RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63630 AT5G63630 |
| fragaria_vesca | FvH4_7g16280 |
| malus_domestica | MD01G1079300.v1.1 MD07G1148200.v1.1 |
| prunus_persica | Prupe.2G186500_v2.0.a1 |
| pyrus_communis | pycom01g10760 pycom07g14720 |
| rosa_chinensis | RchiOBHm_Chr1g0359291 |
| rosa_laevigata | RLG00000027883 |
| rosa_multiflora | Rmu_co8196408.1_g000001 Rmu_ssc0000135.1_g000038 |
| rosa_roxburghii | Rroxscaffold_4G00297140 Rroxscaffold_5G00348520 |
| rosa_rugosa | Rorug01G0269200 |
| rosa_samantha | Rh1AG283200 Rh1BG249400 Rh1CG267300 Rh1DG278300 Rh2AG248100 |
| rosa_wichuraiana | Rw1G025140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 941 |
| AccB1I | GGYRCC | 1 cut(s) | 1249 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 479 |
| AccI | GTMKAC | 1 cut(s) | 933 |
| AccII | CGCG | 1 cut(s) | 912 |
| AciI | CCGC | 6 cut(s) | 119, 705, 741, 790, 1040, 1385 |
| AclWI | GGATC | 2 cut(s) | 801, 1018 |
| AcoI | YGGCCR | 1 cut(s) | 963 |
| AcuI | CTGAAG | 1 cut(s) | 774 |
| AfaI | GTAC | 5 cut(s) | 505, 750, 762, 899, 958 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 289, 479 |
| AflII | CTTAAG | 1 cut(s) | 65 |
| AgsI | TTSAA | 2 cut(s) | 341, 488 |
| AjnI | CCWGG | 3 cut(s) | 568, 601, 1549 |
| AluBI | AGCT | 7 cut(s) | 77, 248, 287, 437, 653, 1003, 1505 |
| AluI | AGCT | 7 cut(s) | 77, 248, 287, 437, 653, 1003, 1505 |
| Alw26I | GTCTC | 8 cut(s) | 189, 218, 502, 715, 827, 1308, 1431, 1541 |
| AlwI | GGATC | 2 cut(s) | 801, 1018 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 305, 752, 1331 |
| Ama87I | CYCGRG | 1 cut(s) | 1119 |
| AoxI | GGCC | 2 cut(s) | 291, 963 |
| ApeKI | GCWGC | 1 cut(s) | 437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1266 |
| AspLEI | GCGC | 2 cut(s) | 400, 1354 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AsuC2I | CCSGG | 2 cut(s) | 371, 1210 |
| AsuHPI | GGTGA | 1 cut(s) | 1010 |
| AvaI | CYCGRG | 1 cut(s) | 1119 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| AxyI | CCTNAGG | 1 cut(s) | 714 |
| BanI | GGYRCC | 1 cut(s) | 1249 |
| BauI | CACGAG | 1 cut(s) | 797 |
| BbsI | GAAGAC | 1 cut(s) | 943 |
| BbvI | GCAGC | 1 cut(s) | 424 |
| BccI | CCATC | 5 cut(s) | 340, 481, 1301, 1321, 1525 |
| BceAI | ACGGC | 1 cut(s) | 978 |
| BciT130I | CCWGG | 3 cut(s) | 570, 603, 1551 |
| BciVI | GTATCC | 1 cut(s) | 212 |
| BclI | TGATCA | 2 cut(s) | 169, 655 |
| BcnI | CCSGG | 2 cut(s) | 371, 1210 |
| BcoDI | GTCTC | 8 cut(s) | 189, 218, 502, 715, 827, 1308, 1431, 1541 |
| BfaI | CTAG | 3 cut(s) | 284, 417, 1032 |
| BfmI | CTRYAG | 3 cut(s) | 315, 441, 828 |
| BfoI | RGCGCY | 1 cut(s) | 1355 |
| BfrI | CTTAAG | 1 cut(s) | 65 |
| BfuI | GTATCC | 1 cut(s) | 212 |
| BisI | GCNGC | 2 cut(s) | 438, 1386 |
| BlsI | GCNGC | 2 cut(s) | 439, 1387 |
