Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004961

Physical Location & Seq

Genomic Coordinates Reverse (-)

60464903 .. 60469643

Gene Structure 4741 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG384300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGTGCTCTTGTGCTTCCTTGGGGTTCATTTTAACAGATATATAAGTGGCAGACAAATGGATCGAAGTGAAATTCTTGAAGCAGAGAACAATCTCACATTGCAGATACCTTCCCCTCTGTCGATTGTTGCCATTGCTATCAATGGCAAAAGAAAAAGCAAATACATTGTGAAGTGGGCGCTGGAGAAGTTTATTCCTGAAGGAAACCTCTTTTTCAAGTTGATACATGTCCGACCAAGAATAACTGGAATTCCAACACCAATGGGGAATCTGATTCCTATTTCAGAAGTACGAGAAGATGTAGTAGCTGCATATAGAAAGGACATGGAGTGGCAGACAAGTGAGCTGCTTCTTCCATACAAGAAAATGTGTACTCTTAAGAAGGTGCAAGTTGATGTTGTAGTCATTGAGTCAGATAATGTGGCAAATGCAATAGCAGAGGAGGTTTCTAAGTCTGCTATAAGCAATCTTGTCATAGGTGCCCCATCTCGTGGCTTGTTTACAAGGAAACAAAAGGGACTGTCCCCAAAAATCTCAGCTTGCACACCAGGATTTTGTACAGTCTATGCTGTTTCAAAAGGAAAATTGTCATCACTACGCCCATCTGAGTCCCAGTCTGTTGGAAGCATCAGAGTTGATAACAGTGACACTTCTTCTATCAGCAGTTCTTCAAGTAATGCGTCCAGCTCACAAACAGGCACAGATCGTGGATCTGTTGGTTCATACTCTCATTTTCGTTCTCCTTCCCTACCGATGCAGCGATTTCAAGCTCTTTCAAGTATGAACCAAAATCTCCTGAATACAAAAGCAAAGTCAAATGAAACCATTCATTCTAAACACCAGTCTCTGGATCTTGGGGAGGAGAAGGATGCTATGACTATGAACTCTTATCCTAGTAACTCAGATGCTGGACGTGCATTGAGTCACTCCTCTAGTACTCGAAGCTTTGTAACAGATAACCAATCATGGACTTCTGACCAAGCATCCACCTCAGATGTAGTTAAAAATTATTCATCTGAGAGCCAGGTAAATATCAACCTGGAGCTAGAAAAACTGAGAATTGAACTCAGACATGTCAAAGGAATGTATGCAATGGCTCAAAGTGAGACTATTGATGCTTCTCGGAAGATAAGCAATTTAAGTAATCGGCGGTTGGAGGAAGCAGTAAGGCTCAAGGAGATAAGTGCTATGGGGGAGAAAGCCAAAATGCTGGCAGAACAAGAGAAGGAGAAGTATGAAGCTGCTAAGATAGAAGCTGACTACATGAGACAGTGTATTGAAAGTGAAGCTTCTCAAAGGAGAGAAGCAGAAATGAAAGCCTTTCATGATGCCAAGGAAAAAGAAAAGCTTGAAAATGTACTAGTTGGTCCTGTGCAGCAATACCAGAAGTTCAGGTGGGAAGATATTGTTTCTGCAACTTCATCTTTCTCTGAGGATCTTAGGATTGGTATGGGTGCATATGGAACTGTTTATAAGAGCAACTTCCATCATACAACTGCAGCAGTAAAAGTCCTTCACTCTAAAGAGAATCACCAAACTAAGCAATTCTTGCAGGAGCTTGAAATCTTGAGCAAAATCCGACATCCCCATTTGCTTCTCCTCCTTGGTGCATGCCCTGATCATAGTTGCCTAGTGTATGAATACATGGAAAATGGTAGCTTGGATGACAGGCTGAACCAGAAAAATAACACACCCCCCATTCCTTGGTTTGAGAGGTTTCGGATTGCTTGGGAAGTAGCCTCAGCTCTAGTCTTTCTTCACAGCTCAAAGCCTAAACCAATTATCCATCGTGATCTGAAACCAGCAAACATCTTGCTTGATCATAACCTTGTGAGCAAGATTGGTGATGTCGGCCTTTCTACAATGCTTAATTTAGACCCTTCTATGTCCAGTATATACAATGAGACAGGGCCTGTTGGGACAATGTGTTACATAGACCCCGAGTATCAACGGACTGGGGTAATCTCTCCAAAATCAGATGTTTATGCTTTGGGAATGGTGATTTTGCAGTTGCTGACTGCAAAACCTGCAATAGCTATAACTCATCTGGTGGAAACAGCTATTCATGATAAAAGTTTGAAAGATGTTTTAGATCCTAAAGCTGGGTCTTGGCCAATGGAAGAGGCAAGGCAATTAGCTGAATTGGGATTGAGCTGTGCAGAGCTTCGACGTAGGGACAGACCTGACTTGAAAGAGCAAGTGGTTCCAGCACTGGAGAGATTGAAAAAGGTTGCCGATAAAGCAAGAGACTCAGCTTCCACAGTTCAGTGCCTACCTCCTAACCACTTCATCTGTCCAATTCTCAAGGATGTGATGAATGAGCCTTGTGTTGCCGCGGATGGTTACACTTATGATCGCAGGGCAATAGAGAAATGGCTTGAAGAGAATGATAACTCCCCAATGACAAACTTGGCTATGCCAAACAAACACCTAATACCAAACTATACTCTTCTTTCTGCAATTGTGGAGTGGAAGTCTATAAAACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

829

Amino Acids

92.77

Weight (kDa)

8.24

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	480 - 730	9.4e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	481 - 732	5.2e-39	Protein tyrosine and serine/threonine kinase
U-box	PF04564	760 - 826	9.8e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25160 AT5G61550 AT5G61550 AT5G61550 AT5G61550
fragaria_vesca	FvH4_7g27030
malus_domestica	MD01G1177900.v1.1 MD07G1249700.v1.1
prunus_persica	Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1 Prupe.2G273400_v2.0.a1
pyrus_communis	pycom01g18870 pycom07g22310
rosa_chinensis	RchiOBHm_Chr1g0373831
rosa_laevigata	RLG00000026802
rosa_multiflora	Rmu_sc0013735.1_g000010 Rmu_ssc0000206.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283970
rosa_rugosa	Rorug01G0379500
rosa_samantha	Rh1AG389100 Rh1BG353300 Rh1CG366600 Rh1DG384300
rosa_wichuraiana	Rw1G034610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1473
Acc36I	ACCTGC	1 cut(s)	2035
AccB1I	GGYRCC	1 cut(s)	479
AccB7I	CCANNNNNTGG	3 cut(s)	491, 847, 1704
AccII	CGCG	1 cut(s)	2336
AciI	CCGC	3 cut(s)	1150, 2334, 2336
AclWI	GGATC	5 cut(s)	69, 718, 858, 1443, 2087
AcoI	YGGCCR	1 cut(s)	2111
AcsI	RAATTY	2 cut(s)	72, 249
AcuI	CTGAAG	1 cut(s)	219
AfaI	GTAC	5 cut(s)	291, 373, 559, 937, 1359
AfiI	CCNNNNNNNGG	4 cut(s)	491, 847, 1704, 2102
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	2 cut(s)	226, 1072
AhlI	ACTAGT	1 cut(s)	1360
