Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010499

Physical Location & Seq

Genomic Coordinates Reverse (-)

22743273 .. 22747843

Gene Structure 4571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G186500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGAAAACGACGTCATTTTCGACTACGTTCATGCCCGTTAGACTCTTACCCCAACTCCGACTCCTCAGCACTTCTCTTCCGGCGACCCATTTCCCACCCATGAAGTTCGCGCCTACCCTTTCGTCCTCTCGGGCCGTGCCCATTTTGTCTCGGGTCTTCCCATTGAGGCTGAGGTACATGGGCTTAGGTTTTCGTCGTTCGTTGCAGACTGAGCGGGCATTCTCGACTCGTGCCTTCCGAGGCCCCAGAACCGGGTCGGGCTCCGAGTTGCCACGTGGGTATGAGAGAAGGGCTGGTGGAGCTTCGAAGAGCCTGATAGAGGACGAGGCTGAGCTTAGTGACTGGGTCAGCGAGTTGAGGAGTGACTCGCCCCGAGGACGAGAGGACGAATTGGAGGGTCGTAGAGGTAGGGTTAGAGAGAGGGGTACTGACAGAGAGTCTTATCCGATTAAAAAGAGCAGGAGAGAGAGTGACTCGGGCGATTTTGGTGAGTCTAGAAGGCGAGATTTTCGGTCCCCAAATCAGTCATTTACGAGAAATGGAGGTATAAGTAAGCGGTTCGATAATAAATCTGAGGGCGATAAGAAAGATAGACCATTTCCACCCAGAAACAATCGCGGGAACTCAAATTCAAGTGGCGAGTTTGGTGATTCGAGCAGGCGAAGATTTCCTAACCCAAATGAATATTTTTCGAGAAATTCAGGGATAAGTAAGCGGTTTGATAACAAATTTCAGAGTGATGATGATAAGGAAGACGGGTTGTTTCCGCGCAGAAATAATCGCGGGAATTCAAATTTGAAAGCGGATTCATTTACTAGGAATGGAGGTGTCGAGGGTCTAAGAAGCGGTGGAAGAGGGACTGGTAAAACATTGCGTGTGATGGATGATACTGAAGAGGAGGAGGAAAAACCGACCGGTGTTAGGATTGAGGATTTTCTTAGTGAGGAAGAGAGTGATACTGCTATTTCTGATGATGATGGCTATGGAGTATTAAGAGAAAAAAGTGCAACTTCTTTGTTTGGTTCGGATAATGAAGTGAGCGTAAAGGTTTTGCCGAAAAGTTCACCTGGAAGCTCTGACTCTTATTTGAGTGAATCTCGGTTTGATCAATGTTCTGTCTCTCCACTGTCCTTGAAAGGAATCAAGGATGCAGGATATGAAAAAATGACTGTAGTACAGGAGGCTACTCTTCCAGTAATACTCAAAGGTAAGGATGTTCTGGCCAAGGCTAAAACAGGGACTGGAAAAACTGTGGCGTTCTTGCTTCCATCAATTGAAGTTGTTGTAAAATCACCTCCTATTACCCGTGATCAAAAGCGACCCCCAATTCTGGTACTTGTAATATGCCCAACTCGAGAGCTGGCAAGTCAAGCTTCTGCAGAAGCCAATAAGTTATTGAAGTATCATCCTTCTATTGGCGTTCAAGTTGTGATTGGAGGTACAAGACTTGCTTTAGAACAGAAACGCATACAAGCAAACCCTTGCCAGATTCTTGTAGCTACACCTGGAAGGCTCAAAGATCACATTGAGAATACCGCAGGTTTCGCAACTAGGCTGATGGGTGTCAAAGTCCTTGTACTTGACGAAGCTGATCATTTGCTGGATATGGGATTCCGTAAAGACATTGAAAGGATTATTTCAAATGTCCCCAAACAACGGCAGACACTTCTGTTTTCTGCCACAGTTCCAGAAGAGGTCCGTCAAATATGTCACATTGCTTTAAAAAGAGATCATGAGTATATCAATACAGTTCAAGAAGGCAGTGAAGAGACGCATGCACAGGTCAGACAGACGCATTTAGTCACTCCATTGGACAAGCATTTTTCCCAAGTATATGCTCTTCTTAAAGAGCATATTGCAGATGATGTTGAATATAAGGTTCTTGTATTCTGCACTACTGCTATGGTCACACGATTGGTTGCAGACCTTCTTGGTGAGCTGAACTTGAACGTCAGGGAGATCCATTCTAGGAAGCCACAGAGTTATAGAACCCGAGTTTCTGATGAATTTCGGAAATCAAAGGGTCTTATTCTTGTAACTTCTGATGTATCTGCACGTGGGGTCGATTATCCAGATGTTACCCTAGTCATACAGGTGGGCGTGCCAGCTGATAGACAACAGTATATACACCGACTTGGTAGAACCGGTCGTAAAGGCAAAGAAGGGCAAGGAATATTGTTACTGGCTCCTTGGGAGGAATTCTTCTTGTCCACTATTAAGGATTTGCCAATAACCAAGGGTTCCGTACCTTCAGTTGATCCAGACACTACGAAGAAGGTGGAACGAGCGCTATCCAAAGTGGAGATGAAGAACAAAGAGGCAGCATATCAAGCGTGGCTTGGGTATTACAATTCGAATAAGAAAGTGGGGCGCGATAAGCATAGGCTTGTGGAGCTTGCTAACGAGTTTAGCCGAAGCATGGGGCTGGATAATCCTCCAGCCATTCCCAAGCTTGTTCTTGGCAAGATGGGGCTTAAGAATGTCCCTGGATTGCGTTCCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

835

Amino Acids

93.21

Weight (kDa)

9.61

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010499)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63630 AT5G63630
fragaria_vesca	FvH4_7g16280
malus_domestica	MD01G1079300.v1.1 MD07G1148200.v1.1
prunus_persica	Prupe.2G186500_v2.0.a1
pyrus_communis	pycom01g10760 pycom07g14720
rosa_chinensis	RchiOBHm_Chr1g0359291
rosa_laevigata	RLG00000027883
rosa_multiflora	Rmu_co8196408.1_g000001 Rmu_ssc0000135.1_g000038
rosa_roxburghii	Rroxscaffold_4G00297140 Rroxscaffold_5G00348520
rosa_rugosa	Rorug01G0269200
rosa_samantha	Rh1AG283200 Rh1BG249400 Rh1CG267300 Rh1DG278300 Rh2AG248100
rosa_wichuraiana	Rw1G025140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	14
Acc36I	ACCTGC	1 cut(s)	1529
AccBSI	CCGCTC	1 cut(s)	214
AccII	CGCG	5 cut(s)	110, 618, 769, 783, 2373
AciI	CCGC	9 cut(s)	214, 556, 618, 715, 767, 783, 803, 846, 1536
AclWI	GGATC	2 cut(s)	1954, 2252
AcoI	YGGCCR	1 cut(s)	1221
AcsI	RAATTY	7 cut(s)	628, 697, 728, 787, 793, 2006, 2198
AcuI	CTGAAG	2 cut(s)	912, 2235
AcvI	CACGTG	2 cut(s)	275, 2057
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	7 cut(s)	176, 427, 1176, 1335, 1441, 1578, 2247
AfeI	AGCGCT	1 cut(s)	2289
AfiI	CCNNNNNNNGG	8 cut(s)	251, 252, 319, 921, 1330, 1415, 1656, 2419
AflII	CTTAAG	1 cut(s)	2474
AgeI	ACCGGT	2 cut(s)	914, 2144
AhdI	GACNNNNNGTC	1 cut(s)	436
AjnI	CCWGG	3 cut(s)	1066, 1504, 2485
Alw26I	GTCTC	3 cut(s)	153, 1123, 1763
AlwI	GGATC	2 cut(s)	1954, 2252
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
Aor51HI	AGCGCT	1 cut(s)	2289
AoxI	GGCC	3 cut(s)	132, 241, 1221
