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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62550 |
| fragaria_vesca | FvH4_5g15300 FvH4_5g15300 FvH4_5g15300 |
| malus_domestica | MD01G1041800.v1.1 MD06G1189400.v1.1 MD14G1196400.v1.1 |
| prunus_persica | Prupe.5G188200_v2.0.a1 |
| pyrus_communis | pycom06g16830 pycom14g16310 |
| rosa_chinensis | RchiOBHm_Chr7g0180761 |
| rosa_laevigata | RLG00000005232 |
| rosa_multiflora | Rmu_sc0007457.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00272560 |
| rosa_rugosa | Rorug06G0435800 |
| rosa_samantha | Rh7AG037500 Rh7BG037200 Rh7CG038900 Rh7DG037400 |
| rosa_wichuraiana | Rw7G003090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 646, 1212 |
| AclWI | GGATC | 2 cut(s) | 87, 1310 |
| AcsI | RAATTY | 1 cut(s) | 748 |
| AcuI | CTGAAG | 5 cut(s) | 336, 657, 705, 1143, 1412 |
| AfaI | GTAC | 2 cut(s) | 181, 626 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 102, 1107 |
| AgsI | TTSAA | 8 cut(s) | 51, 358, 419, 559, 798, 1251, 1262, 1331 |
| AhlI | ACTAGT | 1 cut(s) | 668 |
| AjnI | CCWGG | 3 cut(s) | 742, 1313, 1455 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 229, 261 |
| AluBI | AGCT | 8 cut(s) | 30, 64, 229, 354, 460, 464, 683, 695 |
| AluI | AGCT | 8 cut(s) | 30, 64, 229, 354, 460, 464, 683, 695 |
| Alw21I | GWGCWC | 1 cut(s) | 32 |
| Alw26I | GTCTC | 7 cut(s) | 382, 659, 664, 705, 1050, 1178, 1287 |
| AlwI | GGATC | 2 cut(s) | 87, 1310 |
| ApeKI | GCWGC | 3 cut(s) | 35, 294, 297 |
| ApoI | RAATTY | 1 cut(s) | 748 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 244 |
| AsuHPI | GGTGA | 2 cut(s) | 1222, 1388 |
| AsuII | TTCGAA | 1 cut(s) | 752 |
| AsuNHI | GCTAGC | 1 cut(s) | 460 |
| BaeGI | GKGCMC | 1 cut(s) | 154 |
| BanII | GRGCYC | 2 cut(s) | 32, 1113 |
| BauI | CACGAG | 1 cut(s) | 153 |
| BbsI | GAAGAC | 4 cut(s) | 247, 420, 426, 1455 |
| Bbv12I | GWGCWC | 1 cut(s) | 32 |
| BbvCI | CCTCAGC | 1 cut(s) | 65 |
| BbvI | GCAGC | 3 cut(s) | 22, 306, 309 |
| BccI | CCATC | 3 cut(s) | 581, 1121, 1126 |
| BciT130I | CCWGG | 3 cut(s) | 744, 1315, 1457 |
| BciVI | GTATCC | 1 cut(s) | 81 |
| BcoDI | GTCTC | 7 cut(s) | 382, 659, 664, 705, 1050, 1178, 1287 |
| BcuI | ACTAGT | 1 cut(s) | 668 |
| BfaI | CTAG | 6 cut(s) | 348, 381, 461, 669, 1038, 1229 |
| BfuAI | ACCTGC | 2 cut(s) | 646, 1212 |
| BfuI | GTATCC | 1 cut(s) | 81 |
| BisI | GCNGC | 3 cut(s) | 36, 295, 298 |
| BlsI | GCNGC | 3 cut(s) | 37, 296, 299 |
| Bme1390I | CCNGG | 3 cut(s) | 744, 1315, 1457 |
| BmiI | GGNNCC | 1 cut(s) | 1112 |
| BmrFI | CCNGG | 3 cut(s) | 744, 1315, 1457 |
| BmsI | GCATC | 5 cut(s) | 589, 772, 817, 862, 952 |
| BmtI | GCTAGC | 1 cut(s) | 464 |
| BpiI | GAAGAC | 4 cut(s) | 247, 420, 426, 1455 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 58, 90 |
| BpmI | CTGGAG | 1 cut(s) | 1070 |
| Bpu10I | CCTNAGC | 1 cut(s) | 65 |
| Bpu14I | TTCGAA | 1 cut(s) | 752 |
