Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007371

Physical Location & Seq

Genomic Coordinates Reverse (-)

26513262 .. 26515800

Gene Structure 2539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G66380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGCGGCGTCGTGGCAGTGGGAAAATGCCACCGCCGGCGCCGTCGCTGGATTCGCCACCGTAGCTGCTATGCACTCTCTTGATGTTGTTCGTACGAGATTCCAAGTCAACGACGGAAGAGGGTCAAGTCTGCCGACGTACAAGAACACTGCTCACGCTGTCTTCACCATTGCCCGTCTCGAGGGTTTGAGAGGGCTTTATGCAGGCTTCTTCCCTGCAGTTATCGGTTCTACTGTTTCCTGGGGCTTATACTTCTTTTTTTATGGAAGAGCCAAGCAGAGGTACGCTAGAGGCAGGGACGATGAGAAACTCAGCCCTGCTCTCCACCTTGCTTCTGCTGCTGAAGCAGGGGCCTTGGTCTGTTTATGCACAAATCCTATTTGGCTTGTCAAAACAAGGTTACAGCTTCAGACACCTCTTCATCAAACTCAACCATACTCAGGGCTATTAGATGCCTTTAGAACCATAGTGAAAGAGGAAGGACCCAGGGCGCTCTACAAGGGTATTGTCCCTGGTCTTGTACTGGTTTCTCATGGTGCTATTCAGTTCACAGCTTATGAGGAACTCCGTAAAATCATTGTGGATTTGAAAGAAAGGAGAAGAAAGTCCGAATCCACTGACAATCTATTGAACTCAGCAGATTATGCTGCACTTGGTGGCTCCTCCAAAGTCGCTGCAGTTCTTCTTACGTATCCATTTCAAGTTATACGAGCACGATTACAGCAACGACCTAGTACCAACGGAATCCCAAGATATATAGACAGCTTACATGTCATCAGAGAAACCGCGAGATATGAAGGTCTCAGGGGTTTCTACAGGGGACTAACGGCTAATCTTTTGAAAAATGTACCTGCGTCTTCCATCACATTCATCGTCTATGAAAACGTTCTGAAATTGCTAAAACAGCATCCAACAACAAAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006862 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015075 GO:0015215 GO:0015230 GO:0015605 GO:0015711 GO:0015748 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031967 GO:0031975 GO:0034220 GO:0035350 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051181 GO:0051184 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098656 GO:1901679

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

308

Amino Acids

34.12

Weight (kDa)

9.88

Isoelectric Point (pI)

