Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012226

Physical Location & Seq

Genomic Coordinates Forward (+)

26636589 .. 26638794

Gene Structure 2206 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G66710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGAGACCTCGCGGGTATCAACGAGCTCCGTCAATGCAGAAACCAACAGATTATCCGACGGATAAGACGCTTCATCCGAATTACCCATTTCTCATGTCCTCTCATGGTCTCAAGTCCTTTGAATCGGACGACGAAGACGACGACTCCGACTCCTCCAACGATCAATTCGCTTTCACTATCAACACAGAGTTGCTTGTCGATGTCAAAGACATATCTATAGGGGACTTCATCGGCGAAGGTTCATCATCTACTGTCTACAGAGGATTGTTCAGGAGAGTTGTCCCTGTGTCTGTGAAGATATTCCAGCCTAAAAGAACATCTGCTTTAAGCATTGAGCAGAGGAAGAAGTTTCAGAGAGAGGTTTTGCTGCTTTCCAAGTTTAGACATGAAAACATTGTGCGGTTCATTGGGGCGTGCATAGAACCAAAGTTGATGATAATTACTGAACTCATGGAAGGCAATACTCTTCAGAAGTTTATGTTGAGTGTTCGTCCAAAGCCTCTTGATCTGAAGCTCTCCATTAGCTTTGCGTTGGATATTGCTCGGGGAATGGAGTTCTTGAATGCAAATGGCATTATTCACCGAGATTTGAAACCAAGTAATATGCTCTTAACAGGTGATCAGAAACATGTAAAGTTGGCTGACTTTGGACTTGCTAGAGAGGAGACTAAAGGTTTCATGACCTTTGAGGCTGGTACATACAGATGGATGGCTCCAGAGTTATTCAGCTATGACACGCTTGAAATTGGCGAAAAGAAACACTACGATCATAAGGTGGACGTTTACAGTTTCGCCATTGTTTTCTGGGAGTTACTTACCAACAAAACCCCATTCAAAGGAAAGAACAACATCTTTGTAGCTTATGCTGCCAGCAAAAACCAGAGACCAAGTGTGGAGAATCTTCCAGAAGGCGTTGTTTCTATCCTGCAATCATGCTGGGCAGAGAATCCTGACGCTCGTCCTGAGTTTAAAGAAATTACATATTCACTAACAAACTTGCTCAGAAGCTTAAGCTCAGACACTGATGCTACTTCATCCAATAGCAAAGCCAATATAGCTACCGAGGATTCAACAAGCAGTCTGGTTCAAGAACGTGTTGTCTGTGATTGTCCCGGACTAAAGATGAGCAAGACGAAGAAGCTGAAGAAGAAGACGAATAAACTGATGAATATGATCGTCCCTTTTCTCAAGATCTTCAAAAGTTGTATGTCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04013 ko04064 ko04140 ko04152 ko04214 ko04310 ko04380 ko04520 ko04620 ko04621 ko04622 ko04624 ko04657 ko04660 ko04668 ko05140 ko05145 ko05162 ko05168 ko05169 ko05418 map04010 map04013 map04064 map04140 map04152 map04214 map04310 map04380 map04520 map04620 map04621 map04622 map04624 map04657 map04660 map04668 map05140 map05145 map05162 map05168 map05169 map05418

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

405

Amino Acids

46.01

Weight (kDa)

8.93

Isoelectric Point (pI)

