pycom02g10990

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7761206 .. 7764775
3570 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10990.4

Sequence Viewer

Length: 936 bp
ATGTCGTCGGCGTCGCAGTGGCAGTGGGAAACCGCCACCGCCGGCGCCGTCGCAGGATTCGCCACCGTCGCTGCCATGCATCCCCTCGACGTTGTCCGTACCAGGTTTCAAGTCAACGACGGTCGAGTCTTGAATCTTCCGACTTACAAGAACACGGCTCACGCCATTTTTACCATTGCTCGAGCGGAGGGCCTGAGAGGACTCTACGCAGGCTTCTCTCCTGCGGTTCTAGGTTCCACTGTTTCATGGGGTTTATATTTCTTCTTCTATGGAAGAGCAAAAGAAAGGTATTCTAAGGACAGGGAAAAGCAGCTGAGCGCTGGCCTTCATCTTGCTTCTGCAGCAGAAGCTGGTGCTTTGGTTTCTTTGTGCACGAATCCTATTTGGCTTGTAAAAACAAGATTGCAGCTTCAGACTCCTCTCCATCAAACTCGACCATATTCTGGGTTTTATGATGCCTTAAGAACCATAATCAGAGAGGAAGGGTGGGCTGCGCTTTATAAAGGCCTTCTTCCCAGTCTCTTTCTGCAGGTTTCTCATGGTGCTATTCAATTCACAGCATATGAAGAACTCCGTAAAATCGTTGTTGACTTCAAGTCTAAAAAAAGCAGAACGCATTCTGGAAGTGCTGATACAGTGCTGAATTCAGTTGACTATGCAGCATTGGGTGGATCATCTAAAGTTGCGGCCATTCTTCTATCATATCCATTCCAGGTGATACGATCTCGATTGCAGCAACGACCTAGTAGTGAAGGAATTCCAAGATATATGGATAGCTGGCATGTAGTAAGGGAAACTGCACGGTTCGAGGGCATTCGAGGTTTCTACAAGGGAATCACACCAAATCTTCTGAAAAACGTTCCTGCTGCTTCGATAACTTTTATTGTATACGAAAATGTACTGAAATTTCTAAAATTGGCTAGAACGAACGAATAA

Protein Analysis

312

Amino Acids

34.58

Weight (kDa)

9.91

Isoelectric Point (pI)

