Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010499

Physical Location & Seq

Genomic Coordinates Reverse (-)

13977801 .. 13982647

Gene Structure 4847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g16280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGAAAACGACGTCGCTTTCGTCCATGCCCGTTAAGCTCCTCCCACAACTCCGCCTCCTCAACAACCCCTCCTCCTCCTCTCTCCCAATCTCCCGCTTCCTCTCCATGAAATTCGGACCCTCCATTTCGGCCTCGCCCCGACCCGTACCCGCCTTCTCCCGCGCCTTCCCGCTCCGCCTCCGCTACCTCGCCCTCGGCTCCCACCGCTCATTATCCACCCGCGCCTTCCGAACCGGGTCGGGTTCTTCCGGGTCGGGCTCCCAATTCGCCCGCGGATACGAGCGGAAGGCGGTCGGTGGATCCAAGAGCCTTGTCGACGACGAGGCCGAGCTGAGCGACTGGGTCAGCGAGCTGCGGACCGACCCGACCCGAAGGGGAGAGGATTCTGACGGCGGTGGGAGGAGAGGTAGGGTTAGAGATAGGGGAGGGGAGAGAGATAGAGAGCCGTATCCGGCGAAGCGGAGCAGGAGAGATAGCGGCGGCGGCTCCGACGAGTTCGGCGGAGGGTTTCGGTCTCCGGCTCAGTCTTCACGGATGAGTAGCAGAAGGGAGGATGGTGGTGATAGAGGAGGTAGGTCATTTCCGGCGAGAGGTAGTCGCGGTGGGAGTTCGAGCTTCGGTGATCGGAGACCGAGCTCCGGTCCGTCGGCGTTTACTAAAAATCCTAGGATGGATAGAAGGTTTGATAACAAGTTTGGGGATAATGCTGTGAAGGAGGATGAGTTTTCGGGGAGGAGGAGTCAGAGTTTCAGAGGGAGTTCGAGTAATGTGGCTAAGAGAGGTGGGAGAGAGGTGGATGCGGGTTTCAGAAGAGGCGGAGGTGAGTGGGTGAGGAAGGATTCGATTAAGGAAAGGCCGGTGGTTGATGATAGTGATGATGAGGATGATGAGGTGGAGGAGCTTGGTGCTGGTATTGGGGGGTTGCTTACCGAGGAAGATAGTGATGGTGCTGCTTCGGAGGTGGAGGATGGGTATGAAGTGTTGAAAGGTAAGAGTGCTGCGGCATTGTTTGGTTCGGATAAGGTAGCGGTGAGCCAGAAGGCTGTGCCGAAAAGTTCAGCTGGAGACTCTGACTCGTATTTGAGTGAGTCAAGGTTTGATCAGTGTTCGGTCTCACCACTGTCCTTGAAGGGAATAAAGGATGCGGGATATGTGAACATGACTGTGGTACAAGAGGCTACTCTTCCCGTCATACTCAAAGGCAAGGATGTTCTAGCCAAAGCCAAAACCGGGACTGGAAAAACTGTTGCGTTCTTGCTTCCATCAATTGAAGTTGTTGTAAATTCACCTCCTATTGGTCGTGACCATAAGAGACCCCCAATTTCTGTACTTGTAATATGCCCAACTCGAGAGCTGGCGAATCAAGCTGCAGTAGAAGCCGGTAAATTGTTGAAGTATCATCCTTCTATTGGTGTTCAAGTTGTGATTGGAGGTACAAGACTTGCTCTAGAACAGAAACGCATGCAAGCAAACCCTTGCCAGATTCTTGTCGCTACACCGGGAAGGCTCAAAGATCACATTGAGAATACCGCGGGTTTCGCAACTAGGCTGATGGGTGTCAAGGTCCTCGTACTTGATGAAGCTGACCATTTACTTGATATGGGGTTCCGTAAAGACATAGAAAGGATTATAGCTGCTGTTCCAAAACAGCGACAGACACTATTGTTCTCTGCCACAGTTCCAGAAGAGGTCCGTCAAATTTGTCATATTGCTTTGAAAAGAGATCATGAATATATAAACACGGTTGTGGAAGGCAGTGAAGAGACACATGCACAGGTTAGACAAACCCATTTGATTGCTCCTTTGGACAAGCACTTCTCCTTTGTATATAGTCTTCTTAAAGAGCATATCGCAGACGATCTTGACTATAAGGTTCTTGTATTCTGCACTACTGCAATGGTCACCCGACTGGTCGCTGACCTTCTTGGTGAGCTGAACTTGAACGTTAGGGAGATCCACTCCAGAAAGCCACAGAGTTATAGAACTAGGGTTTCTGATGAATTTCGGAAATCAAAGGGTCTTATCCTGGTGACTTCTGATGTATCTGCACGTGGGGTTGATTATCCAGATGTTACTCTAGTCATACAGGTTGGCATTCCAGCTGATAGACAACAGTATATTCATCGACTTGGTAGAACTGGCCGTAAGGGCAAAGAAGGGCAAGGAATATTGCTACTGGCGCCTTGGGAGGAATTCTTCTTATCCGCTATTAAAGATTTGCCAATGACCAAGGCTCCTGTACCTTTAGTTGATCCCGATACGACGAAGAAGGTGGAACGAGCTCTATCCCAAGTGGAGATAAAGAACAAAGAAGCAGCATACCAAGCGTGGCTTGGGTATTACAACTCAAATAAGAAAATAGGGCGTGATAAGCATAGGCTTGTGGAGCTTGCTAATGAGTTTAGCCGAAGCATGGGGCTGGACAACCCTCCAGCCATTGCCAAGATGGTTCTCGGTAAGATGGGTCTTAAGAATGTCCCTGGACTGCGTTCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

833

Amino Acids

91.0

Weight (kDa)

9.56

Isoelectric Point (pI)

50.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	389 - 566	6e-45	DEAD/DEAH box helicase
ResIII	PF04851	401 - 561	1.8e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	612 - 717	8e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010499)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63630 AT5G63630
fragaria_vesca	FvH4_7g16280
malus_domestica	MD01G1079300.v1.1 MD07G1148200.v1.1
prunus_persica	Prupe.2G186500_v2.0.a1
pyrus_communis	pycom01g10760 pycom07g14720
rosa_chinensis	RchiOBHm_Chr1g0359291
rosa_laevigata	RLG00000027883
rosa_multiflora	Rmu_co8196408.1_g000001 Rmu_ssc0000135.1_g000038
rosa_roxburghii	Rroxscaffold_4G00297140 Rroxscaffold_5G00348520
rosa_rugosa	Rorug01G0269200
rosa_samantha	Rh1AG283200 Rh1BG249400 Rh1CG267300 Rh1DG278300 Rh2AG248100
rosa_wichuraiana	Rw1G025140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	14
AccB1I	GGYRCC	1 cut(s)	2179
AccBSI	CCGCTC	3 cut(s)	172, 207, 283
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	5 cut(s)	162, 222, 273, 600, 1532
AclI	AACGTT	1 cut(s)	1944
AclWI	GGATC	4 cut(s)	294, 307, 1948, 2246
AcoI	YGGCCR	1 cut(s)	2140
AcsI	RAATTY	5 cut(s)	110, 1282, 1698, 2000, 2192
AcvI	CACGTG	1 cut(s)	2051
AcyI	GRCGYC	2 cut(s)	11, 2180
AfaI	GTAC	6 cut(s)	147, 1170, 1329, 1435, 1572, 2241
AfiI	CCNNNNNNNGG	6 cut(s)	590, 638, 1230, 1295, 1409, 2413
AflII	CTTAAG	1 cut(s)	2468
AgsI	TTSAA	7 cut(s)	985, 1129, 1271, 1393, 1418, 1717, 1942
AjnI	CCWGG	2 cut(s)	2025, 2479
AleI	CACNNNNGTG	1 cut(s)	1745
Alw21I	GWGCWC	2 cut(s)	638, 2284
