Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007371

Physical Location & Seq

Genomic Coordinates Forward (+)

16774865 .. 16779633

Gene Structure 4769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G162200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 936 bp

ATGTCGTCGGCGTCGCAGTGGCAGTGGGAAACTGCCACCGCCGGCGCCATCGCCGGGTTCGCCACTGTCGCGGCGATGCATCCTCTAGACGTTGTCCGTACGAGATTTCAAGTCCACGATGGTCGAGTCTCCAATCTTCCAACTTACAAGAACACGGCTCACGCCATTTTCACCATTGCTCGATTGGAGGGCTTGGGAGGACTCTATGCAGGCTTTTCTCCTGCTGTTCTTGGTTCCACTGTTTCATGGGGCTTATATTTCTTCTTCTATGGAAGAGCGAAACAAAGGTATTCTAAAAACAGGGATGAGCAGCTGAGCCCTGGTCTTCATCTCGCTTCTGCAGCAGAAGCTGGTGCTTTGGTTTCTTTGTGCACAAATCCTATTTGGCTTGTAAAAACAAGATTGCAGCTTCAGACTCCTCTTCATCAAACTCAACCATATTCTGGGTTTTATGATGCCTTAAGAACTATAGTGAGAGAGGAAGGGTGGGCTGCGCTTTATAAAGGTCTTCTTCCCAGTCTTTTTCTGCAGGTATCTCATGGTGCTATTCAATTCACAGCATATGAAGAACTCCGTAAAGTAGTTGTTGACTTCAAGTCTAAAAAAAGGAGAAGGCATTCTGGAAGTGCTGATTCAGTGTTGAATTCAGTTGACTATGCAGCTTTGGGGGCATCATCTAAAGTTGCTGCCATTCTTCTATCTTATCCATTCCAGGTGATGCGATCTCGATTGCAGCAACGACCTAGCAGTGAAGGAATTCCAAGATATATGGATAGCTGGCATGTGATAAGGGAAACTGTACGGTTTGAGGGCGTTAGAGGTTTCTACAAGGGAATCACCCCAAATCTTCTGAAAAATGTTCCTGCTGCTTCAATAACATTTATTGTATACGAAAATGTACTGAAATTTCTAAAATTTGCTAGAACGAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006862 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015075 GO:0015215 GO:0015230 GO:0015605 GO:0015711 GO:0015748 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031967 GO:0031975 GO:0034220 GO:0035350 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051181 GO:0051184 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098656 GO:1901679

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

312

Amino Acids

34.69

Weight (kDa)

9.93

Isoelectric Point (pI)

