MD15G1266800.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
22927482 .. 22932113
4632 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1266800.v1.1.491

Sequence Viewer

Length: 1215 bp
ATGGAGGGAGAGGAAAGCGTGTTCATCGACCTGTACACGAAGGACCCTGCTGAAAGCACAGGAAGCGGCGGCGAGGGGAAGGGAGCTGCGGCGGGGAAGGCCAGCTCCGCCTTCAAATTCGACCCCAGCTTTCTGATTGACCCGAGCTGCATCAAGATTGGTTCTGTGCTCGGAGAAGGGCGTGGAGCTATTGTTTATGAGGGATTGTGGGTTGCTCACATTGTTTGTATGTTCTTGAATTGTGGTGCTTTTTTCGGTGCTGGTTTGTTTGAGTTGGTGTACCAATCCAAGCCTGTTGCTGTAAAAATTATACGGCCACCCAAAACAAAATATGTTAGTCTTGATCGTCAAGAAAAGTTTCATCGGGAAGTGTCAATGCTTTCGAAGGTGAAGCATGACAATATTGTCAAGTTCGTAGGCGCATGCTTTGAACCTTCGATGATAATTCTTACTGAGCTTCTGAGAGGAGGTAACCTCCAGAAGTACCTATGGGAAAGGCGCCCCGGAACACCTGATCTCAAGTGTTCAATAAGTTTTGCAATGGATGTCTGTCGAGCTATGGAATACTTGCATGCAAATGGCATTATCCACCGTGACCTGAAACCAGCCAACCTGCTTCTTACAGAAGACCTGAACATGATAAAGGTGGCCGACTTCGGCCACGCTAGAGAAGAAATATCCGGGGCCATGACCTCGGAGGCGGGCACTTACAGATGGATGGCTCCTGAGCTATTCAGCACAGAGCCAGTTCCAAAAGGATCAAAGAAGGAATACGATCACAAGGCTGACGTGTACAGCTTCTCGATAGTTCTATGGGAACTGATAATAAACCAAACTCCTTTCTCCGGACGGACTAATATAATAGTTGCATATGCAGCAGCGAACAAAATACGGCCAGAGCTGGACTACATTCCTCAAGATCTCATTCCGCTCCTGGAGTCCTGTTGGGCTGACGACCCAAAGATCCGACCTGAGTTCATGGAGATCACAAGCCATCTTTCCAACTACCACAAACAACTGTGTGCGGCTGAGTTGGAACCTCCAGCAGTCAATGTGCCGGAATCTGAACCTCAAGAGAGCAACGTGAAGGAAGAAGAGCCTCCCAGAGTCCACGCGATTGACAAGTCCGAAAAGAAAAAGAAAGTTAAAAGGCGAAAGAAGTGCAGATCAAGTTTCTTCTTCTTTTGCTGTCGACCTGTAGCGGTGCAGGAGTGA

Protein Analysis

405

Amino Acids

45.32

Weight (kDa)

6.58

Isoelectric Point (pI)