34.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 501
AasI GACNNNNNNGTC 1 cut(s) 125
Acc36I ACCTGC 1 cut(s) 520
AccB1I GGYRCC 1 cut(s) 44
AccB7I CCANNNNNTGG 1 cut(s) 443
AccBSI CCGCTC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 888
AciI CCGC 5 cut(s) 33, 39, 185, 224, 686
AclI AACGTT 1 cut(s) 858
AclWI GGATC 1 cut(s) 679
AcoI YGGCCR 1 cut(s) 687
AcsI RAATTY 3 cut(s) 643, 756, 905
AcuI CTGAAG 1 cut(s) 395
AcyI GRCGYC 2 cut(s) 11, 45
AfaI GTAC 2 cut(s) 100, 900
AfeI AGCGCT 1 cut(s) 319
AfiI CCNNNNNNNGG 1 cut(s) 443
AflII CTTAAG 1 cut(s) 460
AgsI TTSAA 4 cut(s) 110, 133, 551, 595
AhdI GACNNNNNGTC 1 cut(s) 595
AjnI CCWGG 2 cut(s) 101, 711
AluBI AGCT 4 cut(s) 313, 350, 409, 777
AluI AGCT 4 cut(s) 313, 350, 409, 777
Alw21I GWGCWC 1 cut(s) 374
Alw26I GTCTC 1 cut(s) 524
Alw44I GTGCAC 1 cut(s) 370
AlwI GGATC 1 cut(s) 679
AlwNI CAGNNNCTG 1 cut(s) 350
Ama87I CYCGRG 1 cut(s) 180
Aor51HI AGCGCT 1 cut(s) 319
AoxI GGCC 4 cut(s) 190, 322, 505, 687
ApaLI GTGCAC 1 cut(s) 370
ApeKI GCWGC 8 cut(s) 71, 310, 341, 406, 491, 659, 733, 866
ApoI RAATTY 3 cut(s) 643, 756, 905
Asp700I GAANNNNTTC 2 cut(s) 616, 756
AspLEI GCGC 3 cut(s) 47, 320, 496
AspS9I GGNCC 1 cut(s) 190
AsuHPI GGTGA 1 cut(s) 727
AvaI CYCGRG 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 374
BanI GGYRCC 1 cut(s) 44
BarI GAAGNNNNNNTAC 2 cut(s) 616, 648
Bbv12I GWGCWC 1 cut(s) 374
BbvI GCAGC 8 cut(s) 58, 322, 353, 418, 478, 671, 745, 853
BccI CCATC 1 cut(s) 432
BceAI ACGGC 2 cut(s) 32, 171
BciT130I CCWGG 2 cut(s) 103, 713
BcoDI GTCTC 1 cut(s) 524
BfaI CTAG 3 cut(s) 230, 744, 921
BfmI CTRYAG 2 cut(s) 339, 527
BfoI RGCGCY 2 cut(s) 48, 321
BfrI CTTAAG 1 cut(s) 460
BfuAI ACCTGC 1 cut(s) 520
BisI GCNGC 9 cut(s) 72, 311, 342, 407, 492, 660, 687, 734, 867
BlpI GCTNAGC 1 cut(s) 314
BlsI GCNGC 9 cut(s) 73, 312, 343, 408, 493, 661, 688, 735, 868
Bme1390I CCNGG 2 cut(s) 103, 713
BmeRI GACNNNNNGTC 1 cut(s) 595
BmeT110I CYCGRG 1 cut(s) 180
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 2 cut(s) 46, 235
BmrFI CCNGG 2 cut(s) 103, 713
BmrI ACTGGG 1 cut(s) 510
BmsI GCATC 2 cut(s) 88, 445
BmuI ACTGGG 1 cut(s) 510
Bpu1102I GCTNAGC 1 cut(s) 314
BsaHI GRCGYC 2 cut(s) 11, 45
Bsc4I CCNNNNNNNGG 1 cut(s) 443
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 516
Bse3DI GCAATG 1 cut(s) 174
BseBI CCWGG 2 cut(s) 103, 713
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 443
BseMI GCAATG 1 cut(s) 174
BseMII CTCAG 2 cut(s) 185, 305
BseNI ACTGG 1 cut(s) 516
BseRI GAGGAG 1 cut(s) 408
BseSI GKGCMC 1 cut(s) 374
BseXI GCAGC 8 cut(s) 58, 322, 353, 418, 478, 671, 745, 853
BsgI GTGCAG 1 cut(s) 783
Bsh1285I CGRYCG 1 cut(s) 124
BshFI GGCC 4 cut(s) 192, 324, 507, 689
BshNI GGYRCC 1 cut(s) 44