| BsaI | GGTCTC | 1 cut(s) | 664 |
| BsaJI | CCNNGG | 3 cut(s) | 96, 471, 1313 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 102, 1107 |
| Bse118I | RCCGGY | 1 cut(s) | 1207 |
| BseBI | CCWGG | 3 cut(s) | 744, 1315, 1457 |
| BseDI | CCNNGG | 3 cut(s) | 96, 471, 1313 |
| BseGI | GGATG | 3 cut(s) | 592, 1279, 1452 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 102, 1107 |
| BseMII | CTCAG | 5 cut(s) | 56, 91, 403, 1287, 1298 |
| BseSI | GKGCMC | 1 cut(s) | 154 |
| BseXI | GCAGC | 3 cut(s) | 22, 306, 309 |
| BsgI | GTGCAG | 2 cut(s) | 674, 1461 |
| BsiHKAI | GWGCWC | 1 cut(s) | 32 |
| BsiSI | CCGG | 1 cut(s) | 1208 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 102, 1107 |
| BsmAI | GTCTC | 7 cut(s) | 382, 659, 664, 705, 1050, 1178, 1287 |
| Bso31I | GGTCTC | 1 cut(s) | 664 |
| Bsp119I | TTCGAA | 1 cut(s) | 752 |
| Bsp1286I | GDGCHC | 3 cut(s) | 32, 154, 1113 |
| Bsp1407I | TGTACA | 1 cut(s) | 624 |
| Bsp143I | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| BspCNI | CTCAG | 5 cut(s) | 57, 90, 402, 1288, 1297 |
| BspLI | GGNNCC | 1 cut(s) | 1112 |
| BspMI | ACCTGC | 2 cut(s) | 646, 1212 |
| BspOI | GCTAGC | 1 cut(s) | 464 |
| BspPI | GGATC | 2 cut(s) | 87, 1310 |
| BspQI | GCTCTTC | 2 cut(s) | 519, 996 |
| BspT104I | TTCGAA | 1 cut(s) | 752 |
| BspTNI | GGTCTC | 1 cut(s) | 664 |
| BsrFI | RCCGGY | 1 cut(s) | 1207 |
| BsrGI | TGTACA | 1 cut(s) | 624 |
| BssAI | RCCGGY | 1 cut(s) | 1207 |
| BssECI | CCNNGG | 3 cut(s) | 96, 471, 1313 |
| BssMI | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| BssSI | CACGAG | 1 cut(s) | 153 |
| BssT1I | CCWWGG | 1 cut(s) | 96 |
| Bst2BI | CACGAG | 1 cut(s) | 153 |
| Bst2UI | CCWGG | 3 cut(s) | 744, 1315, 1457 |
| Bst4CI | ACNGT | 8 cut(s) | 187, 624, 802, 1021, 1147, 1189, 1258, 1429 |
| Bst6I | CTCTTC | 5 cut(s) | 203, 519, 546, 996, 1329 |
| BstAUI | TGTACA | 1 cut(s) | 624 |
| BstBI | TTCGAA | 1 cut(s) | 752 |
| BstC8I | GCNNGC | 3 cut(s) | 462, 594, 1008 |
| BstDSI | CCRYGG | 1 cut(s) | 471 |
| BstF5I | GGATG | 3 cut(s) | 592, 1279, 1452 |
| BstKTI | GATC | 9 cut(s) | 83, 95, 220, 335, 395, 489, 771, 1140, 1305 |
| BstMAI | GTCTC | 7 cut(s) | 382, 659, 664, 705, 1050, 1178, 1287 |
| BstMBI | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 518 |
| BstNI | CCWGG | 3 cut(s) | 744, 1315, 1457 |
| BstSCI | CCNGG | 3 cut(s) | 742, 1313, 1455 |
| BstSLI | GKGCMC | 1 cut(s) | 154 |
| BstV1I | GCAGC | 3 cut(s) | 22, 306, 309 |
| BstV2I | GAAGAC | 4 cut(s) | 247, 420, 426, 1455 |
| BstX2I | RGATCY | 1 cut(s) | 92 |
| BstYI | RGATCY | 1 cut(s) | 92 |
| BsuI | GTATCC | 1 cut(s) | 81 |
| BtgI | CCRYGG | 1 cut(s) | 471 |
| BtsCI | GGATG | 3 cut(s) | 592, 1279, 1452 |
| BtsIMutI | CAGTG | 2 cut(s) | 294, 405 |
| BveI | ACCTGC | 2 cut(s) | 646, 1212 |
| Cac8I | GCNNGC | 3 cut(s) | 462, 594, 1008 |
| Cfr10I | RCCGGY | 1 cut(s) | 1207 |
| CseI | GACGC | 1 cut(s) | 289 |
| Csp6I | GTAC | 2 cut(s) | 180, 625 |