48.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 52 - 333 5.1e-51 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 95 - 332 4.8e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012226)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
Acc36I ACCTGC 1 cut(s) 621
AccB1I GGYRCC 1 cut(s) 498
AccBSI CCGCTC 1 cut(s) 931
AccI GTMKAC 1 cut(s) 1192
AccII CGCG 1 cut(s) 1115
AccIII TCCGGA 1 cut(s) 845
AciI CCGC 9 cut(s) 66, 69, 89, 92, 108, 701, 929, 1025, 1202
AclWI GGATC 2 cut(s) 766, 958
AcoI YGGCCR 4 cut(s) 314, 648, 658, 893
AcsI RAATTY 1 cut(s) 116
AcyI GRCGYC 1 cut(s) 499
AfaI GTAC 4 cut(s) 35, 281, 485, 794
AfiI CCNNNNNNNGG 1 cut(s) 845
AflIII ACRYGT 1 cut(s) 789
AgsI TTSAA 4 cut(s) 115, 238, 431, 528
AjiI CACGTC 1 cut(s) 790
AjnI CCWGG 1 cut(s) 933
AloI GAACNNNNNNTCC 1 cut(s) 37
Alw21I GWGCWC 1 cut(s) 171
AlwI GGATC 2 cut(s) 766, 958
Ama87I CYCGRG 1 cut(s) 142
Aor13HI TCCGGA 1 cut(s) 845
AoxI GGCC 6 cut(s) 99, 314, 648, 658, 684, 893
ApeKI GCWGC 4 cut(s) 86, 147, 875, 878
ApoI RAATTY 1 cut(s) 116
Asp700I GAANNNNTTC 1 cut(s) 357
AspLEI GCGC 2 cut(s) 422, 501
AspS9I GGNCC 2 cut(s) 43, 684
AsuC2I CCSGG 2 cut(s) 504, 682
AsuHPI GGTGA 1 cut(s) 400
AsuII TTCGAA 1 cut(s) 383
AvaI CYCGRG 1 cut(s) 142
AvaII GGWCC 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 707
BanI GGYRCC 1 cut(s) 498
BbsI GAAGAC 1 cut(s) 633
Bbv12I GWGCWC 1 cut(s) 171
BbvI GCAGC 4 cut(s) 73, 134, 887, 890
BccI CCATC 3 cut(s) 708, 712, 1002
BceAI ACGGC 2 cut(s) 329, 908
BcgI CGANNNNNNTGC 2 cut(s) 1143, 1177
BciT130I CCWGG 1 cut(s) 935
BcnI CCSGG 2 cut(s) 504, 682
BfaI CTAG 1 cut(s) 666
BfmI CTRYAG 1 cut(s) 1197
BfoI RGCGCY 1 cut(s) 502
BfuAI ACCTGC 1 cut(s) 621
BglII AGATCT 1 cut(s) 919
BisI GCNGC 8 cut(s) 67, 70, 87, 90, 148, 876, 879, 1026
BlsI GCNGC 8 cut(s) 68, 71, 88, 91, 149, 877, 880, 1027
Bme1390I CCNGG 3 cut(s) 504, 682, 935
Bme18I GGWCC 1 cut(s) 43
BmeT110I CYCGRG 1 cut(s) 142
BmgBI CACGTC 1 cut(s) 790
BmgT120I GGNCC 2 cut(s) 43, 684
BmiI GGNNCC 5 cut(s) 45, 500, 685, 723, 1038
BmrFI CCNGG 3 cut(s) 504, 682, 935
BmsI GCATC 1 cut(s) 159
BpiI GAAGAC 1 cut(s) 633
BplI GAGNNNNNCTC 2 cut(s) 459, 491
BpmI CTGGAG 3 cut(s) 461, 956, 1026
Bpu10I CCTNAGC 1 cut(s) 726
Bpu14I TTCGAA 1 cut(s) 383
BpuEI CTTGAG 3 cut(s) 503, 900, 1056
BpuMI CCSGG 2 cut(s) 504, 682
BsaHI GRCGYC 1 cut(s) 499
BsaJI CCNNGG 3 cut(s) 502, 681, 693
BsaWI WCCGGW 1 cut(s) 845
BsaXI ACNNNNNCTCC 2 cut(s) 177, 207
Bsc4I CCNNNNNNNGG 1 cut(s) 845
Bse1I ACTGG 1 cut(s) 746
Bse3DI GCAATG 1 cut(s) 546
BseAI TCCGGA 1 cut(s) 845
BseBI CCWGG 1 cut(s) 935
BseDI CCNNGG 3 cut(s) 502, 681, 693
BseGI GGATG 2 cut(s) 550, 723
BseLI CCNNNNNNNGG 1 cut(s) 845
BseMI GCAATG 1 cut(s) 546
