Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010499

Physical Location & Seq

Genomic Coordinates Reverse (-)

16781886 .. 16786018

Gene Structure 4133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g14720.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGAAAGCGACGTCGCTTTCGGCAACTTTCATGCCCGTCGGACTCTTACCCCAACTCCGACTCCTCAGCACCTCTGTTCCGGCGACCCGTTACCCGCCCATGAAATTCGCGCCTTCCATTTCGTCCTCTCAGGCCGTACCCATTTTGTCGCGGGTCTTCCCCTTGAGGCTTAGGTACGTAGGGTTGGGGCTTCGTCGCTCTCTGCAGACTGAGCGAGCATTTTCAACTCGGGCGTTCCGGGGCTCCAGGACCGGGTCGGGGTCCGAGTTGCCACGTGCCTACGAGAGAAGAGCGGGTGGAGCTTCGAAGAGTCTGATTGAGGACGAGGCTGAGCTCAGTGACTGGGTCAGCGAGTTAAAGAGTGACTCGCGCGGCGAATCGGAGGGCCGTAGGGTGACGGTTGGAGAGAGGGGTACCGACATGGACTCTTATCCGATGAAGAGGAGCAGGAGAGATAGTGACTCTGGAGATTTTGGTGATTCTAAAAGGCGAGAATTTCGATCACCGAATCAGTCTTTTTCGAGAAATTCGGGGATGAGTAAGCGATTTGATAATAAATCTGAGGGTGATAGGAAAGAGAGAGCATTTCCACCCAGAAACAGTCGTGGGAATCCGAATTCAAATGGCGATTTTGGAGATTTGAGTAGGCGAAGATTTCCGGCCCAAAATGATTCCTTTTCGAGAAATGCAGGGACAAGTAATCGCTTTGATAACAAATTTCGGAGTGATGATGACAAGGAAGACAGATTTCCCCGTAGAAACAATCGTGGGGACTCGAATTCGTTTTCAAAAGGTAGTTCGAGTTCAAAGGTGAAAGGGGAATCATTTACCAGGAATAGAGGTGGAAGAGATTCGGGTAAAGAATTGCGAGTAATGGATGATACTGAAGAGGAGGAGGTAAAACCATTTGGTGGTATTGGGGATTTTCTTAGTGAGGAAGAGAGTGACACTGCTGCTTCTGATGATGATGGTTTTGGAGCATTAAGAGAAAAAAATGCAGCTTCCTTGCTTCGCGGTTCGGATGATGAAGTGAGCAAAAGGGTTCTGCCTAAAAGTTCAGCTGGAAGCTCTGACTCTTATTTGAGTGAATCGCGGTTTGATCAATGTTCGGTCTCTCCACTGTCCTTGAAAGGAATCAAGGACGCAGGATATGAAAAGATGACTGTAGTGCAAGAAGCTACTCTTCCAGTAATATTGAAAGGCAAGGATGTGCTGGCCAAGGCTAGAACAGGCACTGGAAAAACTGTGGCGTTCTTGCTTCCATCAATTGAAGTTGTTGTAAATTCGCCTCCTATTACCCGTGATAACAAGCGACCACCAATTTTTGTACTTGTTATATGCCCAACCAGGGAGTTGGCAAGTCAAGCTGCTACTGAAGCCAATAAGTTGTTGAAATATCATCCCTCTGTTGGTGTCCAAGTTGTGATCGGTGGTACACGACTTGCTTTAGAACAGAAACGTATCCAAGCCAACCCTTGCCAGATTCTTGTCGCTACACCTGGAAGGCTCAAAGATCACATTGAGAATACCGCAGGTTTTGCAACTAGGCTGATGGGTGTCAAAGTCCTTGTACTTGATGAAGCTGATCATTTACTGGATATGGGATTCCGTAAAGATATTGAAAGGATTATATCAGCTGTTCCCAAACAACGGCAGACACTTTTGTTTTCCGCCACTGTTCCGGAAGAGGTCGCACAGACGCATTTGGTCGCTCCATTGGACAGGCATTTTTCCTTAGTATATAGTCTTCTTAAAGAGCATATTGCAGATGATGTTGACTATAAGGTTCTTGTATTCTGCACTACCGCTATGGTAACACGACTGGTTGCAGACCTTCTTGGTGAGCTGAACTTGAATGTCAGAGAGATCGATTCTAGAAAGCCACAGAGTTATAGAACCAGGGTTTCTGATGAATTTCGGAAATCAAAGGGTCTTATTCTTGTGACTTCTGATGTATCTGCACGTGGGGTTGATTATCCAGATGTTTCCCTAGTCATACAGGTGGGCGTGCCAGCCGATAGACAACAGTATATACATCGACTTGGAAGAACTGGTCGTAAAGGCAAAGTGGGGCAAGGGATATTGCTACTGGCTCCTTGGGAGGAGTTCTTCTTGTCCAATATTAAGGATTTGCCAATATCCAAGGCTGCTGTACCGTCAGTCGATCCAGATACTACGAAGAAGGTGGAACGAGCACTGTCCAAGGTGGAGATGAAGAACAAAGAAGCAGCGTACCAAGCATGGCTCGGGTATTACAATTCAAACAAGAAAGTGGGGCGCGATAAGCATAGGCTTGTGGAGCTTGCTAATGAATTTAGCCGAAGCATGGGGCTGGACAACCCTCCGGCCATTCCCAAGCTCGTTCTTGGCAAGATGGGGCTTAAGAATGTCCCTGGATTGCGTTCCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

804

Amino Acids

88.86

Weight (kDa)

9.67

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010499)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63630 AT5G63630
fragaria_vesca	FvH4_7g16280
malus_domestica	MD01G1079300.v1.1 MD07G1148200.v1.1
prunus_persica	Prupe.2G186500_v2.0.a1
pyrus_communis	pycom01g10760 pycom07g14720
rosa_chinensis	RchiOBHm_Chr1g0359291
rosa_laevigata	RLG00000027883
rosa_multiflora	Rmu_co8196408.1_g000001 Rmu_ssc0000135.1_g000038
rosa_roxburghii	Rroxscaffold_4G00297140 Rroxscaffold_5G00348520
rosa_rugosa	Rorug01G0269200
rosa_samantha	Rh1AG283200 Rh1BG249400 Rh1CG267300 Rh1DG278300 Rh2AG248100
rosa_wichuraiana	Rw1G025140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	14
Acc36I	ACCTGC	1 cut(s)	1523
Acc65I	GGTACC	1 cut(s)	413
AccB1I	GGYRCC	1 cut(s)	413
AccB7I	CCANNNNNTGG	1 cut(s)	911
AccBSI	CCGCTC	1 cut(s)	293
AccII	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
AccIII	TCCGGA	1 cut(s)	1681
AciI	CCGC	9 cut(s)	95, 151, 293, 372, 1014, 1093, 1530, 1671, 1806
AclWI	GGATC	1 cut(s)	2159
AcoI	YGGCCR	2 cut(s)	1215, 2346
AcsI	RAATTY	9 cut(s)	104, 494, 526, 616, 716, 778, 1282, 1913, 2312
AcuI	CTGAAG	2 cut(s)	906, 1395
AcvI	CACGTG	2 cut(s)	275, 1964
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	8 cut(s)	138, 176, 415, 1329, 1435, 1572, 2154, 2234
AfiI	CCNNNNNNNGG	7 cut(s)	252, 258, 911, 1348, 1409, 1650, 2326
AflII	CTTAAG	1 cut(s)	2381
AjnI	CCWGG	6 cut(s)	245, 830, 1346, 1498, 1898, 2392
Alw21I	GWGCWC	2 cut(s)	336, 2197
Alw26I	GTCTC	1 cut(s)	1117
AlwI	GGATC	1 cut(s)	2159
AlwNI	CAGNNNCTG	2 cut(s)	342, 1235
Ama87I	CYCGRG	2 cut(s)	228, 2246
Aor13HI	TCCGGA	1 cut(s)	1681
AoxI	GGCC	5 cut(s)	132, 385, 660, 1215, 2346
ApeKI	GCWGC	5 cut(s)	953, 998, 1367, 2147, 2228