| CviAII | CATG | 2 cut(s) | 518, 583 |
| CviQI | GTAC | 2 cut(s) | 180, 625 |
| DpnI | GATC | 9 cut(s) | 82, 94, 219, 334, 394, 488, 770, 1139, 1304 |
| DpnII | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| DraI | TTTAAA | 1 cut(s) | 505 |
| Eam1104I | CTCTTC | 5 cut(s) | 203, 519, 546, 996, 1329 |
| EarI | CTCTTC | 5 cut(s) | 203, 519, 546, 996, 1329 |
| Ecl136II | GAGCTC | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 1 cut(s) | 96 |
| Eco24I | GRGCYC | 2 cut(s) | 32, 1113 |
| Eco31I | GGTCTC | 1 cut(s) | 664 |
| Eco53kI | GAGCTC | 1 cut(s) | 30 |
| Eco57I | CTGAAG | 5 cut(s) | 336, 657, 705, 1143, 1412 |
| EcoICRI | GAGCTC | 1 cut(s) | 30 |
| EcoRII | CCWGG | 3 cut(s) | 742, 1313, 1455 |
| EcoT14I | CCWWGG | 1 cut(s) | 96 |
| EcoT38I | GRGCYC | 2 cut(s) | 32, 1113 |
| ErhI | CCWWGG | 1 cut(s) | 96 |
| FaeI | CATG | 2 cut(s) | 521, 586 |
| FaiI | YATR | 7 cut(s) | 140, 453, 519, 567, 584, 605, 698 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 259, 291 |
| FatI | CATG | 2 cut(s) | 517, 582 |
| Fnu4HI | GCNGC | 3 cut(s) | 36, 295, 298 |
| FokI | GGATG | 3 cut(s) | 599, 1286, 1439 |
| FriOI | GRGCYC | 2 cut(s) | 32, 1113 |
| Fsp4HI | GCNGC | 3 cut(s) | 36, 295, 298 |
| FspBI | CTAG | 6 cut(s) | 348, 381, 461, 669, 1038, 1229 |
| GluI | GCNGC | 3 cut(s) | 36, 295, 298 |
| GsuI | CTGGAG | 1 cut(s) | 1070 |
| HapII | CCGG | 1 cut(s) | 1208 |
| HgaI | GACGC | 1 cut(s) | 289 |
| Hin1II | CATG | 2 cut(s) | 521, 586 |
| HindIII | AAGCTT | 1 cut(s) | 352 |
| HpaII | CCGG | 1 cut(s) | 1208 |
| HphI | GGTGA | 2 cut(s) | 1222, 1388 |
| Hpy166II | GTNNAC | 2 cut(s) | 1066, 1267 |
| Hpy188III | TCNNGA | 8 cut(s) | 119, 191, 724, 772, 1049, 1094, 1141, 1331 |
| Hpy8I | GTNNAC | 2 cut(s) | 1066, 1267 |
| Hpy99I | CGWCG | 1 cut(s) | 576 |
| HpyAV | CCTTC | 7 cut(s) | 95, 141, 601, 908, 1100, 1167, 1367 |
| HpyCH4III | ACNGT | 8 cut(s) | 187, 624, 802, 1021, 1147, 1189, 1258, 1429 |
| HpyCH4IV | ACGT | 1 cut(s) | 1171 |
| HpyCH4V | TGCA | 8 cut(s) | 521, 655, 790, 835, 880, 925, 970, 1442 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 518 |
| HpySE526I | ACGT | 1 cut(s) | 1171 |
| Hsp92II | CATG | 2 cut(s) | 521, 586 |
| Kzo9I | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| LguI | GCTCTTC | 2 cut(s) | 519, 996 |
| LmnI | GCTCC | 1 cut(s) | 1116 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 306, 309 |
| LweI | GCATC | 5 cut(s) | 589, 772, 817, 862, 952 |
| MaeI | CTAG | 6 cut(s) | 348, 381, 461, 669, 1038, 1229 |
| MaeII | ACGT | 1 cut(s) | 1171 |
| MaeIII | GTNAC | 9 cut(s) | 301, 400, 802, 847, 892, 937, 982, 1021, 1141 |
| MalI | GATC | 9 cut(s) | 82, 94, 219, 334, 394, 488, 770, 1139, 1304 |
| MboI | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| MflI | RGATCY | 1 cut(s) | 92 |
| MhlI | GDGCHC | 3 cut(s) | 32, 154, 1113 |
| MluCI | AATT | 6 cut(s) | 46, 271, 560, 748, 1246, 1350 |