BseMII CTCAG 5 cut(s) 444, 452, 717, 963, 1020
BseNI ACTGG 1 cut(s) 746
BseRI GAGGAG 1 cut(s) 480
BseSI GKGCMC 1 cut(s) 707
BseXI GCAGC 4 cut(s) 73, 134, 887, 890
BseYI CCCAGC 1 cut(s) 125
BsgI GTGCAG 1 cut(s) 1183
Bsh1236I CGCG 1 cut(s) 1115
BshFI GGCC 6 cut(s) 101, 316, 650, 660, 686, 895
BshNI GGYRCC 1 cut(s) 498
BsiHKAI GWGCWC 1 cut(s) 171
BsiHKCI CYCGRG 1 cut(s) 142
BsiSI CCGG 4 cut(s) 504, 681, 846, 1058
BslI CCNNNNNNNGG 1 cut(s) 845
BsnI GGCC 6 cut(s) 101, 316, 650, 660, 686, 895
BsoBI CYCGRG 1 cut(s) 142
Bsp119I TTCGAA 1 cut(s) 383
Bsp1286I GDGCHC 2 cut(s) 171, 707
Bsp13I TCCGGA 1 cut(s) 845
Bsp1407I TGTACA 2 cut(s) 33, 792
Bsp143I GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
BspACI CCGC 9 cut(s) 66, 69, 89, 92, 108, 701, 929, 1025, 1202
BspANI GGCC 6 cut(s) 101, 316, 650, 660, 686, 895
BspCNI CTCAG 5 cut(s) 445, 453, 718, 964, 1021
BspEI TCCGGA 1 cut(s) 845
BspFNI CGCG 1 cut(s) 1115
BspLI GGNNCC 5 cut(s) 45, 500, 685, 723, 1038
BspMI ACCTGC 1 cut(s) 621
BspPI GGATC 2 cut(s) 766, 958
BspQI GCTCTTC 1 cut(s) 1089
BspT104I TTCGAA 1 cut(s) 383
BspT107I GGYRCC 1 cut(s) 498
BsrBI CCGCTC 1 cut(s) 931
BsrDI GCAATG 1 cut(s) 546
BsrGI TGTACA 2 cut(s) 33, 792
BsrI ACTGG 1 cut(s) 746
BssECI CCNNGG 3 cut(s) 502, 681, 693
BssMI GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
BssNI GRCGYC 1 cut(s) 499
Bst2UI CCWGG 1 cut(s) 935
Bst4CI ACNGT 2 cut(s) 593, 1020
Bst6I CTCTTC 1 cut(s) 1089
BstACI GRCGYC 1 cut(s) 499
BstAUI TGTACA 2 cut(s) 33, 792
BstBI TTCGAA 1 cut(s) 383
BstC8I GCNNGC 4 cut(s) 103, 424, 573, 703
BstDEI CTNAG 5 cut(s) 453, 461, 726, 972, 1029
BstEII GGTNACC 1 cut(s) 470
BstF5I GGATG 2 cut(s) 550, 723
BstFNI CGCG 1 cut(s) 1115
BstH2I RGCGCY 1 cut(s) 502
BstHHI GCGC 2 cut(s) 422, 501
BstKTI GATC 8 cut(s) 346, 517, 761, 778, 922, 966, 987, 1169
BstMBI GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
BstMWI GCNNNNNNNGC 4 cut(s) 63, 98, 107, 875
BstNI CCWGG 1 cut(s) 935
BstNSI RCATGY 2 cut(s) 426, 575
BstPI GGTNACC 1 cut(s) 470
BstSCI CCNGG 3 cut(s) 502, 680, 933
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 707
BstUI CGCG 1 cut(s) 1115
BstV1I GCAGC 4 cut(s) 73, 134, 887, 890
BstV2I GAAGAC 1 cut(s) 633
BstX2I RGATCY 2 cut(s) 919, 963
BstYI RGATCY 2 cut(s) 919, 963
BsuRI GGCC 6 cut(s) 101, 316, 650, 660, 686, 895
BtrI CACGTC 1 cut(s) 790
BtsCI GGATG 2 cut(s) 550, 723
BveI ACCTGC 1 cut(s) 621
Cac8I GCNNGC 4 cut(s) 103, 424, 573, 703
CfoI GCGC 2 cut(s) 422, 501
Cfr13I GGNCC 2 cut(s) 43, 684
Csp6I GTAC 4 cut(s) 34, 280, 484, 793
CviAII CATG 6 cut(s) 395, 423, 572, 637, 688, 979
CviQI GTAC 4 cut(s) 34, 280, 484, 793
DdeI CTNAG 5 cut(s) 453, 461, 726, 972, 1029
DinI GGCGCC 1 cut(s) 500
DpnI GATC 8 cut(s) 345, 516, 760, 777, 921, 965, 986, 1168
