ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63630 AT5G63630 |
| fragaria_vesca | FvH4_7g16280 |
| malus_domestica | MD01G1079300.v1.1 MD07G1148200.v1.1 |
| prunus_persica | Prupe.2G186500_v2.0.a1 |
| pyrus_communis | pycom01g10760 pycom07g14720 |
| rosa_chinensis | RchiOBHm_Chr1g0359291 |
| rosa_laevigata | RLG00000027883 |
| rosa_multiflora | Rmu_co8196408.1_g000001 Rmu_ssc0000135.1_g000038 |
| rosa_roxburghii | Rroxscaffold_4G00297140 Rroxscaffold_5G00348520 |
| rosa_rugosa | Rorug01G0269200 |
| rosa_samantha | Rh1AG283200 Rh1BG249400 Rh1CG267300 Rh1DG278300 Rh2AG248100 |
| rosa_wichuraiana | Rw1G025140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 220, 237 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AflIII | ACRYGT | 1 cut(s) | 49 |
| AluBI | AGCT | 1 cut(s) | 387 |
| AluI | AGCT | 1 cut(s) | 387 |
| Alw21I | GWGCWC | 1 cut(s) | 389 |
| Alw26I | GTCTC | 1 cut(s) | 37 |
| ApeKI | GCWGC | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 4 cut(s) | 113, 176, 266, 416 |
| BanII | GRGCYC | 1 cut(s) | 389 |
| BbsI | GAAGAC | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 1 cut(s) | 389 |
| BbvI | GCAGC | 1 cut(s) | 18 |
| BcoDI | GTCTC | 1 cut(s) | 37 |
| BglII | AGATCT | 1 cut(s) | 281 |
| BisI | GCNGC | 1 cut(s) | 7 |
| BlsI | GCNGC | 1 cut(s) | 8 |
| BmiI | GGNNCC | 1 cut(s) | 204 |
| BpiI | GAAGAC | 1 cut(s) | 68 |
| BsaBI | GATNNNNATC | 1 cut(s) | 280 |
| BsaJI | CCNNGG | 2 cut(s) | 19, 124 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bse1I | ACTGG | 1 cut(s) | 397 |
| Bse8I | GATNNNNATC | 1 cut(s) | 280 |
| BseDI | CCNNGG | 2 cut(s) | 19, 124 |
| BseGI | GGATG | 2 cut(s) | 321, 334 |
| BseJI | GATNNNNATC | 1 cut(s) | 280 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseNI | ACTGG | 1 cut(s) | 397 |
| BseXI | GCAGC | 1 cut(s) | 18 |
| BsiHKAI | GWGCWC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BsmAI | GTCTC | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 1 cut(s) | 389 |
| Bsp143I | GATC | 1 cut(s) | 281 |
| BspACI | CCGC | 2 cut(s) | 220, 237 |
| BspLI | GGNNCC | 1 cut(s) | 204 |
| BsrI | ACTGG | 1 cut(s) | 397 |
| BssECI | CCNNGG | 2 cut(s) | 19, 124 |
| BssMI | GATC | 1 cut(s) | 281 |
| BssT1I | CCWWGG | 1 cut(s) | 19 |
| Bst4CI | ACNGT | 1 cut(s) | 158 |
| Bst6I | CTCTTC | 2 cut(s) | 101, 107 |
| BstDSI | CCRYGG | 1 cut(s) | 124 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 18 |
| BstF5I | GGATG | 2 cut(s) | 321, 334 |
| BstKTI | GATC | 1 cut(s) | 284 |
| BstMAI | GTCTC | 1 cut(s) | 37 |
| BstMBI | GATC | 1 cut(s) | 281 |
| BstNSI | RCATGY | 1 cut(s) | 53 |
| BstV1I | GCAGC | 1 cut(s) | 18 |
| BstV2I | GAAGAC | 1 cut(s) | 68 |
| BstX2I | RGATCY | 1 cut(s) | 281 |
| BstYI | RGATCY | 1 cut(s) | 281 |
| BtgI | CCRYGG | 1 cut(s) | 124 |
| BtsCI | GGATG | 2 cut(s) | 321, 334 |
| CviAII | CATG | 4 cut(s) | 50, 109, 226, 312 |
| CviJI | RGCY | 3 cut(s) | 9, 205, 387 |
| CviKI_1 | RGCY | 3 cut(s) | 9, 205, 387 |
| DpnI | GATC | 1 cut(s) | 283 |
| DpnII | GATC | 1 cut(s) | 281 |