AjiI	CACGTC	1 cut(s)	914
AjnI	CCWGG	3 cut(s)	547, 1023, 1038
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	5 cut(s)	849, 1100, 1261, 1898, 2241
AlwI	GGATC	5 cut(s)	69, 718, 858, 1443, 2087
AlwNI	CAGNNNCTG	4 cut(s)	847, 908, 1913, 2014
Ama87I	CYCGRG	1 cut(s)	1940
AoxI	GGCC	3 cut(s)	1852, 1910, 2111
ApeKI	GCWGC	6 cut(s)	308, 346, 757, 1241, 1375, 1499
ApoI	RAATTY	2 cut(s)	72, 249
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
Asp700I	GAANNNNTTC	1 cut(s)	825
AspLEI	GCGC	1 cut(s)	181
AspS9I	GGNCC	2 cut(s)	1367, 1910
AsuHPI	GGTGA	3 cut(s)	1523, 1856, 2011
AvaI	CYCGRG	1 cut(s)	1940
AvaII	GGWCC	1 cut(s)	1367
BaeGI	GKGCMC	1 cut(s)	484
BalI	TGGCCA	1 cut(s)	2113
BanI	GGYRCC	1 cut(s)	479
BarI	GAAGNNNNNNTAC	2 cut(s)	1497, 1529
BauI	CACGAG	1 cut(s)	489
Bbv12I	GWGCWC	1 cut(s)	9
BbvCI	CCTCAGC	1 cut(s)	1741
BbvI	GCAGC	6 cut(s)	295, 333, 769, 1228, 1387, 1511
BccI	CCATC	5 cut(s)	493, 610, 1494, 1794, 2333
BciT130I	CCWGG	3 cut(s)	549, 1025, 1040
BclI	TGATCA	2 cut(s)	1618, 1819
BcoDI	GTCTC	5 cut(s)	849, 1100, 1261, 1898, 2241
BcuI	ACTAGT	1 cut(s)	1360
BfaI	CTAG	6 cut(s)	894, 933, 1046, 1361, 1631, 1748
BfmI	CTRYAG	1 cut(s)	1497
BfoI	RGCGCY	1 cut(s)	182
BfrI	CTTAAG	1 cut(s)	377
BfuAI	ACCTGC	1 cut(s)	2035
BisI	GCNGC	7 cut(s)	309, 347, 758, 1242, 1376, 1500, 2334
BlsI	GCNGC	7 cut(s)	310, 348, 759, 1243, 1377, 1501, 2335
BmcAI	AGTACT	1 cut(s)	937
Bme1390I	CCNGG	3 cut(s)	549, 1025, 1040
Bme18I	GGWCC	1 cut(s)	1367
BmeT110I	CYCGRG	1 cut(s)	1940
BmgBI	CACGTC	1 cut(s)	914
BmgT120I	GGNCC	2 cut(s)	1367, 1910
BmiI	GGNNCC	2 cut(s)	481, 2205
BmrFI	CCNGG	3 cut(s)	549, 1025, 1040
BmrI	ACTGGG	2 cut(s)	607, 1965
BmsI	GCATC	7 cut(s)	636, 744, 859, 895, 992, 1105, 1318
BmuI	ACTGGG	2 cut(s)	607, 1965
BpmI	CTGGAG	3 cut(s)	203, 1061, 2234
Bpu10I	CCTNAGC	1 cut(s)	1741
BpuEI	CTTGAG	3 cut(s)	1157, 1588, 2288
BsaJI	CCNNGG	5 cut(s)	19, 1332, 1603, 1703, 2334
BsaXI	ACNNNNNCTCC	2 cut(s)	2459, 2489
Bsc4I	CCNNNNNNNGG	4 cut(s)	491, 847, 1704, 2102
Bse1I	ACTGG	6 cut(s)	250, 613, 841, 1890, 1960, 2217
Bse3DI	GCAATG	3 cut(s)	98, 132, 1098
BseBI	CCWGG	3 cut(s)	549, 1025, 1040
BseDI	CCNNGG	5 cut(s)	19, 1332, 1603, 1703, 2334