DpnII GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 4 cut(s) 314, 648, 658, 893
Eam1104I CTCTTC 1 cut(s) 1089
EarI CTCTTC 1 cut(s) 1089
EciI GGCGGA 1 cut(s) 97
Eco47I GGWCC 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 142
Eco91I GGTNACC 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 470
EcoRII CCWGG 1 cut(s) 933
EgeI GGCGCC 1 cut(s) 500
EheI GGCGCC 1 cut(s) 500
FaeI CATG 6 cut(s) 398, 426, 575, 640, 691, 982
FatI CATG 6 cut(s) 394, 422, 571, 636, 687, 978
FauI CCCGC 2 cut(s) 85, 694
FauNDI CATATG 1 cut(s) 871
FblI GTMKAC 1 cut(s) 1192
Fnu4HI GCNGC 8 cut(s) 67, 70, 87, 90, 148, 876, 879, 1026
FokI GGATG 2 cut(s) 557, 730
Fsp4HI GCNGC 8 cut(s) 67, 70, 87, 90, 148, 876, 879, 1026
FspBI CTAG 1 cut(s) 666
GlaI GCGC 2 cut(s) 421, 500
GluI GCNGC 8 cut(s) 67, 70, 87, 90, 148, 876, 879, 1026
GsaI CCCAGC 1 cut(s) 129
GsuI CTGGAG 3 cut(s) 461, 956, 1026
HaeII RGCGCY 1 cut(s) 502
HaeIII GGCC 6 cut(s) 101, 316, 650, 660, 686, 895
HapII CCGG 4 cut(s) 504, 681, 846, 1058
HhaI GCGC 2 cut(s) 422, 501
Hin1I GRCGYC 1 cut(s) 499
Hin1II CATG 6 cut(s) 398, 426, 575, 640, 691, 982
Hin6I GCGC 2 cut(s) 420, 499
HinP1I GCGC 2 cut(s) 420, 499
HincII GTYRAC 1 cut(s) 1193
HindII GTYRAC 1 cut(s) 1193
HinfI GANTC 3 cut(s) 938, 1061, 1107
HpaII CCGG 4 cut(s) 504, 681, 846, 1058
HphI GGTGA 1 cut(s) 400
Hpy166II GTNNAC 5 cut(s) 36, 280, 793, 1111, 1193
Hpy188I TCNGA 7 cut(s) 135, 173, 462, 697, 968, 1066, 1129
Hpy8I GTNNAC 5 cut(s) 36, 280, 793, 1111, 1193
HpyAV CCTTC 9 cut(s) 34, 73, 91, 121, 170, 379, 444, 760, 1081
HpyCH4III ACNGT 2 cut(s) 593, 1020
HpyCH4IV ACGT 2 cut(s) 789, 1083
HpyCH4V TGCA 8 cut(s) 150, 539, 571, 575, 869, 875, 1164, 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 63, 98, 107, 875
HpyF3I CTNAG 5 cut(s) 453, 461, 726, 972, 1029
HpySE526I ACGT 2 cut(s) 789, 1083
Hsp92I GRCGYC 1 cut(s) 499
Hsp92II CATG 6 cut(s) 398, 426, 575, 640, 691, 982
HspAI GCGC 2 cut(s) 420, 499
KasI GGCGCC 1 cut(s) 498
Kpn2I TCCGGA 1 cut(s) 845
Kzo9I GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
LguI GCTCTTC 1 cut(s) 1089
LmnI GCTCC 5 cut(s) 83, 110, 185, 727, 936
Lsp1109I GCAGC 4 cut(s) 73, 134, 887, 890
LweI GCATC 1 cut(s) 159
MaeI CTAG 1 cut(s) 666
MaeII ACGT 2 cut(s) 789, 1083
MaeIII GTNAC 2 cut(s) 470, 593
MalI GATC 8 cut(s) 345, 516, 760, 777, 921, 965, 986, 1168
MbiI CCGCTC 1 cut(s) 931
MboI GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
MboII GAAGA 6 cut(s) 638, 683, 1103, 1106, 1168, 1171
MflI RGATCY 2 cut(s) 919, 963
MhlI GDGCHC 2 cut(s) 171, 707
MluCI AATT 4 cut(s) 116, 238, 306, 444
Mly113I GGCGCC 1 cut(s) 499
MlyI GAGTC 2 cut(s) 947, 1116
MmeI TCCRAC 3 cut(s) 991, 1014, 1026
MroI TCCGGA 1 cut(s) 845