| Bme1390I | CCNGG | 5 cut(s) | 371, 570, 603, 1210, 1551 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmeT110I | CYCGRG | 1 cut(s) | 1119 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BmiI | GGNNCC | 1 cut(s) | 1251 |
| BmrFI | CCNGG | 5 cut(s) | 371, 570, 603, 1210, 1551 |
| BmrI | ACTGGG | 1 cut(s) | 315 |
| BmsI | GCATC | 3 cut(s) | 202, 847, 878 |
| BmuI | ACTGGG | 1 cut(s) | 315 |
| BpiI | GAAGAC | 1 cut(s) | 943 |
| BpmI | CTGGAG | 1 cut(s) | 1485 |
| Bpu10I | CCTNAGC | 1 cut(s) | 288 |
| BpuMI | CCSGG | 2 cut(s) | 371, 1210 |
| BsaBI | GATNNNNATC | 1 cut(s) | 174 |
| BsaI | GGTCTC | 1 cut(s) | 1541 |
| BsaJI | CCNNGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1288, 1318 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 289, 479 |
| Bse1I | ACTGG | 2 cut(s) | 310, 879 |
| Bse21I | CCTNAGG | 1 cut(s) | 714 |
| Bse8I | GATNNNNATC | 1 cut(s) | 174 |
| BseBI | CCWGG | 3 cut(s) | 570, 603, 1551 |
| BseDI | CCNNGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| BseGI | GGATG | 3 cut(s) | 217, 283, 469 |
| BseJI | GATNNNNATC | 1 cut(s) | 174 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 289, 479 |
| BseNI | ACTGG | 2 cut(s) | 310, 879 |
| BseRI | GAGGAG | 3 cut(s) | 348, 1137, 1296 |
| BseXI | GCAGC | 1 cut(s) | 424 |
| Bsh1236I | CGCG | 1 cut(s) | 912 |
| BshFI | GGCC | 2 cut(s) | 293, 965 |
| BshNI | GGYRCC | 1 cut(s) | 1249 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1119 |
| BsiSI | CCGG | 2 cut(s) | 371, 1209 |
| BslFI | GGGAC | 1 cut(s) | 1500 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 289, 479 |
| BsmAI | GTCTC | 8 cut(s) | 189, 218, 502, 715, 827, 1308, 1431, 1541 |
| BsmBI | CGTCTC | 1 cut(s) | 827 |
| BsmFI | GGGAC | 1 cut(s) | 1500 |
| BsmI | GAATGC | 1 cut(s) | 139 |
| BsnI | GGCC | 2 cut(s) | 293, 965 |
| Bso31I | GGTCTC | 1 cut(s) | 1541 |
| BsoBI | CYCGRG | 1 cut(s) | 1119 |
| Bsp1407I | TGTACA | 2 cut(s) | 897, 956 |
| Bsp143I | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| Bsp19I | CCATGG | 2 cut(s) | 966, 1253 |
| Bsp68I | TCGCGA | 1 cut(s) | 912 |
| BspACI | CCGC | 6 cut(s) | 119, 705, 741, 790, 1040, 1385 |
| BspANI | GGCC | 2 cut(s) | 293, 965 |
| BspFNI | CGCG | 1 cut(s) | 912 |
| BspHI | TCATGA | 1 cut(s) | 817 |
| BspLI | GGNNCC | 1 cut(s) | 1251 |
| BspPI | GGATC | 2 cut(s) | 801, 1018 |
| BspT107I | GGYRCC | 1 cut(s) | 1249 |
| BspTI | CTTAAG | 1 cut(s) | 65 |
| BspTNI | GGTCTC | 1 cut(s) | 1541 |
| BsrGI | TGTACA | 2 cut(s) | 897, 956 |
| BsrI | ACTGG | 2 cut(s) | 310, 879 |
| BssECI | CCNNGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| BssMI | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| BssSI | CACGAG | 1 cut(s) | 797 |
| BssT1I | CCWWGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| Bst2BI | CACGAG | 1 cut(s) | 797 |
| Bst2UI | CCWGG | 3 cut(s) | 570, 603, 1551 |
| Bst4CI | ACNGT | 4 cut(s) | 235, 316, 748, 1333 |
| Bst6I | CTCTTC | 4 cut(s) | 36, 750, 897, 1429 |