ApoI	RAATTY	9 cut(s)	104, 494, 526, 616, 716, 778, 1282, 1913, 2312
ArsI	GACNNNNNNTTYG	1 cut(s)	33
Asp700I	GAANNNNTTC	1 cut(s)	850
Asp718I	GGTACC	1 cut(s)	413
AspLEI	GCGC	3 cut(s)	112, 372, 2280
AspS9I	GGNCC	4 cut(s)	249, 261, 385, 661
AsuC2I	CCSGG	2 cut(s)	239, 253
AsuHPI	GGTGA	6 cut(s)	406, 488, 495, 578, 823, 1853
AsuII	TTCGAA	1 cut(s)	305
AvaI	CYCGRG	2 cut(s)	228, 2246
AvaII	GGWCC	2 cut(s)	249, 261
BalI	TGGCCA	1 cut(s)	1217
BanI	GGYRCC	1 cut(s)	413
BanII	GRGCYC	2 cut(s)	245, 336
BarI	GAAGNNNNNNTAC	2 cut(s)	1731, 1763
BbrPI	CACGTG	2 cut(s)	275, 1964
BbsI	GAAGAC	3 cut(s)	148, 747, 1739
Bbv12I	GWGCWC	2 cut(s)	336, 2197
BbvCI	CCTCAGC	1 cut(s)	65
BbvI	GCAGC	5 cut(s)	940, 1010, 1354, 2134, 2240
BccI	CCATC	4 cut(s)	962, 1270, 1546, 2368
BceAI	ACGGC	3 cut(s)	119, 372, 1667
BciT130I	CCWGG	6 cut(s)	247, 832, 1348, 1500, 1900, 2394
BciVI	GTATCC	1 cut(s)	1472
BclI	TGATCA	2 cut(s)	1099, 1585
BcnI	CCSGG	2 cut(s)	239, 253
BcoDI	GTCTC	1 cut(s)	1117
BfaI	CTAG	4 cut(s)	1224, 1545, 1875, 1991
BfmI	CTRYAG	2 cut(s)	203, 1164
BfrI	CTTAAG	1 cut(s)	2381
BfuAI	ACCTGC	1 cut(s)	1523
BfuI	GTATCC	1 cut(s)	1472
BisI	GCNGC	6 cut(s)	373, 954, 999, 1368, 2148, 2229
BlpI	GCTNAGC	1 cut(s)	330
BlsI	GCNGC	6 cut(s)	374, 955, 1000, 1369, 2149, 2230
Bme1390I	CCNGG	8 cut(s)	239, 247, 253, 832, 1348, 1500, 1900, 2394
Bme18I	GGWCC	2 cut(s)	249, 261
BmeT110I	CYCGRG	2 cut(s)	228, 2246
BmgT120I	GGNCC	4 cut(s)	249, 261, 385, 661
BmiI	GGNNCC	4 cut(s)	244, 262, 415, 2094
BmrFI	CCNGG	8 cut(s)	239, 247, 253, 832, 1348, 1500, 1900, 2394
BmrI	ACTGGG	1 cut(s)	352
BmuI	ACTGGG	1 cut(s)	352
BpiI	GAAGAC	3 cut(s)	148, 747, 1739
BpmI	CTGGAG	2 cut(s)	229, 486
Bpu10I	CCTNAGC	2 cut(s)	65, 170
Bpu1102I	GCTNAGC	1 cut(s)	330
Bpu14I	TTCGAA	1 cut(s)	305
BpuEI	CTTGAG	1 cut(s)	184
BpuMI	CCSGG	2 cut(s)	239, 253
Bsa29I	ATCGAT	1 cut(s)	1869
BsaAI	YACGTR	3 cut(s)	178, 275, 1964
BsaHI	GRCGYC	1 cut(s)	11
BsaI	GGTCTC	1 cut(s)	1117
BsaJI	CCNNGG	8 cut(s)	238, 1218, 1347, 1899, 2096, 2142, 2202, 2392
BsaWI	WCCGGW	1 cut(s)	1681
BsaXI	ACNNNNNCTCC	6 cut(s)	39, 45, 69, 75, 442, 472
Bsc4I	CCNNNNNNNGG	7 cut(s)	252, 258, 911, 1348, 1409, 1650, 2326
Bse1I	ACTGG	7 cut(s)	347, 1187, 1240, 1599, 1827, 2056, 2094
BseAI	TCCGGA	1 cut(s)	1681
BseBI	CCWGG	6 cut(s)	247, 832, 1348, 1500, 1900, 2394