30.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	7 - 96	1.7e-19	Mitochondrial carrier protein
Mito_carr	PF00153	103 - 194	1.7e-22	Mitochondrial carrier protein
Mito_carr	PF00153	212 - 303	1.4e-21	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66380
fragaria_vesca	FvH4_1g12470 FvH4_1g12470 FvH4_1g12470
malus_domestica	MD02G1138700.v1.1
prunus_persica	Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1
pyrus_communis	pycom02g10990
rosa_chinensis	RchiOBHm_Chr2g0100341
rosa_laevigata	RLG00000016967
rosa_multiflora	Rmu_co8306621.1_g000001 Rmu_sc0003340.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142310
rosa_rugosa	Rorug02G0087700 Rorug02G0087700 Rorug02G0087800 Rorug02G0087800 Rorug02G0087800
rosa_samantha	Rh2AG136900 Rh2CG142200 Rh2DG142300
rosa_wichuraiana	Rw2G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	859
AccB1I	GGYRCC	1 cut(s)	38
AccII	CGCG	1 cut(s)	788
AciI	CCGC	3 cut(s)	5, 33, 786
AclI	AACGTT	1 cut(s)	885
AcuI	CTGAAG	2 cut(s)	363, 392
AcyI	GRCGYC	2 cut(s)	8, 39
AdeI	CACNNNGTG	1 cut(s)	656
AfaI	GTAC	6 cut(s)	94, 140, 284, 522, 736, 849
AfiI	CCNNNNNNNGG	3 cut(s)	181, 279, 440
AflIII	ACRYGT	1 cut(s)	769
AgsI	TTSAA	4 cut(s)	589, 631, 701, 841
AjnI	CCWGG	3 cut(s)	239, 485, 511
AluBI	AGCT	4 cut(s)	65, 406, 554, 765
AluI	AGCT	4 cut(s)	65, 406, 554, 765
Alw21I	GWGCWC	1 cut(s)	715
Alw26I	GTCTC	2 cut(s)	182, 806
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	1 cut(s)	351
ApeKI	GCWGC	4 cut(s)	65, 338, 647, 674
Asp700I	GAANNNNTTC	1 cut(s)	885
AspLEI	GCGC	2 cut(s)	41, 493
AspS9I	GGNCC	2 cut(s)	351, 482
AsuHPI	GGTGA	1 cut(s)	157
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	1 cut(s)	482
BanI	GGYRCC	1 cut(s)	38
BbsI	GAAGAC	2 cut(s)	154, 849
Bbv12I	GWGCWC	1 cut(s)	715
BbvI	GCAGC	4 cut(s)	52, 325, 634, 661
BccI	CCATC	1 cut(s)	869
BceAI	ACGGC	2 cut(s)	26, 843
BciT130I	CCWGG	3 cut(s)	241, 487, 513
BciVI	GTATCC	1 cut(s)	702
BcoDI	GTCTC	2 cut(s)	182, 806
BfaI	CTAG	2 cut(s)	288, 732
BfmI	CTRYAG	3 cut(s)	216, 675, 814
BfoI	RGCGCY	2 cut(s)	42, 494
BfuAI	ACCTGC	1 cut(s)	859
BfuI	GTATCC	1 cut(s)	702
BisI	GCNGC	5 cut(s)	6, 66, 339, 648, 675
BlsI	GCNGC	5 cut(s)	7, 67, 340, 649, 676
Bme1390I	CCNGG	3 cut(s)	241, 487, 513
Bme18I	GGWCC	1 cut(s)	482
BmeT110I	CYCGRG	1 cut(s)	179
BmgT120I	GGNCC	2 cut(s)	351, 482
BmiI	GGNNCC	4 cut(s)	40, 352, 484, 661
BmrFI	CCNGG	3 cut(s)	241, 487, 513
BmsI	GCATC	2 cut(s)	442, 916
BpiI	GAAGAC	2 cut(s)	154, 849
BsaAI	YACGTR	1 cut(s)	690