| BstAFI | CTTAAG | 1 cut(s) | 65 |
| BstAUI | TGTACA | 2 cut(s) | 897, 956 |
| BstDEI | CTNAG | 7 cut(s) | 23, 156, 288, 714, 785, 1299, 1556 |
| BstDSI | CCRYGG | 2 cut(s) | 966, 1253 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 287 |
| BstF5I | GGATG | 3 cut(s) | 217, 283, 469 |
| BstFNI | CGCG | 1 cut(s) | 912 |
| BstH2I | RGCGCY | 1 cut(s) | 1355 |
| BstHHI | GCGC | 2 cut(s) | 400, 1354 |
| BstKTI | GATC | 5 cut(s) | 172, 658, 796, 991, 1026 |
| BstMAI | GTCTC | 8 cut(s) | 189, 218, 502, 715, 827, 1308, 1431, 1541 |
| BstMBI | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 83, 434, 446, 771, 1351, 1394 |
| BstNI | CCWGG | 3 cut(s) | 570, 603, 1551 |
| BstSCI | CCNGG | 5 cut(s) | 369, 568, 601, 1208, 1549 |
| BstSFI | CTRYAG | 3 cut(s) | 315, 441, 828 |
| BstUI | CGCG | 1 cut(s) | 912 |
| BstV1I | GCAGC | 1 cut(s) | 424 |
| BstV2I | GAAGAC | 1 cut(s) | 943 |
| BstX2I | RGATCY | 1 cut(s) | 1023 |
| BstYI | RGATCY | 1 cut(s) | 1023 |
| Bsu36I | CCTNAGG | 1 cut(s) | 714 |
| BsuI | GTATCC | 1 cut(s) | 212 |
| BsuRI | GGCC | 2 cut(s) | 293, 965 |
| BtgI | CCRYGG | 2 cut(s) | 966, 1253 |
| BtsCI | GGATG | 3 cut(s) | 217, 283, 469 |
| BtsIMutI | CAGTG | 1 cut(s) | 872 |
| BtuMI | TCGCGA | 1 cut(s) | 912 |
| CaiI | CAGNNNCTG | 3 cut(s) | 305, 752, 1331 |
| CciI | TCATGA | 1 cut(s) | 817 |
| CfoI | GCGC | 2 cut(s) | 400, 1354 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| CseI | GACGC | 1 cut(s) | 844 |
| Csp6I | GTAC | 5 cut(s) | 504, 749, 761, 898, 957 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 963, 998 |
| CviAII | CATG | 5 cut(s) | 818, 862, 967, 1254, 1361 |
| CviQI | GTAC | 5 cut(s) | 504, 749, 761, 898, 957 |
| DdeI | CTNAG | 7 cut(s) | 23, 156, 288, 714, 785, 1299, 1556 |
| DpnI | GATC | 5 cut(s) | 171, 657, 795, 990, 1025 |
| DpnII | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 941 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 941 |
| EaeI | YGGCCR | 1 cut(s) | 963 |
| Eam1104I | CTCTTC | 4 cut(s) | 36, 750, 897, 1429 |
| EarI | CTCTTC | 4 cut(s) | 36, 750, 897, 1429 |
| EciI | GGCGGA | 1 cut(s) | 730 |
| Eco130I | CCWWGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| Eco31I | GGTCTC | 1 cut(s) | 1541 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| Eco57I | CTGAAG | 1 cut(s) | 774 |
| Eco81I | CCTNAGG | 1 cut(s) | 714 |
| Eco88I | CYCGRG | 1 cut(s) | 1119 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 287 |
| EcoRII | CCWGG | 3 cut(s) | 568, 601, 1549 |
| EcoT14I | CCWWGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| ErhI | CCWWGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| Esp3I | CGTCTC | 1 cut(s) | 827 |
| FaeI | CATG | 5 cut(s) | 821, 865, 970, 1257, 1364 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1434, 1466 |
| FaqI | GGGAC | 1 cut(s) | 1500 |