| MlyI | GAGTC | 3 cut(s) | 397, 442, 1346 |
| MmeI | TCCRAC | 1 cut(s) | 993 |
| MnlI | CCTC | 8 cut(s) | 60, 84, 120, 442, 1045, 1078, 1206, 1293 |
| MroXI | GAANNNNTTC | 1 cut(s) | 244 |
| MseI | TTAA | 6 cut(s) | 282, 504, 1152, 1353, 1383, 1462 |
| MspI | CCGG | 1 cut(s) | 1208 |
| MspR9I | CCNGG | 3 cut(s) | 744, 1315, 1457 |
| MvaI | CCWGG | 3 cut(s) | 744, 1315, 1457 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 518 |
| NdeII | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| NheI | GCTAGC | 1 cut(s) | 460 |
| NlaIII | CATG | 2 cut(s) | 521, 586 |
| NlaIV | GGNNCC | 1 cut(s) | 1112 |
| NmuCI | GTSAC | 8 cut(s) | 301, 400, 802, 847, 892, 937, 982, 1141 |
| NspV | TTCGAA | 1 cut(s) | 752 |
| PciSI | GCTCTTC | 2 cut(s) | 519, 996 |
| PdmI | GAANNNNTTC | 1 cut(s) | 244 |
| PfoI | TCCNGGA | 1 cut(s) | 742 |
| PkrI | GCNGC | 3 cut(s) | 37, 296, 299 |
| PleI | GAGTC | 3 cut(s) | 397, 442, 1345 |
| PpsI | GAGTC | 3 cut(s) | 397, 442, 1345 |
| Psp124BI | GAGCTC | 1 cut(s) | 32 |
| Psp6I | CCWGG | 3 cut(s) | 742, 1313, 1455 |
| PspGI | CCWGG | 3 cut(s) | 742, 1313, 1455 |
| PspN4I | GGNNCC | 1 cut(s) | 1112 |
| PsuI | RGATCY | 1 cut(s) | 92 |
| RsaI | GTAC | 2 cut(s) | 181, 626 |
| RsaNI | GTAC | 2 cut(s) | 180, 625 |
| SacI | GAGCTC | 1 cut(s) | 32 |
| SapI | GCTCTTC | 2 cut(s) | 519, 996 |
| SaqAI | TTAA | 6 cut(s) | 282, 504, 1152, 1353, 1383, 1462 |
| SatI | GCNGC | 3 cut(s) | 36, 295, 298 |
| Sau3AI | GATC | 9 cut(s) | 80, 92, 217, 332, 392, 486, 768, 1137, 1302 |
| SchI | GAGTC | 3 cut(s) | 397, 442, 1346 |
| ScrFI | CCNGG | 3 cut(s) | 744, 1315, 1457 |
| SduI | GDGCHC | 3 cut(s) | 32, 154, 1113 |
| SfaNI | GCATC | 5 cut(s) | 589, 772, 817, 862, 952 |
| SfuI | TTCGAA | 1 cut(s) | 752 |
| SpeI | ACTAGT | 1 cut(s) | 668 |
| Sse9I | AATT | 6 cut(s) | 46, 271, 560, 748, 1246, 1350 |
| SspMI | CTAG | 6 cut(s) | 348, 381, 461, 669, 1038, 1229 |
| SstI | GAGCTC | 1 cut(s) | 32 |
| StyD4I | CCNGG | 3 cut(s) | 742, 1313, 1455 |
| StyI | CCWWGG | 1 cut(s) | 96 |
| TaaI | ACNGT | 8 cut(s) | 187, 624, 802, 1021, 1147, 1189, 1258, 1429 |
| TaiI | ACGT | 1 cut(s) | 1174 |
| TaqI | TCGA | 6 cut(s) | 59, 220, 248, 406, 485, 752 |
| TasI | AATT | 6 cut(s) | 46, 271, 560, 748, 1246, 1350 |
| TatI | WGTACW | 2 cut(s) | 179, 624 |
| Tru1I | TTAA | 6 cut(s) | 282, 504, 1152, 1353, 1383, 1462 |
| Tru9I | TTAA | 6 cut(s) | 282, 504, 1152, 1353, 1383, 1462 |
| TscAI | CASTG | 2 cut(s) | 294, 405 |
| TseFI | GTSAC | 8 cut(s) | 301, 400, 802, 847, 892, 937, 982, 1141 |
| TseI | GCWGC | 3 cut(s) | 35, 294, 297 |
| Tsp45I | GTSAC | 8 cut(s) | 301, 400, 802, 847, 892, 937, 982, 1141 |
| TspDTI | ATGAA | 9 cut(s) | 375, 506, 560, 620, 720, 831, 876, 921, 966 |
| TspGWI | ACGGA | 2 cut(s) | 460, 1103 |
| TspRI | CASTG | 2 cut(s) | 294, 405 |
| XapI | RAATTY | 1 cut(s) | 748 |
| XmnI | GAANNNNTTC | 1 cut(s) | 244 |
| XspI | CTAG | 6 cut(s) | 348, 381, 461, 669, 1038, 1229 |