Alw26I	GTCTC	6 cut(s)	519, 622, 1059, 1117, 1306, 1757
AlwI	GGATC	4 cut(s)	294, 307, 1948, 2246
Ama87I	CYCGRG	1 cut(s)	1347
AoxI	GGCC	4 cut(s)	129, 324, 854, 2140
ApeKI	GCWGC	6 cut(s)	352, 950, 998, 1367, 1634, 2315
ApoI	RAATTY	5 cut(s)	110, 1282, 1698, 2000, 2192
ArsI	GACNNNNNNTTYG	1 cut(s)	33
AspA2I	CCTAGG	1 cut(s)	665
AspLEI	GCGC	3 cut(s)	164, 224, 2182
AspS9I	GGNCC	5 cut(s)	116, 357, 641, 1564, 1690
AsuC2I	CCSGG	4 cut(s)	235, 250, 1231, 1500
AvaI	CYCGRG	1 cut(s)	1347
AvaII	GGWCC	5 cut(s)	116, 357, 641, 1564, 1690
AvrII	CCTAGG	1 cut(s)	665
BamHI	GGATCC	1 cut(s)	299
BanI	GGYRCC	1 cut(s)	2179
BanII	GRGCYC	3 cut(s)	260, 638, 2284
BarI	GAAGNNNNNNTAC	2 cut(s)	1818, 1850
BbrPI	CACGTG	1 cut(s)	2051
BbsI	GAAGAC	2 cut(s)	519, 1826
Bbv12I	GWGCWC	2 cut(s)	638, 2284
BbvI	GCAGC	6 cut(s)	339, 937, 985, 1354, 1621, 2327
BccI	CCATC	8 cut(s)	548, 664, 938, 962, 1270, 1546, 2440, 2455
BceAI	ACGGC	3 cut(s)	406, 430, 2127
BciT130I	CCWGG	2 cut(s)	2027, 2481
BciVI	GTATCC	2 cut(s)	269, 459
BclI	TGATCA	1 cut(s)	1099
BcnI	CCSGG	4 cut(s)	235, 250, 1231, 1500
BcoDI	GTCTC	6 cut(s)	519, 622, 1059, 1117, 1306, 1757
BfaI	CTAG	6 cut(s)	666, 1214, 1448, 1545, 1986, 2078
BfmI	CTRYAG	1 cut(s)	1368
BfoI	RGCGCY	1 cut(s)	2183
BfrI	CTTAAG	1 cut(s)	2468
BfuI	GTATCC	2 cut(s)	269, 459
BglI	GCCNNNNNGGC	1 cut(s)	2148
BlnI	CCTAGG	1 cut(s)	665
BlpI	GCTNAGC	1 cut(s)	332
Bme1390I	CCNGG	6 cut(s)	235, 250, 1231, 1500, 2027, 2481
Bme18I	GGWCC	5 cut(s)	116, 357, 641, 1564, 1690
BmeT110I	CYCGRG	1 cut(s)	1347
BmgT120I	GGNCC	5 cut(s)	116, 357, 641, 1564, 1690
BmiI	GGNNCC	8 cut(s)	118, 199, 259, 301, 487, 1607, 2181, 2235
BmrFI	CCNGG	6 cut(s)	235, 250, 1231, 1500, 2027, 2481
BmrI	ACTGGG	1 cut(s)	349
BmsI	GCATC	2 cut(s)	787, 1132
BmuI	ACTGGG	1 cut(s)	349
BpiI	GAAGAC	2 cut(s)	519, 1826
BplI	GAGNNNNNCTC	2 cut(s)	1943, 1975
BpmI	CTGGAG	3 cut(s)	1083, 1945, 2415
Bpu1102I	GCTNAGC	1 cut(s)	332
BpuMI	CCSGG	4 cut(s)	235, 250, 1231, 1500
BsaAI	YACGTR	1 cut(s)	2051
BsaHI	GRCGYC	2 cut(s)	11, 2180
BsaI	GGTCTC	4 cut(s)	519, 622, 1117, 1306
BsaJI	CCNNGG	8 cut(s)	193, 271, 665, 930, 1530, 2183, 2229, 2479
BsaWI	WCCGGW	1 cut(s)	638
Bsc4I	CCNNNNNNNGG	6 cut(s)	590, 638, 1230, 1295, 1409, 2413
Bse118I	RCCGGY	2 cut(s)	856, 1379