ApeKI	GCWGC	1 cut(s)	2321
ApoI	RAATTY	7 cut(s)	628, 697, 728, 787, 793, 2006, 2198
ArsI	GACNNNNNNTTYG	1 cut(s)	33
AsiGI	ACCGGT	2 cut(s)	914, 2144
AspLEI	GCGC	4 cut(s)	112, 771, 2290, 2373
AspS9I	GGNCC	4 cut(s)	132, 242, 513, 1696
AsuC2I	CCSGG	1 cut(s)	253
AsuHPI	GGTGA	5 cut(s)	500, 659, 1056, 1284, 1946
AsuII	TTCGAA	2 cut(s)	305, 2354
AvaI	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
AvaII	GGWCC	2 cut(s)	513, 1696
BaeGI	GKGCMC	1 cut(s)	141
BalI	TGGCCA	1 cut(s)	1223
BanII	GRGCYC	1 cut(s)	263
BarI	GAAGNNNNNNTAC	2 cut(s)	1824, 1856
BauI	CACGAG	1 cut(s)	228
BbrPI	CACGTG	2 cut(s)	275, 2057
BbsI	GAAGAC	2 cut(s)	148, 759
BbvCI	CCTCAGC	2 cut(s)	65, 170
BbvI	GCAGC	1 cut(s)	2333
BccI	CCATC	5 cut(s)	874, 971, 1276, 1552, 2461
BceAI	ACGGC	2 cut(s)	119, 1673
BciT130I	CCWGG	3 cut(s)	1068, 1506, 2487
BclI	TGATCA	3 cut(s)	1105, 1309, 1591
BcnI	CCSGG	1 cut(s)	253
BcoDI	GTCTC	3 cut(s)	153, 1123, 1763
BfaI	CTAG	5 cut(s)	495, 816, 1551, 1968, 2084
BfmI	CTRYAG	2 cut(s)	1170, 1377
BfoI	RGCGCY	1 cut(s)	2291
BfrI	CTTAAG	1 cut(s)	2474
BfuAI	ACCTGC	1 cut(s)	1529
BisI	GCNGC	1 cut(s)	2322
BlpI	GCTNAGC	1 cut(s)	330
BlsI	GCNGC	1 cut(s)	2323
Bme1390I	CCNGG	4 cut(s)	253, 1068, 1506, 2487
Bme18I	GGWCC	2 cut(s)	513, 1696
BmeRI	GACNNNNNGTC	1 cut(s)	436
BmeT110I	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
BmgT120I	GGNCC	4 cut(s)	132, 242, 513, 1696
BmiI	GGNNCC	5 cut(s)	244, 262, 515, 2187, 2242
BmrFI	CCNGG	4 cut(s)	253, 1068, 1506, 2487
BmrI	ACTGGG	1 cut(s)	352
BmsI	GCATC	1 cut(s)	1138
BmuI	ACTGGG	1 cut(s)	352
BpiI	GAAGAC	2 cut(s)	148, 759
BplI	GAGNNNNNCTC	4 cut(s)	458, 490, 1081, 1113
BpmI	CTGGAG	1 cut(s)	2421
Bpu10I	CCTNAGC	3 cut(s)	65, 170, 184
Bpu1102I	GCTNAGC	1 cut(s)	330
Bpu14I	TTCGAA	2 cut(s)	305, 2354
BpuMI	CCSGG	1 cut(s)	253
BsaAI	YACGTR	2 cut(s)	275, 2057
BsaHI	GRCGYC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	238, 373, 1224, 2189, 2235, 2485
BsaWI	WCCGGW	2 cut(s)	914, 2144
BsaXI	ACNNNNNCTCC	6 cut(s)	39, 45, 69, 75, 454, 484
Bsc4I	CCNNNNNNNGG	8 cut(s)	251, 252, 319, 921, 1330, 1415, 1656, 2419
Bse118I	RCCGGY	2 cut(s)	914, 2144
Bse1I	ACTGG	5 cut(s)	347, 865, 1193, 1246, 2187
Bse3DI	GCAATG	2 cut(s)	869, 1713
BseBI	CCWGG	3 cut(s)	1068, 1506, 2487