BsaHI	GRCGYC	2 cut(s)	8, 39
BsaI	GGTCTC	1 cut(s)	806
BsaJI	CCNNGG	5 cut(s)	240, 354, 485, 486, 511
Bsc4I	CCNNNNNNNGG	3 cut(s)	181, 279, 440
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	1 cut(s)	528
Bse3DI	GCAATG	1 cut(s)	168
BseBI	CCWGG	3 cut(s)	241, 487, 513
BseDI	CCNNGG	5 cut(s)	240, 354, 485, 486, 511
BseGI	GGATG	1 cut(s)	907
BseLI	CCNNNNNNNGG	3 cut(s)	181, 279, 440
BseMI	GCAATG	1 cut(s)	168
BseMII	CTCAG	4 cut(s)	325, 453, 648, 817
BseNI	ACTGG	1 cut(s)	528
BseRI	GAGGAG	1 cut(s)	652
BseXI	GCAGC	4 cut(s)	52, 325, 634, 661
BsgI	GTGCAG	1 cut(s)	633
Bsh1236I	CGCG	1 cut(s)	788
BshFI	GGCC	1 cut(s)	353
BshNI	GGYRCC	1 cut(s)	38
BsiHKAI	GWGCWC	1 cut(s)	715
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	1 cut(s)	36
BsiWI	CGTACG	1 cut(s)	92
BslFI	GGGAC	3 cut(s)	311, 494, 834
BslI	CCNNNNNNNGG	3 cut(s)	181, 279, 440
BsmAI	GTCTC	2 cut(s)	182, 806
BsmBI	CGTCTC	1 cut(s)	182
BsmFI	GGGAC	3 cut(s)	311, 494, 834
BsnI	GGCC	1 cut(s)	353
Bso31I	GGTCTC	1 cut(s)	806
BsoBI	CYCGRG	1 cut(s)	179
Bsp1286I	GDGCHC	1 cut(s)	715
BspACI	CCGC	3 cut(s)	5, 33, 786
BspANI	GGCC	1 cut(s)	353
BspCNI	CTCAG	4 cut(s)	324, 452, 647, 816
BspFNI	CGCG	1 cut(s)	788
BspLI	GGNNCC	4 cut(s)	40, 352, 484, 661
BspMAI	CTGCAG	2 cut(s)	220, 679
BspMI	ACCTGC	1 cut(s)	859
BspQI	GCTCTTC	1 cut(s)	262
BspT107I	GGYRCC	1 cut(s)	38
BspTNI	GGTCTC	1 cut(s)	806
BsrDI	GCAATG	1 cut(s)	168
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	528
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	5 cut(s)	240, 354, 485, 486, 511
BssNI	GRCGYC	2 cut(s)	8, 39
BssT1I	CCWWGG	1 cut(s)	354
Bst2UI	CCWGG	3 cut(s)	241, 487, 513
Bst4CI	ACNGT	2 cut(s)	61, 235
Bst6I	CTCTTC	3 cut(s)	112, 262, 423
BstACI	GRCGYC	2 cut(s)	8, 39
BstAPI	GCANNNNNTGC	1 cut(s)	644
BstBAI	YACGTR	1 cut(s)	690
BstC8I	GCNNGC	2 cut(s)	37, 205
BstDEI	CTNAG	4 cut(s)	311, 439, 634, 803
BstF5I	GGATG	1 cut(s)	907
BstFNI	CGCG	1 cut(s)	788
BstH2I	RGCGCY	2 cut(s)	42, 494
BstHHI	GCGC	2 cut(s)	41, 493
BstMAI	GTCTC	2 cut(s)	182, 806
BstMWI	GCNNNNNNNGC	6 cut(s)	53, 62, 338, 344, 644, 904
BstNI	CCWGG	3 cut(s)	241, 487, 513
BstNSI	RCATGY	1 cut(s)	773
BstSCI	CCNGG	3 cut(s)	239, 485, 511
BstSFI	CTRYAG	3 cut(s)	216, 675, 814
BstSNI	TACGTA	1 cut(s)	690
BstUI	CGCG	1 cut(s)	788
BstV1I	GCAGC	4 cut(s)	52, 325, 634, 661
BstV2I	GAAGAC	2 cut(s)	154, 849
BsuI	GTATCC	1 cut(s)	702
BsuRI	GGCC	1 cut(s)	353
BtsCI	GGATG	1 cut(s)	907
BtsI	GCAGTG	2 cut(s)	23, 147
BtsIMutI	CAGTG	3 cut(s)	23, 147, 615
BveI	ACCTGC	1 cut(s)	859