44.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	73 - 328	3e-55	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	74 - 326	3.2e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50720 AT3G50730 AT5G66710
fragaria_vesca	FvH4_1g13890
malus_domestica	MD15G1266800.v1.1
prunus_persica	Prupe.7G150600_v2.0.a1
pyrus_communis	pycom02g11980 pycom12g17500 pycom17g26870
rosa_chinensis	RchiOBHm_Chr2g0102201
rosa_laevigata	RLG00000017138
rosa_multiflora	Rmu_sc0010937.1_g000009
rosa_roxburghii	Rroxscaffold_2G00140690
rosa_rugosa	Rorug02G0105400
rosa_samantha	Rh2AG153500 Rh2BG159400 Rh2CG158900 Rh2DG159100
rosa_wichuraiana	Rw2G011990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	255
AccII	CGCG	1 cut(s)	12
AciI	CCGC	2 cut(s)	12, 400
AcuI	CTGAAG	3 cut(s)	452, 530, 1163
AfaI	GTAC	1 cut(s)	697
AfiI	CCNNNNNNNGG	1 cut(s)	836
AflII	CTTAAG	1 cut(s)	1009
AflIII	ACRYGT	2 cut(s)	628, 1093
AgsI	TTSAA	8 cut(s)	122, 562, 592, 743, 835, 1071, 1088, 1198
AjuI	GAANNNNNNNTTGG	2 cut(s)	149, 181
AluBI	AGCT	9 cut(s)	26, 514, 525, 729, 860, 1008, 1014, 1058, 1141
AluI	AGCT	9 cut(s)	26, 514, 525, 729, 860, 1008, 1014, 1058, 1141
Alw21I	GWGCWC	1 cut(s)	28
Alw26I	GTCTC	3 cut(s)	113, 659, 877
AlwNI	CAGNNNCTG	1 cut(s)	1022
Ama87I	CYCGRG	1 cut(s)	543
ApeKI	GCWGC	2 cut(s)	367, 866
Asp700I	GAANNNNTTC	1 cut(s)	299
AsuC2I	CCSGG	1 cut(s)	1113
AsuHPI	GGTGA	2 cut(s)	572, 629
AvaI	CYCGRG	1 cut(s)	543
BanII	GRGCYC	1 cut(s)	28
BbsI	GAAGAC	2 cut(s)	141, 1157
Bbv12I	GWGCWC	1 cut(s)	28
BbvI	GCAGC	2 cut(s)	354, 853
BccI	CCATC	2 cut(s)	699, 703
BclI	TGATCA	1 cut(s)	619
BcnI	CCSGG	1 cut(s)	1113
BcoDI	GTCTC	3 cut(s)	113, 659, 877
BfaI	CTAG	1 cut(s)	657
BfmI	CTRYAG	2 cut(s)	216, 256
BfrI	CTTAAG	1 cut(s)	1009
BglII	AGATCT	1 cut(s)	1191
BisI	GCNGC	2 cut(s)	368, 867
BlsI	GCNGC	2 cut(s)	369, 868
Bme1390I	CCNGG	1 cut(s)	1113
BmeT110I	CYCGRG	1 cut(s)	543
BmiI	GGNNCC	1 cut(s)	714
BmrFI	CCNGG	1 cut(s)	1113
BmsI	GCATC	1 cut(s)	1015
BoxI	GACNNNNGTC	1 cut(s)	957
BpiI	GAAGAC	2 cut(s)	141, 1157
BpmI	CTGGAG	1 cut(s)	699
BpuEI	CTTGAG	2 cut(s)	95, 1172
BpuMI	CCSGG	1 cut(s)	1113
BsaI	GGTCTC	2 cut(s)	113, 877
BsaJI	CCNNGG	1 cut(s)	1062
BsaXI	ACNNNNNCTCC	4 cut(s)	128, 134, 158, 164
Bsc4I	CCNNNNNNNGG	1 cut(s)	836
BseDI	CCNNGG	1 cut(s)	1062
BseGI	GGATG	3 cut(s)	73, 714, 1034
BseLI	CCNNNNNNNGG	1 cut(s)	836
BseMII	CTCAG	3 cut(s)	954, 1015, 1029
BseRI	GAGGAG	2 cut(s)	142, 677
BseXI	GCAGC	2 cut(s)	354, 853
BseYI	CCCAGC	1 cut(s)	936
Bsh1236I	CGCG	1 cut(s)	12
BsiHKAI	GWGCWC	1 cut(s)	28
BsiHKCI	CYCGRG	1 cut(s)	543
BsiSI	CCGG	1 cut(s)	1113
BslFI	GGGAC	4 cut(s)	236, 266, 1095, 1163
BslI	CCNNNNNNNGG	1 cut(s)	836
BsmAI	GTCTC	3 cut(s)	113, 659, 877
BsmFI	GGGAC	4 cut(s)	236, 266, 1095, 1163
BsmI	GAATGC	1 cut(s)	568
Bso31I	GGTCTC	2 cut(s)	113, 877
BsoBI	CYCGRG	1 cut(s)	543
Bsp1286I	GDGCHC	1 cut(s)	28