BseCI	ATCGAT	1 cut(s)	1869
BseDI	CCNNGG	8 cut(s)	238, 1218, 1347, 1899, 2096, 2142, 2202, 2392
BseGI	GGATG	5 cut(s)	540, 883, 1027, 1213, 1399
BseLI	CCNNNNNNNGG	7 cut(s)	252, 258, 911, 1348, 1409, 1650, 2326
BseMII	CTCAG	6 cut(s)	79, 143, 201, 321, 349, 552
BseNI	ACTGG	7 cut(s)	347, 1187, 1240, 1599, 1827, 2056, 2094
BseRI	GAGGAG	5 cut(s)	53, 457, 905, 908, 2117
BseXI	GCAGC	5 cut(s)	940, 1010, 1354, 2134, 2240
BsgI	GTGCAG	2 cut(s)	1783, 1944
Bsh1236I	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
BshFI	GGCC	5 cut(s)	134, 387, 662, 1217, 2348
BshNI	GGYRCC	1 cut(s)	413
BshVI	ATCGAT	1 cut(s)	1869
BsiHKAI	GWGCWC	2 cut(s)	336, 2197
BsiHKCI	CYCGRG	2 cut(s)	228, 2246
BsiSI	CCGG	6 cut(s)	80, 238, 252, 659, 1682, 2345
BslFI	GGGAC	3 cut(s)	706, 785, 2375
BslI	CCNNNNNNNGG	7 cut(s)	252, 258, 911, 1348, 1409, 1650, 2326
BsmAI	GTCTC	1 cut(s)	1117
BsmFI	GGGAC	3 cut(s)	706, 785, 2375
BsnI	GGCC	5 cut(s)	134, 387, 662, 1217, 2348
Bso31I	GGTCTC	1 cut(s)	1117
BsoBI	CYCGRG	2 cut(s)	228, 2246
Bsp119I	TTCGAA	1 cut(s)	305
Bsp1286I	GDGCHC	3 cut(s)	245, 336, 2197
Bsp13I	TCCGGA	1 cut(s)	1681
Bsp143I	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
Bsp1720I	GCTNAGC	1 cut(s)	330
BspACI	CCGC	9 cut(s)	95, 151, 293, 372, 1014, 1093, 1530, 1671, 1806
BspANI	GGCC	5 cut(s)	134, 387, 662, 1217, 2348
BspCNI	CTCAG	6 cut(s)	78, 142, 202, 322, 348, 553
BspDI	ATCGAT	1 cut(s)	1869
BspEI	TCCGGA	1 cut(s)	1681
BspFNI	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
BspLI	GGNNCC	4 cut(s)	244, 262, 415, 2094
BspMAI	CTGCAG	1 cut(s)	207
BspMI	ACCTGC	1 cut(s)	1523
BspPI	GGATC	1 cut(s)	2159
BspQI	GCTCTTC	1 cut(s)	283
BspT104I	TTCGAA	1 cut(s)	305
BspT107I	GGYRCC	1 cut(s)	413
BspTI	CTTAAG	1 cut(s)	2381
BspTNI	GGTCTC	1 cut(s)	1117
BsrBI	CCGCTC	1 cut(s)	293
BsrI	ACTGG	7 cut(s)	347, 1187, 1240, 1599, 1827, 2056, 2094
BssECI	CCNNGG	8 cut(s)	238, 1218, 1347, 1899, 2096, 2142, 2202, 2392
BssMI	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
BssNI	GRCGYC	1 cut(s)	11
BssT1I	CCWWGG	4 cut(s)	1218, 2096, 2142, 2202
Bst2UI	CCWGG	6 cut(s)	247, 832, 1348, 1500, 1900, 2394
Bst4CI	ACNGT	9 cut(s)	400, 602, 1122, 1165, 1246, 1678, 2028, 2157, 2199
Bst6I	CTCTTC	8 cut(s)	283, 302, 434, 841, 882, 933, 1188, 1680