BsiEI CGRYCG 1 cut(s) 124
BsiHKAI GWGCWC 1 cut(s) 374
BsiHKCI CYCGRG 1 cut(s) 180
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 443
BsmAI GTCTC 1 cut(s) 524
BsmI GAATGC 2 cut(s) 616, 813
BsnI GGCC 4 cut(s) 192, 324, 507, 689
BsoBI CYCGRG 1 cut(s) 180
Bsp1286I GDGCHC 1 cut(s) 374
Bsp143I GATC 2 cut(s) 671, 722
Bsp1720I GCTNAGC 1 cut(s) 314
BspACI CCGC 5 cut(s) 33, 39, 185, 224, 686
BspANI GGCC 4 cut(s) 192, 324, 507, 689
BspCNI CTCAG 2 cut(s) 186, 306
BspLI GGNNCC 2 cut(s) 46, 235
BspMAI CTGCAG 2 cut(s) 343, 531
BspMI ACCTGC 1 cut(s) 520
BspPI GGATC 1 cut(s) 679
BspQI GCTCTTC 1 cut(s) 268
BspT107I GGYRCC 1 cut(s) 44
BspTI CTTAAG 1 cut(s) 460
BsrBI CCGCTC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 174
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 1 cut(s) 516
BssAI RCCGGY 1 cut(s) 41
BssMI GATC 2 cut(s) 671, 722
BssNAI GTATAC 1 cut(s) 889
BssNI GRCGYC 2 cut(s) 11, 45
Bst1107I GTATAC 1 cut(s) 889
Bst2UI CCWGG 2 cut(s) 103, 713
Bst4CI ACNGT 5 cut(s) 67, 122, 241, 637, 804
Bst6I CTCTTC 1 cut(s) 268
BstACI GRCGYC 2 cut(s) 11, 45
BstAFI CTTAAG 1 cut(s) 460
BstC8I GCNNGC 4 cut(s) 43, 211, 322, 779
BstDEI CTNAG 3 cut(s) 194, 294, 314
BstF5I GGATG 1 cut(s) 79
BstH2I RGCGCY 2 cut(s) 48, 321
BstHHI GCGC 3 cut(s) 47, 320, 496
BstKTI GATC 2 cut(s) 674, 725
BstMAI GTCTC 1 cut(s) 524
BstMBI GATC 2 cut(s) 671, 722
BstMCI CGRYCG 1 cut(s) 124
BstMWI GCNNNNNNNGC 4 cut(s) 59, 68, 341, 347
BstNI CCWGG 2 cut(s) 103, 713
BstNSI RCATGY 1 cut(s) 785
BstSCI CCNGG 2 cut(s) 101, 711
BstSFI CTRYAG 2 cut(s) 339, 527
BstSLI GKGCMC 1 cut(s) 374
BstV1I GCAGC 8 cut(s) 58, 322, 353, 418, 478, 671, 745, 853
BstZ17I GTATAC 1 cut(s) 889
BsuRI GGCC 4 cut(s) 192, 324, 507, 689
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 2 cut(s) 23, 29
BtsIMutI CAGTG 4 cut(s) 23, 29, 237, 642
BveI ACCTGC 1 cut(s) 520
Cac8I GCNNGC 4 cut(s) 43, 211, 322, 779
CaiI CAGNNNCTG 1 cut(s) 350
CfoI GCGC 3 cut(s) 47, 320, 496
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 190
CsiI ACCWGGT 1 cut(s) 101
Csp6I GTAC 2 cut(s) 99, 899
CviAII CATG 4 cut(s) 76, 246, 539, 782
CviQI GTAC 2 cut(s) 99, 899
DdeI CTNAG 3 cut(s) 194, 294, 314
DinI GGCGCC 1 cut(s) 46
DpnI GATC 2 cut(s) 673, 724
DpnII GATC 2 cut(s) 671, 722
DrdI GACNNNNNNGTC 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 595
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 687
Eam1104I CTCTTC 1 cut(s) 268
Eam1105I GACNNNNNGTC 1 cut(s) 595
EarI CTCTTC 1 cut(s) 268
Eco147I AGGCCT 1 cut(s) 507
Eco47III AGCGCT 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 395
Eco88I CYCGRG 1 cut(s) 180
EcoO109I RGGNCCY 1 cut(s) 190
EcoRI GAATTC 2 cut(s) 643, 756
EcoRII CCWGG 2 cut(s) 101, 711