BseDI	CCNNGG	6 cut(s)	238, 373, 1224, 2189, 2235, 2485
BseGI	GGATG	4 cut(s)	889, 1153, 1219, 1405
BseLI	CCNNNNNNNGG	8 cut(s)	251, 252, 319, 921, 1330, 1415, 1656, 2419
BseMI	GCAATG	2 cut(s)	869, 1713
BseMII	CTCAG	5 cut(s)	79, 161, 201, 321, 564
BseNI	ACTGG	5 cut(s)	347, 865, 1193, 1246, 2187
BseRI	GAGGAG	4 cut(s)	53, 373, 911, 914
BseSI	GKGCMC	1 cut(s)	141
BseXI	GCAGC	1 cut(s)	2333
BsgI	GTGCAG	2 cut(s)	1876, 2037
Bsh1236I	CGCG	5 cut(s)	110, 618, 769, 783, 2373
Bsh1285I	CGRYCG	2 cut(s)	915, 2149
BshFI	GGCC	3 cut(s)	134, 243, 1223
BshTI	ACCGGT	2 cut(s)	914, 2144
BsiEI	CGRYCG	2 cut(s)	915, 2149
BsiHKCI	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
BsiSI	CCGG	4 cut(s)	80, 252, 915, 2145
BslFI	GGGAC	5 cut(s)	499, 871, 1252, 1631, 2468
BslI	CCNNNNNNNGG	8 cut(s)	251, 252, 319, 921, 1330, 1415, 1656, 2419
BsmAI	GTCTC	3 cut(s)	153, 1123, 1763
BsmBI	CGTCTC	1 cut(s)	1763
BsmFI	GGGAC	5 cut(s)	499, 871, 1252, 1631, 2468
BsmI	GAATGC	1 cut(s)	218
BsnI	GGCC	3 cut(s)	134, 243, 1223
BsoBI	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
Bsp119I	TTCGAA	2 cut(s)	305, 2354
Bsp1286I	GDGCHC	2 cut(s)	141, 263
Bsp143I	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
Bsp1720I	GCTNAGC	1 cut(s)	330
BspACI	CCGC	9 cut(s)	214, 556, 618, 715, 767, 783, 803, 846, 1536
BspANI	GGCC	3 cut(s)	134, 243, 1223
BspCNI	CTCAG	5 cut(s)	78, 162, 202, 322, 565
BspFNI	CGCG	5 cut(s)	110, 618, 769, 783, 2373
BspHI	TCATGA	1 cut(s)	1732
BspLI	GGNNCC	5 cut(s)	244, 262, 515, 2187, 2242
BspMAI	CTGCAG	1 cut(s)	1381
BspMI	ACCTGC	1 cut(s)	1529
BspPI	GGATC	2 cut(s)	1954, 2252
BspQI	GCTCTTC	2 cut(s)	302, 1845
BspT104I	TTCGAA	2 cut(s)	305, 2354
BspTI	CTTAAG	1 cut(s)	2474
BsrBI	CCGCTC	1 cut(s)	214
BsrDI	GCAATG	2 cut(s)	869, 1713
BsrFI	RCCGGY	2 cut(s)	914, 2144
BsrI	ACTGG	5 cut(s)	347, 865, 1193, 1246, 2187
BssAI	RCCGGY	2 cut(s)	914, 2144
BssECI	CCNNGG	6 cut(s)	238, 373, 1224, 2189, 2235, 2485
BssMI	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	1 cut(s)	228
BssT1I	CCWWGG	3 cut(s)	1224, 2189, 2235
Bst2BI	CACGAG	1 cut(s)	228
Bst2UI	CCWGG	3 cut(s)	1068, 1506, 2487
Bst4CI	ACNGT	6 cut(s)	1128, 1171, 1252, 1684, 1750, 2121
Bst6I	CTCTTC	9 cut(s)	81, 302, 847, 888, 942, 1194, 1686, 1761, 1845