42.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66380
fragaria_vesca	FvH4_1g12470 FvH4_1g12470 FvH4_1g12470
malus_domestica	MD02G1138700.v1.1
prunus_persica	Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1 Prupe.7G162200_v2.0.a1
pyrus_communis	pycom02g10990
rosa_chinensis	RchiOBHm_Chr2g0100341
rosa_laevigata	RLG00000016967
rosa_multiflora	Rmu_co8306621.1_g000001 Rmu_sc0003340.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142310
rosa_rugosa	Rorug02G0087700 Rorug02G0087700 Rorug02G0087800 Rorug02G0087800 Rorug02G0087800
rosa_samantha	Rh2AG136900 Rh2CG142200 Rh2DG142300
rosa_wichuraiana	Rw2G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	501
Acc36I	ACCTGC	1 cut(s)	520
AccB1I	GGYRCC	1 cut(s)	44
AccB7I	CCANNNNNTGG	1 cut(s)	443
AccI	GTMKAC	1 cut(s)	888
AccII	CGCG	1 cut(s)	71
AciI	CCGC	2 cut(s)	39, 71
AcsI	RAATTY	4 cut(s)	643, 756, 905, 914
AcuI	CTGAAG	1 cut(s)	395
AcyI	GRCGYC	2 cut(s)	11, 45
AfaI	GTAC	3 cut(s)	100, 801, 900
AfiI	CCNNNNNNNGG	2 cut(s)	54, 443
AflII	CTTAAG	1 cut(s)	460
AgsI	TTSAA	5 cut(s)	110, 551, 595, 643, 873
AhdI	GACNNNNNGTC	1 cut(s)	595
AjnI	CCWGG	2 cut(s)	319, 711
AluBI	AGCT	5 cut(s)	313, 350, 409, 662, 777
AluI	AGCT	5 cut(s)	313, 350, 409, 662, 777
Alw21I	GWGCWC	1 cut(s)	374
Alw26I	GTCTC	1 cut(s)	133
Alw44I	GTGCAC	1 cut(s)	370
AlwNI	CAGNNNCTG	1 cut(s)	350
ApaLI	GTGCAC	1 cut(s)	370
ApeKI	GCWGC	8 cut(s)	310, 341, 406, 491, 659, 686, 733, 866
ApoI	RAATTY	4 cut(s)	643, 756, 905, 914
Asp700I	GAANNNNTTC	2 cut(s)	616, 756
AspLEI	GCGC	2 cut(s)	47, 496
AsuC2I	CCSGG	1 cut(s)	55
AsuHPI	GGTGA	3 cut(s)	163, 727, 829
BaeGI	GKGCMC	1 cut(s)	374
BanI	GGYRCC	1 cut(s)	44
BanII	GRGCYC	1 cut(s)	320
BbsI	GAAGAC	2 cut(s)	317, 500
Bbv12I	GWGCWC	1 cut(s)	374
BbvI	GCAGC	8 cut(s)	322, 353, 418, 478, 671, 673, 745, 853
BccI	CCATC	2 cut(s)	56, 113
BceAI	ACGGC	1 cut(s)	171
BciT130I	CCWGG	2 cut(s)	321, 713
BcnI	CCSGG	1 cut(s)	55
BcoDI	GTCTC	1 cut(s)	133
BfaI	CTAG	3 cut(s)	86, 744, 921
BfmI	CTRYAG	3 cut(s)	339, 468, 527
BfoI	RGCGCY	1 cut(s)	48
BfrI	CTTAAG	1 cut(s)	460
BfuAI	ACCTGC	1 cut(s)	520
BisI	GCNGC	9 cut(s)	72, 311, 342, 407, 492, 660, 687, 734, 867
BlpI	GCTNAGC	1 cut(s)	314
BlsI	GCNGC	9 cut(s)	73, 312, 343, 408, 493, 661, 688, 735, 868
Bme1390I	CCNGG	3 cut(s)	55, 321, 713
BmeRI	GACNNNNNGTC	1 cut(s)	595
BmiI	GGNNCC	2 cut(s)	46, 235
BmrFI	CCNGG	3 cut(s)	55, 321, 713
BmrI	ACTGGG	1 cut(s)	510
BmsI	GCATC	5 cut(s)	66, 88, 445, 680, 708
BmuI	ACTGGG	1 cut(s)	510
BpiI	GAAGAC	2 cut(s)	317, 500
Bpu1102I	GCTNAGC	1 cut(s)	314
BpuMI	CCSGG	1 cut(s)	55
BsaHI	GRCGYC	2 cut(s)	11, 45
BsaJI	CCNNGG	1 cut(s)	319