BseGI	GGATG	6 cut(s)	874, 983, 1582, 1669, 2314, 2344
BseLI	CCNNNNNNNGG	4 cut(s)	491, 847, 1704, 2102
BseMI	GCAATG	3 cut(s)	98, 132, 1098
BseNI	ACTGG	6 cut(s)	250, 613, 841, 1890, 1960, 2217
BseRI	GAGGAG	4 cut(s)	455, 875, 919, 1589
BseSI	GKGCMC	1 cut(s)	484
BseXI	GCAGC	6 cut(s)	295, 333, 769, 1228, 1387, 1511
BseYI	CCCAGC	1 cut(s)	2102
BsgI	GTGCAG	2 cut(s)	1394, 2178
Bsh1236I	CGCG	1 cut(s)	2336
BshFI	GGCC	3 cut(s)	1854, 1912, 2113
BshNI	GGYRCC	1 cut(s)	479
BsiHKAI	GWGCWC	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	1940
BslFI	GGGAC	5 cut(s)	508, 531, 595, 1933, 2189
BslI	CCNNNNNNNGG	4 cut(s)	491, 847, 1704, 2102
BsmAI	GTCTC	5 cut(s)	849, 1100, 1261, 1898, 2241
BsmFI	GGGAC	5 cut(s)	508, 531, 595, 1933, 2189
BsnI	GGCC	3 cut(s)	1854, 1912, 2113
BsoBI	CYCGRG	1 cut(s)	1940
Bsp1286I	GDGCHC	2 cut(s)	9, 484
Bsp1407I	TGTACA	1 cut(s)	557
BspACI	CCGC	3 cut(s)	1150, 2334, 2336
BspANI	GGCC	3 cut(s)	1854, 1912, 2113
BspFNI	CGCG	1 cut(s)	2336
BspHI	TCATGA	2 cut(s)	1324, 2065
BspLI	GGNNCC	2 cut(s)	481, 2205
BspMAI	CTGCAG	1 cut(s)	1501
BspMI	ACCTGC	1 cut(s)	2035
BspPI	GGATC	5 cut(s)	69, 718, 858, 1443, 2087
BspT107I	GGYRCC	1 cut(s)	479
BspTI	CTTAAG	1 cut(s)	377
BsrDI	GCAATG	3 cut(s)	98, 132, 1098
BsrGI	TGTACA	1 cut(s)	557
BsrI	ACTGG	6 cut(s)	250, 613, 841, 1890, 1960, 2217
BssECI	CCNNGG	5 cut(s)	19, 1332, 1603, 1703, 2334
BssSI	CACGAG	1 cut(s)	489
BssT1I	CCWWGG	4 cut(s)	19, 1332, 1603, 1703
Bst2BI	CACGAG	1 cut(s)	489
Bst2UI	CCWGG	3 cut(s)	549, 1025, 1040
Bst4CI	ACNGT	6 cut(s)	522, 562, 644, 1272, 1468, 2263
Bst6I	CTCTTC	3 cut(s)	2115, 2376, 2454
BstAFI	CTTAAG	1 cut(s)	377
BstAPI	GCANNNNNTGC	2 cut(s)	1549, 2027
BstAUI	TGTACA	1 cut(s)	557
BstC8I	GCNNGC	3 cut(s)	541, 1212, 1612
BstDSI	CCRYGG	1 cut(s)	2334
BstF5I	GGATG	6 cut(s)	874, 983, 1582, 1669, 2314, 2344
BstFNI	CGCG	1 cut(s)	2336
BstH2I	RGCGCY	1 cut(s)	182
BstHHI	GCGC	1 cut(s)	181
BstMAI	GTCTC	5 cut(s)	849, 1100, 1261, 1898, 2241
BstMWI	GCNNNNNNNGC	4 cut(s)	914, 1549, 2027, 2240
BstNI	CCWGG	3 cut(s)	549, 1025, 1040
BstNSI	RCATGY	3 cut(s)	230, 1076, 1614
BstSCI	CCNGG	3 cut(s)	547, 1023, 1038
BstSFI	CTRYAG	1 cut(s)	1497