BstACI	GRCGYC	1 cut(s)	11
BstAFI	CTTAAG	1 cut(s)	2474
BstBAI	YACGTR	2 cut(s)	275, 2057
BstBI	TTCGAA	2 cut(s)	305, 2354
BstC8I	GCNNGC	7 cut(s)	216, 659, 1362, 1776, 2102, 2106, 2397
BstDEI	CTNAG	9 cut(s)	65, 170, 184, 210, 330, 335, 573, 839, 938
BstENI	CCTNNNNNAGG	1 cut(s)	317
BstF5I	GGATG	4 cut(s)	889, 1153, 1219, 1405
BstFNI	CGCG	5 cut(s)	110, 618, 769, 783, 2373
BstH2I	RGCGCY	1 cut(s)	2291
BstHHI	GCGC	4 cut(s)	112, 771, 2290, 2373
BstKTI	GATC	7 cut(s)	1108, 1312, 1522, 1594, 1732, 1962, 2260
BstMAI	GTCTC	3 cut(s)	153, 1123, 1763
BstMBI	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
BstMCI	CGRYCG	2 cut(s)	915, 2149
BstMWI	GCNNNNNNNGC	7 cut(s)	211, 299, 1370, 1544, 2330, 2377, 2392
BstNI	CCWGG	3 cut(s)	1068, 1506, 2487
BstNSI	RCATGY	1 cut(s)	1778
BstSCI	CCNGG	4 cut(s)	251, 1066, 1504, 2485
BstSFI	CTRYAG	2 cut(s)	1170, 1377
BstSLI	GKGCMC	1 cut(s)	141
BstUI	CGCG	5 cut(s)	110, 618, 769, 783, 2373
BstV1I	GCAGC	1 cut(s)	2333
BstV2I	GAAGAC	2 cut(s)	148, 759
BstX2I	RGATCY	1 cut(s)	1959
BstYI	RGATCY	1 cut(s)	1959
BsuRI	GGCC	3 cut(s)	134, 243, 1223
BtsCI	GGATG	4 cut(s)	889, 1153, 1219, 1405
BtsI	GCAGTG	1 cut(s)	1768
BtsIMutI	CAGTG	2 cut(s)	1124, 1768
BveI	ACCTGC	1 cut(s)	1529
Cac8I	GCNNGC	7 cut(s)	216, 659, 1362, 1776, 2102, 2106, 2397
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1732
CfoI	GCGC	4 cut(s)	112, 771, 2290, 2373
Cfr10I	RCCGGY	2 cut(s)	914, 2144
Cfr13I	GGNCC	4 cut(s)	132, 242, 513, 1696
CseI	GACGC	2 cut(s)	1780, 1801
Csp6I	GTAC	7 cut(s)	175, 426, 1175, 1334, 1440, 1577, 2246
CspAI	ACCGGT	2 cut(s)	914, 2144
CspCI	CAANNNNNGTGG	2 cut(s)	1113, 1148
CviAII	CATG	6 cut(s)	31, 100, 178, 1733, 1775, 2419
CviQI	GTAC	7 cut(s)	175, 426, 1175, 1334, 1440, 1577, 2246
DdeI	CTNAG	9 cut(s)	65, 170, 184, 210, 330, 335, 573, 839, 938
DpnI	GATC	7 cut(s)	1107, 1311, 1521, 1593, 1731, 1961, 2259
DpnII	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
DraI	TTTAAA	1 cut(s)	1722
DriI	GACNNNNNGTC	1 cut(s)	436
EaeI	YGGCCR	1 cut(s)	1221
Eam1104I	CTCTTC	9 cut(s)	81, 302, 847, 888, 942, 1194, 1686, 1761, 1845
Eam1105I	GACNNNNNGTC	1 cut(s)	436
EarI	CTCTTC	9 cut(s)	81, 302, 847, 888, 942, 1194, 1686, 1761, 1845
Eco130I	CCWWGG	3 cut(s)	1224, 2189, 2235