EcoT22I ATGCAT 1 cut(s) 81
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
FaeI CATG 4 cut(s) 79, 249, 542, 785
FalI AAGNNNNNCTT 2 cut(s) 495, 527
FatI CATG 4 cut(s) 75, 245, 538, 781
FauNDI CATATG 1 cut(s) 562
FblI GTMKAC 1 cut(s) 888
Fnu4HI GCNGC 9 cut(s) 72, 311, 342, 407, 492, 660, 687, 734, 867
FokI GGATG 1 cut(s) 66
Fsp4HI GCNGC 9 cut(s) 72, 311, 342, 407, 492, 660, 687, 734, 867
FspBI CTAG 3 cut(s) 230, 744, 921
GlaI GCGC 3 cut(s) 46, 319, 495
GluI GCNGC 9 cut(s) 72, 311, 342, 407, 492, 660, 687, 734, 867
HaeII RGCGCY 2 cut(s) 48, 321
HaeIII GGCC 4 cut(s) 192, 324, 507, 689
HapII CCGG 1 cut(s) 42
HhaI GCGC 3 cut(s) 47, 320, 496
Hin1I GRCGYC 2 cut(s) 11, 45
Hin1II CATG 4 cut(s) 79, 249, 542, 785
Hin6I GCGC 3 cut(s) 45, 318, 494
HinP1I GCGC 3 cut(s) 45, 318, 494
HincII GTYRAC 3 cut(s) 115, 589, 652
HindII GTYRAC 3 cut(s) 115, 589, 652
HinfI GANTC 7 cut(s) 57, 126, 133, 201, 376, 415, 834
HpaII CCGG 1 cut(s) 42
HphI GGTGA 1 cut(s) 727
Hpy166II GTNNAC 5 cut(s) 115, 372, 589, 652, 889
Hpy188I TCNGA 4 cut(s) 141, 414, 476, 852
Hpy188III TCNNGA 3 cut(s) 130, 621, 726
Hpy8I GTNNAC 5 cut(s) 115, 372, 589, 652, 889
Hpy99I CGWCG 6 cut(s) 10, 16, 53, 71, 92, 122
HpyAV CCTTC 4 cut(s) 335, 476, 518, 746
HpyCH4III ACNGT 5 cut(s) 67, 122, 241, 637, 804
HpyCH4IV ACGT 2 cut(s) 90, 858
HpyCH4V TGCA 8 cut(s) 79, 341, 372, 406, 529, 659, 733, 800
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 68, 341, 347
HpyF3I CTNAG 3 cut(s) 194, 294, 314
HpySE526I ACGT 2 cut(s) 90, 858
Hsp92I GRCGYC 2 cut(s) 11, 45
Hsp92II CATG 4 cut(s) 79, 249, 542, 785
HspAI GCGC 3 cut(s) 45, 318, 494
KasI GGCGCC 1 cut(s) 44
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Kzo9I GATC 2 cut(s) 671, 722
LguI GCTCTTC 1 cut(s) 268
Lsp1109I GCAGC 8 cut(s) 58, 322, 353, 418, 478, 671, 745, 853
LweI GCATC 2 cut(s) 88, 445
MabI ACCWGGT 1 cut(s) 101
MaeI CTAG 3 cut(s) 230, 744, 921
MaeII ACGT 2 cut(s) 90, 858
MalI GATC 2 cut(s) 673, 724
MbiI CCGCTC 1 cut(s) 185
MboI GATC 2 cut(s) 671, 722
MboII GAAGA 8 cut(s) 128, 253, 256, 285, 503, 578, 686, 839
MhlI GDGCHC 1 cut(s) 374
MluCI AATT 5 cut(s) 551, 643, 756, 905, 914
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 3 cut(s) 135, 195, 409
MmeI TCCRAC 1 cut(s) 164
MnlI CCTC 7 cut(s) 95, 181, 191, 429, 472, 802, 812
Mph1103I ATGCAT 1 cut(s) 81
MreI CGCCGGCG 1 cut(s) 41
MroNI GCCGGC 1 cut(s) 41
MroXI GAANNNNTTC 2 cut(s) 616, 756
MseI TTAA 1 cut(s) 461
MspA1I CMGCKG 1 cut(s) 313
MspCI CTTAAG 1 cut(s) 460
MspI CCGG 1 cut(s) 42
MspR9I CCNGG 2 cut(s) 103, 713
Mva1269I GAATGC 2 cut(s) 616, 813
MvaI CCWGG 2 cut(s) 103, 713
MwoI GCNNNNNNNGC 4 cut(s) 59, 68, 341, 347
NaeI GCCGGC 1 cut(s) 43
NarI GGCGCC 1 cut(s) 45
