGWCCY	1 cut(s)	1313
PscI	ACATGT	2 cut(s)	8, 1018
PsiI	TTATAA	1 cut(s)	1419
Psp5II	RGGWCCY	1 cut(s)	1313
Psp6I	CCWGG	2 cut(s)	969, 984
PspCI	CACGTG	1 cut(s)	681
PspGI	CCWGG	2 cut(s)	969, 984
PspLI	CGTACG	1 cut(s)	1404
PspN4I	GGNNCC	3 cut(s)	511, 1664, 2040
PspPI	GGNCC	3 cut(s)	1313, 1856, 2038
PspPPI	RGGWCCY	1 cut(s)	1313
PstI	CTGCAG	2 cut(s)	1447, 1626
PstNI	CAGNNNCTG	2 cut(s)	1859, 2204
PsuI	RGATCY	4 cut(s)	880, 1381, 1509, 1822
PvuI	CGATCG	1 cut(s)	2313
PvuII	CAGCTG	1 cut(s)	2006
RsaI	GTAC	8 cut(s)	389, 432, 627, 832, 1181, 1406, 1589, 1636
RsaNI	GTAC	8 cut(s)	388, 431, 626, 831, 1180, 1405, 1588, 1635
SaqAI	TTAA	6 cut(s)	5, 531, 1085, 1815, 2010, 2250
SatI	GCNGC	7 cut(s)	339, 1426, 1446, 1619, 1622, 2101, 2280
Sau96I	GGNCC	3 cut(s)	1313, 1856, 2038
SchI	GAGTC	2 cut(s)	543, 653
ScrFI	CCNGG	2 cut(s)	971, 986
SduI	GDGCHC	4 cut(s)	41, 211, 514, 731
SfaNI	GCATC	5 cut(s)	628, 641, 857, 1051, 1264
SfcI	CTRYAG	3 cut(s)	1443, 1467, 1622
SinI	GGWCC	2 cut(s)	1313, 2038
SmiI	ATTTAAAT	1 cut(s)	1086
SmlI	CTYRAG	6 cut(s)	1118, 1385, 1505, 1513, 2159, 2249
SmoI	CTYRAG	6 cut(s)	1118, 1385, 1505, 1513, 2159, 2249
SpeI	ACTAGT	1 cut(s)	433
SsiI	CCGC	5 cut(s)	790, 944, 1525, 2280, 2302
SspMI	CTAG	6 cut(s)	408, 434, 714, 864, 1068, 1577
StyD4I	CCNGG	2 cut(s)	969, 984
StyI	CCWWGG	3 cut(s)	266, 1278, 1649
SwaI	ATTTAAAT	1 cut(s)	1086
TaaI	ACNGT	6 cut(s)	592, 674, 1414, 1571, 1601, 1634
TaiI	ACGT	5 cut(s)	333, 453, 683, 713, 1797
TaqI	TCGA	5 cut(s)	701, 1224, 2113, 2313, 2325
TatI	WGTACW	3 cut(s)	430, 830, 1587
TauI	GCSGC	1 cut(s)	2282
TfiI	GAWTC	5 cut(s)	253, 304, 440, 1184, 1474
Tru1I	TTAA	6 cut(s)	5, 531, 1085, 1815, 2010, 2250
Tru9I	TTAA	6 cut(s)	5, 531, 1085, 1815, 2010, 2250
TscAI	CASTG	3 cut(s)	178, 679, 1455
TseFI	GTSAC	2 cut(s)	78, 674
TseI	GCWGC	6 cut(s)	338, 1425, 1445, 1618, 1621, 2100
Tsp45I	GTSAC	2 cut(s)	78, 674
TspDTI	ATGAA	6 cut(s)	245, 749, 1274, 1329, 1421, 2224
TspGWI	ACGGA	5 cut(s)	375, 561, 755, 1422, 2042
TspRI	CASTG	3 cut(s)	178, 679, 1455
Van91I	CCANNNNNTGG	1 cut(s)	521
Vha464I	CTTAAG	1 cut(s)	2249
VpaK11BI	GGWCC	2 cut(s)	1313, 2038
XagI	CCTNNNNNAGG	1 cut(s)	2046
XapI	RAATTY	6 cut(s)	133, 841, 1129, 2020, 2194, 2353
XbaI	TCTAGA	1 cut(s)	863
XceI	RCATGY	3 cut(s)	12, 1022, 1560
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1647
XmnI	GAANNNNTTC	1 cut(s)	238
XspI	CTAG	6 cut(s)	408, 434, 714, 864, 1068, 1577
Zsp2I	ATGCAT	1 cut(s)	1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.