BstSLI	GKGCMC	1 cut(s)	484
BstUI	CGCG	1 cut(s)	2336
BstV1I	GCAGC	6 cut(s)	295, 333, 769, 1228, 1387, 1511
BstX2I	RGATCY	4 cut(s)	710, 850, 1435, 2092
BstXI	CCANNNNNNTGG	2 cut(s)	620, 1210
BstYI	RGATCY	4 cut(s)	710, 850, 1435, 2092
BsuRI	GGCC	3 cut(s)	1854, 1912, 2113
BtgI	CCRYGG	1 cut(s)	2334
BtrI	CACGTC	1 cut(s)	914
BtsCI	GGATG	6 cut(s)	874, 983, 1582, 1669, 2314, 2344
BtsIMutI	CAGTG	4 cut(s)	649, 1277, 2210, 2273
BveI	ACCTGC	1 cut(s)	2035
Cac8I	GCNNGC	3 cut(s)	541, 1212, 1612
CaiI	CAGNNNCTG	4 cut(s)	847, 908, 1913, 2014
CciI	TCATGA	2 cut(s)	1324, 2065
CfoI	GCGC	1 cut(s)	181
Cfr13I	GGNCC	2 cut(s)	1367, 1910
Cfr42I	CCGCGG	1 cut(s)	2337
CseI	GACGC	1 cut(s)	669
Csp6I	GTAC	5 cut(s)	290, 372, 558, 936, 1358
CviAII	CATG	9 cut(s)	227, 325, 966, 1073, 1264, 1325, 1611, 1645, 2066
CviQI	GTAC	5 cut(s)	290, 372, 558, 936, 1358
EaeI	YGGCCR	1 cut(s)	2111
Eam1104I	CTCTTC	3 cut(s)	2115, 2376, 2454
EarI	CTCTTC	3 cut(s)	2115, 2376, 2454
Eco130I	CCWWGG	4 cut(s)	19, 1332, 1603, 1703
Eco47I	GGWCC	1 cut(s)	1367
Eco57I	CTGAAG	1 cut(s)	219
Eco88I	CYCGRG	1 cut(s)	1940
EcoO109I	RGGNCCY	1 cut(s)	1910
EcoRI	GAATTC	1 cut(s)	249
EcoRII	CCWGG	3 cut(s)	547, 1023, 1038
EcoT14I	CCWWGG	4 cut(s)	19, 1332, 1603, 1703
ErhI	CCWWGG	4 cut(s)	19, 1332, 1603, 1703
FaeI	CATG	9 cut(s)	230, 328, 969, 1076, 1267, 1328, 1614, 1648, 2069
FalI	AAGNNNNNCTT	8 cut(s)	1273, 1305, 1332, 1364, 1466, 1498, 1532, 1564
FaqI	GGGAC	5 cut(s)	508, 531, 595, 1933, 2189
FatI	CATG	9 cut(s)	226, 324, 965, 1072, 1263, 1324, 1610, 1644, 2065
FauNDI	CATATG	1 cut(s)	1459
FbaI	TGATCA	2 cut(s)	1618, 1819
Fnu4HI	GCNGC	7 cut(s)	309, 347, 758, 1242, 1376, 1500, 2334
FokI	GGATG	6 cut(s)	881, 970, 1569, 1676, 2321, 2351
Fsp4HI	GCNGC	7 cut(s)	309, 347, 758, 1242, 1376, 1500, 2334
FspBI	CTAG	6 cut(s)	894, 933, 1046, 1361, 1631, 1748
GlaI	GCGC	1 cut(s)	180
GluI	GCNGC	7 cut(s)	309, 347, 758, 1242, 1376, 1500, 2334
GsaI	CCCAGC	1 cut(s)	2106
GsuI	CTGGAG	3 cut(s)	203, 1061, 2234
HaeII	RGCGCY	1 cut(s)	182
HaeIII	GGCC	3 cut(s)	1854, 1912, 2113
HgaI	GACGC	1 cut(s)	669
HhaI	GCGC	1 cut(s)	181
Hin1II	CATG	9 cut(s)	230, 328, 969, 1076, 1267, 1328, 1614, 1648, 2069