Bse1I	ACTGG	5 cut(s)	344, 1240, 1914, 2143, 2181
Bse3DI	GCAATG	2 cut(s)	1902, 2436
BseBI	CCWGG	2 cut(s)	2027, 2481
BseDI	CCNNGG	8 cut(s)	193, 271, 665, 930, 1530, 2183, 2229, 2479
BseLI	CCNNNNNNNGG	6 cut(s)	590, 638, 1230, 1295, 1409, 2413
BseMI	GCAATG	2 cut(s)	1902, 2436
BseMII	CTCAG	2 cut(s)	323, 536
BseNI	ACTGG	5 cut(s)	344, 1240, 1914, 2143, 2181
BseXI	GCAGC	6 cut(s)	339, 937, 985, 1354, 1621, 2327
BsgI	GTGCAG	2 cut(s)	1870, 2031
Bsh1236I	CGCG	5 cut(s)	162, 222, 273, 600, 1532
Bsh1285I	CGRYCG	1 cut(s)	294
BshFI	GGCC	4 cut(s)	131, 326, 856, 2142
BshNI	GGYRCC	1 cut(s)	2179
BsiEI	CGRYCG	1 cut(s)	294
BsiHKAI	GWGCWC	2 cut(s)	638, 2284
BsiHKCI	CYCGRG	1 cut(s)	1347
BslFI	GGGAC	2 cut(s)	1246, 2462
BslI	CCNNNNNNNGG	6 cut(s)	590, 638, 1230, 1295, 1409, 2413
BsmAI	GTCTC	6 cut(s)	519, 622, 1059, 1117, 1306, 1757
BsmFI	GGGAC	2 cut(s)	1246, 2462
BsmI	GAATGC	1 cut(s)	2094
BsnI	GGCC	4 cut(s)	131, 326, 856, 2142
Bso31I	GGTCTC	4 cut(s)	519, 622, 1117, 1306
BsoBI	CYCGRG	1 cut(s)	1347
Bsp1286I	GDGCHC	3 cut(s)	260, 638, 2284
Bsp143I	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
Bsp1720I	GCTNAGC	1 cut(s)	332
BspANI	GGCC	4 cut(s)	131, 326, 856, 2142
BspCNI	CTCAG	2 cut(s)	324, 535
BspFNI	CGCG	5 cut(s)	162, 222, 273, 600, 1532
BspHI	TCATGA	1 cut(s)	1726
BspLI	GGNNCC	8 cut(s)	118, 199, 259, 301, 487, 1607, 2181, 2235
BspMAI	CTGCAG	1 cut(s)	1372
BspPI	GGATC	4 cut(s)	294, 307, 1948, 2246
BspT107I	GGYRCC	1 cut(s)	2179
BspTI	CTTAAG	1 cut(s)	2468
BspTNI	GGTCTC	4 cut(s)	519, 622, 1117, 1306
BsrBI	CCGCTC	3 cut(s)	172, 207, 283
BsrDI	GCAATG	2 cut(s)	1902, 2436
BsrFI	RCCGGY	2 cut(s)	856, 1379
BsrI	ACTGG	5 cut(s)	344, 1240, 1914, 2143, 2181
BssAI	RCCGGY	2 cut(s)	856, 1379
BssECI	CCNNGG	8 cut(s)	193, 271, 665, 930, 1530, 2183, 2229, 2479
BssMI	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
BssNI	GRCGYC	2 cut(s)	11, 2180
BssT1I	CCWWGG	3 cut(s)	665, 2183, 2229
Bst2UI	CCWGG	2 cut(s)	2027, 2481
Bst4CI	ACNGT	6 cut(s)	1122, 1165, 1246, 1678, 1744, 2115
Bst6I	CTCTTC	4 cut(s)	805, 1188, 1680, 1755
BstACI	GRCGYC	2 cut(s)	11, 2180
BstAFI	CTTAAG	1 cut(s)	2468
BstBAI	YACGTR	1 cut(s)	2051
BstC8I	GCNNGC	6 cut(s)	271, 350, 1356, 1463, 1467, 2391
BstDEI	CTNAG	3 cut(s)	332, 522, 774