Bsp143I	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
BspACI	CCGC	2 cut(s)	12, 400
BspCNI	CTCAG	3 cut(s)	955, 1014, 1028
BspFNI	CGCG	1 cut(s)	12
BspHI	TCATGA	1 cut(s)	678
BspLI	GGNNCC	1 cut(s)	714
BspTI	CTTAAG	1 cut(s)	1009
BspTNI	GGTCTC	2 cut(s)	113, 877
BssECI	CCNNGG	1 cut(s)	1062
BssMI	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
Bst4CI	ACNGT	2 cut(s)	253, 788
Bst6I	CTCTTC	1 cut(s)	471
BstAFI	CTTAAG	1 cut(s)	1009
BstC8I	GCNNGC	2 cut(s)	415, 871
BstDEI	CTNAG	3 cut(s)	963, 1001, 1015
BstF5I	GGATG	3 cut(s)	73, 714, 1034
BstFNI	CGCG	1 cut(s)	12
BstKTI	GATC	6 cut(s)	163, 508, 622, 769, 1176, 1194
BstMAI	GTCTC	3 cut(s)	113, 659, 877
BstMBI	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
BstMWI	GCNNNNNNNGC	2 cut(s)	866, 1055
BstNSI	RCATGY	1 cut(s)	632
BstPAI	GACNNNNGTC	1 cut(s)	957
BstSCI	CCNGG	1 cut(s)	1111
BstSFI	CTRYAG	2 cut(s)	216, 256
BstUI	CGCG	1 cut(s)	12
BstV1I	GCAGC	2 cut(s)	354, 853
BstV2I	GAAGAC	2 cut(s)	141, 1157
BstX2I	RGATCY	1 cut(s)	1191
BstYI	RGATCY	1 cut(s)	1191
BtsCI	GGATG	3 cut(s)	73, 714, 1034
BtsIMutI	CAGTG	1 cut(s)	1020
Cac8I	GCNNGC	2 cut(s)	415, 871
CaiI	CAGNNNCTG	1 cut(s)	1022
CciI	TCATGA	1 cut(s)	678
CseI	GACGC	2 cut(s)	76, 962
Csp6I	GTAC	1 cut(s)	696
CviAII	CATG	7 cut(s)	94, 104, 386, 451, 629, 679, 933
CviQI	GTAC	1 cut(s)	696
DdeI	CTNAG	3 cut(s)	963, 1001, 1015
DpnI	GATC	6 cut(s)	162, 507, 621, 768, 1175, 1193
DpnII	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
DraI	TTTAAA	1 cut(s)	970
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
Ecl136II	GAGCTC	1 cut(s)	26
Eco24I	GRGCYC	1 cut(s)	28
Eco31I	GGTCTC	2 cut(s)	113, 877
Eco53kI	GAGCTC	1 cut(s)	26
Eco57I	CTGAAG	3 cut(s)	452, 530, 1163
Eco88I	CYCGRG	1 cut(s)	543
EcoICRI	GAGCTC	1 cut(s)	26
EcoT38I	GRGCYC	1 cut(s)	28
FaeI	CATG	7 cut(s)	97, 107, 389, 454, 632, 682, 936
FaqI	GGGAC	4 cut(s)	236, 266, 1095, 1163
FatI	CATG	7 cut(s)	93, 103, 385, 450, 628, 678, 932
FauI	CCCGC	1 cut(s)	5
FbaI	TGATCA	1 cut(s)	619
FblI	GTMKAC	1 cut(s)	255
Fnu4HI	GCNGC	2 cut(s)	368, 867
FokI	GGATG	3 cut(s)	60, 721, 1021
FriOI	GRGCYC	1 cut(s)	28
Fsp4HI	GCNGC	2 cut(s)	368, 867
FspBI	CTAG	1 cut(s)	657
GluI	GCNGC	2 cut(s)	368, 867
GsaI	CCCAGC	1 cut(s)	940
GsuI	CTGGAG	1 cut(s)	699
HapII	CCGG	1 cut(s)	1113
HgaI	GACGC	2 cut(s)	76, 962
Hin1II	CATG	7 cut(s)	97, 107, 389, 454, 632, 682, 936
HindIII	AAGCTT	1 cut(s)	1006
HinfI	GANTC	6 cut(s)	122, 143, 149, 898, 946, 1067
HpaII	CCGG	1 cut(s)	1113
HphI	GGTGA	2 cut(s)	572, 629
Hpy166II	GTNNAC	3 cut(s)	256, 778, 784
Hpy8I	GTNNAC	3 cut(s)	256, 778, 784
Hpy99I	CGWCG	3 cut(s)	61, 134, 143
HpyAV	CCTTC	3 cut(s)	230, 449, 902
HpyCH4III	ACNGT	2 cut(s)	253, 788
HpyCH4IV	ACGT	2 cut(s)	780, 1093
HpyCH4V	TGCA	4 cut(s)	37, 417, 566, 928
HpyF10VI	GCNNNNNNNGC	2 cut(s)	866, 1055
HpyF3I	CTNAG	3 cut(s)	963, 1001, 1015