BstACI	GRCGYC	1 cut(s)	11
BstAFI	CTTAAG	1 cut(s)	2381
BstAPI	GCANNNNNTGC	1 cut(s)	1538
BstBAI	YACGTR	3 cut(s)	178, 275, 1964
BstBI	TTCGAA	1 cut(s)	305
BstC8I	GCNNGC	5 cut(s)	216, 1215, 2009, 2013, 2304
BstDEI	CTNAG	9 cut(s)	65, 129, 170, 210, 330, 335, 561, 929, 1735
BstF5I	GGATG	5 cut(s)	540, 883, 1027, 1213, 1399
BstFNI	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
BstHHI	GCGC	3 cut(s)	112, 372, 2280
BstKTI	GATC	7 cut(s)	503, 1102, 1428, 1516, 1588, 1869, 2167
BstMAI	GTCTC	1 cut(s)	1117
BstMBI	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
BstMWI	GCNNNNNNNGC	8 cut(s)	211, 299, 1364, 1376, 1538, 2237, 2284, 2299
BstNI	CCWGG	6 cut(s)	247, 832, 1348, 1500, 1900, 2394
BstSCI	CCNGG	8 cut(s)	237, 245, 251, 830, 1346, 1498, 1898, 2392
BstSFI	CTRYAG	2 cut(s)	203, 1164
BstSNI	TACGTA	1 cut(s)	178
BstUI	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
BstV1I	GCAGC	5 cut(s)	940, 1010, 1354, 2134, 2240
BstV2I	GAAGAC	3 cut(s)	148, 747, 1739
BstXI	CCANNNNNNTGG	1 cut(s)	1354
Bsu15I	ATCGAT	1 cut(s)	1869
BsuI	GTATCC	1 cut(s)	1472
BsuRI	GGCC	5 cut(s)	134, 387, 662, 1217, 2348
BsuTUI	ATCGAT	1 cut(s)	1869
BtsCI	GGATG	5 cut(s)	540, 883, 1027, 1213, 1399
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	6 cut(s)	343, 948, 1118, 1233, 1674, 2195
BveI	ACCTGC	1 cut(s)	1523
Cac8I	GCNNGC	5 cut(s)	216, 1215, 2009, 2013, 2304
CaiI	CAGNNNCTG	2 cut(s)	342, 1235
CfoI	GCGC	3 cut(s)	112, 372, 2280
Cfr13I	GGNCC	4 cut(s)	249, 261, 385, 661
ClaI	ATCGAT	1 cut(s)	1869
CseI	GACGC	2 cut(s)	1151, 1708
Csp6I	GTAC	8 cut(s)	137, 175, 414, 1328, 1434, 1571, 2153, 2233
CspCI	CAANNNNNGTGG	2 cut(s)	1107, 1142
CviAII	CATG	5 cut(s)	31, 100, 421, 2241, 2326
CviQI	GTAC	8 cut(s)	137, 175, 414, 1328, 1434, 1571, 2153, 2233
DdeI	CTNAG	9 cut(s)	65, 129, 170, 210, 330, 335, 561, 929, 1735
DpnI	GATC	7 cut(s)	502, 1101, 1427, 1515, 1587, 1868, 2166
DpnII	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
EaeI	YGGCCR	2 cut(s)	1215, 2346
Eam1104I	CTCTTC	8 cut(s)	283, 302, 434, 841, 882, 933, 1188, 1680
EarI	CTCTTC	8 cut(s)	283, 302, 434, 841, 882, 933, 1188, 1680
EciI	GGCGGA	1 cut(s)	1660
Ecl136II	GAGCTC	1 cut(s)	334
Eco105I	TACGTA	1 cut(s)	178
Eco130I	CCWWGG	4 cut(s)	1218, 2096, 2142, 2202
Eco24I	GRGCYC	2 cut(s)	245, 336