BstDSI	CCRYGG	2 cut(s)	271, 1530
BstEII	GGTNACC	1 cut(s)	1900
BstFNI	CGCG	5 cut(s)	162, 222, 273, 600, 1532
BstH2I	RGCGCY	1 cut(s)	2183
BstHHI	GCGC	3 cut(s)	164, 224, 2182
BstKTI	GATC	8 cut(s)	302, 625, 1102, 1516, 1726, 1861, 1956, 2254
BstMAI	GTCTC	6 cut(s)	519, 622, 1059, 1117, 1306, 1757
BstMBI	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
BstMCI	CGRYCG	1 cut(s)	294
BstNI	CCWGG	2 cut(s)	2027, 2481
BstNSI	RCATGY	2 cut(s)	1465, 1772
BstPI	GGTNACC	1 cut(s)	1900
BstSCI	CCNGG	6 cut(s)	233, 248, 1229, 1498, 2025, 2479
BstSFI	CTRYAG	1 cut(s)	1368
BstUI	CGCG	5 cut(s)	162, 222, 273, 600, 1532
BstV1I	GCAGC	6 cut(s)	339, 937, 985, 1354, 1621, 2327
BstV2I	GAAGAC	2 cut(s)	519, 1826
BstX2I	RGATCY	2 cut(s)	299, 1953
BstYI	RGATCY	2 cut(s)	299, 1953
BsuI	GTATCC	2 cut(s)	269, 459
BsuRI	GGCC	4 cut(s)	131, 326, 856, 2142
BtgI	CCRYGG	2 cut(s)	271, 1530
BtsI	GCAGTG	1 cut(s)	1762
BtsIMutI	CAGTG	3 cut(s)	1109, 1118, 1762
Cac8I	GCNNGC	6 cut(s)	271, 350, 1356, 1463, 1467, 2391
CciI	TCATGA	1 cut(s)	1726
CfoI	GCGC	3 cut(s)	164, 224, 2182
Cfr10I	RCCGGY	2 cut(s)	856, 1379
Cfr13I	GGNCC	5 cut(s)	116, 357, 641, 1564, 1690
Cfr42I	CCGCGG	2 cut(s)	274, 1533
CpoI	CGGWCCG	2 cut(s)	357, 641
Csp6I	GTAC	6 cut(s)	146, 1169, 1328, 1434, 1571, 2240
CspCI	CAANNNNNGTGG	2 cut(s)	1107, 1142
CspI	CGGWCCG	2 cut(s)	357, 641
CviAII	CATG	7 cut(s)	25, 106, 1159, 1462, 1727, 1769, 2413
CviQI	GTAC	6 cut(s)	146, 1169, 1328, 1434, 1571, 2240
DdeI	CTNAG	3 cut(s)	332, 522, 774
DinI	GGCGCC	1 cut(s)	2181
DpnI	GATC	8 cut(s)	301, 624, 1101, 1515, 1725, 1860, 1955, 2253
DpnII	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
EaeI	YGGCCR	1 cut(s)	2140
Eam1104I	CTCTTC	4 cut(s)	805, 1188, 1680, 1755
EarI	CTCTTC	4 cut(s)	805, 1188, 1680, 1755
EciI	GGCGGA	4 cut(s)	41, 164, 516, 831
Ecl136II	GAGCTC	2 cut(s)	636, 2282
Eco130I	CCWWGG	3 cut(s)	665, 2183, 2229
Eco24I	GRGCYC	3 cut(s)	260, 638, 2284
Eco31I	GGTCTC	4 cut(s)	519, 622, 1117, 1306
Eco47I	GGWCC	5 cut(s)	116, 357, 641, 1564, 1690
Eco53kI	GAGCTC	2 cut(s)	636, 2282
Eco72I	CACGTG	1 cut(s)	2051
Eco88I	CYCGRG	1 cut(s)	1347
Eco91I	GGTNACC	1 cut(s)	1900
EcoICRI	GAGCTC	2 cut(s)	636, 2282
EcoO109I	RGGNCCY	1 cut(s)	1564
EcoO65I	GGTNACC	1 cut(s)	1900