MroXI GAANNNNTTC 1 cut(s) 357
MseI TTAA 1 cut(s) 1146
MslI CAYNNNNRTG 1 cut(s) 576
MspI CCGG 4 cut(s) 504, 681, 846, 1058
MspR9I CCNGG 3 cut(s) 504, 682, 935
MvaI CCWGG 1 cut(s) 935
MvnI CGCG 1 cut(s) 1115
MwoI GCNNNNNNNGC 4 cut(s) 63, 98, 107, 875
NarI GGCGCC 1 cut(s) 499
NciI CCSGG 2 cut(s) 504, 682
NdeI CATATG 1 cut(s) 871
NdeII GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
NlaIII CATG 6 cut(s) 398, 426, 575, 640, 691, 982
NlaIV GGNNCC 5 cut(s) 45, 500, 685, 723, 1038
NmuCI GTSAC 1 cut(s) 593
NspI RCATGY 2 cut(s) 426, 575
NspV TTCGAA 1 cut(s) 383
PaeI GCATGC 2 cut(s) 426, 575
PciSI GCTCTTC 1 cut(s) 1089
PdmI GAANNNNTTC 1 cut(s) 357
PfeI GAWTC 1 cut(s) 1061
PfoI TCCNGGA 1 cut(s) 933
PkrI GCNGC 8 cut(s) 68, 71, 88, 91, 149, 877, 880, 1027
PleI GAGTC 2 cut(s) 946, 1115
PluTI GGCGCC 1 cut(s) 502
PpsI GAGTC 2 cut(s) 946, 1115
PpuMI RGGWCCY 1 cut(s) 43
Psp5II RGGWCCY 1 cut(s) 43
Psp6I CCWGG 1 cut(s) 933
PspEI GGTNACC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 125
PspGI CCWGG 1 cut(s) 933
PspN4I GGNNCC 5 cut(s) 45, 500, 685, 723, 1038
PspPI GGNCC 2 cut(s) 43, 684
PspPPI RGGWCCY 1 cut(s) 43
PsuI RGATCY 2 cut(s) 919, 963
RsaI GTAC 4 cut(s) 35, 281, 485, 794
RsaNI GTAC 4 cut(s) 34, 280, 484, 793
RseI CAYNNNNRTG 1 cut(s) 576
SalI GTCGAC 1 cut(s) 1191
SapI GCTCTTC 1 cut(s) 1089
SaqAI TTAA 1 cut(s) 1146
SatI GCNGC 8 cut(s) 67, 70, 87, 90, 148, 876, 879, 1026
Sau3AI GATC 8 cut(s) 343, 514, 758, 775, 919, 963, 984, 1166
Sau96I GGNCC 2 cut(s) 43, 684
SchI GAGTC 2 cut(s) 947, 1116
ScrFI CCNGG 3 cut(s) 504, 682, 935
SduI GDGCHC 2 cut(s) 171, 707
SfaNI GCATC 1 cut(s) 159
SfcI CTRYAG 1 cut(s) 1197
SfoI GGCGCC 1 cut(s) 500
SfuI TTCGAA 1 cut(s) 383
SinI GGWCC 1 cut(s) 43
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 3 cut(s) 518, 915, 1071
SmoI CTYRAG 3 cut(s) 518, 915, 1071
SphI GCATGC 2 cut(s) 426, 575
Sse9I AATT 4 cut(s) 116, 238, 306, 444
SsiI CCGC 9 cut(s) 66, 69, 89, 92, 108, 701, 929, 1025, 1202
SspDI GGCGCC 1 cut(s) 498
SspI AATATT 1 cut(s) 403
SspMI CTAG 1 cut(s) 666
StyD4I CCNGG 3 cut(s) 502, 680, 933
TaaI ACNGT 2 cut(s) 593, 1020
TaiI ACGT 2 cut(s) 792, 1086
TaqI TCGA 7 cut(s) 27, 120, 383, 437, 553, 803, 1192
TasI AATT 4 cut(s) 116, 238, 306, 444
TatI WGTACW 2 cut(s) 33, 792
TauI GCSGC 4 cut(s) 69, 72, 92, 1028
TfiI GAWTC 1 cut(s) 1061
Tru1I TTAA 1 cut(s) 1146
Tru9I TTAA 1 cut(s) 1146
TseFI GTSAC 1 cut(s) 593
TseI GCWGC 4 cut(s) 86, 147, 875, 878
Tsp45I GTSAC 1 cut(s) 593
TspDTI ATGAA 3 cut(s) 13, 350, 967
TspGWI ACGGA 1 cut(s) 865
VpaK11BI GGWCC 1 cut(s) 43
XapI RAATTY 1 cut(s) 116
XceI RCATGY 2 cut(s) 426, 575
XmiI GTMKAC 1 cut(s) 1192
XmnI GAANNNNTTC 1 cut(s) 357
XspI CTAG 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.