Eco31I	GGTCTC	1 cut(s)	1117
Eco47I	GGWCC	2 cut(s)	249, 261
Eco53kI	GAGCTC	1 cut(s)	334
Eco57I	CTGAAG	2 cut(s)	906, 1395
Eco72I	CACGTG	2 cut(s)	275, 1964
Eco88I	CYCGRG	2 cut(s)	228, 2246
EcoICRI	GAGCTC	1 cut(s)	334
EcoRI	GAATTC	2 cut(s)	616, 778
EcoRII	CCWGG	6 cut(s)	245, 830, 1346, 1498, 1898, 2392
EcoT14I	CCWWGG	4 cut(s)	1218, 2096, 2142, 2202
EcoT38I	GRGCYC	2 cut(s)	245, 336
ErhI	CCWWGG	4 cut(s)	1218, 2096, 2142, 2202
FaeI	CATG	5 cut(s)	34, 103, 424, 2244, 2329
FalI	AAGNNNNNCTT	2 cut(s)	1167, 1199
FaqI	GGGAC	3 cut(s)	706, 785, 2375
FatI	CATG	5 cut(s)	30, 99, 420, 2240, 2325
FauI	CCCGC	3 cut(s)	102, 144, 286
FbaI	TGATCA	2 cut(s)	1099, 1585
Fnu4HI	GCNGC	6 cut(s)	373, 954, 999, 1368, 2148, 2229
FokI	GGATG	5 cut(s)	547, 890, 1034, 1220, 1386
FriOI	GRGCYC	2 cut(s)	245, 336
Fsp4HI	GCNGC	6 cut(s)	373, 954, 999, 1368, 2148, 2229
FspBI	CTAG	4 cut(s)	1224, 1545, 1875, 1991
GlaI	GCGC	3 cut(s)	111, 371, 2279
GluI	GCNGC	6 cut(s)	373, 954, 999, 1368, 2148, 2229
GsuI	CTGGAG	2 cut(s)	229, 486
HaeIII	GGCC	5 cut(s)	134, 387, 662, 1217, 2348
HapII	CCGG	6 cut(s)	80, 238, 252, 659, 1682, 2345
HgaI	GACGC	2 cut(s)	1151, 1708
HhaI	GCGC	3 cut(s)	112, 372, 2280
Hin1I	GRCGYC	1 cut(s)	11
Hin1II	CATG	5 cut(s)	34, 103, 424, 2244, 2329
Hin6I	GCGC	3 cut(s)	110, 370, 2278
HinP1I	GCGC	3 cut(s)	110, 370, 2278
HincII	GTYRAC	1 cut(s)	1777
HindII	GTYRAC	1 cut(s)	1777
HpaII	CCGG	6 cut(s)	80, 238, 252, 659, 1682, 2345
HphI	GGTGA	6 cut(s)	406, 488, 495, 578, 823, 1853
Hpy166II	GTNNAC	2 cut(s)	1436, 1777
Hpy188III	TCNNGA	7 cut(s)	465, 522, 681, 1682, 1875, 1979, 2168
Hpy8I	GTNNAC	2 cut(s)	1436, 1777
Hpy99I	CGWCG	4 cut(s)	13, 16, 41, 198
HpyAV	CCTTC	4 cut(s)	123, 1497, 1844, 2176
HpyCH4III	ACNGT	9 cut(s)	400, 602, 1122, 1165, 1246, 1678, 2028, 2157, 2199
HpyCH4IV	ACGT	5 cut(s)	11, 177, 274, 1459, 1963
HpyCH4V	TGCA	9 cut(s)	205, 689, 998, 1171, 1541, 1766, 1800, 1829, 1961
HpyF10VI	GCNNNNNNNGC	8 cut(s)	211, 299, 1364, 1376, 1538, 2237, 2284, 2299
HpyF3I	CTNAG	9 cut(s)	65, 129, 170, 210, 330, 335, 561, 929, 1735
HpySE526I	ACGT	5 cut(s)	11, 177, 274, 1459, 1963
Hsp92I	GRCGYC	1 cut(s)	11
Hsp92II	CATG	5 cut(s)	34, 103, 424, 2244, 2329
HspAI	GCGC	3 cut(s)	110, 370, 2278
Kpn2I	TCCGGA	1 cut(s)	1681
KpnI	GGTACC	1 cut(s)	417