Hin6I	GCGC	1 cut(s)	179
HinP1I	GCGC	1 cut(s)	179
HindIII	AAGCTT	3 cut(s)	943, 1287, 1346
HinfI	GANTC	7 cut(s)	268, 274, 410, 608, 922, 1528, 2249
HphI	GGTGA	3 cut(s)	1523, 1856, 2011
Hpy166II	GTNNAC	2 cut(s)	372, 501
Hpy188III	TCNNGA	8 cut(s)	77, 197, 796, 848, 1325, 1567, 1790, 2066
Hpy8I	GTNNAC	2 cut(s)	372, 501
Hpy99I	CGWCG	1 cut(s)	2172
HpyAV	CCTTC	8 cut(s)	120, 194, 376, 753, 859, 1219, 1523, 1890
HpyCH4III	ACNGT	6 cut(s)	522, 562, 644, 1272, 1468, 2263
HpyCH4IV	ACGT	2 cut(s)	913, 2170
HpyF10VI	GCNNNNNNNGC	4 cut(s)	914, 1549, 2027, 2240
HpySE526I	ACGT	2 cut(s)	913, 2170
Hsp92II	CATG	9 cut(s)	230, 328, 969, 1076, 1267, 1328, 1614, 1648, 2069
HspAI	GCGC	1 cut(s)	179
Ksp22I	TGATCA	2 cut(s)	1618, 1819
KspI	CCGCGG	1 cut(s)	2337
LmnI	GCTCC	2 cut(s)	1042, 1555
Lsp1109I	GCAGC	6 cut(s)	295, 333, 769, 1228, 1387, 1511
LweI	GCATC	7 cut(s)	636, 744, 859, 895, 992, 1105, 1318
MaeI	CTAG	6 cut(s)	894, 933, 1046, 1361, 1631, 1748
MaeII	ACGT	2 cut(s)	913, 2170
MaeIII	GTNAC	6 cut(s)	644, 896, 923, 949, 1928, 2342
MfeI	CAATTG	1 cut(s)	2460
MflI	RGATCY	4 cut(s)	710, 850, 1435, 2092
MhlI	GDGCHC	2 cut(s)	9, 484
MlsI	TGGCCA	1 cut(s)	2113
MluNI	TGGCCA	1 cut(s)	2113
MlyI	GAGTC	4 cut(s)	419, 617, 931, 2243
MmeI	TCCRAC	5 cut(s)	256, 278, 601, 1134, 1603
Mox20I	TGGCCA	1 cut(s)	2113
MroXI	GAANNNNTTC	1 cut(s)	825
MscI	TGGCCA	1 cut(s)	2113
MseI	TTAA	5 cut(s)	33, 378, 1002, 1139, 1869
Msp20I	TGGCCA	1 cut(s)	2113
MspA1I	CMGCKG	1 cut(s)	2336
MspCI	CTTAAG	1 cut(s)	377
MspR9I	CCNGG	3 cut(s)	549, 1025, 1040
MunI	CAATTG	1 cut(s)	2460
MvaI	CCWGG	3 cut(s)	549, 1025, 1040
MvnI	CGCG	1 cut(s)	2336
MwoI	GCNNNNNNNGC	4 cut(s)	914, 1549, 2027, 2240
NdeI	CATATG	1 cut(s)	1459
NlaIII	CATG	9 cut(s)	230, 328, 969, 1076, 1267, 1328, 1614, 1648, 2069
NlaIV	GGNNCC	2 cut(s)	481, 2205
NmuCI	GTSAC	2 cut(s)	644, 923
NspI	RCATGY	3 cut(s)	230, 1076, 1614
PaeI	GCATGC	1 cut(s)	1614
PagI	TCATGA	2 cut(s)	1324, 2065
PciI	ACATGT	2 cut(s)	226, 1072
PdmI	GAANNNNTTC	1 cut(s)	825
PfeI	GAWTC	3 cut(s)	268, 274, 1528
PflMI	CCANNNNNTGG	3 cut(s)	491, 847, 1704
PkrI	GCNGC	7 cut(s)	310, 348, 759, 1243, 1377, 1501, 2335