NdeI CATATG 1 cut(s) 562
NdeII GATC 2 cut(s) 671, 722
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 4 cut(s) 79, 249, 542, 785
NlaIV GGNNCC 2 cut(s) 46, 235
NsiI ATGCAT 1 cut(s) 81
NspI RCATGY 1 cut(s) 785
PaeR7I CTCGAG 1 cut(s) 180
PceI AGGCCT 1 cut(s) 507
PciSI GCTCTTC 1 cut(s) 268
PctI GAATGC 2 cut(s) 616, 813
PdiI GCCGGC 1 cut(s) 43
PdmI GAANNNNTTC 2 cut(s) 616, 756
PfeI GAWTC 4 cut(s) 57, 133, 376, 834
PflFI GACNNNGTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 443
PkrI GCNGC 9 cut(s) 73, 312, 343, 408, 493, 661, 688, 735, 868
PleI GAGTC 3 cut(s) 134, 195, 409
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 3 cut(s) 134, 195, 409
PsiI TTATAA 1 cut(s) 501
Psp1406I AACGTT 1 cut(s) 858
Psp6I CCWGG 2 cut(s) 101, 711
PspGI CCWGG 2 cut(s) 101, 711
PspN4I GGNNCC 2 cut(s) 46, 235
PspPI GGNCC 1 cut(s) 190
PspXI VCTCGAGB 1 cut(s) 180
PstI CTGCAG 2 cut(s) 343, 531
PstNI CAGNNNCTG 1 cut(s) 350
PsyI GACNNNGTC 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 313
RsaI GTAC 2 cut(s) 100, 900
RsaNI GTAC 2 cut(s) 99, 899
SapI GCTCTTC 1 cut(s) 268
SaqAI TTAA 1 cut(s) 461
SatI GCNGC 9 cut(s) 72, 311, 342, 407, 492, 660, 687, 734, 867
Sau3AI GATC 2 cut(s) 671, 722
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 3 cut(s) 135, 195, 409
ScrFI CCNGG 2 cut(s) 103, 713
SduI GDGCHC 1 cut(s) 374
SexAI ACCWGGT 1 cut(s) 101
SfaNI GCATC 2 cut(s) 88, 445
SfcI CTRYAG 2 cut(s) 339, 527
SfoI GGCGCC 1 cut(s) 46
Sfr274I CTCGAG 1 cut(s) 180
SgrAI CRCCGGYG 1 cut(s) 41
SlaI CTCGAG 1 cut(s) 180
SmlI CTYRAG 2 cut(s) 180, 460
SmoI CTYRAG 2 cut(s) 180, 460
Sse9I AATT 5 cut(s) 551, 643, 756, 905, 914
SseBI AGGCCT 1 cut(s) 507
SsiI CCGC 5 cut(s) 33, 39, 185, 224, 686
SspDI GGCGCC 1 cut(s) 44
SspMI CTAG 3 cut(s) 230, 744, 921
StuI AGGCCT 1 cut(s) 507
StyD4I CCNGG 2 cut(s) 101, 711
TaaI ACNGT 5 cut(s) 67, 122, 241, 637, 804
TaiI ACGT 2 cut(s) 93, 861
TaqI TCGA 8 cut(s) 87, 124, 181, 433, 727, 807, 817, 872
TasI AATT 5 cut(s) 551, 643, 756, 905, 914
TatI WGTACW 1 cut(s) 898
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 4 cut(s) 57, 133, 376, 834
Tru1I TTAA 1 cut(s) 461
Tru9I TTAA 1 cut(s) 461
TscAI CASTG 4 cut(s) 23, 29, 244, 642
TseI GCWGC 8 cut(s) 71, 310, 341, 406, 491, 659, 733, 866
TspDTI ATGAA 3 cut(s) 234, 317, 579
TspGWI ACGGA 2 cut(s) 86, 563
TspRI CASTG 4 cut(s) 23, 29, 244, 642
Tth111I GACNNNGTC 1 cut(s) 92
Van91I CCANNNNNTGG 1 cut(s) 443
Vha464I CTTAAG 1 cut(s) 460
VneI GTGCAC 1 cut(s) 370
XapI RAATTY 3 cut(s) 643, 756, 905
XceI RCATGY 1 cut(s) 785
XhoI CTCGAG 1 cut(s) 180
XmiI GTMKAC 1 cut(s) 888
XmnI GAANNNNTTC 2 cut(s) 616, 756
XspI CTAG 3 cut(s) 230, 744, 921
Zsp2I ATGCAT 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.