Cac8I	GCNNGC	2 cut(s)	37, 205
CfoI	GCGC	2 cut(s)	41, 493
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	351, 482
CseI	GACGC	1 cut(s)	843
Csp6I	GTAC	6 cut(s)	93, 139, 283, 521, 735, 848
CviAII	CATG	2 cut(s)	533, 770
CviQI	GTAC	6 cut(s)	93, 139, 283, 521, 735, 848
DdeI	CTNAG	4 cut(s)	311, 439, 634, 803
DinI	GGCGCC	1 cut(s)	40
DraIII	CACNNNGTG	1 cut(s)	656
Eam1104I	CTCTTC	3 cut(s)	112, 262, 423
EarI	CTCTTC	3 cut(s)	112, 262, 423
Eco105I	TACGTA	1 cut(s)	690
Eco130I	CCWWGG	1 cut(s)	354
Eco31I	GGTCTC	1 cut(s)	806
Eco47I	GGWCC	1 cut(s)	482
Eco57I	CTGAAG	2 cut(s)	363, 392
Eco88I	CYCGRG	1 cut(s)	179
EcoO109I	RGGNCCY	2 cut(s)	351, 482
EcoRII	CCWGG	3 cut(s)	239, 485, 511
EcoT14I	CCWWGG	1 cut(s)	354
EgeI	GGCGCC	1 cut(s)	40
EheI	GGCGCC	1 cut(s)	40
ErhI	CCWWGG	1 cut(s)	354
Esp3I	CGTCTC	1 cut(s)	182
FaeI	CATG	2 cut(s)	536, 773
FaqI	GGGAC	3 cut(s)	311, 494, 834
FatI	CATG	2 cut(s)	532, 769
Fnu4HI	GCNGC	5 cut(s)	6, 66, 339, 648, 675
FokI	GGATG	1 cut(s)	894
Fsp4HI	GCNGC	5 cut(s)	6, 66, 339, 648, 675
FspBI	CTAG	2 cut(s)	288, 732
GlaI	GCGC	2 cut(s)	40, 492
GluI	GCNGC	5 cut(s)	6, 66, 339, 648, 675
HaeII	RGCGCY	2 cut(s)	42, 494
HaeIII	GGCC	1 cut(s)	353
HapII	CCGG	1 cut(s)	36
HgaI	GACGC	1 cut(s)	843
HhaI	GCGC	2 cut(s)	41, 493
Hin1I	GRCGYC	2 cut(s)	8, 39
Hin1II	CATG	2 cut(s)	536, 773
Hin6I	GCGC	2 cut(s)	39, 491
HinP1I	GCGC	2 cut(s)	39, 491
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HinfI	GANTC	4 cut(s)	51, 99, 611, 744
HpaII	CCGG	1 cut(s)	36
HphI	GGTGA	1 cut(s)	157
Hpy166II	GTNNAC	2 cut(s)	109, 549
Hpy188I	TCNGA	4 cut(s)	411, 610, 779, 891
Hpy188III	TCNNGA	2 cut(s)	80, 179
Hpy8I	GTNNAC	2 cut(s)	109, 549
Hpy99I	CGWCG	4 cut(s)	13, 47, 116, 139
HpyAV	CCTTC	2 cut(s)	473, 791
HpyCH4III	ACNGT	2 cut(s)	61, 235
HpyCH4IV	ACGT	3 cut(s)	137, 689, 885
HpyCH4V	TGCA	6 cut(s)	73, 203, 218, 369, 650, 677
HpyF10VI	GCNNNNNNNGC	6 cut(s)	53, 62, 338, 344, 644, 904
HpyF3I	CTNAG	4 cut(s)	311, 439, 634, 803
HpySE526I	ACGT	3 cut(s)	137, 689, 885
Hsp92I	GRCGYC	2 cut(s)	8, 39
Hsp92II	CATG	2 cut(s)	536, 773
HspAI	GCGC	2 cut(s)	39, 491
KasI	GGCGCC	1 cut(s)	38
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
LguI	GCTCTTC	1 cut(s)	262
LmnI	GCTCC	1 cut(s)	665
Lsp1109I	GCAGC	4 cut(s)	52, 325, 634, 661
LweI	GCATC	2 cut(s)	442, 916
MaeI	CTAG	2 cut(s)	288, 732
MaeII	ACGT	3 cut(s)	137, 689, 885
MaeIII	GTNAC	1 cut(s)	399
MboII	GAAGA	8 cut(s)	129, 154, 202, 279, 410, 612, 674, 849
MhlI	GDGCHC	1 cut(s)	715
MluCI	AATT	1 cut(s)	893