PleI	GAGTC	4 cut(s)	418, 616, 930, 2243
PpsI	GAGTC	4 cut(s)	418, 616, 930, 2243
PscI	ACATGT	2 cut(s)	226, 1072
PsiI	TTATAA	1 cut(s)	1473
Psp6I	CCWGG	3 cut(s)	547, 1023, 1038
PspFI	CCCAGC	1 cut(s)	2102
PspGI	CCWGG	3 cut(s)	547, 1023, 1038
PspN4I	GGNNCC	2 cut(s)	481, 2205
PspPI	GGNCC	2 cut(s)	1367, 1910
PstI	CTGCAG	1 cut(s)	1501
PstNI	CAGNNNCTG	4 cut(s)	847, 908, 1913, 2014
PsuI	RGATCY	4 cut(s)	710, 850, 1435, 2092
RsaI	GTAC	5 cut(s)	291, 373, 559, 937, 1359
RsaNI	GTAC	5 cut(s)	290, 372, 558, 936, 1358
SacII	CCGCGG	1 cut(s)	2337
SaqAI	TTAA	5 cut(s)	33, 378, 1002, 1139, 1869
SatI	GCNGC	7 cut(s)	309, 347, 758, 1242, 1376, 1500, 2334
Sau96I	GGNCC	2 cut(s)	1367, 1910
ScaI	AGTACT	1 cut(s)	937
SchI	GAGTC	4 cut(s)	419, 617, 931, 2243
ScrFI	CCNGG	3 cut(s)	549, 1025, 1040
SduI	GDGCHC	2 cut(s)	9, 484
SfaNI	GCATC	7 cut(s)	636, 744, 859, 895, 992, 1105, 1318
SfcI	CTRYAG	1 cut(s)	1497
Sfr303I	CCGCGG	1 cut(s)	2337
SgrBI	CCGCGG	1 cut(s)	2337
SinI	GGWCC	1 cut(s)	1367
SmlI	CTYRAG	4 cut(s)	377, 1172, 1567, 2303
SmoI	CTYRAG	4 cut(s)	377, 1172, 1567, 2303
SpeI	ACTAGT	1 cut(s)	1360
SphI	GCATGC	1 cut(s)	1614
SsiI	CCGC	3 cut(s)	1150, 2334, 2336
SspMI	CTAG	6 cut(s)	894, 933, 1046, 1361, 1631, 1748
StyD4I	CCNGG	3 cut(s)	547, 1023, 1038
StyI	CCWWGG	4 cut(s)	19, 1332, 1603, 1703
TaaI	ACNGT	6 cut(s)	522, 562, 644, 1272, 1468, 2263
TaiI	ACGT	2 cut(s)	916, 2173
TaqI	TCGA	4 cut(s)	64, 122, 940, 2167
TatI	WGTACW	4 cut(s)	371, 557, 935, 1357
TauI	GCSGC	1 cut(s)	2336
TfiI	GAWTC	3 cut(s)	268, 274, 1528
Tru1I	TTAA	5 cut(s)	33, 378, 1002, 1139, 1869
Tru9I	TTAA	5 cut(s)	33, 378, 1002, 1139, 1869
TscAI	CASTG	4 cut(s)	649, 1277, 2217, 2273
TseFI	GTSAC	2 cut(s)	644, 923
TseI	GCWGC	6 cut(s)	308, 346, 757, 1241, 1375, 1499
Tsp45I	GTSAC	2 cut(s)	644, 923
TspGWI	ACGGA	1 cut(s)	1966
TspRI	CASTG	4 cut(s)	649, 1277, 2217, 2273
Van91I	CCANNNNNTGG	3 cut(s)	491, 847, 1704
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	1367
XapI	RAATTY	2 cut(s)	72, 249
XceI	RCATGY	3 cut(s)	230, 1076, 1614
XmnI	GAANNNNTTC	1 cut(s)	825
XspI	CTAG	6 cut(s)	894, 933, 1046, 1361, 1631, 1748
ZrmI	AGTACT	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.