| FatI | CATG | 5 cut(s) | 817, 861, 966, 1253, 1360 |
| FauI | CCCGC | 1 cut(s) | 783 |
| FbaI | TGATCA | 2 cut(s) | 169, 655 |
| FblI | GTMKAC | 1 cut(s) | 933 |
| Fnu4HI | GCNGC | 2 cut(s) | 438, 1386 |
| FokI | GGATG | 3 cut(s) | 224, 290, 456 |
| Fsp4HI | GCNGC | 2 cut(s) | 438, 1386 |
| FspBI | CTAG | 3 cut(s) | 284, 417, 1032 |
| GlaI | GCGC | 2 cut(s) | 399, 1353 |
| GluI | GCNGC | 2 cut(s) | 438, 1386 |
| GsuI | CTGGAG | 1 cut(s) | 1485 |
| HaeII | RGCGCY | 1 cut(s) | 1355 |
| HaeIII | GGCC | 2 cut(s) | 293, 965 |
| HapII | CCGG | 2 cut(s) | 371, 1209 |
| HgaI | GACGC | 1 cut(s) | 844 |
| HhaI | GCGC | 2 cut(s) | 400, 1354 |
| Hin1II | CATG | 5 cut(s) | 821, 865, 970, 1257, 1364 |
| Hin6I | GCGC | 2 cut(s) | 398, 1352 |
| HinP1I | GCGC | 2 cut(s) | 398, 1352 |
| HinfI | GANTC | 2 cut(s) | 143, 1093 |
| HpaII | CCGG | 2 cut(s) | 371, 1209 |
| HphI | GGTGA | 1 cut(s) | 1010 |
| Hpy166II | GTNNAC | 2 cut(s) | 900, 934 |
| Hpy188I | TCNGA | 3 cut(s) | 851, 1076, 1108 |
| Hpy188III | TCNNGA | 7 cut(s) | 242, 592, 797, 818, 911, 1032, 1366 |
| Hpy8I | GTNNAC | 2 cut(s) | 900, 934 |
| HpyAV | CCTTC | 4 cut(s) | 567, 815, 1220, 1226 |
| HpyCH4III | ACNGT | 4 cut(s) | 235, 316, 748, 1333 |
| HpyCH4IV | ACGT | 2 cut(s) | 930, 1014 |
| HpyCH4V | TGCA | 6 cut(s) | 137, 535, 611, 859, 869, 1345 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 83, 434, 446, 771, 1351, 1394 |
| HpyF3I | CTNAG | 7 cut(s) | 23, 156, 288, 714, 785, 1299, 1556 |
| HpySE526I | ACGT | 2 cut(s) | 930, 1014 |
| Hsp92II | CATG | 5 cut(s) | 821, 865, 970, 1257, 1364 |
| HspAI | GCGC | 2 cut(s) | 398, 1352 |
| Ksp22I | TGATCA | 2 cut(s) | 169, 655 |
| Kzo9I | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| Lsp1109I | GCAGC | 1 cut(s) | 424 |
| LweI | GCATC | 3 cut(s) | 202, 847, 878 |
| MaeI | CTAG | 3 cut(s) | 284, 417, 1032 |
| MaeII | ACGT | 2 cut(s) | 930, 1014 |
| MaeIII | GTNAC | 6 cut(s) | 926, 970, 1046, 1099, 1141, 1406 |
| MalI | GATC | 5 cut(s) | 171, 657, 795, 990, 1025 |
| MboI | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| MboII | GAAGA | 9 cut(s) | 41, 53, 82, 767, 884, 899, 943, 1435, 1446 |
| MfeI | CAATTG | 2 cut(s) | 336, 808 |
| MflI | RGATCY | 1 cut(s) | 1023 |
| MluCI | AATT | 5 cut(s) | 261, 336, 699, 808, 977 |
| MmeI | TCCRAC | 1 cut(s) | 1141 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1266 |
| MseI | TTAA | 4 cut(s) | 66, 620, 1010, 1281 |
| MspA1I | CMGCKG | 1 cut(s) | 707 |
| MspCI | CTTAAG | 1 cut(s) | 65 |
| MspI | CCGG | 2 cut(s) | 371, 1209 |
| MspR9I | CCNGG | 5 cut(s) | 371, 570, 603, 1210, 1551 |
| MunI | CAATTG | 2 cut(s) | 336, 808 |
| Mva1269I | GAATGC | 1 cut(s) | 139 |
| MvaI | CCWGG | 3 cut(s) | 570, 603, 1551 |
| MvnI | CGCG | 1 cut(s) | 912 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 83, 434, 446, 771, 1351, 1394 |
| NciI | CCSGG | 2 cut(s) | 371, 1210 |