Bsc4I	CCNNNNNNNGG	2 cut(s)	54, 443
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	1 cut(s)	516
Bse3DI	GCAATG	1 cut(s)	174
BseBI	CCWGG	2 cut(s)	321, 713
BseDI	CCNNGG	1 cut(s)	319
BseGI	GGATG	2 cut(s)	79, 310
BseLI	CCNNNNNNNGG	2 cut(s)	54, 443
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	1 cut(s)	305
BseNI	ACTGG	1 cut(s)	516
BseRI	GAGGAG	1 cut(s)	408
BseSI	GKGCMC	1 cut(s)	374
BseXI	GCAGC	8 cut(s)	322, 353, 418, 478, 671, 673, 745, 853
Bsh1236I	CGCG	1 cut(s)	71
BshNI	GGYRCC	1 cut(s)	44
BsiHKAI	GWGCWC	1 cut(s)	374
BsiSI	CCGG	2 cut(s)	42, 54
BsiWI	CGTACG	1 cut(s)	98
BslI	CCNNNNNNNGG	2 cut(s)	54, 443
BsmAI	GTCTC	1 cut(s)	133
BsmI	GAATGC	1 cut(s)	616
Bsp1286I	GDGCHC	2 cut(s)	320, 374
Bsp143I	GATC	1 cut(s)	722
Bsp1720I	GCTNAGC	1 cut(s)	314
BspACI	CCGC	2 cut(s)	39, 71
BspCNI	CTCAG	1 cut(s)	306
BspFNI	CGCG	1 cut(s)	71
BspLI	GGNNCC	2 cut(s)	46, 235
BspMAI	CTGCAG	2 cut(s)	343, 531
BspMI	ACCTGC	1 cut(s)	520
BspQI	GCTCTTC	1 cut(s)	268
BspT107I	GGYRCC	1 cut(s)	44
BspTI	CTTAAG	1 cut(s)	460
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	1 cut(s)	41
BsrI	ACTGG	1 cut(s)	516
BssAI	RCCGGY	1 cut(s)	41
BssECI	CCNNGG	1 cut(s)	319
BssMI	GATC	1 cut(s)	722
BssNAI	GTATAC	1 cut(s)	889
BssNI	GRCGYC	2 cut(s)	11, 45
Bst1107I	GTATAC	1 cut(s)	889
Bst2UI	CCWGG	2 cut(s)	321, 713
Bst4CI	ACNGT	4 cut(s)	67, 241, 799, 804
Bst6I	CTCTTC	2 cut(s)	268, 426
BstACI	GRCGYC	2 cut(s)	11, 45
BstAFI	CTTAAG	1 cut(s)	460
BstC8I	GCNNGC	3 cut(s)	43, 211, 779
BstDEI	CTNAG	1 cut(s)	314
BstF5I	GGATG	2 cut(s)	79, 310
BstFNI	CGCG	1 cut(s)	71
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	2 cut(s)	47, 496
BstKTI	GATC	1 cut(s)	725
BstMAI	GTCTC	1 cut(s)	133
BstMBI	GATC	1 cut(s)	722
BstMWI	GCNNNNNNNGC	5 cut(s)	59, 68, 341, 347, 668
BstNI	CCWGG	2 cut(s)	321, 713
BstNSI	RCATGY	1 cut(s)	785
BstSCI	CCNGG	3 cut(s)	53, 319, 711
BstSFI	CTRYAG	3 cut(s)	339, 468, 527
BstSLI	GKGCMC	1 cut(s)	374
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	8 cut(s)	322, 353, 418, 478, 671, 673, 745, 853
BstV2I	GAAGAC	2 cut(s)	317, 500
BstZ17I	GTATAC	1 cut(s)	889
BtgZI	GCGATG	2 cut(s)	34, 89
BtsCI	GGATG	2 cut(s)	79, 310
BtsI	GCAGTG	3 cut(s)	23, 29, 754
BtsIMutI	CAGTG	6 cut(s)	23, 29, 63, 237, 642, 754
BveI	ACCTGC	1 cut(s)	520
Cac8I	GCNNGC	3 cut(s)	43, 211, 779
CaiI	CAGNNNCTG	1 cut(s)	350
CfoI	GCGC	2 cut(s)	47, 496
Cfr10I	RCCGGY	1 cut(s)	41
Csp6I	GTAC	3 cut(s)	99, 800, 899
CviAII	CATG	3 cut(s)	246, 539, 782
CviQI	GTAC	3 cut(s)	99, 800, 899
DdeI	CTNAG	1 cut(s)	314
DinI	GGCGCC	1 cut(s)	46
DpnI	GATC	1 cut(s)	724
DpnII	GATC	1 cut(s)	722
DriI	GACNNNNNGTC	1 cut(s)	595