Mly113I	GGCGCC	1 cut(s)	39
MnlI	CCTC	9 cut(s)	113, 175, 185, 273, 284, 426, 469, 553, 673
MreI	CGCCGGCG	1 cut(s)	35
MroNI	GCCGGC	1 cut(s)	35
MroXI	GAANNNNTTC	1 cut(s)	885
MspI	CCGG	1 cut(s)	36
MspR9I	CCNGG	3 cut(s)	241, 487, 513
MvaI	CCWGG	3 cut(s)	241, 487, 513
MvnI	CGCG	1 cut(s)	788
MwoI	GCNNNNNNNGC	6 cut(s)	53, 62, 338, 344, 644, 904
NaeI	GCCGGC	1 cut(s)	37
NarI	GGCGCC	1 cut(s)	39
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	2 cut(s)	536, 773
NlaIV	GGNNCC	4 cut(s)	40, 352, 484, 661
NspI	RCATGY	1 cut(s)	773
PaeR7I	CTCGAG	1 cut(s)	179
PasI	CCCWGGG	1 cut(s)	486
PciI	ACATGT	1 cut(s)	769
PciSI	GCTCTTC	1 cut(s)	262
PdiI	GCCGGC	1 cut(s)	37
PdmI	GAANNNNTTC	1 cut(s)	885
PfeI	GAWTC	4 cut(s)	51, 99, 611, 744
Pfl23II	CGTACG	1 cut(s)	92
PkrI	GCNGC	5 cut(s)	7, 67, 340, 649, 676
PluTI	GGCGCC	1 cut(s)	42
Ppu21I	YACGTR	1 cut(s)	690
PpuMI	RGGWCCY	1 cut(s)	482
PscI	ACATGT	1 cut(s)	769
Psp1406I	AACGTT	1 cut(s)	885
Psp5II	RGGWCCY	1 cut(s)	482
Psp6I	CCWGG	3 cut(s)	239, 485, 511
PspGI	CCWGG	3 cut(s)	239, 485, 511
PspLI	CGTACG	1 cut(s)	92
PspN4I	GGNNCC	4 cut(s)	40, 352, 484, 661
PspPI	GGNCC	2 cut(s)	351, 482
PspPPI	RGGWCCY	1 cut(s)	482
PstI	CTGCAG	2 cut(s)	220, 679
RsaI	GTAC	6 cut(s)	94, 140, 284, 522, 736, 849
RsaNI	GTAC	6 cut(s)	93, 139, 283, 521, 735, 848
SapI	GCTCTTC	1 cut(s)	262
SatI	GCNGC	5 cut(s)	6, 66, 339, 648, 675
Sau96I	GGNCC	2 cut(s)	351, 482
ScrFI	CCNGG	3 cut(s)	241, 487, 513
SduI	GDGCHC	1 cut(s)	715
SfaNI	GCATC	2 cut(s)	442, 916
SfcI	CTRYAG	3 cut(s)	216, 675, 814
SfoI	GGCGCC	1 cut(s)	40
Sfr274I	CTCGAG	1 cut(s)	179
SgrAI	CRCCGGYG	1 cut(s)	35
SinI	GGWCC	1 cut(s)	482
SlaI	CTCGAG	1 cut(s)	179
SmlI	CTYRAG	1 cut(s)	179
SmoI	CTYRAG	1 cut(s)	179
SnaBI	TACGTA	1 cut(s)	690
Sse9I	AATT	1 cut(s)	893
SsiI	CCGC	3 cut(s)	5, 33, 786
SspDI	GGCGCC	1 cut(s)	38
SspMI	CTAG	2 cut(s)	288, 732
StyD4I	CCNGG	3 cut(s)	239, 485, 511
StyI	CCWWGG	1 cut(s)	354
TaaI	ACNGT	2 cut(s)	61, 235
TaiI	ACGT	3 cut(s)	140, 692, 888
TaqI	TCGA	1 cut(s)	180
TasI	AATT	1 cut(s)	893
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	4 cut(s)	51, 99, 611, 744
TscAI	CASTG	3 cut(s)	23, 154, 622
TseI	GCWGC	4 cut(s)	65, 338, 647, 674
TspDTI	ATGAA	4 cut(s)	410, 810, 859, 894
TspGWI	ACGGA	3 cut(s)	129, 557, 756
TspRI	CASTG	3 cut(s)	23, 154, 622
VpaK11BI	GGWCC	1 cut(s)	482
XceI	RCATGY	1 cut(s)	773
XhoI	CTCGAG	1 cut(s)	179
XmnI	GAANNNNTTC	1 cut(s)	885
XspI	CTAG	2 cut(s)	288, 732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.