| NcoI | CCATGG | 2 cut(s) | 966, 1253 |
| NdeII | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| NlaIII | CATG | 5 cut(s) | 821, 865, 970, 1257, 1364 |
| NlaIV | GGNNCC | 1 cut(s) | 1251 |
| NmuCI | GTSAC | 1 cut(s) | 1141 |
| NruI | TCGCGA | 1 cut(s) | 912 |
| PaeR7I | CTCGAG | 1 cut(s) | 1119 |
| PagI | TCATGA | 1 cut(s) | 817 |
| PctI | GAATGC | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1266 |
| PfeI | GAWTC | 2 cut(s) | 143, 1093 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 479 |
| PkrI | GCNGC | 2 cut(s) | 439, 1387 |
| Psp6I | CCWGG | 3 cut(s) | 568, 601, 1549 |
| PspGI | CCWGG | 3 cut(s) | 568, 601, 1549 |
| PspN4I | GGNNCC | 1 cut(s) | 1251 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| PspXI | VCTCGAGB | 1 cut(s) | 1119 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1173, 1205 |
| PstNI | CAGNNNCTG | 3 cut(s) | 305, 752, 1331 |
| PsuI | RGATCY | 1 cut(s) | 1023 |
| RruI | TCGCGA | 1 cut(s) | 912 |
| RsaI | GTAC | 5 cut(s) | 505, 750, 762, 899, 958 |
| RsaNI | GTAC | 5 cut(s) | 504, 749, 761, 898, 957 |
| SaqAI | TTAA | 4 cut(s) | 66, 620, 1010, 1281 |
| SatI | GCNGC | 2 cut(s) | 438, 1386 |
| Sau3AI | GATC | 5 cut(s) | 169, 655, 793, 988, 1023 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| ScrFI | CCNGG | 5 cut(s) | 371, 570, 603, 1210, 1551 |
| SfaNI | GCATC | 3 cut(s) | 202, 847, 878 |
| SfcI | CTRYAG | 3 cut(s) | 315, 441, 828 |
| Sfr274I | CTCGAG | 1 cut(s) | 1119 |
| SinI | GGWCC | 1 cut(s) | 46 |
| SlaI | CTCGAG | 1 cut(s) | 1119 |
| SmlI | CTYRAG | 2 cut(s) | 65, 1119 |
| SmoI | CTYRAG | 2 cut(s) | 65, 1119 |
| Sse9I | AATT | 5 cut(s) | 261, 336, 699, 808, 977 |
| SsiI | CCGC | 6 cut(s) | 119, 705, 741, 790, 1040, 1385 |
| SspMI | CTAG | 3 cut(s) | 284, 417, 1032 |
| StyD4I | CCNGG | 5 cut(s) | 369, 568, 601, 1208, 1549 |
| StyI | CCWWGG | 4 cut(s) | 966, 1083, 1253, 1522 |
| TaaI | ACNGT | 4 cut(s) | 235, 316, 748, 1333 |
| TaiI | ACGT | 2 cut(s) | 933, 1017 |
| TaqI | TCGA | 3 cut(s) | 591, 1120, 1365 |
| TasI | AATT | 5 cut(s) | 261, 336, 699, 808, 977 |
| TatI | WGTACW | 2 cut(s) | 897, 956 |
| TauI | GCSGC | 1 cut(s) | 1388 |
| TfiI | GAWTC | 2 cut(s) | 143, 1093 |
| Tru1I | TTAA | 4 cut(s) | 66, 620, 1010, 1281 |
| Tru9I | TTAA | 4 cut(s) | 66, 620, 1010, 1281 |
| TscAI | CASTG | 1 cut(s) | 879 |
| TseFI | GTSAC | 1 cut(s) | 1141 |
| TseI | GCWGC | 1 cut(s) | 437 |
| Tsp45I | GTSAC | 1 cut(s) | 1141 |
| TspDTI | ATGAA | 3 cut(s) | 663, 806, 834 |
| TspRI | CASTG | 1 cut(s) | 879 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 479 |
| Vha464I | CTTAAG | 1 cut(s) | 65 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 287 |
| XbaI | TCTAGA | 1 cut(s) | 1031 |
| XhoI | CTCGAG | 1 cut(s) | 1119 |
| XmiI | GTMKAC | 1 cut(s) | 933 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1266 |
| XspI | CTAG | 3 cut(s) | 284, 417, 1032 |