Eco24I	GRGCYC	1 cut(s)	263
Eco47I	GGWCC	2 cut(s)	513, 1696
Eco47III	AGCGCT	1 cut(s)	2289
Eco57I	CTGAAG	2 cut(s)	912, 2235
Eco72I	CACGTG	2 cut(s)	275, 2057
Eco88I	CYCGRG	6 cut(s)	129, 150, 372, 475, 1353, 1992
EcoNI	CCTNNNNNAGG	1 cut(s)	317
EcoO109I	RGGNCCY	1 cut(s)	242
EcoRI	GAATTC	2 cut(s)	787, 2198
EcoRII	CCWGG	3 cut(s)	1066, 1504, 2485
EcoT14I	CCWWGG	3 cut(s)	1224, 2189, 2235
EcoT38I	GRGCYC	1 cut(s)	263
ErhI	CCWWGG	3 cut(s)	1224, 2189, 2235
Esp3I	CGTCTC	1 cut(s)	1763
FaeI	CATG	6 cut(s)	34, 103, 181, 1736, 1778, 2422
FalI	AAGNNNNNCTT	8 cut(s)	994, 1026, 1357, 1389, 1435, 1467, 2322, 2354
FaqI	GGGAC	5 cut(s)	499, 871, 1252, 1631, 2468
FatI	CATG	6 cut(s)	30, 99, 177, 1732, 1774, 2418
FauI	CCCGC	3 cut(s)	207, 611, 776
FbaI	TGATCA	3 cut(s)	1105, 1309, 1591
Fnu4HI	GCNGC	1 cut(s)	2322
FokI	GGATG	4 cut(s)	896, 1160, 1226, 1392
FriOI	GRGCYC	1 cut(s)	263
Fsp4HI	GCNGC	1 cut(s)	2322
FspBI	CTAG	5 cut(s)	495, 816, 1551, 1968, 2084
GlaI	GCGC	4 cut(s)	111, 770, 2289, 2372
GluI	GCNGC	1 cut(s)	2322
GsuI	CTGGAG	1 cut(s)	2421
HaeII	RGCGCY	1 cut(s)	2291
HaeIII	GGCC	3 cut(s)	134, 243, 1223
HapII	CCGG	4 cut(s)	80, 252, 915, 2145
HgaI	GACGC	2 cut(s)	1780, 1801
HhaI	GCGC	4 cut(s)	112, 771, 2290, 2373
Hin1I	GRCGYC	1 cut(s)	11
Hin1II	CATG	6 cut(s)	34, 103, 181, 1736, 1778, 2422
Hin6I	GCGC	4 cut(s)	110, 769, 2288, 2371
HinP1I	GCGC	4 cut(s)	110, 769, 2288, 2371
HindIII	AAGCTT	2 cut(s)	1371, 2450
HpaII	CCGG	4 cut(s)	80, 252, 915, 2145
HphI	GGTGA	5 cut(s)	500, 659, 1056, 1284, 1946
Hpy166II	GTNNAC	2 cut(s)	1064, 2211
Hpy188III	TCNNGA	9 cut(s)	223, 495, 693, 1355, 1688, 1733, 1754, 2072, 2261
Hpy8I	GTNNAC	2 cut(s)	1064, 2211
Hpy99I	CGWCG	2 cut(s)	13, 198
HpyCH4III	ACNGT	6 cut(s)	1128, 1171, 1252, 1684, 1750, 2121
HpyCH4IV	ACGT	5 cut(s)	11, 26, 274, 1950, 2056
HpyCH4V	TGCA	9 cut(s)	205, 1007, 1151, 1379, 1778, 1859, 1893, 1922, 2054
HpyF10VI	GCNNNNNNNGC	7 cut(s)	211, 299, 1370, 1544, 2330, 2377, 2392
HpyF3I	CTNAG	9 cut(s)	65, 170, 184, 210, 330, 335, 573, 839, 938
HpySE526I	ACGT	5 cut(s)	11, 26, 274, 1950, 2056
Hsp92I	GRCGYC	1 cut(s)	11
Hsp92II	CATG	6 cut(s)	34, 103, 181, 1736, 1778, 2422
HspAI	GCGC	4 cut(s)	110, 769, 2288, 2371
Ksp22I	TGATCA	3 cut(s)	1105, 1309, 1591