HpySE526I	ACGT	2 cut(s)	780, 1093
Hsp92II	CATG	7 cut(s)	97, 107, 389, 454, 632, 682, 936
Ksp22I	TGATCA	1 cut(s)	619
Kzo9I	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
LmnI	GCTCC	2 cut(s)	31, 718
Lsp1109I	GCAGC	2 cut(s)	354, 853
LweI	GCATC	1 cut(s)	1015
MaeI	CTAG	1 cut(s)	657
MaeII	ACGT	2 cut(s)	780, 1093
MaeIII	GTNAC	1 cut(s)	810
MalI	GATC	6 cut(s)	162, 507, 621, 768, 1175, 1193
MboI	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
MflI	RGATCY	1 cut(s)	1191
MhlI	GDGCHC	1 cut(s)	28
MluCI	AATT	5 cut(s)	79, 164, 438, 744, 975
MlyI	GAGTC	2 cut(s)	137, 143
MmeI	TCCRAC	4 cut(s)	80, 171, 180, 513
MroXI	GAANNNNTTC	1 cut(s)	299
MseI	TTAA	4 cut(s)	326, 611, 969, 1010
MslI	CAYNNNNRTG	1 cut(s)	703
MspCI	CTTAAG	1 cut(s)	1009
MspI	CCGG	1 cut(s)	1113
MspR9I	CCNGG	1 cut(s)	1113
Mva1269I	GAATGC	1 cut(s)	568
MvnI	CGCG	1 cut(s)	12
MwoI	GCNNNNNNNGC	2 cut(s)	866, 1055
NciI	CCSGG	1 cut(s)	1113
NdeII	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
NlaIII	CATG	7 cut(s)	97, 107, 389, 454, 632, 682, 936
NlaIV	GGNNCC	1 cut(s)	714
NspI	RCATGY	1 cut(s)	632
PagI	TCATGA	1 cut(s)	678
PciI	ACATGT	1 cut(s)	628
PcsI	WCGNNNNNNNCGW	4 cut(s)	74, 135, 138, 144
PctI	GAATGC	1 cut(s)	568
PdmI	GAANNNNTTC	1 cut(s)	299
PfeI	GAWTC	4 cut(s)	122, 898, 946, 1067
PfoI	TCCNGGA	1 cut(s)	1111
PkrI	GCNGC	2 cut(s)	369, 868
PleI	GAGTC	2 cut(s)	137, 143
PpsI	GAGTC	2 cut(s)	137, 143
PscI	ACATGT	1 cut(s)	628
PshAI	GACNNNNGTC	1 cut(s)	957
Psp124BI	GAGCTC	1 cut(s)	28
PspFI	CCCAGC	1 cut(s)	936
PspN4I	GGNNCC	1 cut(s)	714
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	1 cut(s)	1191
RsaI	GTAC	1 cut(s)	697
RsaNI	GTAC	1 cut(s)	696
RseI	CAYNNNNRTG	1 cut(s)	703
SacI	GAGCTC	1 cut(s)	28
SaqAI	TTAA	4 cut(s)	326, 611, 969, 1010
SatI	GCNGC	2 cut(s)	368, 867
Sau3AI	GATC	6 cut(s)	160, 505, 619, 766, 1173, 1191
SchI	GAGTC	2 cut(s)	137, 143
ScrFI	CCNGG	1 cut(s)	1113
SduI	GDGCHC	1 cut(s)	28
SfaNI	GCATC	1 cut(s)	1015
SfcI	CTRYAG	2 cut(s)	216, 256
SmiMI	CAYNNNNRTG	1 cut(s)	703
SmlI	CTYRAG	3 cut(s)	110, 1009, 1187
SmoI	CTYRAG	3 cut(s)	110, 1009, 1187
Sse9I	AATT	5 cut(s)	79, 164, 438, 744, 975
SsiI	CCGC	2 cut(s)	12, 400
SspMI	CTAG	1 cut(s)	657
SstI	GAGCTC	1 cut(s)	28
StyD4I	CCNGG	1 cut(s)	1111
TaaI	ACNGT	2 cut(s)	253, 788
TaiI	ACGT	2 cut(s)	783, 1096
TaqI	TCGA	1 cut(s)	198
TasI	AATT	5 cut(s)	79, 164, 438, 744, 975
TfiI	GAWTC	4 cut(s)	122, 898, 946, 1067
Tru1I	TTAA	4 cut(s)	326, 611, 969, 1010
Tru9I	TTAA	4 cut(s)	326, 611, 969, 1010
TscAI	CASTG	1 cut(s)	1027
TseI	GCWGC	2 cut(s)	367, 866
TspDTI	ATGAA	8 cut(s)	62, 217, 231, 394, 402, 667, 1023, 1181
TspGWI	ACGGA	2 cut(s)	18, 74
TspRI	CASTG	1 cut(s)	1027
Vha464I	CTTAAG	1 cut(s)	1009
XceI	RCATGY	1 cut(s)	632
XmiI	GTMKAC	1 cut(s)	255
XmnI	GAANNNNTTC	1 cut(s)	299
XspI	CTAG	1 cut(s)	657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.