EcoRI	GAATTC	1 cut(s)	2192
EcoRII	CCWGG	2 cut(s)	2025, 2479
EcoT14I	CCWWGG	3 cut(s)	665, 2183, 2229
EcoT38I	GRGCYC	3 cut(s)	260, 638, 2284
EgeI	GGCGCC	1 cut(s)	2181
EheI	GGCGCC	1 cut(s)	2181
ErhI	CCWWGG	3 cut(s)	665, 2183, 2229
FaeI	CATG	7 cut(s)	28, 109, 1162, 1465, 1730, 1772, 2416
FalI	AAGNNNNNCTT	2 cut(s)	2316, 2348
FaqI	GGGAC	2 cut(s)	1246, 2462
FatI	CATG	7 cut(s)	24, 105, 1158, 1461, 1726, 1768, 2412
FauI	CCCGC	9 cut(s)	101, 157, 167, 177, 227, 278, 793, 1138, 1525
FbaI	TGATCA	1 cut(s)	1099
FblI	GTMKAC	1 cut(s)	315
FriOI	GRGCYC	3 cut(s)	260, 638, 2284
FspBI	CTAG	6 cut(s)	666, 1214, 1448, 1545, 1986, 2078
GlaI	GCGC	3 cut(s)	163, 223, 2181
GsuI	CTGGAG	3 cut(s)	1083, 1945, 2415
HaeII	RGCGCY	1 cut(s)	2183
HaeIII	GGCC	4 cut(s)	131, 326, 856, 2142
HhaI	GCGC	3 cut(s)	164, 224, 2182
Hin1I	GRCGYC	2 cut(s)	11, 2180
Hin1II	CATG	7 cut(s)	28, 109, 1162, 1465, 1730, 1772, 2416
Hin6I	GCGC	3 cut(s)	162, 222, 2180
HinP1I	GCGC	3 cut(s)	162, 222, 2180
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HinfI	GANTC	8 cut(s)	383, 739, 839, 1067, 1073, 1088, 1360, 1483
Hpy166II	GTNNAC	3 cut(s)	316, 654, 1156
Hpy188III	TCNNGA	9 cut(s)	1301, 1349, 1448, 1682, 1727, 1862, 1962, 2066, 2255
Hpy8I	GTNNAC	3 cut(s)	316, 654, 1156
Hpy99I	CGWCG	7 cut(s)	13, 16, 320, 323, 494, 649, 2266
HpyCH4III	ACNGT	6 cut(s)	1122, 1165, 1246, 1678, 1744, 2115
HpyCH4IV	ACGT	3 cut(s)	11, 1944, 2050
HpyCH4V	TGCA	6 cut(s)	1370, 1465, 1772, 1887, 1895, 2048
HpyF3I	CTNAG	3 cut(s)	332, 522, 774
HpySE526I	ACGT	3 cut(s)	11, 1944, 2050
Hsp92I	GRCGYC	2 cut(s)	11, 2180
Hsp92II	CATG	7 cut(s)	28, 109, 1162, 1465, 1730, 1772, 2416
HspAI	GCGC	3 cut(s)	162, 222, 2180
KasI	GGCGCC	1 cut(s)	2179
Ksp22I	TGATCA	1 cut(s)	1099
KspI	CCGCGG	2 cut(s)	274, 1533
Kzo9I	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
Lsp1109I	GCAGC	6 cut(s)	339, 937, 985, 1354, 1621, 2327
LweI	GCATC	2 cut(s)	787, 1132
MaeI	CTAG	6 cut(s)	666, 1214, 1448, 1545, 1986, 2078
MaeII	ACGT	3 cut(s)	11, 1944, 2050
MaeIII	GTNAC	4 cut(s)	1301, 1900, 2029, 2071
MalI	GATC	8 cut(s)	301, 624, 1101, 1515, 1725, 1860, 1955, 2253
MbiI	CCGCTC	3 cut(s)	172, 207, 283
MboI	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
MfeI	CAATTG	1 cut(s)	1266