Eam1104I	CTCTTC	2 cut(s)	268, 426
Eam1105I	GACNNNNNGTC	1 cut(s)	595
EarI	CTCTTC	2 cut(s)	268, 426
Eco24I	GRGCYC	1 cut(s)	320
Eco57I	CTGAAG	1 cut(s)	395
EcoRI	GAATTC	2 cut(s)	643, 756
EcoRII	CCWGG	2 cut(s)	319, 711
EcoT22I	ATGCAT	1 cut(s)	81
EcoT38I	GRGCYC	1 cut(s)	320
EgeI	GGCGCC	1 cut(s)	46
EheI	GGCGCC	1 cut(s)	46
FaeI	CATG	3 cut(s)	249, 542, 785
FalI	AAGNNNNNCTT	2 cut(s)	495, 527
FatI	CATG	3 cut(s)	245, 538, 781
FauNDI	CATATG	1 cut(s)	562
FblI	GTMKAC	1 cut(s)	888
Fnu4HI	GCNGC	9 cut(s)	72, 311, 342, 407, 492, 660, 687, 734, 867
FokI	GGATG	2 cut(s)	66, 317
FriOI	GRGCYC	1 cut(s)	320
Fsp4HI	GCNGC	9 cut(s)	72, 311, 342, 407, 492, 660, 687, 734, 867
FspBI	CTAG	3 cut(s)	86, 744, 921
GlaI	GCGC	2 cut(s)	46, 495
GluI	GCNGC	9 cut(s)	72, 311, 342, 407, 492, 660, 687, 734, 867
HaeII	RGCGCY	1 cut(s)	48
HapII	CCGG	2 cut(s)	42, 54
HhaI	GCGC	2 cut(s)	47, 496
Hin1I	GRCGYC	2 cut(s)	11, 45
Hin1II	CATG	3 cut(s)	249, 542, 785
Hin6I	GCGC	2 cut(s)	45, 494
HinP1I	GCGC	2 cut(s)	45, 494
HincII	GTYRAC	2 cut(s)	589, 652
HindII	GTYRAC	2 cut(s)	589, 652
HinfI	GANTC	5 cut(s)	126, 201, 415, 632, 834
HpaII	CCGG	2 cut(s)	42, 54
HphI	GGTGA	3 cut(s)	163, 727, 829
Hpy166II	GTNNAC	5 cut(s)	115, 372, 589, 652, 889
Hpy188I	TCNGA	2 cut(s)	414, 852
Hpy188III	TCNNGA	3 cut(s)	86, 621, 726
Hpy8I	GTNNAC	5 cut(s)	115, 372, 589, 652, 889
Hpy99I	CGWCG	2 cut(s)	10, 16
HpyAV	CCTTC	3 cut(s)	476, 606, 746
HpyCH4III	ACNGT	4 cut(s)	67, 241, 799, 804
HpyCH4IV	ACGT	1 cut(s)	90
HpyCH4V	TGCA	8 cut(s)	79, 209, 341, 372, 406, 529, 659, 733
HpyF10VI	GCNNNNNNNGC	5 cut(s)	59, 68, 341, 347, 668
HpyF3I	CTNAG	1 cut(s)	314
HpySE526I	ACGT	1 cut(s)	90
Hsp92I	GRCGYC	2 cut(s)	11, 45
Hsp92II	CATG	3 cut(s)	249, 542, 785
HspAI	GCGC	2 cut(s)	45, 494
KasI	GGCGCC	1 cut(s)	44
KroI	GCCGGC	1 cut(s)	41
KroNI	GCCGGC	1 cut(s)	43
Kzo9I	GATC	1 cut(s)	722
LguI	GCTCTTC	1 cut(s)	268
Lsp1109I	GCAGC	8 cut(s)	322, 353, 418, 478, 671, 673, 745, 853
LweI	GCATC	5 cut(s)	66, 88, 445, 680, 708
MaeI	CTAG	3 cut(s)	86, 744, 921
MaeII	ACGT	1 cut(s)	90
MalI	GATC	1 cut(s)	724
MboI	GATC	1 cut(s)	722
MhlI	GDGCHC	2 cut(s)	320, 374
MluCI	AATT	5 cut(s)	551, 643, 756, 905, 914
Mly113I	GGCGCC	1 cut(s)	45
MlyI	GAGTC	3 cut(s)	135, 195, 409
MmeI	TCCRAC	1 cut(s)	164
MnlI	CCTC	7 cut(s)	93, 181, 191, 429, 472, 802, 812
Mph1103I	ATGCAT	1 cut(s)	81
MreI	CGCCGGCG	1 cut(s)	41
MroNI	GCCGGC	1 cut(s)	41
MroXI	GAANNNNTTC	2 cut(s)	616, 756
MseI	TTAA	1 cut(s)	461
MspA1I	CMGCKG	1 cut(s)	313
MspCI	CTTAAG	1 cut(s)	460
MspI	CCGG	2 cut(s)	42, 54
MspR9I	CCNGG	3 cut(s)	55, 321, 713
Mva1269I	GAATGC	1 cut(s)	616
MvaI	CCWGG	2 cut(s)	321, 713