Ksp22I	TGATCA	2 cut(s)	1099, 1585
Kzo9I	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
LguI	GCTCTTC	1 cut(s)	283
LmnI	GCTCC	7 cut(s)	248, 299, 444, 977, 1717, 2098, 2299
Lsp1109I	GCAGC	5 cut(s)	940, 1010, 1354, 2134, 2240
MaeI	CTAG	4 cut(s)	1224, 1545, 1875, 1991
MaeII	ACGT	5 cut(s)	11, 177, 274, 1459, 1963
MaeIII	GTNAC	8 cut(s)	89, 338, 362, 394, 458, 944, 1813, 1942
MalI	GATC	7 cut(s)	502, 1101, 1427, 1515, 1587, 1868, 2166
MbiI	CCGCTC	1 cut(s)	293
MboI	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
MfeI	CAATTG	1 cut(s)	1266
MhlI	GDGCHC	3 cut(s)	245, 336, 2197
MlsI	TGGCCA	1 cut(s)	1217
MluNI	TGGCCA	1 cut(s)	1217
MlyI	GAGTC	8 cut(s)	36, 54, 319, 359, 419, 455, 767, 1067
MmeI	TCCRAC	3 cut(s)	19, 82, 382
Mox20I	TGGCCA	1 cut(s)	1217
MroI	TCCGGA	1 cut(s)	1681
MroXI	GAANNNNTTC	1 cut(s)	850
MscI	TGGCCA	1 cut(s)	1217
MseI	TTAA	5 cut(s)	356, 983, 1752, 2124, 2382
MslI	CAYNNNNRTG	1 cut(s)	2000
Msp20I	TGGCCA	1 cut(s)	1217
MspA1I	CMGCKG	2 cut(s)	1061, 1637
MspCI	CTTAAG	1 cut(s)	2381
MspI	CCGG	6 cut(s)	80, 238, 252, 659, 1682, 2345
MspR9I	CCNGG	8 cut(s)	239, 247, 253, 832, 1348, 1500, 1900, 2394
MunI	CAATTG	1 cut(s)	1266
MvaI	CCWGG	6 cut(s)	247, 832, 1348, 1500, 1900, 2394
MvnI	CGCG	7 cut(s)	110, 151, 370, 372, 1014, 1093, 2280
MwoI	GCNNNNNNNGC	8 cut(s)	211, 299, 1364, 1376, 1538, 2237, 2284, 2299
NciI	CCSGG	2 cut(s)	239, 253
NdeII	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
NlaIII	CATG	5 cut(s)	34, 103, 424, 2244, 2329
NlaIV	GGNNCC	4 cut(s)	244, 262, 415, 2094
NmuCI	GTSAC	6 cut(s)	338, 362, 394, 458, 944, 1942
NspV	TTCGAA	1 cut(s)	305
PciSI	GCTCTTC	1 cut(s)	283
PdmI	GAANNNNTTC	1 cut(s)	850
PflFI	GACNNNGTC	2 cut(s)	253, 344
PflMI	CCANNNNNTGG	1 cut(s)	911
PfoI	TCCNGGA	1 cut(s)	245
PkrI	GCNGC	6 cut(s)	374, 955, 1000, 1369, 2149, 2230
PleI	GAGTC	8 cut(s)	36, 54, 318, 359, 419, 455, 767, 1067
PmaCI	CACGTG	2 cut(s)	275, 1964
PmlI	CACGTG	2 cut(s)	275, 1964
PpsI	GAGTC	8 cut(s)	36, 54, 318, 359, 419, 455, 767, 1067
Ppu21I	YACGTR	3 cut(s)	178, 275, 1964
Psp124BI	GAGCTC	1 cut(s)	336
Psp6I	CCWGG	6 cut(s)	245, 830, 1346, 1498, 1898, 2392
PspCI	CACGTG	2 cut(s)	275, 1964
PspGI	CCWGG	6 cut(s)	245, 830, 1346, 1498, 1898, 2392
PspN4I	GGNNCC	4 cut(s)	244, 262, 415, 2094
PspPI	GGNCC	4 cut(s)	249, 261, 385, 661