MflI	RGATCY	2 cut(s)	299, 1953
MhlI	GDGCHC	3 cut(s)	260, 638, 2284
MluCI	AATT	9 cut(s)	110, 263, 1266, 1282, 1320, 1385, 1698, 2000, 2192
Mly113I	GGCGCC	1 cut(s)	2180
MlyI	GAGTC	4 cut(s)	748, 1061, 1067, 1097
MmeI	TCCRAC	1 cut(s)	513
MseI	TTAA	5 cut(s)	33, 846, 1839, 2211, 2469
MslI	CAYNNNNRTG	2 cut(s)	1163, 1745
MspA1I	CMGCKG	4 cut(s)	273, 1061, 1532, 2102
MspCI	CTTAAG	1 cut(s)	2468
MspR9I	CCNGG	6 cut(s)	235, 250, 1231, 1500, 2027, 2481
MunI	CAATTG	1 cut(s)	1266
Mva1269I	GAATGC	1 cut(s)	2094
MvaI	CCWGG	2 cut(s)	2027, 2481
MvnI	CGCG	5 cut(s)	162, 222, 273, 600, 1532
NarI	GGCGCC	1 cut(s)	2180
NciI	CCSGG	4 cut(s)	235, 250, 1231, 1500
NdeII	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
NlaIII	CATG	7 cut(s)	28, 109, 1162, 1465, 1730, 1772, 2416
NlaIV	GGNNCC	8 cut(s)	118, 199, 259, 301, 487, 1607, 2181, 2235
NmeAIII	GCCGAG	2 cut(s)	174, 352
NmuCI	GTSAC	3 cut(s)	1301, 1900, 2029
NspI	RCATGY	2 cut(s)	1465, 1772
OliI	CACNNNNGTG	1 cut(s)	1745
PaeI	GCATGC	1 cut(s)	1465
PaeR7I	CTCGAG	1 cut(s)	1347
PagI	TCATGA	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	2 cut(s)	17, 324
PctI	GAATGC	1 cut(s)	2094
PfeI	GAWTC	4 cut(s)	383, 839, 1360, 1483
PflFI	GACNNNGTC	1 cut(s)	341
PleI	GAGTC	4 cut(s)	747, 1061, 1067, 1096
PluTI	GGCGCC	1 cut(s)	2183
PmaCI	CACGTG	1 cut(s)	2051
PmlI	CACGTG	1 cut(s)	2051
PpsI	GAGTC	4 cut(s)	747, 1061, 1067, 1096
Ppu21I	YACGTR	1 cut(s)	2051
PpuMI	RGGWCCY	1 cut(s)	1564
Psp124BI	GAGCTC	2 cut(s)	638, 2284
Psp1406I	AACGTT	1 cut(s)	1944
Psp5II	RGGWCCY	1 cut(s)	1564
Psp6I	CCWGG	2 cut(s)	2025, 2479
PspCI	CACGTG	1 cut(s)	2051
PspEI	GGTNACC	1 cut(s)	1900
PspGI	CCWGG	2 cut(s)	2025, 2479
PspN4I	GGNNCC	8 cut(s)	118, 199, 259, 301, 487, 1607, 2181, 2235
PspPI	GGNCC	5 cut(s)	116, 357, 641, 1564, 1690
PspPPI	RGGWCCY	1 cut(s)	1564
PstI	CTGCAG	1 cut(s)	1372
PsuI	RGATCY	2 cut(s)	299, 1953
PsyI	GACNNNGTC	1 cut(s)	341
PvuII	CAGCTG	2 cut(s)	1061, 2102
RsaI	GTAC	6 cut(s)	147, 1170, 1329, 1435, 1572, 2241
RsaNI	GTAC	6 cut(s)	146, 1169, 1328, 1434, 1571, 2240
RseI	CAYNNNNRTG	2 cut(s)	1163, 1745
Rsr2I	CGGWCCG	2 cut(s)	357, 641
RsrII	CGGWCCG	2 cut(s)	357, 641
SacI	GAGCTC	2 cut(s)	638, 2284
SacII	CCGCGG	2 cut(s)	274, 1533
SalI	GTCGAC	1 cut(s)	314
SaqAI	TTAA	5 cut(s)	33, 846, 1839, 2211, 2469