| Eam1104I | CTCTTC | 2 cut(s) | 101, 107 |
| EarI | CTCTTC | 2 cut(s) | 101, 107 |
| Ecl136II | GAGCTC | 1 cut(s) | 387 |
| Eco130I | CCWWGG | 1 cut(s) | 19 |
| Eco24I | GRGCYC | 1 cut(s) | 389 |
| Eco53kI | GAGCTC | 1 cut(s) | 387 |
| EcoICRI | GAGCTC | 1 cut(s) | 387 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 19 |
| EcoT38I | GRGCYC | 1 cut(s) | 389 |
| ErhI | CCWWGG | 1 cut(s) | 19 |
| FaeI | CATG | 4 cut(s) | 53, 112, 229, 315 |
| FaiI | YATR | 5 cut(s) | 51, 110, 208, 227, 313 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 280, 312 |
| FatI | CATG | 4 cut(s) | 49, 108, 225, 311 |
| Fnu4HI | GCNGC | 1 cut(s) | 7 |
| FokI | GGATG | 2 cut(s) | 328, 341 |
| FriOI | GRGCYC | 1 cut(s) | 389 |
| Fsp4HI | GCNGC | 1 cut(s) | 7 |
| GluI | GCNGC | 1 cut(s) | 7 |
| Hin1II | CATG | 4 cut(s) | 53, 112, 229, 315 |
| HinfI | GANTC | 3 cut(s) | 149, 257, 407 |
| HphI | GGTGA | 4 cut(s) | 113, 176, 266, 416 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 2 cut(s) | 261, 374 |
| HpyAV | CCTTC | 3 cut(s) | 20, 97, 338 |
| HpyCH4III | ACNGT | 1 cut(s) | 158 |
| HpyCH4IV | ACGT | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 1 cut(s) | 215 |
| HpySE526I | ACGT | 1 cut(s) | 130 |
| Hsp92II | CATG | 4 cut(s) | 53, 112, 229, 315 |
| Kzo9I | GATC | 1 cut(s) | 281 |
| LmnI | GCTCC | 3 cut(s) | 202, 222, 392 |
| LpnPI | CCDG | 4 cut(s) | 225, 254, 287, 410 |
| Lsp1109I | GCAGC | 1 cut(s) | 18 |
| MaeII | ACGT | 1 cut(s) | 130 |
| MalI | GATC | 1 cut(s) | 283 |
| MboI | GATC | 1 cut(s) | 281 |
| MboII | GAAGA | 4 cut(s) | 68, 82, 88, 94 |
| MflI | RGATCY | 1 cut(s) | 281 |
| MhlI | GDGCHC | 1 cut(s) | 389 |
| MlyI | GAGTC | 2 cut(s) | 266, 416 |
| MnlI | CCTC | 4 cut(s) | 104, 110, 164, 266 |
| NdeII | GATC | 1 cut(s) | 281 |
| NlaIII | CATG | 4 cut(s) | 53, 112, 229, 315 |
| NlaIV | GGNNCC | 1 cut(s) | 204 |
| NspI | RCATGY | 1 cut(s) | 53 |
| PciI | ACATGT | 1 cut(s) | 49 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PkrI | GCNGC | 1 cut(s) | 8 |
| PleI | GAGTC | 2 cut(s) | 265, 415 |
| PpsI | GAGTC | 2 cut(s) | 265, 415 |
| PscI | ACATGT | 1 cut(s) | 49 |
| Psp124BI | GAGCTC | 1 cut(s) | 389 |
| PspN4I | GGNNCC | 1 cut(s) | 204 |
| PsuI | RGATCY | 1 cut(s) | 281 |
| SacI | GAGCTC | 1 cut(s) | 389 |
| SatI | GCNGC | 1 cut(s) | 7 |
| Sau3AI | GATC | 1 cut(s) | 281 |
| SchI | GAGTC | 2 cut(s) | 266, 416 |
| SduI | GDGCHC | 1 cut(s) | 389 |
| SetI | ASST | 5 cut(s) | 133, 175, 349, 353, 389 |
| SsiI | CCGC | 2 cut(s) | 220, 237 |
| SstI | GAGCTC | 1 cut(s) | 389 |
| StyI | CCWWGG | 1 cut(s) | 19 |
| TaaI | ACNGT | 1 cut(s) | 158 |
| TaiI | ACGT | 1 cut(s) | 133 |
| TaqI | TCGA | 2 cut(s) | 45, 383 |
| TaqII | GACCGA | 1 cut(s) | 282 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| TseI | GCWGC | 1 cut(s) | 6 |
| TspDTI | ATGAA | 2 cut(s) | 162, 300 |
| TspGWI | ACGGA | 1 cut(s) | 141 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 18 |
| XceI | RCATGY | 1 cut(s) | 53 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 131 |