Kzo9I	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
LguI	GCTCTTC	2 cut(s)	302, 1845
LmnI	GCTCC	4 cut(s)	266, 299, 2191, 2392
Lsp1109I	GCAGC	1 cut(s)	2333
LweI	GCATC	1 cut(s)	1138
MaeI	CTAG	5 cut(s)	495, 816, 1551, 1968, 2084
MaeII	ACGT	5 cut(s)	11, 26, 274, 1950, 2056
MaeIII	GTNAC	9 cut(s)	338, 362, 470, 1709, 1801, 1906, 2035, 2077, 2178
MalI	GATC	7 cut(s)	1107, 1311, 1521, 1593, 1731, 1961, 2259
MbiI	CCGCTC	1 cut(s)	214
MboI	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
MfeI	CAATTG	1 cut(s)	1272
MflI	RGATCY	1 cut(s)	1959
MhlI	GDGCHC	2 cut(s)	141, 263
MlsI	TGGCCA	1 cut(s)	1223
MluNI	TGGCCA	1 cut(s)	1223
MlyI	GAGTC	8 cut(s)	36, 54, 220, 359, 446, 467, 500, 1073
MmeI	TCCRAC	1 cut(s)	82
Mox20I	TGGCCA	1 cut(s)	1223
MscI	TGGCCA	1 cut(s)	1223
MseI	TTAA	6 cut(s)	450, 992, 1721, 1845, 2217, 2475
MslI	CAYNNNNRTG	1 cut(s)	2093
Msp20I	TGGCCA	1 cut(s)	1223
MspA1I	CMGCKG	1 cut(s)	2108
MspCI	CTTAAG	1 cut(s)	2474
MspI	CCGG	4 cut(s)	80, 252, 915, 2145
MspR9I	CCNGG	4 cut(s)	253, 1068, 1506, 2487
MunI	CAATTG	1 cut(s)	1272
Mva1269I	GAATGC	1 cut(s)	218
MvaI	CCWGG	3 cut(s)	1068, 1506, 2487
MvnI	CGCG	5 cut(s)	110, 618, 769, 783, 2373
MwoI	GCNNNNNNNGC	7 cut(s)	211, 299, 1370, 1544, 2330, 2377, 2392
NciI	CCSGG	1 cut(s)	253
NdeII	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
NlaIII	CATG	6 cut(s)	34, 103, 181, 1736, 1778, 2422
NlaIV	GGNNCC	5 cut(s)	244, 262, 515, 2187, 2242
NmuCI	GTSAC	6 cut(s)	338, 362, 470, 1709, 1801, 1906
NspI	RCATGY	1 cut(s)	1778
NspV	TTCGAA	2 cut(s)	305, 2354
PaeI	GCATGC	1 cut(s)	1778
PaeR7I	CTCGAG	1 cut(s)	1353
PagI	TCATGA	1 cut(s)	1732
PciSI	GCTCTTC	2 cut(s)	302, 1845
PcsI	WCGNNNNNNNCGW	2 cut(s)	17, 235
PctI	GAATGC	1 cut(s)	218
PfeI	GAWTC	6 cut(s)	650, 806, 1094, 1140, 1489, 1611
PflFI	GACNNNGTC	1 cut(s)	344
PinAI	ACCGGT	2 cut(s)	914, 2144
PkrI	GCNGC	1 cut(s)	2323
PleI	GAGTC	8 cut(s)	36, 54, 220, 359, 445, 467, 499, 1073
PmaCI	CACGTG	2 cut(s)	275, 2057
PmlI	CACGTG	2 cut(s)	275, 2057
PpsI	GAGTC	8 cut(s)	36, 54, 220, 359, 445, 467, 499, 1073
Ppu21I	YACGTR	2 cut(s)	275, 2057
Psp6I	CCWGG	3 cut(s)	1066, 1504, 2485
PspCI	CACGTG	2 cut(s)	275, 2057
PspGI	CCWGG	3 cut(s)	1066, 1504, 2485
PspN4I	GGNNCC	5 cut(s)	244, 262, 515, 2187, 2242