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	5 cut(s)	59, 68, 341, 347, 668
NaeI	GCCGGC	1 cut(s)	43
NarI	GGCGCC	1 cut(s)	45
NciI	CCSGG	1 cut(s)	55
NdeI	CATATG	1 cut(s)	562
NdeII	GATC	1 cut(s)	722
NgoMIV	GCCGGC	1 cut(s)	41
NlaIII	CATG	3 cut(s)	249, 542, 785
NlaIV	GGNNCC	2 cut(s)	46, 235
NsiI	ATGCAT	1 cut(s)	81
NspI	RCATGY	1 cut(s)	785
PciSI	GCTCTTC	1 cut(s)	268
PctI	GAATGC	1 cut(s)	616
PdiI	GCCGGC	1 cut(s)	43
PdmI	GAANNNNTTC	2 cut(s)	616, 756
PfeI	GAWTC	2 cut(s)	632, 834
Pfl23II	CGTACG	1 cut(s)	98
PflFI	GACNNNGTC	1 cut(s)	92
PflMI	CCANNNNNTGG	1 cut(s)	443
PkrI	GCNGC	9 cut(s)	73, 312, 343, 408, 493, 661, 688, 735, 868
PleI	GAGTC	3 cut(s)	134, 195, 409
PluTI	GGCGCC	1 cut(s)	48
PpsI	GAGTC	3 cut(s)	134, 195, 409
PsiI	TTATAA	1 cut(s)	501
Psp6I	CCWGG	2 cut(s)	319, 711
PspGI	CCWGG	2 cut(s)	319, 711
PspLI	CGTACG	1 cut(s)	98
PspN4I	GGNNCC	2 cut(s)	46, 235
PstI	CTGCAG	2 cut(s)	343, 531
PstNI	CAGNNNCTG	1 cut(s)	350
PsyI	GACNNNGTC	1 cut(s)	92
PvuII	CAGCTG	1 cut(s)	313
RsaI	GTAC	3 cut(s)	100, 801, 900
RsaNI	GTAC	3 cut(s)	99, 800, 899
SapI	GCTCTTC	1 cut(s)	268
SaqAI	TTAA	1 cut(s)	461
SatI	GCNGC	9 cut(s)	72, 311, 342, 407, 492, 660, 687, 734, 867
Sau3AI	GATC	1 cut(s)	722
SchI	GAGTC	3 cut(s)	135, 195, 409
ScrFI	CCNGG	3 cut(s)	55, 321, 713
SduI	GDGCHC	2 cut(s)	320, 374
SfaNI	GCATC	5 cut(s)	66, 88, 445, 680, 708
SfcI	CTRYAG	3 cut(s)	339, 468, 527
SfoI	GGCGCC	1 cut(s)	46
SgrAI	CRCCGGYG	1 cut(s)	41
SmlI	CTYRAG	1 cut(s)	460
SmoI	CTYRAG	1 cut(s)	460
Sse9I	AATT	5 cut(s)	551, 643, 756, 905, 914
SsiI	CCGC	2 cut(s)	39, 71
SspDI	GGCGCC	1 cut(s)	44
SspMI	CTAG	3 cut(s)	86, 744, 921
StyD4I	CCNGG	3 cut(s)	53, 319, 711
TaaI	ACNGT	4 cut(s)	67, 241, 799, 804
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	3 cut(s)	124, 181, 727
TasI	AATT	5 cut(s)	551, 643, 756, 905, 914
TatI	WGTACW	1 cut(s)	898
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	2 cut(s)	632, 834
Tru1I	TTAA	1 cut(s)	461
Tru9I	TTAA	1 cut(s)	461
TscAI	CASTG	6 cut(s)	23, 29, 70, 244, 642, 754
TseI	GCWGC	8 cut(s)	310, 341, 406, 491, 659, 686, 733, 866
TspDTI	ATGAA	4 cut(s)	234, 317, 413, 579
TspGWI	ACGGA	2 cut(s)	86, 563
TspRI	CASTG	6 cut(s)	23, 29, 70, 244, 642, 754
Tth111I	GACNNNGTC	1 cut(s)	92
Van91I	CCANNNNNTGG	1 cut(s)	443
Vha464I	CTTAAG	1 cut(s)	460
VneI	GTGCAC	1 cut(s)	370
XapI	RAATTY	4 cut(s)	643, 756, 905, 914
XbaI	TCTAGA	1 cut(s)	85
XceI	RCATGY	1 cut(s)	785
XcmI	CCANNNNNNNNNTGG	1 cut(s)	181
XmiI	GTMKAC	1 cut(s)	888
XmnI	GAANNNNTTC	2 cut(s)	616, 756
XspI	CTAG	3 cut(s)	86, 744, 921
Zsp2I	ATGCAT	1 cut(s)	81

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.