PsrI	GAACNNNNNNTAC	2 cut(s)	787, 819
PstI	CTGCAG	1 cut(s)	207
PstNI	CAGNNNCTG	2 cut(s)	342, 1235
PsyI	GACNNNGTC	2 cut(s)	253, 344
PvuII	CAGCTG	2 cut(s)	1061, 1637
RsaI	GTAC	8 cut(s)	138, 176, 415, 1329, 1435, 1572, 2154, 2234
RsaNI	GTAC	8 cut(s)	137, 175, 414, 1328, 1434, 1571, 2153, 2233
RseI	CAYNNNNRTG	1 cut(s)	2000
SacI	GAGCTC	1 cut(s)	336
SapI	GCTCTTC	1 cut(s)	283
SaqAI	TTAA	5 cut(s)	356, 983, 1752, 2124, 2382
SatI	GCNGC	6 cut(s)	373, 954, 999, 1368, 2148, 2229
Sau3AI	GATC	7 cut(s)	500, 1099, 1425, 1513, 1585, 1866, 2164
Sau96I	GGNCC	4 cut(s)	249, 261, 385, 661
SchI	GAGTC	8 cut(s)	36, 54, 319, 359, 419, 455, 767, 1067
ScrFI	CCNGG	8 cut(s)	239, 247, 253, 832, 1348, 1500, 1900, 2394
SduI	GDGCHC	3 cut(s)	245, 336, 2197
SfcI	CTRYAG	2 cut(s)	203, 1164
SfuI	TTCGAA	1 cut(s)	305
SinI	GGWCC	2 cut(s)	249, 261
SmiMI	CAYNNNNRTG	1 cut(s)	2000
SmlI	CTYRAG	2 cut(s)	163, 2381
SmoI	CTYRAG	2 cut(s)	163, 2381
SnaBI	TACGTA	1 cut(s)	178
SsiI	CCGC	9 cut(s)	95, 151, 293, 372, 1014, 1093, 1530, 1671, 1806
SspI	AATATT	2 cut(s)	1194, 2122
SspMI	CTAG	4 cut(s)	1224, 1545, 1875, 1991
SstI	GAGCTC	1 cut(s)	336
StyD4I	CCNGG	8 cut(s)	237, 245, 251, 830, 1346, 1498, 1898, 2392
StyI	CCWWGG	4 cut(s)	1218, 2096, 2142, 2202
TaaI	ACNGT	9 cut(s)	400, 602, 1122, 1165, 1246, 1678, 2028, 2157, 2199
TaiI	ACGT	5 cut(s)	14, 180, 277, 1462, 1966
TaqI	TCGA	9 cut(s)	305, 499, 521, 680, 776, 800, 1869, 2038, 2163
TaqII	GACCGA	1 cut(s)	1099
TatI	WGTACW	2 cut(s)	1327, 1570
TauI	GCSGC	1 cut(s)	375
Tru1I	TTAA	5 cut(s)	356, 983, 1752, 2124, 2382
Tru9I	TTAA	5 cut(s)	356, 983, 1752, 2124, 2382
TscAI	CASTG	6 cut(s)	343, 955, 1125, 1240, 1681, 2202
TseFI	GTSAC	6 cut(s)	338, 362, 394, 458, 944, 1942
TseI	GCWGC	5 cut(s)	953, 998, 1367, 2147, 2228
Tsp45I	GTSAC	6 cut(s)	338, 362, 394, 458, 944, 1942
TspGWI	ACGGA	1 cut(s)	1598
TspRI	CASTG	6 cut(s)	343, 955, 1125, 1240, 1681, 2202
Tth111I	GACNNNGTC	2 cut(s)	253, 344
Van91I	CCANNNNNTGG	1 cut(s)	911
Vha464I	CTTAAG	1 cut(s)	2381
VpaK11BI	GGWCC	2 cut(s)	249, 261
XapI	RAATTY	9 cut(s)	104, 494, 526, 616, 716, 778, 1282, 1913, 2312
XbaI	TCTAGA	1 cut(s)	1874
XmnI	GAANNNNTTC	1 cut(s)	850
XspI	CTAG	4 cut(s)	1224, 1545, 1875, 1991
ZraI	GACGTC	1 cut(s)	12

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.