PspPI	GGNCC	4 cut(s)	132, 242, 513, 1696
PstI	CTGCAG	1 cut(s)	1381
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	1 cut(s)	1959
PsyI	GACNNNGTC	1 cut(s)	344
PvuII	CAGCTG	1 cut(s)	2108
RsaI	GTAC	7 cut(s)	176, 427, 1176, 1335, 1441, 1578, 2247
RsaNI	GTAC	7 cut(s)	175, 426, 1175, 1334, 1440, 1577, 2246
RseI	CAYNNNNRTG	1 cut(s)	2093
SapI	GCTCTTC	2 cut(s)	302, 1845
SaqAI	TTAA	6 cut(s)	450, 992, 1721, 1845, 2217, 2475
SatI	GCNGC	1 cut(s)	2322
Sau3AI	GATC	7 cut(s)	1105, 1309, 1519, 1591, 1729, 1959, 2257
Sau96I	GGNCC	4 cut(s)	132, 242, 513, 1696
SchI	GAGTC	8 cut(s)	36, 54, 220, 359, 446, 467, 500, 1073
ScrFI	CCNGG	4 cut(s)	253, 1068, 1506, 2487
SduI	GDGCHC	2 cut(s)	141, 263
SfaNI	GCATC	1 cut(s)	1138
SfcI	CTRYAG	2 cut(s)	1170, 1377
Sfr274I	CTCGAG	1 cut(s)	1353
SfuI	TTCGAA	2 cut(s)	305, 2354
SinI	GGWCC	2 cut(s)	513, 1696
SlaI	CTCGAG	1 cut(s)	1353
SmiMI	CAYNNNNRTG	1 cut(s)	2093
SmlI	CTYRAG	2 cut(s)	1353, 2474
SmoI	CTYRAG	2 cut(s)	1353, 2474
SphI	GCATGC	1 cut(s)	1778
SsiI	CCGC	9 cut(s)	214, 556, 618, 715, 767, 783, 803, 846, 1536
SspI	AATATT	2 cut(s)	686, 2175
SspMI	CTAG	5 cut(s)	495, 816, 1551, 1968, 2084
StyD4I	CCNGG	4 cut(s)	251, 1066, 1504, 2485
StyI	CCWWGG	3 cut(s)	1224, 2189, 2235
TaaI	ACNGT	6 cut(s)	1128, 1171, 1252, 1684, 1750, 2121
TaiI	ACGT	5 cut(s)	14, 29, 277, 1953, 2059
TaqII	GACCGA	1 cut(s)	501
TatI	WGTACW	2 cut(s)	1174, 1576
TfiI	GAWTC	6 cut(s)	650, 806, 1094, 1140, 1489, 1611
Tru1I	TTAA	6 cut(s)	450, 992, 1721, 1845, 2217, 2475
Tru9I	TTAA	6 cut(s)	450, 992, 1721, 1845, 2217, 2475
TscAI	CASTG	2 cut(s)	1131, 1768
TseFI	GTSAC	6 cut(s)	338, 362, 470, 1709, 1801, 1906
TseI	GCWGC	1 cut(s)	2321
Tsp45I	GTSAC	6 cut(s)	338, 362, 470, 1709, 1801, 1906
TspDTI	ATGAA	9 cut(s)	17, 19, 116, 696, 798, 1047, 1173, 2019, 2321
TspGWI	ACGGA	3 cut(s)	1604, 1688, 2233
TspRI	CASTG	2 cut(s)	1131, 1768
Tth111I	GACNNNGTC	1 cut(s)	344
Vha464I	CTTAAG	1 cut(s)	2474
VpaK11BI	GGWCC	2 cut(s)	513, 1696
XagI	CCTNNNNNAGG	1 cut(s)	317
XapI	RAATTY	7 cut(s)	628, 697, 728, 787, 793, 2006, 2198
XbaI	TCTAGA	1 cut(s)	494
XceI	RCATGY	1 cut(s)	1778
XhoI	CTCGAG	1 cut(s)	1353
XspI	CTAG	5 cut(s)	495, 816, 1551, 1968, 2084
ZraI	GACGTC	1 cut(s)	12

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.