Sau3AI	GATC	8 cut(s)	299, 622, 1099, 1513, 1723, 1858, 1953, 2251
Sau96I	GGNCC	5 cut(s)	116, 357, 641, 1564, 1690
SchI	GAGTC	4 cut(s)	748, 1061, 1067, 1097
ScrFI	CCNGG	6 cut(s)	235, 250, 1231, 1500, 2027, 2481
SduI	GDGCHC	3 cut(s)	260, 638, 2284
SfaNI	GCATC	2 cut(s)	787, 1132
SfcI	CTRYAG	1 cut(s)	1368
SfoI	GGCGCC	1 cut(s)	2181
Sfr274I	CTCGAG	1 cut(s)	1347
Sfr303I	CCGCGG	2 cut(s)	274, 1533
SgrBI	CCGCGG	2 cut(s)	274, 1533
SinI	GGWCC	5 cut(s)	116, 357, 641, 1564, 1690
SlaI	CTCGAG	1 cut(s)	1347
SmiMI	CAYNNNNRTG	2 cut(s)	1163, 1745
SmlI	CTYRAG	2 cut(s)	1347, 2468
SmoI	CTYRAG	2 cut(s)	1347, 2468
SphI	GCATGC	1 cut(s)	1465
Sse9I	AATT	9 cut(s)	110, 263, 1266, 1282, 1320, 1385, 1698, 2000, 2192
SspDI	GGCGCC	1 cut(s)	2179
SspI	AATATT	1 cut(s)	2169
SspMI	CTAG	6 cut(s)	666, 1214, 1448, 1545, 1986, 2078
SstI	GAGCTC	2 cut(s)	638, 2284
StyD4I	CCNGG	6 cut(s)	233, 248, 1229, 1498, 2025, 2479
StyI	CCWWGG	3 cut(s)	665, 2183, 2229
TaaI	ACNGT	6 cut(s)	1122, 1165, 1246, 1678, 1744, 2115
TaiI	ACGT	3 cut(s)	14, 1947, 2053
TaqI	TCGA	6 cut(s)	315, 611, 761, 842, 1348, 2125
TaqII	GACCGA	4 cut(s)	374, 501, 646, 1099
TasI	AATT	9 cut(s)	110, 263, 1266, 1282, 1320, 1385, 1698, 2000, 2192
TatI	WGTACW	1 cut(s)	1327
TauI	GCSGC	4 cut(s)	480, 483, 486, 1004
TfiI	GAWTC	4 cut(s)	383, 839, 1360, 1483
Tru1I	TTAA	5 cut(s)	33, 846, 1839, 2211, 2469
Tru9I	TTAA	5 cut(s)	33, 846, 1839, 2211, 2469
TscAI	CASTG	3 cut(s)	1109, 1125, 1762
TseFI	GTSAC	3 cut(s)	1301, 1900, 2029
TseI	GCWGC	6 cut(s)	352, 950, 998, 1367, 1634, 2315
Tsp45I	GTSAC	3 cut(s)	1301, 1900, 2029
TspDTI	ATGAA	7 cut(s)	17, 122, 990, 1593, 1743, 2013, 2111
TspGWI	ACGGA	4 cut(s)	547, 633, 1598, 1682
TspRI	CASTG	3 cut(s)	1109, 1125, 1762
Tth111I	GACNNNGTC	1 cut(s)	341
Vha464I	CTTAAG	1 cut(s)	2468
VpaK11BI	GGWCC	5 cut(s)	116, 357, 641, 1564, 1690
XapI	RAATTY	5 cut(s)	110, 1282, 1698, 2000, 2192
XbaI	TCTAGA	1 cut(s)	1447
XceI	RCATGY	2 cut(s)	1465, 1772
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2330, 2443
XhoI	CTCGAG	1 cut(s)	1347
XmaJI	CCTAGG	1 cut(s)	665
XmiI	GTMKAC	1 cut(s)	315
XspI	CTAG	6 cut(s)	666, 1214, 1448, 1545, 1986, 2078
ZraI	GACGTC	1 cut(s)	12

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.